Metagenome / Metatranscriptome Family F076136

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076136
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	120 residues
Representative Sequence	DPAEPAVFRGSIGVAQFSSDGQRMLILSGGIPNVFDSMRLIDVSPLYRTREPASEKFEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDAYEAVWKRFFPDERSK
Number of Associated Samples	105
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.39 %
% of genes near scaffold ends (potentially truncated)	93.22 %
% of genes from short scaffolds (< 2000 bps)	96.61 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.881 % of family members)
Environment Ontology (ENVO)	Unclassified (28.814 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.068 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.93% β-sheet: 14.48% Coil/Unstructured: 67.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00589	Phage_integrase	1.69
PF12127	FloA	1.69
PF13290	CHB_HEX_C_1	0.85
PF07690	MFS_1	0.85
PF13287	Fn3_assoc	0.85
PF12770	CHAT	0.85
PF13884	Peptidase_S74	0.85
PF08138	Sex_peptide	0.85
PF00916	Sulfate_transp	0.85
PF06832	BiPBP_C	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.85
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.85
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.85
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	98.31 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	98.31 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	95.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	95.76 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10070305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	887	Open in IMG/M
3300000650\|AP72_2010_repI_A1DRAFT_1010933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300000890\|JGI11643J12802_10920553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300000955\|JGI1027J12803_107353158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1263	Open in IMG/M
3300000956\|JGI10216J12902_110646626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1030	Open in IMG/M
3300003911\|JGI25405J52794_10087109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300004114\|Ga0062593_102965153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300004480\|Ga0062592_102321228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005093\|Ga0062594_101995695	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300005175\|Ga0066673_10464948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300005280\|Ga0065696_1040236	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300005289\|Ga0065704_10045779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300005294\|Ga0065705_11139367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300005332\|Ga0066388_100000197	All Organisms → cellular organisms → Bacteria	24629	Open in IMG/M
3300005332\|Ga0066388_103299997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	824	Open in IMG/M
3300005332\|Ga0066388_107759776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005434\|Ga0070709_11803332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300005435\|Ga0070714_102433646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300005455\|Ga0070663_102078386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300005530\|Ga0070679_101908570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005549\|Ga0070704_100074750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2473	Open in IMG/M
3300005549\|Ga0070704_102030550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005598\|Ga0066706_10711764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300005618\|Ga0068864_100929713	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	860	Open in IMG/M
3300005618\|Ga0068864_102625223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300005713\|Ga0066905_100142673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1712	Open in IMG/M
3300005764\|Ga0066903_101359123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1331	Open in IMG/M
3300005764\|Ga0066903_106120098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300005937\|Ga0081455_10252489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1289	Open in IMG/M
3300006358\|Ga0068871_101449858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300009551\|Ga0105238_11595270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300010038\|Ga0126315_10212169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1170	Open in IMG/M
3300010047\|Ga0126382_11350494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300010320\|Ga0134109_10403033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300010333\|Ga0134080_10251189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300010358\|Ga0126370_11231763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300010359\|Ga0126376_11336353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300010360\|Ga0126372_10508153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1134	Open in IMG/M
3300010373\|Ga0134128_11440118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300010375\|Ga0105239_12836879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300010999\|Ga0138505_100072028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300012201\|Ga0137365_10541211	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300012207\|Ga0137381_10925151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	753	Open in IMG/M
3300012208\|Ga0137376_10666927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	898	Open in IMG/M
3300012532\|Ga0137373_10934636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300012882\|Ga0157304_1115671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300012897\|Ga0157285_10364797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300012901\|Ga0157288_10066426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300012907\|Ga0157283_10100452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300012923\|Ga0137359_11652929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300012925\|Ga0137419_10594388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300012925\|Ga0137419_11441970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300012929\|Ga0137404_10935201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300012929\|Ga0137404_11844602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300012930\|Ga0137407_10338493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1383	Open in IMG/M
3300012957\|Ga0164303_10463603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300012960\|Ga0164301_10320066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1053	Open in IMG/M
3300012971\|Ga0126369_13652724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012985\|Ga0164308_12287502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300012987\|Ga0164307_11161251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300012987\|Ga0164307_11303202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300012988\|Ga0164306_11873777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300013306\|Ga0163162_11118467	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	893	Open in IMG/M
3300013307\|Ga0157372_13018633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300014745\|Ga0157377_10664769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300015200\|Ga0173480_10740420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300015200\|Ga0173480_10941543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300015201\|Ga0173478_10494669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300015359\|Ga0134085_10241813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M
3300015372\|Ga0132256_102559451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300015373\|Ga0132257_100468424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1541	Open in IMG/M
3300015373\|Ga0132257_103604225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300015373\|Ga0132257_104061358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300015374\|Ga0132255_101495510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1022	Open in IMG/M
3300015374\|Ga0132255_105946388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300016270\|Ga0182036_10863124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300016341\|Ga0182035_10506270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1032	Open in IMG/M
3300016357\|Ga0182032_10805893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	794	Open in IMG/M
3300018000\|Ga0184604_10077795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	983	Open in IMG/M
3300018051\|Ga0184620_10305376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300018054\|Ga0184621_10112862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	968	Open in IMG/M
3300018066\|Ga0184617_1275718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300018071\|Ga0184618_10345097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	634	Open in IMG/M
3300018433\|Ga0066667_11281462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300019870\|Ga0193746_1020644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300019879\|Ga0193723_1003527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5542	Open in IMG/M
3300019882\|Ga0193713_1116209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300019997\|Ga0193711_1014645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	989	Open in IMG/M
3300020000\|Ga0193692_1021777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1528	Open in IMG/M
3300020002\|Ga0193730_1050836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1196	Open in IMG/M
3300020010\|Ga0193749_1027991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1097	Open in IMG/M
3300021168\|Ga0210406_11220356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300022756\|Ga0222622_10024805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3112	Open in IMG/M
3300025930\|Ga0207701_10696413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	861	Open in IMG/M
3300025939\|Ga0207665_10143164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1707	Open in IMG/M
3300025972\|Ga0207668_10163465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1737	Open in IMG/M
3300026067\|Ga0207678_10707218	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300028380\|Ga0268265_11462951	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300028719\|Ga0307301_10104484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	899	Open in IMG/M
3300028782\|Ga0307306_10247450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300028793\|Ga0307299_10312159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300028799\|Ga0307284_10215569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300028811\|Ga0307292_10452560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300030847\|Ga0075405_12247416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300030945\|Ga0075373_11653018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	764	Open in IMG/M
3300031057\|Ga0170834_113381177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	862	Open in IMG/M
3300031170\|Ga0307498_10117632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	842	Open in IMG/M
3300031231\|Ga0170824_100221399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300031446\|Ga0170820_13331413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1230	Open in IMG/M
3300031469\|Ga0170819_10566544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300031719\|Ga0306917_11353148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300031740\|Ga0307468_100702927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300032001\|Ga0306922_11866900	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300032001\|Ga0306922_12106937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300032059\|Ga0318533_11310266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300032180\|Ga0307471_102565069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300032421\|Ga0310812_10313434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300033551\|Ga0247830_11112955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.36%
Host-Associated	Host-Associated	18.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.27%
Plants	Host-Associated → Plants	18.64%
Aquatic	Environmental → Aquatic	5.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.78%
Sediment	Environmental → Aquatic → Sediment	5.08%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.41%
Loam	Environmental → Terrestrial → Soil → Loam	11.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.39%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.08%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.85%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100703052	3300000597	Forest Soil	RREEVAEPAVFRGSFGIAQFSPDGQRMLILSGGLVNVFDTMRLIDVSTVYRRQDAAPEKFEEKPAPPWLADIAGAVSALDTSGDGSLLTLEDVRRKYPGSKAGDPYEAVWNRFFPDDRSAR*
AP72_2010_repI_A1DRAFT_10109331	3300000650	Forest Soil	HMEEPAEPVVFRGSMGIPQFSPDGKRLLILSGGIWNVFDTMRLIDVSQLYRPQEAPPEKFKEKTAPPWLSDIASAVSALDVGGDGSLLTLETVRKRHPESKAGDPYESVWKRFFPDDRSTQQR*
JGI11643J12802_109205531	3300000890	Soil	ERMQEPAEPVVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQKPAPEKFEDKPAPPWVADIASAVSALDTSGDGSLLTLETVRKRYPESKAGDAYQAVWKRFFPR*
JGI1027J12803_1073531583	3300000955	Soil	RRLVATSLYGRVNVAKAAGRQEPAEPVDFRGPIGIPQFSPDGQRLLILSGGLFNVFDSMRLVDVSQLYRTWEAAPENVGAKPAPPWLADIARSVSASDPGGDGSLMTLEDVRRKYPES
JGI10216J12902_1106466262	3300000956	Soil	SIGIPRFSSDGQRLLILSGGVWNVFDTMRLVDVSPLYRPQVAASEKFEEKPAPPWLTDLASAASAPDAGGDGSLLTLEIVRERFPESKAGDPYEAVWKRFFPDEPGAH*
JGI25405J52794_100871092	3300003911	Tabebuia Heterophylla Rhizosphere	AKTGQEPAEPVVFGGSVGIAQFSPDGQRLLILSGGVFNVFDRMRLIDVSPLYRTWEAVTETFEEKPAPPWLAEIGSAASAVDTNGDGSFLTLEAVRQRYPESKAGNAYEAVWKRFFPEEKNNGRLDTGR*
Ga0062593_1029651532	3300004114	Soil	AKSLYGRVEVTKGAGMKDPAEPVVFGGSIGIAQFSSDGQRLLILSGGIWNVFDRMRLVDVRPLYRTQAPVAEKFEDKPAPPWLGDIASAVSAIDTSGDGSLLTLETVRKRYPKPNAGDGYEAVWNRFFK*
Ga0062592_1023212281	3300004480	Soil	SLYGRVEVTKGVGMKDPAEPVVFGGSIGIAQFSSDGQRLLILSGGIWNVFDRMRLVDVRPLYRTQAPVAEKFEDKPAPPWLGDIASAVSAIDTSGDGSLLTLETVRKRYPKPNAGDGYEAVWNRFFK*
Ga0062594_1019956951	3300005093	Soil	AEPVVYRGSIGIPQFSSDGQRLLILSGAMFNLFDSVRLIDVSPLYRPREAAPEKVEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDPYEAVWKRFFPDDRTK*
Ga0066673_104649481	3300005175	Soil	AEPAIFGGSIGIAQFSSDGKRLLILSGGIWNVFDRIRLIDVSPLYRKQEAAPEKFEEKPVPPWLAEIAAAVSALDTTGEGALVTLETVRKRYPKSKAGDPYEAVWKRFFPDERSK*
Ga0065696_10402361	3300005280	Switchgrass Rhizosphere Bulk Soil	LVATSLYGRVEVAKGARMQDPAEPAVFRGSIGVAQFSSDGQRLLILSGGTWSALDSMRLIDVSPLYRKEEPPPIAFQQKPAPLWLADIAGAVSALDNTGDGSLMTLEDVRKKVSRKQSW*
Ga0065704_100457793	3300005289	Switchgrass Rhizosphere	GPAQLQYPAEPVVFRGSTGIPQFSRDGQRLLIVSGGLSSVLDSMRLVDVTPLCRTQAAIPKNFGEKPVPAWLADLASAVSAVDTTGEGSLLTLEAVRQKYPASKAGDPYEAVWKRFFPAEGGTDLR*
Ga0065705_111393672	3300005294	Switchgrass Rhizosphere	HRQEPAEPVTFRGSIGIPQFSSDGRRLLILSGATWNAFDSIRLIDLSPLYRERETALENFEGKPAPPWLADIASAVSAFDPSGDGTFITLEKVRKQYSQSKAGDPYEAVWKRFFPAERSK
Ga0066388_10000019713	3300005332	Tropical Forest Soil	MGIPQFSPDGQRSLILSGGLLNVYDTIRLIDVCPFYRPQEPACENFQPKPAPPWLAEIASAVGAFDVGSDGSLPTLEAVRKRHPESKAGDPYEAVWKRFFPDERTGQCG*
Ga0066388_1032999972	3300005332	Tropical Forest Soil	AQFSSDGKRLLILSGGIWNVFDRMRLIDVSPLYRTQEAAPKTFDDKPAPPWLADIASAVSASDPGQDGSLMTLEDVRKKYPDSKSGDAYEAVWKRFFPDESATLKR*
Ga0066388_1077597761	3300005332	Tropical Forest Soil	EPAVFGGSTGIAQFSSDGKRLLILSGGIWNVFDRMRLIDVSPLYRTQEAAPKTFDDKPAPPWLADIASAVSASDPGQDGSLMTLEDVRKKYPDSKSGNAYEAVWKRFFPDESVTLKQ*
Ga0070709_118033321	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MEEPAEPVVFRGSMGVPQFSPDGQRLLILSGGLWNVYDTIRLIDVSAFYRHQKPAAENFQPKPAPPWLAEIASAVSAFDVGGDGSLPTLEAVRKRHPKSKAGDPYESVWKRFFPDERSK*
Ga0070714_1024336462	3300005435	Agricultural Soil	YGRVEVAKSSQMQEPAEPAVFRGSIGVAQFSSDGQRMLILSGGMFNVFDSMRLIDVSPLYRTKEFAPEKVEEKPAPPWLPDIASAVSASDPSQDGSLMTLEDVRKKYPGSKAGDAYESVWKRFLPR*
Ga0070663_1020783862	3300005455	Corn Rhizosphere	KGARREEPAEPVVFRGSIGFPQFSLDGQRLLILSGAMFNVFDSVRLVDVSPLYRTQENAPKQLEAKPAPPWLADVASAVSASDPSQDGSLMTLEDVRKKYPESKAGDPYESVWKRFFPDEPQR*
Ga0070679_1019085701	3300005530	Corn Rhizosphere	YGRVEIDEVALSDEASERIIQYPAEPIVFRGSIGIPQFSPDEQRLLIVSGGTWNVFDSMRLIDVSPLYRKGRAAPGKLEEKPAPPWLADIASAVSALDTSGDGSLTTLEDVRKKYPRSKSGDAYESIWKRFFPDESQR*
Ga0070704_1000747505	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RGSIGIPQFSSDGQRLLILSGAMFNLFDSVRLIDVSPLYRPREAAPEKVEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDPYEAVWKRFFPDDRTK*
Ga0070704_1020305501	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	REKPAEPVVFRGTIGIPQFSSDGQRLLILSGGMFNVYDSLRLIDVSRLYRPQKPAPEKLEEKPAPPWLADIASAVSASDPSQDGSLTTLEDVRRKYPESKAGDPYEAVWKRFFPDEHTGH
Ga0066706_107117641	3300005598	Soil	VFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRPAPETFEDKPAPPWLADIASAVSALDTTGDGALLTLETVRKRYPESKAGDAYEAVWKRFFPDDPGTYQR*
Ga0068864_1009297131	3300005618	Switchgrass Rhizosphere	RMKEPAEPAIFGGSIGIAQFSSDGKRLLILSGGIWNVFDRIRLIDVSPLYRTQEAAPEKFEEKPVPPWLAEIAAAVSALDTTGEGTLVTLETVRKRYPKSKAGDPYQAVWKRFFPDERGK
Ga0068864_1026252232	3300005618	Switchgrass Rhizosphere	VAKGASREEPAEPVVFRGSIGFPQFSFDGQRLLILSGAMFNVFDSVRLVDVSPLYRTQENAPKQLEAKPAPPWLADVASAVSASDPSQDGSLMTLEDVRKKYPESKAGDPYESVWKRFFPDEPQR*
Ga0066905_1001426731	3300005713	Tropical Forest Soil	QEPAEPVVFRGPIGIPQFSSDGQRLLILSGMWNAFDSLRLIDVSPVYRAWEAAPEKFEEKPAPPWLADIAATVSALDTSGDGSLLTLETVRQRYPGSKAGDPYEAVWKRFFPDESATLKR
Ga0066903_1013591233	3300005764	Tropical Forest Soil	FRGSIGIPQFSSDGQRMLILSGGVFNVYDSLRLIDVSALYRPREPAPEKLEEKPAPPWLAEIASAVSASDPSGDGSLTTLEDVRRKFPGSKAGDPYEAVWNRFFPEEESNRQR*
Ga0066903_1061200982	3300005764	Tropical Forest Soil	HVARGEEREKPVEPVVFRGSVGIPQFSSDGQRLLILSGGAFNVYDSLRLIDVSPLYRLREGGSEKVEAKPAPPWLADIASAVSALDTTGDGSLTTLEDVRKKYPGSKAGDSYESVWKRFFPDDADTYQR*
Ga0081455_102524892	3300005937	Tabebuia Heterophylla Rhizosphere	IGVAQFSSDGQRMLILSGGIFNVFDSMRLIDVSPLYRKPDLAPQNFEEKPAPPWLADIASAVSASDPSQDGSLMTLEDVRKKYPGSKAGNAYAAVWKRFFPGEKNNERLETGR*
Ga0068871_1014498581	3300006358	Miscanthus Rhizosphere	AEPIVFRGSIGIPQFSPDEQRLLIVSGGTWNVFDSMRLIDVSPLYRKGRAARGKLEEKPAPPWLADIASAVSALDTSGDGSLTTLEDVRKKYPRSKSGDAYESIWKRFFPDESQR*
Ga0105238_115952701	3300009551	Corn Rhizosphere	QREKPAEPVVFRGSVGIPQFSLDGQRLLILSGAMFNVLDSMRLIDVSPLYRTQESAPEKLEGKPAPPWLAEIAAAVSALDTTGEGTLVTLETVRKRYPKSKAGDPYQAVWKRFFPDERGK
Ga0126315_102121692	3300010038	Serpentine Soil	QFSSDGQRLLILSGGLVNVFDRMRLIDVRPLYRKEKPAPEKFEDKPAPPWLAEIATAVSAPDTSGDGSLLTLEMVRKRYPESKAGDPYEAVWKRFFPDERSK*
Ga0126382_113504942	3300010047	Tropical Forest Soil	MKEPAEPAVFGGSIGIAQFSSDGKRLLILSGGIWNVFDRMRLIDVSPLYRAQTTAPEKFEERPAPPWLADIAAAVSALDTTGDGALLTLETVRARYPQSKAGDPYEAVWNRFFPDESATLQR*
Ga0134109_104030331	3300010320	Grasslands Soil	EVAKLTQMKEPAEPVVFRGSMGIPQFRLDGQRLLILSGGTWNVYDSLRLIDVSPLYRPRAEAAPENFKAKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPGSKAGDAYESVWKRFFPNEHGTQR*
Ga0134080_102511893	3300010333	Grasslands Soil	RGPIGIPQFSSDGQRLLILSGMWNAFDSLRLIDFSPVYRTWEAAPESLEEKPAPPWLADIAATVSALDTSGDGSLLTLETVRQRYPESKTGDPYEAVWKRFFPDDGGTQQR*
Ga0126370_112317632	3300010358	Tropical Forest Soil	DVAKGADREHPAEPVVFRGSVGIPQFSLDGQRLLILSGGTFNVYDSLRLIDVSPLYRPLKTATETLEEKPAPPWVAEIASAVSSSDPSQDGSLTTLEDVRKKYPGSKAGDPYESVWKRFFPDDSGSYPR*
Ga0126376_113363531	3300010359	Tropical Forest Soil	AVFRGSVGIPQFSFDRQRLLILSGPMFNVFDSMRLIDVSPLYREQKTPSEKLEEKPAPPWLAEIASAVSASDPSQDGSLRTLEDVRKKYPESKAGDAYESVWKRFFPDDQR*
Ga0126372_105081531	3300010360	Tropical Forest Soil	SMGIPQFSPDGQRSLILSGGLLNVYDTIRLIDVCPFYRPQEPACENFQPKPAPPWLAEIASAVGAFDVGSDGSLPTLEAVRKRHPESKAGDPYEAVWKRFFPDERTGQCG*
Ga0134128_114401183	3300010373	Terrestrial Soil	PQFSSDGQRLLILSGGVFNVYDSLRLIDVSPLYRPQGNTPEKLKEKPAPQWLADIASAVSALDTTGDGSLLTLETVKKKYPESKVGDPYELVWKRFFPDESKR*
Ga0105239_128368791	3300010375	Corn Rhizosphere	LLYGRVEVARNTQMQEPAEPVVFRGSIGIAQFSSDGKRLLILSGGIWNVFDRMRLVDVRPLYRTQAPVAEKFEDKPAPPWLGDIASAVSAIDTSGDGSLLTLETVRKRYPKPNAGDGYEAVWNRFFSNESAALQR*
Ga0138505_1000720281	3300010999	Soil	EPAEPDVLGGAMGIEQFSSDGQRMLILSGGMLNVFDSMRLIDVRPLYRTQEPAPEKFEDKPAPPWLADIASAVSALDTTSDGSLLTLETVRQRYPESKAGDPYEAVWKRFFPDDPGAYQR
Ga0137365_105412111	3300012201	Vadose Zone Soil	MKEPAEPVVFRGSMGIPQFRLDGQRLLILSGGTWNVYDSLRLIDVSPLYRPRAEAAPVRLEEKPAPPWLADIASAVSASDPSQDGSLMTLEDVRKKYPGSKAGDAYESVWKRFFPNEHGTQR*
Ga0137381_109251511	3300012207	Vadose Zone Soil	KSLYGRVEVAKGTRMQEPAEPAVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRPTTEKFEDKPAPQWLADIASAVGALDTTGDGALLTLEAVRQRYPGSKAGSPYEAVWKRFFPDERSK*
Ga0137376_106669271	3300012208	Vadose Zone Soil	MKEPAEPVVFRGSMGIPQFRLDGQRLLILSGGTWNVYDSLRLIDVSPLYRPRAEAAPENFKAKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPESKAGDAYEAVWKRFFPDQRLAH*
Ga0137373_109346362	3300012532	Vadose Zone Soil	IGIPQFSSDGQRLLILSGGTWNVFDSMRLFDVSPLYRPQEAAPENFEEKPAPPWLADIASAVSALDPGGDGSLLTLEAVRRKYPESKAGDAYESVWKRFFPEKKSNGRLETGRR*
Ga0157304_11156711	3300012882	Soil	MGIPQFSPDGKRLLILSGGLWNVYDTIRLIDVSPFYRRQESAAENFQPKSAPAWLAEIASAVSAFDLGGDGSLLTLETVRKRHPESKAGDPYEAVWKRFFPDDRSTQQR*
Ga0157285_103647971	3300012897	Soil	DEASERIIQYPAEPIVFRGSIGIPQFSPDEQRLLIVSGGTWSVFDSMRLVDLSPLYRTRRAAPGKFEGKRAPAWLADIASAVSALDTSGDGSLTTLEDVRKKYPRSKSGDAYESIWKRFFPDESQR*
Ga0157288_100664261	3300012901	Soil	GSIGIPQFSPDEQRLLIVSGGTWNVFDSMRLIDVSPLYRKGRAAPGKLEEKPAPPWLADIASAVSALDTSGDGSLTTLEDVRKKYPRSKSGDAYESIWKRFFPDESQR*
Ga0157283_101004522	3300012907	Soil	AEPVVFRGPIGIPQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTPQAAPEQFKQKPAPPWLADIASAVSASDPGQDGSLTTLEDVRKKYPESKAGDPYELVWKRFFPDESKR*
Ga0137359_116529291	3300012923	Vadose Zone Soil	PAEPVIFGGSIGVAQFRSDGQRMLILSGGIWNVFDRMRLIDVSPLYRTQEPAPEKFEEKPAPPWLVEIASAVSASDPSQDGSLTTLEDVRKKYPQSKAGDPYESVWKRFFPDDPSAYQR*
Ga0137419_105943882	3300012925	Vadose Zone Soil	MEEPAEPVVFRGSMGIPQFSPDGQRLLILSGGIWNVFDTMRLIDVSQLYRPQEAPPGKFKEKTAPPWLSDIASAVSALDVGGDGSLLTLETVRKRHPESKGGDPYEAVWKRFSPDDTSTQHR*
Ga0137419_114419702	3300012925	Vadose Zone Soil	RIHVAKGAQREKPAEPVVFRGSIGFSQFSLDGQRLLILSGAMFNVFDSVRLIDVSPLYRPREDAPKKFEEKPASQWLADIASAVSASDPSQDGSLMTLEDVRKKYPGSKAGDPYESVWKHFFPDESQR*
Ga0137404_109352013	3300012929	Vadose Zone Soil	SSVGIPLFSLDGQRLLILSGGTWNVYDSMRLIDVSPLYRPKEPAPEKFEEKPAPPWLADIASAVSASDPSQDGSLTTLEDVRKKYPESKAGDPFESVWKRFFPDDPSTYQR*
Ga0137404_118446021	3300012929	Vadose Zone Soil	PVVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLSRTQSPAPETFEDKPAPPWLADIASAVSALDTTGDGALLTLETVRKRYPESKAGDAYEAVWKRFFPDDPGTYQR*
Ga0137407_103384931	3300012930	Vadose Zone Soil	PAIFGGSIGIAQFSSDGKRLLILSGGIWNVFDRIRLIDVSRLYRTQEAAPEKFEEKPVPPWLAEIAAAVSALDTTGEGALVTLETVRKRYPKSKAGDPYEAVWKRFFPDERSK*
Ga0164303_104636031	3300012957	Soil	IAKGQPGQEEAEPAPFRGSMGIPQFSPDGRRLLILSGGLSNVYDTMRLIDVNPAYRPQEAVPKNFEEKAAPPWLAEIASAVSALDVDGDGSLRTLETVRNRHRESKVGNAYESVWKRFFPEEKSDGRLGTAR*
Ga0164301_103200661	3300012960	Soil	NGVQSEPPAQPVFVRGSIGFRQFSLDGQRLLILSGAMFNVFDSVRLIDVSPLYRTPQDASKKLEAKPAPPWLADVASAVSASDPSQDGSLMTLEDVRSKYRGSKAGDPYEPVWKHFFPDDSKR*
Ga0126369_136527241	3300012971	Tropical Forest Soil	IFVGSIGIAQFSADGKRLLILSGGIWNVFDRMRLIDVSPLYRTQEAVPEKFEEKPVPPWLADIATAVSALDTTGDGALLTLEMVRQRYPESKAGDAYEAVWNRFFPDDRGAR*
Ga0164308_122875022	3300012985	Soil	GSMGIPQFSPDGRRLLILSGGLSNVYDTMRLIDVNPAYRPQEAVPKNFEEKAAPPWLAEIASAVSALDVDGDGSLRTLETVRNRHRESKVGNAYESVWKRFFPEEKSDGRLGTAR*
Ga0164307_111612512	3300012987	Soil	LYGRVHVAKGVQREKPAEPVVFRGSIGFPQFSLDGQRLLILSGAMFNVFDSVRLIDVSPLYRTPQDASKKLEAKPAPPWLADVASAVSASDPSQDGSLMTLEDVRNKYRGSKAGDPYEPVWKHFFPDDSKR*
Ga0164307_113032022	3300012987	Soil	RGSIGIPQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTPQAAPEQFKQKPAPPWLADIASAVSASDPGQDGSLTTLEDVRKKYPESKAGDPYELVWKRFFPDESKR*
Ga0164306_118737771	3300012988	Soil	RVEVAKGTRMKEPAEPAIFGGSIGIAQFSSDGKRLLILSGGIWNVFDRMRLIDVSPLYRPQGNTPEKLKEKPAPQWLTDIATAVSASDPSQDGSLMTLEDVRSKYPGSKAGDPYEPVWKHFFPDDSKR*
Ga0163162_111184671	3300013306	Switchgrass Rhizosphere	IGIPQFSSDGQRLLILSGAMFNLCDSVRLIDVSPLYRPREAAPEKVEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDPYEAVWKRFFPDDRTK*
Ga0157372_130186332	3300013307	Corn Rhizosphere	LYGRVHVAKGARREEPAEPVVFRGSIGFPQFSLDGQRLLILSGAMFNVFDSVRLVDVSPLYRTQENAPKQLEAKPAPPWLADVASAVSASDPSQDGSLMTLEDVRKKYPESKAGDPYESVWKRFFPDEPQR*
Ga0157377_106647691	3300014745	Miscanthus Rhizosphere	KGTRMKEPAEPAIFGGSIGIAQFSSDGKRLLILSGGIWNVFDRIRLIDVSPLYRTQEAAPEKFEEKPVPAGLAEIAAAVSALDTTGEGTLVTLETVRKRYPKSKAGDPYQAVWKRFFPDERGK*
Ga0173480_107404201	3300015200	Soil	VVFRGSMGIPQFSPDGKRLLILSGGLWNVYDTIRLIDVSPFYRRQESAAENFQPKSAPTWLAEIASAVSAFDLGGDGSLLTLETVRKRHPESKAGDPYEAVWKRFFPDDRSTQQR*
Ga0173480_109415431	3300015200	Soil	GSIGIPQFSPDEQRLLIVSGGTWNVFDSMRLIDVNPLYRKGRAAPGKLEEKPAPPWLADIASAVSALDTSGDGSLTTLEDVRKKYPRSKSGDAYESIWKRFFPDESQR*
Ga0173478_104946691	3300015201	Soil	EPAEPVVFRGSMGIPQFSPDGKRLLILSGGLWNVYDTIRLIDVSPFYRRQESAAENFQPKSAPTWLAEIASAVSAFDLGGDGSLLTLETVRKRHPESKAGDPYEAVWKRFFPDDRSTQQR
Ga0134085_102418131	3300015359	Grasslands Soil	MKEPAEPVVFRGSMGIPQFRLDGQRLLILSGGTWNVYDSLRLIDVSPLYRPRAEAAPENFKAKPAPPWLADIARAASAADPNQDGSLMTLEDVRRKYPGSKAGDAYESVWKRFFPNEHGTQR*
Ga0132256_1025594512	3300015372	Arabidopsis Rhizosphere	MQDPAEPVVFRGSTGIPQFSLDGQRLLILSGAVWNVFDSMRLIDVSRLHRPQERAPEKLEEKPAPPWLADIASAVSASDPSQDGSLTTLEDVRRKYPESKAGDPYESVWKRFFPDERSK*
Ga0132257_1004684244	3300015373	Arabidopsis Rhizosphere	KGAQREKPAEPVVFRGSIGFPQFSLDGQRLLILSGAMFNVFDSMRLIDVNPLYRPRESPSKGLEAKPAPPWLADIASAVSASDPSQDGSLMTLEDVRKKYPESKAGDPYELVWKRFFPGESKR*
Ga0132257_1036042251	3300015373	Arabidopsis Rhizosphere	VVFGGSVGIAQFSPDGQRLLILSGGVFNVFDRMRLIDVSPLYRTWEAVTETFEEKPAPSWLAEIGSAASAVDTNSDGSFVTLEAVRQRYPESKAGNAYEAVWKRFFPEEKNNGRLDTGR*
Ga0132257_1040613582	3300015373	Arabidopsis Rhizosphere	FRGSIGIPQFSLDGQRLLILSGGMWNVFDSMRLIDVNPVYRPHKSAAQNLEAKPAPQWLADIASAVSASDPGQDGSLMTLEDVRKKYPESKAGDAYEAVWKRFFPDQSARLQR*
Ga0132255_1014955101	3300015374	Arabidopsis Rhizosphere	IGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRPAPEAFEDKPAPPWLADIASAVSALDTTGDGALLTLETVRKRYPESKAGDPYEAVWNRFFQDKRSR*
Ga0132255_1059463882	3300015374	Arabidopsis Rhizosphere	RGSIGYPQFSLDGQRLLILSGAMFNVFDSMRLIDVNPLYRPRESPSKGLEAKPAPPWLADIASAVSASDPSQDGSLMTLEDVRKKYPESKAGDPYELVWKRFFPGESKR*
Ga0182036_108631241	3300016270	Soil	RMQEPAEPAVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQKTAPENFEDKPAPRWLADIAAAVSALDTTGDGAMLTLETVRQRYPESKAGDPYEAVWNRFFPNGAATVQR
Ga0182035_105062701	3300016341	Soil	EVARGTRMKEPAEPAVFGGSIGIAQFSSDGKRLLILSGGIWNVFDRMRLIDVSPLYRTQKAVPEQFDEKPVPPWLADIAAAVSALDTTGDGALLTLETVRTRYPKSTAGDPYEAVWNRFFPDESATLQQ
Ga0182032_108058931	3300016357	Soil	IGIPQFSSDGQRLLILSAGVSNVYDSMRLIAVSALYRLRKATPEKLEEKPAPPWLAEIAGAASASDPSQDGSLVTLEDVRRKYPESKAGDPYESVWKRFFPDERTEH
Ga0184604_100777953	3300018000	Groundwater Sediment	SIGIPQFSSDGQRLLILSGATWNAFDSIRLIDLSPLYRQRETALENFEGKPAPPWLADIASAVSAFDPSGDGTFITLEKVRKQYSQSKAGDPYEAVWKRFFPAERSK
Ga0184620_103053761	3300018051	Groundwater Sediment	SLYGRVEVAKGERMQEPAEPVVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQKPAPEKFEDKPAPPWVADIASAVSALDTSGDGSLLTLETVRKRYPESKAGDAYEAVWKRFFPDDPGTYQR
Ga0184621_101128621	3300018054	Groundwater Sediment	QRQEPAEPVVFRGSMGIPQFSLDGQRLLILSGGTWNVYDSLRLIDVSPLYRRRRAAPEKLEEKPAPPWLAELATAVSASDPSQDGSLTTLEDVRKKYPGSKAGDAYEAVWKRFFPDERSK
Ga0184617_12757181	3300018066	Groundwater Sediment	CNNTRIVAISLYGRVQMALQASGQVQYPAEFVLFRGPIGIPQFSPDGRRMLILSGGIGNVLDTMRLIDISPICRIQESAPERLEEKPAPAWLAEIASAASALDTSGDGSLVTLEAVRQKYPASKAGDPYEAVWKRFFPDERSK
Ga0184618_103450971	3300018071	Groundwater Sediment	VAKGAQMQDPAEPAVFRGSIGVAQFSSDGQRMLILSGGIPNVFDSMRLIDVSPLYRTREPASEKFEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDAYEAVWKRFFPDERSK
Ga0066667_112814621	3300018433	Grasslands Soil	RGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRPTTEKFEDKPTPQWLADIASAVGALDTTGDGALLTLEAVRQRYPGGKGGSPYEAVWKRFFPDERSK
Ga0193746_10206442	3300019870	Soil	IGIAQFSSDGRRLLILSGGIWNVFDRMRLIDVSPLYRTQETAPENFEEKPVPPWLADIAAAVSALDTTGDGALLTLETVRKRYPESKAGDAYEAVWKRFFPDDPGTYQR
Ga0193723_10035271	3300019879	Soil	GSIGIAQFSSDGQRMLILSGGMLNVFDRMRLIDVSPLYRTQRPAPETFEDKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPESKAGDAYEAVWKRFFPDDPGTYQR
Ga0193713_11162092	3300019882	Soil	SAQRQEPAEPVVFRGSMGIPQFSLDGQRLLILSGGTWNVYDSLRLIDVSPLYRPREAAPEKLEEKPAPPWLADIASAVSASDPSQDGSLITLEDVRRKYPERKTGDAYEAVWKRFFPESGGRLQTGR
Ga0193711_10146451	3300019997	Soil	DPAEPAVFRGSIGVAQFSSDGQRMLILSGGIPNVFDSMRLIDVSPLYRTREPASEKFEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDAYEAVWKRFFPDERSK
Ga0193692_10217773	3300020000	Soil	VAKGTRMQEPAEPAVFGGSIGIAQFSSDGRRLLILSGGIWNVFDRMRLIDVSPLYRTQEAAPEKFEEKPVPPWLAEIAAAVSALDTTGEGALVTLETVRKRYPKSKAGDPYEAVWKRFFPDDPGTYQR
Ga0193730_10508361	3300020002	Soil	TGTRMKEPAEPVVFGGSIGIAQFSSDGQRMLILSGGMLNVFDRMRLIDVSPLYRTQRPAPERFEDKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPESKAGDAYEAVWKRFFPDDPGTYQR
Ga0193749_10279913	3300020010	Soil	PAEPVVFGGSIGIAQFSSDGQRMLILSGGMLNVFDRMRLIDVGPLYRTQRPAPERFEDKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPESKAGDAYESVWKRFFPR
Ga0210406_112203561	3300021168	Soil	RVEVAKGERMQEPAEPVVFRGSIGVVHFSSNGQRMLVLSGGMSNLFDTMRLIDVSPLYRTQKLASEKFEEKPVPPWLADIASAVSALDTSGDGALLTLETVRERYPESKAGNAYESVWKRFFSEERAGR
Ga0222622_100248051	3300022756	Groundwater Sediment	YGRVHVAKGAQREKPAEPVVFRGSIGFPQFSLDGQRLLILSGAMFNVFDSVRLIDVKPLYRPQEAPTKKLEAKPAPPWLADIASAVSASDPSQDGSLMTLEDVRKKYPGSKAGDPYELVWKRFFPDESKR
Ga0207701_106964132	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DPAEPVVFRGSIGIPQFSLDGHRMLILSGTTLNLFDSLRLIDVSQLYRPREAAPEKLEDKPAPPWLAEIAAAVSASDPSQDGSLITLEDVREKYPGSKAGDPYEAVWKRFFPDQRTAY
Ga0207665_101431641	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	SRTGSGILTFNESEIVFPSIFGGSIGVAQFSLDGQRLLILSGGTWNVFDRMRLIDVSPLYRTKEPPPIKFQEKSVPPWLADLAGAVSALDSTGEGSLLTLQTVKNRYPKHEAGDPYEAVWKHFFTGER
Ga0207668_101634651	3300025972	Switchgrass Rhizosphere	NRQEPAEPVVYRGSIGIPQFSSDGQRLLILSGAMFNLFDSVRLIDVSPLYRPREAAPEKVEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDPYEAVWKRFFPDDRTK
Ga0207678_107072181	3300026067	Corn Rhizosphere	KGARREEPAEPVVFRGSIGFPQFSLDGQRLLILSGAMFNVFDSVRLVDVSPLYRTQENAPKQLEAKPAPPWLADVASAVSASDPSQDGSLMTLEDVRKKYPESKAGDPYESVWKRFFPDEPQR
Ga0268265_114629511	3300028380	Switchgrass Rhizosphere	RGSIGIPQFSSDGQRLLILSGAMFNVLDSMRLIDVSPLYRTQESAPEKLEGKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDPYEAVWKRFFPDDRTK
Ga0307301_101044843	3300028719	Soil	ATGTRMKEPAEPVVFGGSIGIAQFSSDGQRMLILSGGMLNVFDRMRLIDVSPLYRTQRPAPERFEDKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPESKAGDAYEAVWKRFFPDDPGTYQR
Ga0307306_102474502	3300028782	Soil	PVVFRGSIGFPQFSLDGQRLLILSGATFNVFDSVRLIDVSPLYRTPQDASKKLEAKPAPPWLADVASAVSASDPSQDGSLMTLEDVRSKYPGSKAGDPYEPVWKHFFPDESKR
Ga0307299_103121591	3300028793	Soil	GVAQFSSDGRRMLILSGGIPNVFDSMRLIDVSPLYRTREPASEKFEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPGSKAGDAYEAVWKRFFPDERSK
Ga0307284_102155691	3300028799	Soil	RVHVAKGLQREKPAEPVVFRGSIGFPQFSLDGQRLLILSGATFNVFDSVRLIDVSPLYRTPQDASKKLEAKPAPPWLADVASAVSASDPSQDGSLMTLEDVRSKYPGSKAGDPYEPVWKHFFPDESKR
Ga0307292_104525602	3300028811	Soil	GTRMKEPAEPVVFGGSIGIAQFSSDGQRMLILSGGMLNVFDRMRLIDVSPLYRTQRPAPERFEDKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPESKAGDAYEAVWKRFFPDDPGTYQR
Ga0075405_122474163	3300030847	Soil	RVEVAKGAQMQEPAEPAVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRLAPENFEDKPAPQWLADTASAVSALDTSGDGSLLTLETVRQRYPESKAGDAYQAVWKRFFPR
Ga0075373_116530181	3300030945	Soil	VEVAKGERMQEPAEPVVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRLAPENFEDKPAPQWLADTASAVSALDTSGDGSLLTLETVRQRYPESKAGDAYQAVWKRFFPR
Ga0170834_1133811771	3300031057	Forest Soil	QERAEPVVFRGSIGIAQFSSDGQRLLILSGGMWNVFDTMRLIDVSPVYRRQEAAPETFEQKPAPPWLSDIASAVSALDTSGDGSLLTLETVRNRYPGSKAGDAYEAVWKRFFPDEKSNGRLKTGR
Ga0307498_101176321	3300031170	Soil	GRIHVAKGAQREKPAEPVVFRGSVGIPQFSLDGQRLLILSGGMLNVYDSLRLIDVSRLYRPQKPAPQKLEEKPAPPWLADIASAVSASDPSQDGSLMTLEDVRSKYPGSKAGDPYESVWKHFFPDDSKR
Ga0170824_1002213992	3300031231	Forest Soil	AKSLYGRVEVAKGERLQEPAEPAVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRLAPEKFEDKPAPQWLADIASAVSALDTTGDGSLLTLETVRQRYPESKAGDAYQAVWKRFFPR
Ga0170820_133314131	3300031446	Forest Soil	GIPQFSSDGQRLLILSGGMWNVYDSLRLIDVSPLYRTQEAAPEKFEEKPAPPWLADIASAVSAADPGQDGSLMTLERVRRRYPESKAGDAYESVWKRFFPDEPGTHQR
Ga0170819_105665441	3300031469	Forest Soil	EVAKGERLQEPAEPAVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRLAPEKFEDKPAPQWLADIASAVSALDTTGDGSLLTLETVRQRYPESKAGDAYQAVWKRFFPR
Ga0306917_113531481	3300031719	Soil	RVHVARGADREKPAEPVIFRGSIGIPQFSSDGQRLLILSGGVSNVYDSMRLIDVSALYRLRKATPEKLEEKPAPPWLAEIAGAASASDPSQDGSLVTLEDVRRKYPESKAGDPYESVWKRFFPDERTEH
Ga0307468_1007029271	3300031740	Hardwood Forest Soil	AKGERLQEPAEPAVFRGSIGVAQFSSDGQRMLILSGGIWNVFDSMRLIDVSPLYRTQRLAPEKFEDKPAPQWLADIASAVSALDTTGDGSLLTLETVRQRYPESKAGDAYQAVWKRFFPR
Ga0306922_118669001	3300032001	Soil	VAKGTRIDAPAEPAVFGGSIGTAQFSYDGKRLLILSGGIWNVFDRMRLIDISPLYRTQEAAPETFEDKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPQSKAGDPYEAVWNRFFPDESATLQ
Ga0306922_121069372	3300032001	Soil	KPAEPVVFRGSIGIPQFSSDGQRILILSGGVFNVYDSLRLIDVSPLYRLQEGGSEKFEEKPAPPWLADIASAVSASDPRQDGSLTTLEDVRKKYPGSKAGNPYESVWKRFFQDDAGAYQR
Ga0318533_113102661	3300032059	Soil	VQVARGARMQEPAEPVVFRGSIGIPKFSFDGKRLLILSGGTTDAFDTMRLVDVTPLYRTRETASEEFKATPAPPWLVDIASSVSALDPSEDGSLITLEDVRQWYPGSKAGHAYESVWKRFFPEESSGH
Ga0307471_1025650691	3300032180	Hardwood Forest Soil	EVAKGTRMKEPAEPAVFGGSIGIAQFSSDGKRLLILSGGIWNVFDRMRLIDVSPLYRTQRPAPETFEDRPAPPWLADIAAAVSALDTTGDGSLLTLETVRKRYPKSKAGDPYEAVWRRFFPDERSE
Ga0310812_103134341	3300032421	Soil	VFRGSVGIPQFSSDGQRLLILSGSMFNLFDSMRLIDVSPLYRQRQTQPVKLEEKPAPPWLAEIASAVSASDPSQDGSLTTLEDVRKKYPESKSGDPYELVWKRFFPE
Ga0247830_111129551	3300033551	Soil	LYQRVEVAKGARMQDLAEPVVFRGSTGIPQFSLDGQRLLILSGGMFNVYDSLRLIDVSRLYRPREAAPKTFKAKPAPPWLADIASAVSASDPSQDGSLMTLEDVRRKYPESKAGDPYQSVWKHFFPDDPGTYPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076136

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences