Metagenome / Metatranscriptome Family F076056

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076056
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	122 residues
Representative Sequence	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Number of Associated Samples	106
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.78 %
% of genes near scaffold ends (potentially truncated)	41.53 %
% of genes from short scaffolds (< 2000 bps)	72.03 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.915 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (7.627 % of family members)
Environment Ontology (ENVO)	Unclassified (41.525 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.00% β-sheet: 8.80% Coil/Unstructured: 63.20%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00753	Lactamase_B	25.42
PF06144	DNA_pol3_delta	15.25
PF11752	DUF3309	5.08
PF02518	HATPase_c	4.24
PF04390	LptE	3.39
PF08264	Anticodon_1	1.69
PF07813	LTXXQ	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	15.25
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	15.25
COG2980	Outer membrane lipoprotein LptE/RlpB (LPS assembly)	Cell wall/membrane/envelope biogenesis [M]	3.39
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.39

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.92 %
Unclassified	root	N/A	5.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.92 %
Unclassified	root	N/A	5.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.92 %
Unclassified	root	N/A	5.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.75 %
Unclassified	root	N/A	5.08 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	68.64 %
Unclassified	root	N/A	5.08 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	61.86 %
Unclassified	root	N/A	5.08 %

Name	Rank	Taxonomy	Distribution
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	5.93 %
Unclassified	root	N/A	5.08 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.54 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	5.93 %
Unclassified	root	N/A	5.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	5.93 %
Unclassified	root	N/A	5.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.08 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	4.24 %
Pseudolabrys sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005148\|Ga0066819_1002873	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005165\|Ga0066869_10001184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2840	Open in IMG/M
3300005168\|Ga0066809_10038073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1041	Open in IMG/M
3300005169\|Ga0066810_10008889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1435	Open in IMG/M
3300005329\|Ga0070683_100073744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3187	Open in IMG/M
3300005330\|Ga0070690_100212792	All Organisms → cellular organisms → Bacteria → Proteobacteria	1351	Open in IMG/M
3300005332\|Ga0066388_100599475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1724	Open in IMG/M
3300005332\|Ga0066388_101005112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1397	Open in IMG/M
3300005332\|Ga0066388_101546504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1164	Open in IMG/M
3300005332\|Ga0066388_103734679	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300005335\|Ga0070666_10097578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2023	Open in IMG/M
3300005337\|Ga0070682_100090787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1998	Open in IMG/M
3300005339\|Ga0070660_100037369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3681	Open in IMG/M
3300005340\|Ga0070689_101318082	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300005343\|Ga0070687_101020842	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005347\|Ga0070668_100441991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1116	Open in IMG/M
3300005367\|Ga0070667_100024652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4998	Open in IMG/M
3300005455\|Ga0070663_100108270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2084	Open in IMG/M
3300005455\|Ga0070663_100746043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	835	Open in IMG/M
3300005457\|Ga0070662_100358452	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300005535\|Ga0070684_100187123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1883	Open in IMG/M
3300005543\|Ga0070672_100282537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1403	Open in IMG/M
3300005546\|Ga0070696_100657913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	850	Open in IMG/M
3300005616\|Ga0068852_100188545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1944	Open in IMG/M
3300005718\|Ga0068866_10157114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1322	Open in IMG/M
3300005719\|Ga0068861_100692446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	946	Open in IMG/M
3300005764\|Ga0066903_100868614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1626	Open in IMG/M
3300005764\|Ga0066903_102850411	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300005841\|Ga0068863_100169392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2094	Open in IMG/M
3300006057\|Ga0075026_100199905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1051	Open in IMG/M
3300006575\|Ga0074053_11191769	Not Available	559	Open in IMG/M
3300006854\|Ga0075425_100341473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1724	Open in IMG/M
3300006854\|Ga0075425_102782874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300006871\|Ga0075434_100818032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	947	Open in IMG/M
3300006904\|Ga0075424_102048869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	603	Open in IMG/M
3300006904\|Ga0075424_102067591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	600	Open in IMG/M
3300006914\|Ga0075436_100515640	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300006954\|Ga0079219_11208441	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300007076\|Ga0075435_101725367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	549	Open in IMG/M
3300009011\|Ga0105251_10344440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	679	Open in IMG/M
3300009092\|Ga0105250_10094264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1219	Open in IMG/M
3300009101\|Ga0105247_11574738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	539	Open in IMG/M
3300009156\|Ga0111538_10655995	All Organisms → cellular organisms → Bacteria → Proteobacteria	1330	Open in IMG/M
3300009162\|Ga0075423_10529262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1240	Open in IMG/M
3300009174\|Ga0105241_10264065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300009177\|Ga0105248_10324858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1733	Open in IMG/M
3300010043\|Ga0126380_10360407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1063	Open in IMG/M
3300010043\|Ga0126380_10574363	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300010046\|Ga0126384_11119782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	723	Open in IMG/M
3300010358\|Ga0126370_11829827	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300010359\|Ga0126376_11758387	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300010359\|Ga0126376_12685064	Not Available	547	Open in IMG/M
3300010360\|Ga0126372_10561750	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300010371\|Ga0134125_10304320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1770	Open in IMG/M
3300010375\|Ga0105239_10591623	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300010397\|Ga0134124_13219522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300010400\|Ga0134122_10009357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7295	Open in IMG/M
3300010403\|Ga0134123_10160662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1871	Open in IMG/M
3300012474\|Ga0157356_1007847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	672	Open in IMG/M
3300012501\|Ga0157351_1011367	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300012502\|Ga0157347_1004412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1306	Open in IMG/M
3300012510\|Ga0157316_1000420	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300012515\|Ga0157338_1032873	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300012948\|Ga0126375_12046157	Not Available	507	Open in IMG/M
3300012957\|Ga0164303_10021467	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300012958\|Ga0164299_10005110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4408	Open in IMG/M
3300012986\|Ga0164304_10122122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1593	Open in IMG/M
3300012989\|Ga0164305_10006896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5230	Open in IMG/M
3300013306\|Ga0163162_13291330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	517	Open in IMG/M
3300013307\|Ga0157372_10693717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1185	Open in IMG/M
3300014325\|Ga0163163_10945752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	925	Open in IMG/M
3300014326\|Ga0157380_10246721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1614	Open in IMG/M
3300014745\|Ga0157377_10071749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2003	Open in IMG/M
3300015371\|Ga0132258_12469640	All Organisms → cellular organisms → Bacteria → Proteobacteria	1301	Open in IMG/M
3300015372\|Ga0132256_102064480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300015373\|Ga0132257_101641889	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300015373\|Ga0132257_102871717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	628	Open in IMG/M
3300017944\|Ga0187786_10058126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1188	Open in IMG/M
3300017944\|Ga0187786_10182797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	784	Open in IMG/M
3300017947\|Ga0187785_10001894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6984	Open in IMG/M
3300017947\|Ga0187785_10002355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	6233	Open in IMG/M
3300017974\|Ga0187777_10039097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3046	Open in IMG/M
3300018051\|Ga0184620_10192035	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300018060\|Ga0187765_10004982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5607	Open in IMG/M
3300018072\|Ga0184635_10020388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2425	Open in IMG/M
3300025321\|Ga0207656_10365488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	722	Open in IMG/M
3300025711\|Ga0207696_1136538	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300025735\|Ga0207713_1265982	Not Available	501	Open in IMG/M
3300025898\|Ga0207692_11166037	Not Available	511	Open in IMG/M
3300025905\|Ga0207685_10001805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4662	Open in IMG/M
3300025907\|Ga0207645_10022414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4109	Open in IMG/M
3300025911\|Ga0207654_10160513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1452	Open in IMG/M
3300025919\|Ga0207657_10371610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1127	Open in IMG/M
3300025923\|Ga0207681_11007728	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300025926\|Ga0207659_11646392	Not Available	547	Open in IMG/M
3300025928\|Ga0207700_10075151	All Organisms → cellular organisms → Bacteria → Proteobacteria	2617	Open in IMG/M
3300025933\|Ga0207706_10076391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2946	Open in IMG/M
3300025937\|Ga0207669_10034319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2874	Open in IMG/M
3300025942\|Ga0207689_10027738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4738	Open in IMG/M
3300025945\|Ga0207679_10384970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1230	Open in IMG/M
3300025961\|Ga0207712_10392188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1165	Open in IMG/M
3300025986\|Ga0207658_10100329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2266	Open in IMG/M
3300026118\|Ga0207675_100042660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	4236	Open in IMG/M
3300026142\|Ga0207698_10487173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1197	Open in IMG/M
3300028824\|Ga0307310_10103545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1269	Open in IMG/M
3300028875\|Ga0307289_10004696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5335	Open in IMG/M
3300031170\|Ga0307498_10000305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	6194	Open in IMG/M
3300031226\|Ga0307497_10054359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1417	Open in IMG/M
3300031474\|Ga0170818_103944889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3704	Open in IMG/M
3300031720\|Ga0307469_10624326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	967	Open in IMG/M
3300031740\|Ga0307468_100214900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1316	Open in IMG/M
3300031854\|Ga0310904_10001854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7001	Open in IMG/M
3300031858\|Ga0310892_10026054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2653	Open in IMG/M
3300031908\|Ga0310900_11044757	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300032000\|Ga0310903_10024746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2080	Open in IMG/M
3300032013\|Ga0310906_10035383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2323	Open in IMG/M
3300032205\|Ga0307472_102219943	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300034818\|Ga0373950_0005221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.	1932	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.54%
Host-Associated	Host-Associated	47.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Plants	Host-Associated → Plants	47.46%
Aquatic	Environmental → Aquatic	2.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.86%
Sediment	Environmental → Aquatic → Sediment	2.54%
Roots	Host-Associated → Plants → Roots	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.25%
Loam	Environmental → Terrestrial → Soil → Loam	13.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.54%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.47%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066819_10028732	3300005148	Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0066869_100011842	3300005165	Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0066809_100380732	3300005168	Soil	QEIELSALETRRDFRRSQETRAKYWHVAIVSLFFLAVVGSGLFLGAVMVIGALRSDESNELTAGSRTGRIARSLQDGKLCHYVIFDNKTAIAIEDRIGRCDEDKPKPKKERPAMFSWGK*
Ga0066810_100088891	3300005169	Soil	MATITRQEIELSALETRRDFRRSQETRAKYWHVAIVSLFFLAVVGSGLFLGAVMVIGALRSDESNELTAGSRTGRIARSLQDGKLCHYVIFDNKTAIAIEDRIGRCDEDKPKPKKER
Ga0070683_1000737442	3300005329	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0070690_1002127921	3300005330	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0066388_1005994752	3300005332	Tropical Forest Soil	MTTITRPGIEMASVETRRDFRRSQETLAKFRHVAIVSLFFVAVVGSGLFLGAVIVMSTLPGDEANEPTAGRRTARIACSLPDGKLCHYMIFDNKTATAVEDRVGRCDEDKPKRKKERPAAVSWGK*
Ga0066388_1010051122	3300005332	Tropical Forest Soil	MHFGMTTITRPGIEMTAVETRRNFHRSQETQAKFWHLAIVSLFFVAVVGSGLFLGAVMVMGTLRGTEANEPATASRTGRVARSLPDGKFCHYVVFDNKTAATVEDRIGRCDEDKPKSKKERPATFSWGR*
Ga0066388_1015465042	3300005332	Tropical Forest Soil	SQETCERFWQVVIVSAFFLIVVGTSLFLGAVMVMGTLNRDDPNPLTADGRTARIARSLNDGKLCHYIIFDNKTARAIEDRIGRCDESKPKPKKESPATFSWGK*
Ga0066388_1037346791	3300005332	Tropical Forest Soil	MATSARPGIEVTAIESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDGSNEPAAGSRTARVARALQDGKLCHYVVFDNKTATAIEDRIGRCDEDKPKPKKERPAAFSWGK*
Ga0070666_100975783	3300005335	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0070682_1000907871	3300005337	Corn Rhizosphere	YAFEMATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0070660_1000373694	3300005339	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0070689_1013180822	3300005340	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTATAIEDRIGRCDED
Ga0070687_1010208422	3300005343	Switchgrass Rhizosphere	DFRQLQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0070668_1004419912	3300005347	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0070667_1000246524	3300005367	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0070663_1001082701	3300005455	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDR
Ga0070663_1007460432	3300005455	Corn Rhizosphere	SQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0070662_1003584521	3300005457	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVMSTLRGDEANKPTAGRRTARIARSLPDGKLCHYITFDNKTATGVEDQVGRCDEDKPKPKKERPAAFSWGNSIVLPFTN*
Ga0070684_1001871231	3300005535	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDE
Ga0070672_1002825371	3300005543	Miscanthus Rhizosphere	IRYAFEMATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0070696_1006579131	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0068852_1001885453	3300005616	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0068866_101571142	3300005718	Miscanthus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDQIGRCDEDRPKPKKEKPAAFSWGK*
Ga0068861_1006924461	3300005719	Switchgrass Rhizosphere	RRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0066903_1008686143	3300005764	Tropical Forest Soil	MATITRPGIEMTAVETRRDLRRSEETRARFWHVATVSLFFVAVIGSGLFLGAVMVMGTLRGDESNEPAATSRTGRVARSLPDGKHCHYVIFDNKTANAIEDRIGRCDEDKPKPKKE
Ga0066903_1028504112	3300005764	Tropical Forest Soil	MATSARPGIEVTAIEGRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDGSNEPAAGSRTARVARALQDGKLCHYVVFDNKTATAIEDRIGRCDEDKPKPK
Ga0068863_1001693921	3300005841	Switchgrass Rhizosphere	TSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0075026_1001999052	3300006057	Watersheds	MATITRQEIELSALETRRDFRRSKETRAKYWHVAIVSLFFLAVVGSGLFLGAVIVIGALQSDESNELTAGSRTGRIARTLQDGKLCHYVIFDNKTAIAIEDRIGRCDEDKPKPKKERPAMFSWGK*
Ga0074053_111917692	3300006575	Soil	QETRAKFWHVAIVSLFFVAVVGSGLFLGAGMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0075425_1003414733	3300006854	Populus Rhizosphere	SQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVMSTPRGDEANKPTAGRRTARIARSLPDGKLCHYITFDNKTATGVEDQVGRCDEDKPKPKKERPAAFSWGNSIVLPFTN*
Ga0075425_1027828742	3300006854	Populus Rhizosphere	SIIIRYAFEMATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCNEDKPKPKKEKPATFSWGK*
Ga0075434_1008180321	3300006871	Populus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFLHVAIVSLFFVAVVGSDLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCNEDKPKPKKEKPATFSWGK*
Ga0075424_1020488692	3300006904	Populus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFLHVAIVSLFFVAVVGSDLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0075424_1020675912	3300006904	Populus Rhizosphere	MATSVRPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0075436_1005156402	3300006914	Populus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFLHVAIVSLFFVAVVGSGLFLEAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCNEDKPKPKKEKPATFSWG
Ga0079219_112084412	3300006954	Agricultural Soil	ATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0075435_1017253671	3300007076	Populus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCNEDKPKPKKEKPATFSWGK*
Ga0105251_103444402	3300009011	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKSAAFSWGK*
Ga0105250_100942642	3300009092	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQLQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0105247_115747381	3300009101	Switchgrass Rhizosphere	IIIRYAFEMATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0111538_106559951	3300009156	Populus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFLHVAIVSLFFVAVVGSDLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0075423_105292622	3300009162	Populus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVPLVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0105241_102640652	3300009174	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKSAAFSWGK*
Ga0105248_103248583	3300009177	Switchgrass Rhizosphere	VTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0126380_103604071	3300010043	Tropical Forest Soil	MATSARPGIEVTAIEGRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDGSNEPAAGSRTARVARALQDGKLCHYVVFDNKTATAIEDRIGRCDEDKPKPKKERPAAFSWGK*
Ga0126380_105743632	3300010043	Tropical Forest Soil	MHFGMTTITRPEIEMTAVETRRNFHRSQETQAKFWHLAIVSLFFVAVVGSGLFLGAVMVMGTLRGTEANEPATASRTGRVARSLPDGKFCHYVVFDNKTAATVEDRIGRCDEDKPKSKKERPATFSWGR*
Ga0126384_111197822	3300010046	Tropical Forest Soil	FRHVQIRAKKFRADQSFFIMHFGMTTITRPGIEMTAVETRRNFHRSQETQAKFWHLAIVSLFFVAVVGSGLFLGAVMVMGTLRGTEANEPATASRTGRVARSLPDGKFCHYVVFDNKTAATVEDRIGRCDEDKPKSKKERPATFSWGR*
Ga0126370_118298272	3300010358	Tropical Forest Soil	AEIGLAKPSAFLLAQIRSKKFRADQSFLAMHFAMATITRPGIEMTAVETRRDLRRSEETRARFWHVATVSLFFVAVIGSGLFLGAVMVMGTLRGDESNEPAATSRTGRVARSLPDGKHCHYVIFDNKTANAIEDRIGRCDEDKPKPKKERPAAFSWGK*
Ga0126376_117583872	3300010359	Tropical Forest Soil	SAVPCRECAEIGLAKPSAFLLAQIRAKKFRADQSFLAMHFAMATITRPGIEMTAVETRRDLRRSEETRARFWHVATVSLFFVGVIGSGLFLGAVMVMGTLRGDESNEPAATSRTGRVARSLPDGKHCHYVIFDNKTANAIEDRIGRCDEGKPKAKKERPAAFSWGK*
Ga0126376_126850641	3300010359	Tropical Forest Soil	MTTITRPGIEMASVETRRDFRRSQETLAKFRHVAIVSLFFVAVVGSGLFLGAVIVMSTLRGDEANELTAGRRTARIACSLPDGKLCHYMIFDNKTATAVEDRVGRCDEDKPKRKKERPAAVSWGK*
Ga0126372_105617502	3300010360	Tropical Forest Soil	MATSARPGIEVTAFESRRDFRQSPEPRGKFWHVAIVSLFFVAVAGSGLVMVVGTLRGDNSNESAAGSRTGRVARVLQDGQLCHYVVFDNKTATAIEDRIGRCDEDKPKSKKERPAAFSWGK*
Ga0134125_103043201	3300010371	Terrestrial Soil	MATITRQEIELSALETRRDFRRSQETRAKYWHVAIVSLFFLAVVGSGLFLGAVMVIGALRSDESNELTAGSRTGRIARSLQDGKLCHYVIFDNKTAIAIEDRIGR
Ga0105239_105916232	3300010375	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDR
Ga0134124_132195222	3300010397	Terrestrial Soil	SARPGTEVTAFESRLDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0134122_100093572	3300010400	Terrestrial Soil	MATITRQEIELSALETRRDFRRSQETRAKYWHVAIVSLFFLAVVGSGLFLGAVMVIGALRSDESNELTAGSRTGRIARSLQDGKLCHYVIFDNKTAIAIEDRIGRCDEDKPKPKKERPAMFSWGK*
Ga0134123_101606623	3300010403	Terrestrial Soil	TAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0157356_10078472	3300012474	Unplanted Soil	VTAFESRRDFRQSRETRAKFLHVAIVSLFFVAVVGSDLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0157351_10113672	3300012501	Unplanted Soil	MATSARPGTEVTAFESRRDFRQSQETRTKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0157347_10044121	3300012502	Arabidopsis Rhizosphere	RPSKALFFLLDQIRAKKFRADQSLFVIVMATSARPGTEVTAFESRRDFRQSQETRTKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0157316_10004201	3300012510	Arabidopsis Rhizosphere	AFEMATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARTLQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0157338_10328732	3300012515	Arabidopsis Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRTKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWG
Ga0126375_120461571	3300012948	Tropical Forest Soil	MAAAETRRDFRRSQETRAKFWHVAIVSLFFVAVVGSGLFLGGVAVMSTRRGDEANEPTADRRTAQIPRSPPDGNLCHDNKTATAVEDRVGRCDESAGANSIVVPFTN*
Ga0164303_100214675	3300012957	Soil	MATSARPGTEVTAFESRRDFRQLQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0164299_100051105	3300012958	Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIVRCDEDRPKPKKEKPAAFSWGK*
Ga0164304_101221223	3300012986	Soil	RPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0164305_100068966	3300012989	Soil	AFEMATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0163162_132913302	3300013306	Switchgrass Rhizosphere	EMATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0157372_106937172	3300013307	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0163163_109457521	3300014325	Switchgrass Rhizosphere	TSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK*
Ga0157380_102467212	3300014326	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHFAIVSLFFVAVIGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVTFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0157377_100717492	3300014745	Miscanthus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVSFDNKTATAIEDRIGRCDEDKPKPKKEKSAAFSWGK*
Ga0132258_124696402	3300015371	Arabidopsis Rhizosphere	MATSARPGTEVTAFESRRAFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKP
Ga0132256_1020644802	3300015372	Arabidopsis Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDQIGRCDEHKPKPKKEKPAAFSWGK*
Ga0132257_1016418892	3300015373	Arabidopsis Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFLHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCNEDKPKPKKEKPATFSWGK*
Ga0132257_1028717172	3300015373	Arabidopsis Rhizosphere	VTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK*
Ga0187786_100581262	3300017944	Tropical Peatland	MTAVETRRDLRRSEETRARFWHVAIVSLFFVAVVGSGLFLGAVMVMGTLRGDESNEAAATSRTGRVARSLPDGKHCHYIIFDNKTANAIEDRIGRCDEDKPKAKRERPAAFSWGK
Ga0187786_101827972	3300017944	Tropical Peatland	MATSARPATEVTAFESRRDFRQSQETRARFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDNSNESAASSRTGRIARVLQDGKLCHYVVFDNKTATAIEDRIGRCDEDKPKSKKERPAAFSWGK
Ga0187785_100018942	3300017947	Tropical Peatland	MVTITRPEIEMTAVETRRDLRRSEETRARFWHVAIVSLFFVAVVGSGLFLGAVMVMGTLRGDESNEAAATSRTGRVARSLPDGKHCHYVIFDNKTANAIEDRIGRCDEDKPKAKRERPAAFSWGK
Ga0187785_100023554	3300017947	Tropical Peatland	MHSEMATSARPATEVTAFESRRDFRQSQETRARFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDNSNESAAGSRTGRIARVLQDGKLCHYVVFDNKTATAIEDRIGRCDEDKPKPKKERPAAFSWGK
Ga0187777_100390973	3300017974	Tropical Peatland	MPTSARPATEVTAFESRRDLRQSQETRARFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDNSNESAAGSRTGRVARVLQDGKLCHYVVFDNKTATAIEDRIGRCDEDKPKSKKERPAAFSWGK
Ga0184620_101920352	3300018051	Groundwater Sediment	MATITRNLSTVEARRSLESRAKFWHVAIVSLFFVAVVGSGLFLGTVMVIGTFRSDGSSEMTAGSRTGRIARSMPDGKLCHYIVFDNRTATAVEDRVGRCDEDKPKPKKERPAAFSWG
Ga0187765_100049824	3300018060	Tropical Peatland	MATSARPATEVTAFESRRDFRQSQETRARFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDNSDESAAGSRTGRVARVLQDGKLCHYVVFDNKTATAIEDRIGRCDEDKPKSKKERPAAFSWGK
Ga0184635_100203882	3300018072	Groundwater Sediment	MATITRNLSTVEARRSLESRAKFWHVAIVSLFFVAVVGSGLFLGTVMVIGTFRSDGSSEMTAGSRTGRIARSMPDGKLCHYIVFDNRTATAVEDRVGRCDEDKPKPKKERPAAFSWGK
Ga0207656_103654882	3300025321	Corn Rhizosphere	TRAKFWHVAIVSLFFVAVVGSGLFLGAVLVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0207696_11365382	3300025711	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQLQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0207713_12659821	3300025735	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0207692_111660371	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFS
Ga0207685_100018051	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWG
Ga0207645_100224144	3300025907	Miscanthus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGSVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0207654_101605132	3300025911	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0207657_103716102	3300025919	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVLVVGKLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0207681_110077282	3300025923	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0207659_116463921	3300025926	Miscanthus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTASAIEDRIGRCHEDRPKPKKEKPAAFSWGQSWPWMSRPASRSSSSVAIVGLALVRRSSL
Ga0207700_100751512	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0207706_100763911	3300025933	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0207669_100343192	3300025937	Miscanthus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0207689_100277382	3300025942	Miscanthus Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0207679_103849702	3300025945	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0207712_103921882	3300025961	Switchgrass Rhizosphere	ARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWG
Ga0207658_101003294	3300025986	Switchgrass Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0207675_1000426604	3300026118	Switchgrass Rhizosphere	MATSARPGTEVTAFGSRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGRLCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0207698_104871732	3300026142	Corn Rhizosphere	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDVRLCHYVIFDNKTASAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0307310_101035451	3300028824	Soil	MATITRNLSTVEARRSLESRAKFWHVAIVSLFFVEVVGSGLFLGTVMVIGTFRSDGSSEMTAGSRTGRIARSMPDGKLCHYIVFDNRTATAVEDRVGRCDEDKPKPKKERPAAFNWGK
Ga0307289_100046965	3300028875	Soil	MATITRNLSTVEARRSLESRAKFWHVAIVSLFFVEVVGSGLFLGTVMVIGTFRSDGSSEMTAGSRTGRIARSMPDGKLCHYIVFENRTATAVEDRVGRCDEYKPKPKKERPAAFSWGK
Ga0307498_100003056	3300031170	Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLRAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDQIGRCDEHKPKPKKEKPAAFSWGK
Ga0307497_100543592	3300031226	Soil	MATITRNLSTVEARRSLESRAKFWHVAIVSLFFVAVVGSGLFLGTVMVIGTFRSDGSSEMTAGSRTGRIARSMPDGKLCHYIVFDNRTATAVEDRVGRCDEDKPKPKKERPAAFGWGK
Ga0170818_1039448891	3300031474	Forest Soil	SRAKFWHVAIVSLFFVAVVGSGLFLGTVMVIGTFRSDGSSEMTAGSRTGRIARSMPDGKLCHYIVFDNRTATAVEDRVGRCDEDKPKPKKERPAAFSWGK
Ga0307469_106243262	3300031720	Hardwood Forest Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0307468_1002149002	3300031740	Hardwood Forest Soil	MATSARPGTEVTAFESRRDFRQLQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDRPKPKKEKPAAFSWGK
Ga0310904_100018544	3300031854	Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLLLGAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0310892_100260543	3300031858	Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLRAVMVVGTLRGDDSNEPTSGSRTGRVARALQDGKFCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0310900_110447571	3300031908	Soil	RDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0310903_100247465	3300032000	Soil	ESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSSEPAAGSRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCNEDKPKPKKEKPATFSWGK
Ga0310906_100353832	3300032013	Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKFCHYVIFDNKTATAIEDQIGRCDEHKPKPKKEKPAAFSWGK
Ga0307472_1022199431	3300032205	Hardwood Forest Soil	RDFRQLQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRSDDSREPAAGSRTGRVARDIQDGKLCHYVIFDNKTATAIEDRIGRCDEDKPKPKKEKPAAFSWGK
Ga0373950_0005221_1541_1918	3300034818	Rhizosphere Soil	MATSARPGTEVTAFESRRDFRQSQETRAKFWHVAIVSLFFVAVVGSGLFLGAVMVVGTLRGDDSNEPAAGNRTGRVARALQDGKLCHYVIFDNKTATAIEDRIGRCNEDKPKPKKEKPATFSWGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076056

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences