NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F076199

Metagenome / Metatranscriptome Family F076199

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F076199
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 63 residues
Representative Sequence MIDQRKRIFAVNLWLTDLALTTASFFLAYRFRSLFELEGHTVMPVQTYFWHLAIILPTW
Number of Associated Samples 110
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 33.05 %
% of genes near scaffold ends (potentially truncated) 99.15 %
% of genes from short scaffolds (< 2000 bps) 96.61 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.610 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(14.407 % of family members)
Environment Ontology (ENVO) Unclassified
(32.203 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.085 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 50.57%    β-sheet: 0.00%    Coil/Unstructured: 49.43%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF07719TPR_2 15.25
PF00263Secretin 6.78
PF13181TPR_8 3.39
PF13414TPR_11 2.54
PF02771Acyl-CoA_dh_N 0.85
PF02562PhoH 0.85
PF13432TPR_16 0.85
PF07963N_methyl 0.85
PF00572Ribosomal_L13 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG0102Ribosomal protein L13Translation, ribosomal structure and biogenesis [J] 0.85
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 0.85
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 0.85
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.85


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.61 %
UnclassifiedrootN/A3.39 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886012|MBSR1b_contig_7404497All Organisms → cellular organisms → Bacteria → Acidobacteria874Open in IMG/M
2170459009|GA8DASG01D841LAll Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300002912|JGI25386J43895_10022165All Organisms → cellular organisms → Bacteria → Acidobacteria1870Open in IMG/M
3300004463|Ga0063356_105762035All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300004479|Ga0062595_101036588All Organisms → cellular organisms → Bacteria → Acidobacteria709Open in IMG/M
3300005093|Ga0062594_103036058All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300005186|Ga0066676_10392969All Organisms → cellular organisms → Bacteria → Acidobacteria934Open in IMG/M
3300005187|Ga0066675_11183085All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300005290|Ga0065712_10558691All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005331|Ga0070670_100003050All Organisms → cellular organisms → Bacteria → Acidobacteria13862Open in IMG/M
3300005332|Ga0066388_101640449Not Available1134Open in IMG/M
3300005333|Ga0070677_10692029All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300005333|Ga0070677_10883749All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300005336|Ga0070680_100311274All Organisms → cellular organisms → Bacteria → Acidobacteria1336Open in IMG/M
3300005441|Ga0070700_101449561All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300005446|Ga0066686_10691397All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300005450|Ga0066682_10827575All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300005451|Ga0066681_10831720All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300005455|Ga0070663_100643192All Organisms → cellular organisms → Bacteria → Acidobacteria896Open in IMG/M
3300005540|Ga0066697_10554020All Organisms → cellular organisms → Bacteria → Acidobacteria644Open in IMG/M
3300005555|Ga0066692_10350920All Organisms → cellular organisms → Bacteria → Acidobacteria936Open in IMG/M
3300005558|Ga0066698_10601272All Organisms → cellular organisms → Bacteria → Acidobacteria741Open in IMG/M
3300005559|Ga0066700_10108335All Organisms → cellular organisms → Bacteria1831Open in IMG/M
3300005576|Ga0066708_10253027All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1120Open in IMG/M
3300005586|Ga0066691_10700450All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300005617|Ga0068859_103026311All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300005713|Ga0066905_101555935All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300005713|Ga0066905_101946128All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300005719|Ga0068861_101626270All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300006034|Ga0066656_10828141All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300006237|Ga0097621_101347263All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300006797|Ga0066659_11719173All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300006852|Ga0075433_10953847All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300006871|Ga0075434_100547191All Organisms → cellular organisms → Bacteria → Acidobacteria1177Open in IMG/M
3300006881|Ga0068865_101178089All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300006904|Ga0075424_100977435All Organisms → cellular organisms → Bacteria → Acidobacteria903Open in IMG/M
3300006904|Ga0075424_102511134All Organisms → cellular organisms → Bacteria → Acidobacteria540Open in IMG/M
3300006931|Ga0097620_102131954All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300006969|Ga0075419_11444668All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300007076|Ga0075435_100913167All Organisms → cellular organisms → Bacteria → Acidobacteria766Open in IMG/M
3300009012|Ga0066710_100321376All Organisms → cellular organisms → Bacteria → Acidobacteria2276Open in IMG/M
3300009012|Ga0066710_100923702All Organisms → cellular organisms → Bacteria → Acidobacteria1344Open in IMG/M
3300009090|Ga0099827_10953063All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300009094|Ga0111539_10300981All Organisms → cellular organisms → Bacteria → Acidobacteria1867Open in IMG/M
3300009137|Ga0066709_101743504All Organisms → cellular organisms → Bacteria → Acidobacteria879Open in IMG/M
3300009137|Ga0066709_103609643All Organisms → cellular organisms → Bacteria → Acidobacteria561Open in IMG/M
3300009147|Ga0114129_10843817All Organisms → cellular organisms → Bacteria → Acidobacteria1165Open in IMG/M
3300009162|Ga0075423_12691349All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium544Open in IMG/M
3300009176|Ga0105242_12939000All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300009444|Ga0114945_10097559All Organisms → cellular organisms → Bacteria → Acidobacteria1649Open in IMG/M
3300009553|Ga0105249_13524749All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300010046|Ga0126384_11813043All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300010048|Ga0126373_12203938All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300010127|Ga0127489_1136557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium850Open in IMG/M
3300010301|Ga0134070_10045316All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1477Open in IMG/M
3300010304|Ga0134088_10638698All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300010321|Ga0134067_10379655All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300010329|Ga0134111_10247588All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300010358|Ga0126370_10798630All Organisms → cellular organisms → Bacteria → Acidobacteria841Open in IMG/M
3300010361|Ga0126378_11812946All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300010397|Ga0134124_12986862All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300010403|Ga0134123_11429176All Organisms → cellular organisms → Bacteria → Acidobacteria733Open in IMG/M
3300011333|Ga0127502_10142931All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300012200|Ga0137382_10873012All Organisms → cellular organisms → Bacteria → Acidobacteria649Open in IMG/M
3300012349|Ga0137387_10119658All Organisms → cellular organisms → Bacteria → Acidobacteria1855Open in IMG/M
3300012362|Ga0137361_11740482All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300012373|Ga0134042_1049077All Organisms → cellular organisms → Bacteria → Acidobacteria1305Open in IMG/M
3300012379|Ga0134058_1184285All Organisms → cellular organisms → Bacteria → Acidobacteria639Open in IMG/M
3300012396|Ga0134057_1087707All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300012410|Ga0134060_1032340All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300012917|Ga0137395_10907150All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300012957|Ga0164303_11152283All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300012972|Ga0134077_10047938All Organisms → cellular organisms → Bacteria → Acidobacteria1569Open in IMG/M
3300013297|Ga0157378_12364917All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300013306|Ga0163162_12524588All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300014154|Ga0134075_10124446All Organisms → cellular organisms → Bacteria → Acidobacteria1096Open in IMG/M
3300014745|Ga0157377_10293776All Organisms → cellular organisms → Bacteria → Acidobacteria1070Open in IMG/M
3300015371|Ga0132258_11908467All Organisms → cellular organisms → Bacteria → Acidobacteria1495Open in IMG/M
3300015373|Ga0132257_100218997All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2262Open in IMG/M
3300015374|Ga0132255_101893338All Organisms → cellular organisms → Bacteria → Acidobacteria907Open in IMG/M
3300016270|Ga0182036_10299381All Organisms → cellular organisms → Bacteria → Acidobacteria1223Open in IMG/M
3300016270|Ga0182036_11592258All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300016294|Ga0182041_12216563All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300016319|Ga0182033_10890380All Organisms → cellular organisms → Bacteria → Acidobacteria788Open in IMG/M
3300016341|Ga0182035_12143503All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300016371|Ga0182034_11004449All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium721Open in IMG/M
3300016387|Ga0182040_11505273All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300017656|Ga0134112_10100123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1088Open in IMG/M
3300018433|Ga0066667_10487965All Organisms → cellular organisms → Bacteria → Acidobacteria1013Open in IMG/M
3300018433|Ga0066667_11503717All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium595Open in IMG/M
3300018433|Ga0066667_12338840All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300018476|Ga0190274_13208565All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300019229|Ga0180116_1025297All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20517Open in IMG/M
3300019356|Ga0173481_10660681All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300019377|Ga0190264_11404942All Organisms → cellular organisms → Bacteria → Acidobacteria598Open in IMG/M
3300020009|Ga0193740_1052115Not Available636Open in IMG/M
3300021168|Ga0210406_10984678All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300021420|Ga0210394_10538448All Organisms → cellular organisms → Bacteria → Acidobacteria1027Open in IMG/M
3300021444|Ga0213878_10194224All Organisms → cellular organisms → Bacteria → Acidobacteria853Open in IMG/M
3300022563|Ga0212128_10700578All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300023261|Ga0247796_1091126All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300025898|Ga0207692_10974094All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300025901|Ga0207688_10563387All Organisms → cellular organisms → Bacteria → Acidobacteria716Open in IMG/M
3300025917|Ga0207660_10278109All Organisms → cellular organisms → Bacteria → Acidobacteria1328Open in IMG/M
3300025934|Ga0207686_11672851All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300026023|Ga0207677_11627258Not Available598Open in IMG/M
3300026314|Ga0209268_1049846All Organisms → cellular organisms → Bacteria → Acidobacteria1338Open in IMG/M
3300026327|Ga0209266_1032757All Organisms → cellular organisms → Bacteria → Acidobacteria2735Open in IMG/M
3300026537|Ga0209157_1320360All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300026547|Ga0209156_10138469All Organisms → cellular organisms → Bacteria → Acidobacteria1184Open in IMG/M
3300027018|Ga0208475_1034565All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300028138|Ga0247684_1093829All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300028876|Ga0307286_10217821All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300031720|Ga0307469_11985534All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300031858|Ga0310892_10809815All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300032157|Ga0315912_10631268Not Available853Open in IMG/M
3300032421|Ga0310812_10454259All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300034665|Ga0314787_042826All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil14.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil10.17%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.24%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.54%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.54%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs1.69%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.69%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.69%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.85%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.85%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.85%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.85%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.85%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010127Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019229Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020009Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s1EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300023261Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027018Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)EnvironmentalOpen in IMG/M
3300028138Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0888.000035002162886012Miscanthus RhizosphereMIDQRKRIFAVNLWLFDLFLTAASFLFAYIARVRLEVEGHTVMSFA
F47_128479002170459009Grass SoilMIDQRKRIFAVNLWVFDLFVTTASFFFAYGFRSLFELQGHTLMPVHFYLWLLAI
JGI25386J43895_1002216523300002912Grasslands SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILPTWALL
Ga0063356_10576203523300004463Arabidopsis Thaliana RhizosphereMIDQRKKIFAVNLWLLDLVLTAVSFFLAYRFRLFFELAGHTLMPVYIYL
Ga0062595_10103658813300004479SoilMIDQRKRIFAVNLWTFDLLLTTASFFLAYSFRLSAFVAYVMSLFQLEGHTVMPVGVYLWILAIILPTWAILLPLS
Ga0062594_10303605813300005093SoilMIDQRKRIFAVNLWLVDLFLTTASFYLAYRLRQLMDLKGYTVLPLPEYLW
Ga0066676_1039296923300005186SoilMIDQRKRIFAVNLWALDLLLTTASFFLAYRFRSLIELEGHTVMPVQVYLWLLAIILP
Ga0066675_1118308523300005187SoilMINQRKRIFAVNLWLTDLLLTTASFFLAYRFRLLFEVQGHTVMPIHVYFWLLAIILPTWALLLPLCRVYSEP
Ga0065712_1055869123300005290Miscanthus RhizosphereMIDQRKRIFAVSLWLLDLLLTLISFFLAYRLRLLVPIPGYTVMKVQVYLWLLPIILPTWAIILPLFRVYSDPAMRPLD
Ga0070670_10000305013300005331Switchgrass RhizosphereMIDQRKRIFAVSLWLLDLLLTLISFFLAYRLRLLVPIPGYTVMKVQVYLWLLPIILPTWAIILP
Ga0066388_10164044923300005332Tropical Forest SoilMIDQRKRIFAVNLLLLDLALTAASFFLAYALRLRFEVEGHTVMAVRVYVWLL
Ga0070677_1069202913300005333Miscanthus RhizosphereMIDQRKRIFAVSLWLVDLLLTLISFFLAYRLRLLINVPDHPVMKVQVYLWLLSVILPTWAVVLPLFRVYSEPAMRPL
Ga0070677_1088374913300005333Miscanthus RhizosphereMIDQRKRIFAVNLWFVDLALTTASFILAYCLRTFVDLQGYTVLPFREYLWLLAIILPVWAVMLPLF
Ga0070680_10031127413300005336Corn RhizosphereMIDQRKRIFAVKLWAFDLILTTASFFLAYWFRSLFDLEGRTLMALPVYLWLLAIILPTWALLLPLFRVYSEPT
Ga0070700_10144956113300005441Corn, Switchgrass And Miscanthus RhizosphereMIDQRKRIFAVNLWFVDLVLTTASFYLAYRLRQLVDLQGYTVLRLPEYLWLLAIILPVWA
Ga0066686_1069139723300005446SoilMIDQRKRIFAVNLWLADLAMTTASFFLAYRFRSLFDLSGHIVMPIQTYFWHIAIILP
Ga0066682_1082757513300005450SoilMIDQRKRIFAVNLWALDLILTTASFFLAYRFRLLIELEGHIVLPVQDY
Ga0066681_1083172013300005451SoilMIDQRKRIFAVNLWLTDLALTTASFFLAYRFRLLFELKGHTLMPVQVYFWLLAIIIPTWS
Ga0070663_10064319213300005455Corn RhizosphereMIDQRKRIFAVNLWVADLALTTASFILAYCLRTFVDLQGYTVLPFREYLWLLAIILPVWAVI
Ga0066697_1055402013300005540SoilMIDQRKRIFAVNLWLTDLALTTASFFLAYRFRLLFELKGHTVMPVQVYFWLLAIILPTWAFLLPLFRVYSEP
Ga0066692_1035092013300005555SoilMINQRKRIFAVNLWLTDLALTTASFFLAYRFRLLFEVKGHTVMPLPTYF
Ga0066698_1060127223300005558SoilMIDQRKRIFAVNLWLLDLVLTATSFLLAYRARLLFELEGHTLMPVQIYLWLLAIILPTWAVLLP
Ga0066700_1010833513300005559SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILPTWALLLPLFSVYSEP
Ga0066708_1025302713300005576SoilMIGQRKRIFAVNLWLADLALTAASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILPTWALLLPLF
Ga0066691_1070045013300005586SoilMIDQRKRIFAASQWITDLALTTASFFLAYRFRLLFEVEGHTLMSFRIYLWILAIILPTWAILLPAF
Ga0068859_10302631113300005617Switchgrass RhizosphereMIDQRKRIFAVNLWTFDLVLTTASFFLAYDFRSLFEVEGHTVMPVHVYLGLLAIILPTWAILLPLFRVYSEPTLQPLTQIW
Ga0066905_10155593523300005713Tropical Forest SoilMIDQRKRIFAFNVWLFDLLLTAASFLLAYQFRSLFELEGHTVMPVEIYLWLLAIILPTWAVLLPAFGVYS
Ga0066905_10194612823300005713Tropical Forest SoilMIDQRKRIFAVNLWICDLVLTTASFFLAYGFRSSESVERILGSLFELGGHTVMPVRVYMWQLAIILPTWALLLPL
Ga0068861_10162627013300005719Switchgrass RhizosphereMIDQRKRIFAVNLWFVDLALTTASFILAYCLRTFVDLQGYTVLPFREYLWLLAIILPVWAVMLPLFRV
Ga0066656_1082814123300006034SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILP
Ga0097621_10134726323300006237Miscanthus RhizosphereMIDQRKRIFAVNLWVFDLVLTTASFFSAYGFRTLFEVEGHTVMSLQIYL*
Ga0066659_1171917323300006797SoilMIDQRKRIFAVNLWLTDLALTTASFFLAYRFRLLFEVKGHTVMPVQVYLWLLAII
Ga0075433_1095384723300006852Populus RhizosphereMIDQRKRIFAVNLWICDLLLTTASFFLAYGFRSSESVEQVLGALLGGHTVMPVGVYVWQLAIILPTWALLLPLFRVYS
Ga0075434_10054719113300006871Populus RhizosphereMIDQRKKIFAVNLWIFDLLLTTFSFFLAYIVRSLIELEGHTVMPVRVYLWLLA
Ga0068865_10117808913300006881Miscanthus RhizosphereMIDQRKRIFAVSLWLVDLLLTLISFFLAYRLRLLINVPDHPVMKVQVYLWLLSVILPTWAVILPLFRVYSEPAMRPLDQI
Ga0075424_10097743513300006904Populus RhizosphereMIDQRKRIFAVNLWICDLCLTTASFFLAYGFRSSDMVERVLGSFFELGGHTVMPARVYLWHLAIILPTWA
Ga0075424_10251113413300006904Populus RhizosphereMIDQRKRIFAVNLWICDLLLTTASFFLAYGFRSSESVERVLGSLLGGHTVMSVGVYVWQLAIILPTWALLLPLF
Ga0097620_10213195423300006931Switchgrass RhizosphereMIDQRKRIFAVNLWIVDLVLTTASFILAYCLRTFVDLQGYTVLPFHEYLWLLAMLLPIWAFMLP
Ga0075419_1144466813300006969Populus RhizosphereMIDQRKRIFAVNLWLFDLFLTAASFLFAYIVRVRLEVEGHTVMSFAI
Ga0075435_10091316723300007076Populus RhizosphereMIDQRKRIFAVNLWICDLLLTTASFFLAYGFRSSESVERVLGSLLGGHTVMSVGVYVWQLAIILPTWALLLPLFRVYSEPTLSPLR
Ga0066710_10032137623300009012Grasslands SoilMIDQRKRIFAVNLWVLDLLLTTASFLLSYHIRTFFELKGHLVMEVGVYLWILAIILPTWAVLLPALHVYSEPSRPI
Ga0066710_10092370223300009012Grasslands SoilMIDQRKRIFAVNLWLTDLALTTASFFLAYRFRLLFELKGHTLMPVQVYFWLLAIILPTWGVLLPTI
Ga0099827_1095306313300009090Vadose Zone SoilMIDQRKRIFAVNLWALDLILTTESFFLAYRFRLLIELEGHIVLPVQDYLWLIAIILPTWAIL
Ga0111539_1030098113300009094Populus RhizosphereMQIHRSHLAMIDQRKRIFAVRVWVLDLVLTATSFLLAYYVRNLFEVEGHTLMDIKIYLWILAV
Ga0066709_10174350423300009137Grasslands SoilMIDQRKRIFAVNIWLLDLTLTTASFFLAYGLRLPFELEGHTVMAVRVYVRLLAIILPIWAVLLPLFRVYSELTLPPLHQILRL
Ga0066709_10360964313300009137Grasslands SoilMIDQRKRIFAVNLWFFDLVLTATSFFLAYRARLLFELEGHTLMPVQIYLWLLAIILPTWAVLLPLFRVYSEP
Ga0114129_1084381723300009147Populus RhizosphereMIDQRKRIFAVNLWICDLCLTTASFFLAYGFRSSDMVERVLGSFFELGGHTVMPARVYLWHLAIILPTWAVLLPLFRVYSEP
Ga0075423_1269134913300009162Populus RhizosphereMIDQRKKIFAVNLWIFDLLLTTFSFFLAYIVRSLIELEGHTVMPVRVYLWLLAIILPTWALLLPLFRVYSEPTLPPLTQ
Ga0105242_1293900013300009176Miscanthus RhizosphereMIDQRKRIFAFNVWLFDLLLTAASFLLAYRFRSLFELEGHTVMPVQIYLWLLAIILPTWA
Ga0114945_1009755923300009444Thermal SpringsMIDQRKRIFAVNLWLLDLLLTTSSFFLAYRIRLLIPLEGYMVMPIQIY
Ga0105249_1352474923300009553Switchgrass RhizosphereMIDQRKRIFAVSLWLIDLLLTLISFFFAYRLRLLIDVPDHPVMKVQVYLWLLSVILPTWAVILPLFRVYSEP
Ga0126384_1181304313300010046Tropical Forest SoilMIDQRKRIFAVNLWLVDLALTTASFFLAYAFRSVIELEGHTVMPLGIYLRL
Ga0126373_1220393823300010048Tropical Forest SoilMIDQRKRIFAVNLWVFDLVLTTASFFLAYQIRSLLTLENHIVMPIRVYLGLLAIILP
Ga0127489_113655723300010127Grasslands SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELKGHTVMPVQTYFWHLAII
Ga0134070_1004531623300010301Grasslands SoilMIGQRKGIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILPTWALLLPLFSVYSQPTLPPLNQIG
Ga0134088_1063869823300010304Grasslands SoilMIDQRKRIFAVNLWALDLILTTASFFLAYRFRLLIELEGHIVLPVQDYLWLIAIILPTWAILLP
Ga0134067_1037965523300010321Grasslands SoilMIDQRKRIFAVNLWLTDLALTTVSFFLAYRFRSLFELKGHTVMPVQTYFWHLAIILPTWALLLPVFSVYSEPTLP
Ga0134111_1024758823300010329Grasslands SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILPTWALLLPLFSVYSEPTLPPLN
Ga0126370_1079863023300010358Tropical Forest SoilMIDQRKRIFAVKIWILDLILTTASFFLAYQFRSLLKLEDHKLMPVQVYLWLLAIILPTLAVLLPLFNVY
Ga0126378_1181294613300010361Tropical Forest SoilMIDQRKRIFAVNLWIVDLILTTVSFFLAYQFRSLMVLEDHTLMPVQVYLW
Ga0134124_1298686213300010397Terrestrial SoilMIDQRKRIFAVNLWVLDLVLTAVSFLLAYYTRNLFDVEGHTLMEVGVYLWILAIILPTWA
Ga0134123_1142917613300010403Terrestrial SoilMIDQRKRIFAVNLWVFDLVLTTGIFFSAYGFRSLFQLEGHTVMSLQIYLRLLAI
Ga0127502_1014293113300011333SoilMIDQRRRIFAVKLWLLDLALTAASFFLAYRVRKWVQIEGYTVLSIPEYLWLLAIILPTWA
Ga0137382_1087301223300012200Vadose Zone SoilMIDQRKRIFAASQWITDLALTTASFFLAYRFRLLFEVEGHTLMSFRIYLWILAIILPTWAILLPAFQVYSEPTLP
Ga0137387_1011965813300012349Vadose Zone SoilMIDQRKRIFAVNLWFFDLVLTATSFFLAYRARLLFELEGHTLMPVQVYLWLLAFILLTWAVL
Ga0137361_1174048213300012362Vadose Zone SoilMIDQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPVQTYF
Ga0134042_104907723300012373Grasslands SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAI
Ga0134058_118428513300012379Grasslands SoilMIDQRKRIFAVNLWLADLAMTTASFFLAYRFRSLFDLSGHIVMPIQTYFWHIAIILPT
Ga0134057_108770713300012396Grasslands SoilMIDQRKRIFAASQWVTDLALTTASFFLAYRFRLLFEVEGHTLMSFRIYLWILAIILPT
Ga0134060_103234013300012410Grasslands SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYF
Ga0137395_1090715013300012917Vadose Zone SoilMINQRKRIFAVNLWLTDLALTTVSFFLAYRFRLLLEVKVHLVMPIHIYVW
Ga0164303_1115228323300012957SoilMIDQRKRIFAVNLWCVDLALTTASFYLAYRLRLLVDLQGYTVLPLREYLWLLAIIL
Ga0134077_1004793823300012972Grasslands SoilMIDQRKRIFAVNLWLTDLALTTASFFLAYRFRSLFELEGHTVMPVQTYFWHLAIILPTW
Ga0157378_1236491713300013297Miscanthus RhizosphereMINQRKRIFAVNLWLSDLLLTVASFFLAYNLRSSDFLESILRLLQMEKHTVMPVGVYLWHLVIILPTWAL
Ga0163162_1252458813300013306Switchgrass RhizosphereMIDQRKRIFAFNVWLFDLLLTAASFLLAYRFRSLFELEGHTVMP
Ga0134075_1012444623300014154Grasslands SoilMIDQRKRIFAVNLWLTDLALTTASFFLAYRFRSLFELKGHTVMPVQTYFWHLAIILPTWALLLP
Ga0157377_1029377613300014745Miscanthus RhizosphereMIDQRKRIFAVNLWFVDLALTTASFILAYCLRTFVDLQGYTVLPFREYLWLLAIIL
Ga0132258_1190846713300015371Arabidopsis RhizosphereMIDQRKRIFAFNVWLFDLLLTAASFLLAYRFRSLFELEGHTVMPV
Ga0132257_10021899713300015373Arabidopsis RhizosphereMIDQRKRIFAVNIWLMDLTLTAASFFLAYALRLQLDVEGHTVMAIRFYVWLLLIILPIWAILLPLFRVYSELTLPPLHQI
Ga0132255_10189333813300015374Arabidopsis RhizosphereMINQRKRIFAVNLWLSDLLLTVASFFLAYNLRSSDFLEGILGALFQMEKHTVMPVGVYIWHLAIILPTWALLLPLFRVYSEPTLPP
Ga0182036_1029938123300016270SoilMIDQRKRIFAVILWVSDLSLTTASFFLAYSLRSLFDLKDHTLMSIQVYL
Ga0182036_1159225823300016270SoilMIDQRKRIFAVNLWILDLILTTASFFLAYQFRSLLKLQNHTLMPVQVYL
Ga0182041_1221656323300016294SoilMIDQRKRIFAVNRWVVDLVLTTASFFLAYSLRSLFELKDHTLMPIQVYLWLLAIILPTWALLMPLFRVYT
Ga0182033_1089038013300016319SoilMIDQRKKIFAVNLWIFDLLLTTVSFFLAYVVRSLIELEGHTVMPVRVYLWLLAIILPTWALL
Ga0182035_1214350313300016341SoilMIDQRKTIFAVKSWVFDLILTTASFFLAYQFRSLFDLEDHILMPVRVYLWLLAIILPTWASLLPLFR
Ga0182034_1100444913300016371SoilMIDQRKKIFAVNLWIFDLLLTTVSFFLAYIVRSLIELEGHTVMPVRVYLWLLAIILPTWAMLLPLFRVYSEPTLPPLTQILR
Ga0182040_1150527323300016387SoilMIDQRKRIFAVSLWVLDLSLTTASFFLAYSLRSLFDLKDHTLMSVQVYLWVLAIIL
Ga0134112_1010012323300017656Grasslands SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILPTWALLLPLFSVYSEPTLPPLNQ
Ga0066667_1048796513300018433Grasslands SoilMIDQRKRIFAVNLWAFDLLLTTASFFLAYGFRLSAFVAYVMSLLQLEGHTVMSVGVYLWILAIILPTWAVL
Ga0066667_1150371713300018433Grasslands SoilMIDQRKRIFAVNLWAADLCLTTASFFLAYGFRSLFELEGHTLMSVRVYLWLLAIILPTWALLLPLFHVYSELTLPPLTHVL
Ga0066667_1233884023300018433Grasslands SoilMINQRKRIFAVNLWLTDLALTTVSFLLAYRFRLVFEVKGHMVMPIHIYFWVLAIILPTWGLLLPLFQVYSELTLPPL
Ga0190274_1320856513300018476SoilMIDQRKRIFAVSIWLLDLLLTMASFFLAYLLRVLFPIPGYTVMEVQVYLWLLVIILPTWAIILPL
Ga0180116_102529723300019229Groundwater SedimentMIDQRKRIFAVNLWIFDLVLTAASFLLAYRFRSLFELEGHIVMPVQIYLW
Ga0173481_1066068123300019356SoilMIDQRKRIFAVSLWLLDLLLTMVSFFLAYRLRLLFPIPGYTVMKVQVYLWILVIILPTWALILPLFRVY
Ga0190264_1140494213300019377SoilMIDQRKRIFVVNLWVFDLVLTTISFFLAYRLRSSFELEGHTVLPVQVYLWLLAIILPTWAVLLPLFRVYSEPGLRPVHQV
Ga0193740_105211523300020009SoilMIDQRKRIFAVNLWVLDLVLTTVSFYLAYRLRRLVDLEGYTILQLPEYL
Ga0210406_1098467823300021168SoilMIDQRKRIFAVNRWVVDLALTTASFFLAYWIRSLIPVEDHTLMSIHVYLWLLAIIL
Ga0210394_1053844823300021420SoilMIDQRKRIFAVNLWVFDLFLTTASFFFAYGFRSLFELQGHTLMPV
Ga0213878_1019422423300021444Bulk SoilMIDQRKRIFAVNLWVMDLALTTASFFLAYRFRLLFGDLEGHTVMAVHVYLWLLAIILPTWAFFLPL
Ga0212128_1070057813300022563Thermal SpringsMLKQRKQIFAFNLWLLDLALTAASFFAAYGLRNLFELEGHIVMPITIYLWSLLVILPTWAIL
Ga0247796_109112623300023261SoilMIDQRKRIFAVNLWFVDLALTTASFILAYCLRTFVDLQGYTVLPFREYL
Ga0207692_1097409423300025898Corn, Switchgrass And Miscanthus RhizosphereMIDQRKRIFAVNLWIVDLILTTASFFLAYQFRSLFELEGHTVMPVQVYLWLLAIILPTWAVLLPLFSVYLE
Ga0207688_1056338713300025901Corn, Switchgrass And Miscanthus RhizosphereMIDQRKRIFAVNLWTIDLVLTTTSFFLAYGFRSLFEVEGHTVMPVRVYLP
Ga0207660_1027810923300025917Corn RhizosphereMIDQRKRIFAVKLWAFDLILTTASFFLAYWFRSLFDLEGRTLMALPVYLWLLAIILPTWALLLP
Ga0207686_1167285113300025934Miscanthus RhizosphereMIDQRKRIFAVNLWVADLALTTASFILAYCLRTFVDLQGYTVLPSREYLWLL
Ga0207677_1162725823300026023Miscanthus RhizosphereMIDQRKRIFAVNLWLVGLLLTTASFYLAYRLRQILVLPGYTVLPLQDYLWLLAIILPVWA
Ga0209268_104984623300026314SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILPTWALLLPLFSVYSEPT
Ga0209266_103275713300026327SoilMIDQRKRIFAVNLWLADLAMTTASFFLAYRFRSLFDLSGHIVMPIQTYFWHIAIILPTWALLLPL
Ga0209157_132036013300026537SoilMIDQRKRIFAVELWIWDLLLTTASFFLAYSFRSLFELEGHTVMPVRVYLWLLAVIFPSWAVL
Ga0209156_1013846923300026547SoilMIGQRKRIFAVNLWLADLALTTASFFLAYRFRSLFELSGHIVMPIQTYFWHIAIILPTWA
Ga0208475_103456523300027018SoilMIDQRKRIFAVNLWILDLILTTASFFLAYELRSLFEVEGHTLMPVHVYLWLL
Ga0247684_109382923300028138SoilMIDQRKRIFAVNLWVFDLVLTTASFFLAYRFRSLFELEGHIVMPVQIYLWLLAIILPT
Ga0307286_1021782123300028876SoilMIDQRKRIFAVSLWLLDLLLTMISFFLAYRLRLLFPIPGYTVMKVQVYLWLLTIILPTWAIVLPL
Ga0307469_1198553423300031720Hardwood Forest SoilMIDQRKCIFAVNLWLTDLALTTASFFLAYRFRLLFELKGHTVMPV
Ga0310892_1080981513300031858SoilMIDQRKRIFAVNLWFVDLALTTASFILAYCLRTFVDLQGYTVLPFREYLWLL
Ga0315912_1063126823300032157SoilMIDQRKRIFAVSLLLLDLLLTMVSFFLAYRLRKLFPIPGYTVMEVQVYLWLLVIILPTWSIVL
Ga0310812_1045425923300032421SoilMIDQRKRIFAVNIWLMDLMLTAASFFLAYGLRLQLDVEGHTVMAIRFYVWLLLIILPIWAVLLPLFRVYSELTLP
Ga0314787_042826_1_1863300034665SoilMIDQRKRIFAVNLWFVDLVLTTASFYLAYRLRQLVDLQGYTVLRLPEYLWLLAIILPVWAVM


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.