Metagenome / Metatranscriptome Family F076043

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076043
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	56 residues
Representative Sequence	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREV
Number of Associated Samples	80
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	61.86 %
% of genes near scaffold ends (potentially truncated)	36.44 %
% of genes from short scaffolds (< 2000 bps)	73.73 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (60.169 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (41.525 % of family members)
Environment Ontology (ENVO)	Unclassified (64.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.915 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 81.13% β-sheet: 0.00% Coil/Unstructured: 18.87%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01818	Translat_reg	10.17
PF00011	HSP20	4.24
PF00383	dCMP_cyt_deam_1	4.24
PF02562	PhoH	3.39
PF10263	SprT-like	2.54
PF14090	HTH_39	1.69
PF03796	DnaB_C	1.69
PF16790	Phage_clamp_A	1.69
PF00154	RecA	1.69
PF00004	AAA	1.69
PF07883	Cupin_2	0.85
PF03332	PMM	0.85
PF16473	Rv2179c-like	0.85
PF07087	DUF1353	0.85
PF04519	Bactofilin	0.85
PF13476	AAA_23	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	4.24
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	3.39
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	3.39
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.69
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	1.69
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	1.69
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.85
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
All Organisms	root	All Organisms	39.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
cellular organisms	root	All Organisms → cellular organisms	22.88 %
Viruses	superkingdom	All Organisms → Viruses	16.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.49 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	9.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	9.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.08 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.08 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	2.54 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	9.32 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	5.08 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.39 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.69 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.85 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9.32 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	6.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5.08 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	3.39 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.69 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.69 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.85 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.78 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	5.93 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	5.08 %
unclassified Legionellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales	3.39 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.54 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.69 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.69 %
Polybotosvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Polybotosvirus	0.85 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.85 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.78 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	5.08 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5.08 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	3.39 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.54 %
Komagataeibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter	1.69 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.69 %
Polybotosvirus Atuph07	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Polybotosvirus → Polybotosvirus Atuph07	0.85 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.85 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.78 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	5.08 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5.08 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	3.39 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.54 %
Komagataeibacter diospyri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter diospyri	1.69 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.69 %
Polybotosvirus Atuph07	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Polybotosvirus → Polybotosvirus Atuph07	0.85 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.85 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.17 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.78 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	5.08 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5.08 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	3.39 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.54 %
Komagataeibacter diospyri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter diospyri	1.69 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1.69 %
Polybotosvirus Atuph07	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Polybotosvirus → Polybotosvirus Atuph07	0.85 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.85 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001352\|JGI20157J14317_10079106	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1293	Open in IMG/M
3300004457\|Ga0066224_1223310	Not Available	531	Open in IMG/M
3300005747\|Ga0076924_1035471	Not Available	17164	Open in IMG/M
3300006025\|Ga0075474_10045504	All Organisms → Viruses → Predicted Viral	1496	Open in IMG/M
3300006027\|Ga0075462_10060927	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1192	Open in IMG/M
3300006027\|Ga0075462_10159784	Not Available	686	Open in IMG/M
3300006637\|Ga0075461_10035656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1632	Open in IMG/M
3300006637\|Ga0075461_10111921	Not Available	853	Open in IMG/M
3300006802\|Ga0070749_10016469	Not Available	4711	Open in IMG/M
3300006802\|Ga0070749_10045798	Not Available	2678	Open in IMG/M
3300006802\|Ga0070749_10178559	Not Available	1224	Open in IMG/M
3300006810\|Ga0070754_10377065	Not Available	624	Open in IMG/M
3300006916\|Ga0070750_10155506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1032	Open in IMG/M
3300006916\|Ga0070750_10193604	Not Available	903	Open in IMG/M
3300006916\|Ga0070750_10252910	Not Available	764	Open in IMG/M
3300006919\|Ga0070746_10053031	Not Available	2111	Open in IMG/M
3300006919\|Ga0070746_10069676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1796	Open in IMG/M
3300006919\|Ga0070746_10440215	Not Available	580	Open in IMG/M
3300007234\|Ga0075460_10009038	Not Available	3987	Open in IMG/M
3300007234\|Ga0075460_10052625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1525	Open in IMG/M
3300007234\|Ga0075460_10117780	Not Available	944	Open in IMG/M
3300007236\|Ga0075463_10049264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1365	Open in IMG/M
3300007236\|Ga0075463_10206383	Not Available	633	Open in IMG/M
3300007538\|Ga0099851_1004346	All Organisms → cellular organisms → Bacteria	5943	Open in IMG/M
3300007538\|Ga0099851_1009726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	3955	Open in IMG/M
3300007538\|Ga0099851_1220443	Not Available	685	Open in IMG/M
3300007540\|Ga0099847_1036418	All Organisms → Viruses → Predicted Viral	1571	Open in IMG/M
3300007542\|Ga0099846_1005021	Not Available	5345	Open in IMG/M
3300007542\|Ga0099846_1011195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	3544	Open in IMG/M
3300007542\|Ga0099846_1021968	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2477	Open in IMG/M
3300007960\|Ga0099850_1005256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	6028	Open in IMG/M
3300007960\|Ga0099850_1024477	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2663	Open in IMG/M
3300007960\|Ga0099850_1043771	Not Available	1925	Open in IMG/M
3300007960\|Ga0099850_1182175	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300009001\|Ga0102963_1381386	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	553	Open in IMG/M
3300009071\|Ga0115566_10770316	Not Available	530	Open in IMG/M
3300009124\|Ga0118687_10350318	Not Available	564	Open in IMG/M
3300009428\|Ga0114915_1031933	Not Available	1795	Open in IMG/M
3300009449\|Ga0115558_1213944	Not Available	790	Open in IMG/M
3300009512\|Ga0115003_10108502	Not Available	1704	Open in IMG/M
3300009526\|Ga0115004_10031302	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	3552	Open in IMG/M
3300009785\|Ga0115001_10212717	Not Available	1247	Open in IMG/M
3300010299\|Ga0129342_1017382	All Organisms → Viruses → Predicted Viral	2966	Open in IMG/M
3300010299\|Ga0129342_1146838	Not Available	862	Open in IMG/M
3300010299\|Ga0129342_1295134	Not Available	558	Open in IMG/M
3300010318\|Ga0136656_1013159	Not Available	3007	Open in IMG/M
3300010318\|Ga0136656_1145735	Not Available	812	Open in IMG/M
3300010354\|Ga0129333_10646526	Not Available	914	Open in IMG/M
3300012516\|Ga0129325_1258986	Not Available	502	Open in IMG/M
3300016724\|Ga0182048_1053282	Not Available	516	Open in IMG/M
3300016743\|Ga0182083_1331814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter diospyri	513	Open in IMG/M
3300017824\|Ga0181552_10100774	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1601	Open in IMG/M
3300017949\|Ga0181584_10505243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter diospyri	743	Open in IMG/M
3300017951\|Ga0181577_10046260	All Organisms → cellular organisms → Bacteria	3109	Open in IMG/M
3300017952\|Ga0181583_10829130	Not Available	542	Open in IMG/M
3300017964\|Ga0181589_10080355	Not Available	2387	Open in IMG/M
3300017964\|Ga0181589_10242758	Not Available	1236	Open in IMG/M
3300017967\|Ga0181590_10036155	Not Available	3973	Open in IMG/M
3300017967\|Ga0181590_10229360	Not Available	1381	Open in IMG/M
3300017967\|Ga0181590_10409298	Not Available	962	Open in IMG/M
3300017969\|Ga0181585_10373974	Not Available	977	Open in IMG/M
3300018413\|Ga0181560_10465913	Not Available	576	Open in IMG/M
3300018415\|Ga0181559_10783830	Not Available	507	Open in IMG/M
3300018417\|Ga0181558_10178916	Not Available	1233	Open in IMG/M
3300018421\|Ga0181592_10356105	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1045	Open in IMG/M
3300018421\|Ga0181592_10499753	Not Available	841	Open in IMG/M
3300018424\|Ga0181591_10539949	Not Available	844	Open in IMG/M
3300018424\|Ga0181591_10610751	Not Available	779	Open in IMG/M
3300018424\|Ga0181591_10960905	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Polybotosvirus → Polybotosvirus Atuph07	582	Open in IMG/M
3300018424\|Ga0181591_10968328	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	580	Open in IMG/M
3300018876\|Ga0181564_10180797	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	1238	Open in IMG/M
3300020176\|Ga0181556_1230990	Not Available	680	Open in IMG/M
3300020403\|Ga0211532_10309908	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	606	Open in IMG/M
3300020409\|Ga0211472_10315990	Not Available	630	Open in IMG/M
3300020410\|Ga0211699_10023930	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	2353	Open in IMG/M
3300020410\|Ga0211699_10176163	Not Available	812	Open in IMG/M
3300020411\|Ga0211587_10392585	Not Available	563	Open in IMG/M
3300020417\|Ga0211528_10176574	Not Available	829	Open in IMG/M
3300020437\|Ga0211539_10077126	Not Available	1324	Open in IMG/M
3300020470\|Ga0211543_10217127	Not Available	943	Open in IMG/M
3300020471\|Ga0211614_10232903	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	801	Open in IMG/M
3300021347\|Ga0213862_10087298	Not Available	1100	Open in IMG/M
3300021958\|Ga0222718_10317593	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	803	Open in IMG/M
3300021962\|Ga0222713_10001311	Not Available	28007	Open in IMG/M
3300021964\|Ga0222719_10028042	All Organisms → Viruses → Predicted Viral	4440	Open in IMG/M
3300022063\|Ga0212029_1004814	Not Available	1469	Open in IMG/M
3300022063\|Ga0212029_1028079	Not Available	781	Open in IMG/M
3300022169\|Ga0196903_1002985	Not Available	2292	Open in IMG/M
3300022169\|Ga0196903_1046612	Not Available	502	Open in IMG/M
3300022200\|Ga0196901_1005170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	5854	Open in IMG/M
3300022200\|Ga0196901_1285740	Not Available	501	Open in IMG/M
3300022925\|Ga0255773_10015527	Not Available	5387	Open in IMG/M
3300022927\|Ga0255769_10171969	Not Available	989	Open in IMG/M
3300023087\|Ga0255774_10404088	Not Available	614	Open in IMG/M
3300023117\|Ga0255757_10450587	Not Available	576	Open in IMG/M
3300023176\|Ga0255772_10016595	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6004	Open in IMG/M
3300023176\|Ga0255772_10111495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1701	Open in IMG/M
3300023709\|Ga0232122_1079497	Not Available	780	Open in IMG/M
3300025276\|Ga0208814_1104563	Not Available	705	Open in IMG/M
3300025630\|Ga0208004_1040319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1309	Open in IMG/M
3300025630\|Ga0208004_1082432	Not Available	793	Open in IMG/M
3300025646\|Ga0208161_1021426	All Organisms → Viruses → Predicted Viral	2425	Open in IMG/M
3300025652\|Ga0208134_1013427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	3283	Open in IMG/M
3300025655\|Ga0208795_1022236	All Organisms → Viruses → Predicted Viral	2077	Open in IMG/M
3300025759\|Ga0208899_1109584	Not Available	1013	Open in IMG/M
3300025759\|Ga0208899_1210508	Not Available	610	Open in IMG/M
3300025818\|Ga0208542_1068661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1067	Open in IMG/M
3300025818\|Ga0208542_1074501	All Organisms → Viruses → Predicted Viral	1014	Open in IMG/M
3300025818\|Ga0208542_1145141	Not Available	649	Open in IMG/M
3300025880\|Ga0209534_10033143	All Organisms → Viruses → Predicted Viral	3527	Open in IMG/M
3300025889\|Ga0208644_1308768	Not Available	624	Open in IMG/M
3300026183\|Ga0209932_1101858	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	633	Open in IMG/M
3300027780\|Ga0209502_10021297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	3924	Open in IMG/M
3300027791\|Ga0209830_10175101	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1014	Open in IMG/M
3300027917\|Ga0209536_100867157	Not Available	1116	Open in IMG/M
3300029792\|Ga0183826_1036620	Not Available	768	Open in IMG/M
3300031519\|Ga0307488_10000029	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	110887	Open in IMG/M
3300031519\|Ga0307488_10156870	All Organisms → Viruses	1587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.46%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.69%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	50.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	25.42%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.86%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.78%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.69%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.69%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	50.00%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	25.42%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.86%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	5.93%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.69%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	41.53%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	25.42%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.47%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.08%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.24%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.54%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.69%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.69%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.69%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.69%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.69%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.85%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.85%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.85%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.85%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300012516	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016724	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016743	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022169	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023709	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20157J14317_100791063	3300001352	Pelagic Marine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVQDLMSYIELELREV*
Ga0066224_12233102	3300004457	Marine	MGYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVQDLMDYIELELREV*
Ga0076924_103547110	3300005747	Marine	MDYHYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDERRKVRDLMDYVEFELQDLETV*
Ga0075474_100455044	3300006025	Aqueous	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREV*
Ga0075462_100609272	3300006027	Aqueous	MEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIIDAQ*
Ga0075462_101597841	3300006027	Aqueous	MIDKEISMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIADAQ*
Ga0075461_100356561	3300006637	Aqueous	YTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA*
Ga0075461_101119213	3300006637	Aqueous	SMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIVDAQ*
Ga0070749_100164694	3300006802	Aqueous	MEYTYTTMIHVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIIDAQ*
Ga0070749_100457983	3300006802	Aqueous	MEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDERRKVRDLMDYVGYKLDDIEAA*
Ga0070749_101785594	3300006802	Aqueous	MDYTYTTMIDVIKRIAEDGSPRHIRRQLKRLTSDEKRKIRDLMDYVEMEITDIEYDELFKETA*
Ga0070754_103770651	3300006810	Aqueous	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELEFGF*
Ga0070750_101555061	3300006916	Aqueous	MIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA*
Ga0070750_101936043	3300006916	Aqueous	MIDKEISMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIVDAQ*
Ga0070750_102529104	3300006916	Aqueous	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEM
Ga0070746_100530313	3300006919	Aqueous	MEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIVDAQ*
Ga0070746_100696765	3300006919	Aqueous	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA*
Ga0070746_104402152	3300006919	Aqueous	MEYSYTTLIDVIKRIAEDDSPRHIDRQLARLTSDEKRRVRKMMHFVELALDDI*
Ga0075460_100090384	3300007234	Aqueous	MIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIIDAQ*
Ga0075460_100526253	3300007234	Aqueous	MMIDKETSMDYTYTTMIDVIKRIAENSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA*
Ga0075460_101177802	3300007234	Aqueous	MMIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIVDAQ*
Ga0075463_100492644	3300007236	Aqueous	MMIDKETSMDYTYTTMIDVLKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA*
Ga0075463_102063832	3300007236	Aqueous	MIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIADAQ*
Ga0099851_100434614	3300007538	Aqueous	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKIRDLMD
Ga0099851_10097261	3300007538	Aqueous	VFVMDYNYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELKFGF*
Ga0099851_12204435	3300007538	Aqueous	YTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKIRDLMDYVELELREV*
Ga0099847_10364184	3300007540	Aqueous	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELEIRKV*
Ga0099846_10050217	3300007542	Aqueous	MMIDKETSMDYTYTTMIDDLKRIAEDSSPLHIHRQRKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA*
Ga0099846_10111951	3300007542	Aqueous	MDYNYTTMIDVLKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELKFGF*
Ga0099846_10219687	3300007542	Aqueous	MDYNYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKIRDLMDYVELELREV*
Ga0099850_10052561	3300007960	Aqueous	MDYNYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELKFGF*
Ga0099850_10244776	3300007960	Aqueous	MMIDKETSMDYTYTTMIDVIKRIAEDGSPRHIRRQLKRLTSDEKRKIRDLMDYVEMEITDIEYDELFKETA*
Ga0099850_10437711	3300007960	Aqueous	TTMIDVLKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA*
Ga0099850_11821753	3300007960	Aqueous	MMIDKETSMDYTYTTMIDVIKRIAEDDSPLHIHRQLKRLTSAERRKVRDLMKYVEMEITDIEYDELFKETA*
Ga0102963_13813862	3300009001	Pond Water	MMIDKELDMEYSYTTMIDVIKRIAEDDTPRHIRRQLKRLTSDEKRKIRELMDYVGFELDQQRGM*
Ga0115566_107703162	3300009071	Pelagic Marine	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELKEV*
Ga0118687_103503181	3300009124	Sediment	MDYTYITMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELKEV*
Ga0114915_10319334	3300009428	Deep Ocean	VMGYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVQDLMDYIELELREV*
Ga0115558_12139443	3300009449	Pelagic Marine	MDYTYTTMIDVIKRIAEDDSPRHIPRQLARLTSDEKRKVRDLMDYVELELREV*
Ga0115003_101085024	3300009512	Marine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVRDLMDYIEIELGDA*
Ga0115004_100313027	3300009526	Marine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVRDLMDYIEIELKDA*
Ga0115001_102127173	3300009785	Marine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVRDLMDYIEIELKDV*
Ga0129342_10173828	3300010299	Freshwater To Marine Saline Gradient	MIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREV*
Ga0129342_11468381	3300010299	Freshwater To Marine Saline Gradient	MIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELKFGF*
Ga0129342_12951341	3300010299	Freshwater To Marine Saline Gradient	MDYNYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVEL
Ga0136656_10131596	3300010318	Freshwater To Marine Saline Gradient	MMIDKETSMDYTYTTMIDVIKRIAEDGSPRHIRRQLKRLTSDEKRKIRDLMD
Ga0136656_11457351	3300010318	Freshwater To Marine Saline Gradient	MDYNYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDY
Ga0129333_106465261	3300010354	Freshwater To Marine Saline Gradient	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKIRDLMDYVELELREV*
Ga0129325_12589863	3300012516	Aqueous	FVMDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELEIRKV*
Ga0182048_10532823	3300016724	Salt Marsh	MDYNYTTKIDVIKRIAEDDSPRHIRRQLARLTSDEKRKIRDLMDYVELELREV
Ga0182083_13318143	3300016743	Salt Marsh	MIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIADA
Ga0181552_101007744	3300017824	Salt Marsh	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREV
Ga0181584_105052432	3300017949	Salt Marsh	MEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIADAQ
Ga0181577_100462604	3300017951	Salt Marsh	MEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIIDAQ
Ga0181583_108291301	3300017952	Salt Marsh	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA
Ga0181589_100803556	3300017964	Salt Marsh	MEYTYTTMIDVIKRISEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIADAQ
Ga0181589_102427581	3300017964	Salt Marsh	HMMIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIADAQ
Ga0181590_100361557	3300017967	Salt Marsh	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEI
Ga0181590_102293604	3300017967	Salt Marsh	MEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIADAQ
Ga0181590_104092982	3300017967	Salt Marsh	MIDKETSMEYTYTTMIDVIKRISEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIADA
Ga0181585_103739743	3300017969	Salt Marsh	MMIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIADAQ
Ga0181560_104659132	3300018413	Salt Marsh	MMIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIIDAQ
Ga0181559_107838301	3300018415	Salt Marsh	MDYTYTTMIDVIKRIAEDDSPRHIRRQLKRLTSDEKRKVRDLMKYVEMEITDIEYDELFKETA
Ga0181558_101789163	3300018417	Salt Marsh	MDYNYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREV
Ga0181592_103561053	3300018421	Salt Marsh	MDYSYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDERRKVRDLMDYVEFELQDLETV
Ga0181592_104997531	3300018421	Salt Marsh	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEY
Ga0181591_105399491	3300018424	Salt Marsh	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYD
Ga0181591_106107511	3300018424	Salt Marsh	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIE
Ga0181591_109609054	3300018424	Salt Marsh	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELKEV
Ga0181591_109683281	3300018424	Salt Marsh	MDYAYTTMIDVIKRIAEDDTPRHIHRQLKRLTSDEKRKIRELMDYVGFE
Ga0181564_101807972	3300018876	Salt Marsh	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREF
Ga0181556_12309903	3300020176	Salt Marsh	MDYTYTTMIDVIKRIAEDDDPRHLRRQLKRLTSDEIRKVRQLMDYVEMEITDIEYDELFGETA
Ga0211532_103099082	3300020403	Marine	MDYTYTTMIDVIKRIAEDDDPRHIRRQLKRLTSDEIRKVRQLMDYVEMEITDIEY
Ga0211472_103159902	3300020409	Marine	MMINKETPLEYTYTTMIDVIKRIAEDDSPRHIRRQLKRLTSDEKRKVRDLMKYVEMEITDIEYDELFKETV
Ga0211699_100239303	3300020410	Marine	MDYTYTTMIDVIKRIAEDDSPRHIRRQLERLTSDEIRKVRLVMSLIEHELTDIEYDEIFKEAS
Ga0211699_101761632	3300020410	Marine	MDYTYTTMIDVIKRIAEDDSARHIRRQLKRLTSDELRKVRLIMRCIENEIYDMEKS
Ga0211587_103925851	3300020411	Marine	MDYTYTTMIDVIKRIAEDDSPRHIRRQLKRLTSDEIRKVRQLMDYVEMEITDIEYDELFKETA
Ga0211528_101765742	3300020417	Marine	MDYTYTTMIDVIKRIAEDDSPRHIRRQLKRLTSDEIRKVRLVMSLIEHELTDIEYDELFKETA
Ga0211539_100771264	3300020437	Marine	ETPLDYTYTTMIDVIKRIAEDDSPRHIRRQLKRLTSDEKRKVRDLMKYVEMEITDIEYDELFKETV
Ga0211543_102171271	3300020470	Marine	MDYTYTTMIDVIKRIAEDDSPRHIRRQLERLTSDEKRKVRDLMKYVEMEITDIEYDELFKETV
Ga0211614_102329031	3300020471	Marine	MEYTYTTMIDVIKRIAEDDSPRHIRRQLDRLTTDERRKFRQLMDYVEMEITDIEYTEL
Ga0213862_100872983	3300021347	Seawater	MYILIDEKEKSMDYTYTTMIDVIKRIAEDDSPRHIRRQLKRLTSDEKRKVRDLMKYVEMEITDIEYDELFKETA
Ga0222718_103175933	3300021958	Estuarine Water	MEYSYTTMIDVIKRIAEDDTPRHIRRQLKRLTSDEKRKIRELMDYVGFELDQQRGM
Ga0222713_1000131132	3300021962	Estuarine Water	MIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIIDA
Ga0222719_100280429	3300021964	Estuarine Water	MDYTYTTMIDVIKRIAEDDSPRHIRRQLTRLTSDEKRKVRDLMDYVE
Ga0212029_10048145	3300022063	Aqueous	MDYNYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKIRDLMDYVELELREV
Ga0212029_10280791	3300022063	Aqueous	MDYTYTTMIDVLKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA
Ga0196903_10029851	3300022169	Aqueous	VMDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREV
Ga0196903_10466122	3300022169	Aqueous	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELEIRK
Ga0196901_10051701	3300022200	Aqueous	MIDVLKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELKFGF
Ga0196901_12857403	3300022200	Aqueous	YTTMIDVIKRIAEDGSPRHIRRQLKRLTSDEKRKIRDLMDYVEMEITDIEYDELFKETA
Ga0255773_1001552710	3300022925	Salt Marsh	MIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREV
Ga0255769_101719693	3300022927	Salt Marsh	MDYTYTTMIDVIKRIAEDDSPRHVRRQLARLTSDEKRKVRDLMDYVELELREV
Ga0255774_104040882	3300023087	Salt Marsh	IDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIIDAQ
Ga0255757_104505872	3300023117	Salt Marsh	MMIDKETSMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIADAQ
Ga0255772_100165959	3300023176	Salt Marsh	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDI
Ga0255772_101114951	3300023176	Salt Marsh	DYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA
Ga0232122_10794972	3300023709	Salt Marsh	MDYTYTTIIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELELREV
Ga0208814_11045631	3300025276	Deep Ocean	VMGYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVQDLMDYIELELREV
Ga0208004_10403194	3300025630	Aqueous	TYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA
Ga0208004_10824322	3300025630	Aqueous	YVHMMIDKEISMEYTYTTMIDVIKRIAEDDSPRHIRRQLNRLTSDEKRKVLNLMKYVEMEIVDAQ
Ga0208161_10214266	3300025646	Aqueous	MDYNYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVELKFGF
Ga0208134_10134274	3300025652	Aqueous	MNYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVQDLMDYIELELREV
Ga0208795_10222366	3300025655	Aqueous	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKIRDLMDYVELELREV
Ga0208899_11095841	3300025759	Aqueous	MDYTYTTMIDVIKRIAEDGSPRHIRRQLKRLTSDEKRKIRDLMDYVEMEITDIEYDELFKETA
Ga0208899_12105081	3300025759	Aqueous	MDYTYTTMIDVIKRIAENSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEY
Ga0208542_10686614	3300025818	Aqueous	VIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFKETA
Ga0208542_10745013	3300025818	Aqueous	TTMIDVIKRIAEDDSPRHIRRQLNRLTSDERRKVRDLMDYVGYKLDDIEAA
Ga0208542_11451413	3300025818	Aqueous	MDYTYTTMIDVIKRIAENSSPLHIHRQLKRLTSDERRKVRDLMKYVEMEITDIEYDELFK
Ga0209534_100331438	3300025880	Pelagic Marine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVQDLMSYIELELREV
Ga0208644_13087683	3300025889	Aqueous	MDYTYTTMIDVIKRIAEDSSPLHIHRQLKRLTSDERRKVRDLMKY
Ga0209932_11018581	3300026183	Pond Water	MDYTYTTMIDVIKRIAEDDSPRHIRRQLARLTSDEKRKVRDLMDYVEL
Ga0209502_100212975	3300027780	Marine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVRDLMDYIEIELKDA
Ga0209830_101751013	3300027791	Marine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVRNLMDYIELELGDA
Ga0209536_1008671572	3300027917	Marine Sediment	MEYTYTTMIDVIRRIAEDDSPRHIRRQLNRLTSDEKRKVLDLMKYVEMEIIDAQ
Ga0183826_10366201	3300029792	Marine	MMINKETPLDYTYTTMIDVIKRIAEDDSPRHIRRQLERLTSDEIRKVRDLMKYVEMEITDIEYDELFKETV
Ga0307488_1000002962	3300031519	Sackhole Brine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVRDLMDYIEIELGDA
Ga0307488_101568704	3300031519	Sackhole Brine	MDYTYTTMIDVIKRIAEDDTPRHIRRQLARLTSDEKRKVQNLMDYIELELREV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076043

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences