Metagenome / Metatranscriptome Family F076023

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076023
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	71 residues
Representative Sequence	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK
Number of Associated Samples	95
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.71 %
% of genes near scaffold ends (potentially truncated)	40.68 %
% of genes from short scaffolds (< 2000 bps)	87.29 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.102 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.051 % of family members)
Environment Ontology (ENVO)	Unclassified (36.441 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.102 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.42% β-sheet: 0.00% Coil/Unstructured: 39.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01632	Ribosomal_L35p	31.36
PF00453	Ribosomal_L20	14.41
PF07883	Cupin_2	5.93
PF02912	Phe_tRNA-synt_N	4.24
PF00106	adh_short	2.54
PF00440	TetR_N	1.69
PF00839	Cys_rich_FGFR	0.85
PF01381	HTH_3	0.85
PF00872	Transposase_mut	0.85
PF13649	Methyltransf_25	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0291	Ribosomal protein L35	Translation, ribosomal structure and biogenesis [J]	31.36
COG0292	Ribosomal protein L20	Translation, ribosomal structure and biogenesis [J]	14.41
COG0016	Phenylalanyl-tRNA synthetase alpha subunit	Translation, ribosomal structure and biogenesis [J]	4.24
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.10 %
Unclassified	root	N/A	33.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.10 %
Unclassified	root	N/A	33.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.10 %
Unclassified	root	N/A	33.90 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.47 %
Unclassified	root	N/A	33.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.14 %
Unclassified	root	N/A	33.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	7.63 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.85 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	33.90 %
Unclassified	root	N/A	33.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.63 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.85 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.90 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.93 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.85 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.85 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.90 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	7.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.93 %
Maritimibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter	0.85 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.85 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.90 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	7.63 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	5.93 %
Maritimibacter alkaliphilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus	0.85 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.85 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.90 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	7.63 %
Bradyrhizobium japonicum SEMIA 5079	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	5.93 %
Deinococcus roseus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus roseus	0.85 %
Maritimibacter alkaliphilus HTCC2654	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus → Maritimibacter alkaliphilus HTCC2654	0.85 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.90 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	7.63 %
Bradyrhizobium japonicum SEMIA 5079	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	5.93 %
Deinococcus roseus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus roseus	0.85 %
Maritimibacter alkaliphilus HTCC2654	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus → Maritimibacter alkaliphilus HTCC2654	0.85 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10017912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1874	Open in IMG/M
3300001471\|JGI12712J15308_10109738	Not Available	702	Open in IMG/M
3300001546\|JGI12659J15293_10000887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9599	Open in IMG/M
3300001593\|JGI12635J15846_10596630	Not Available	643	Open in IMG/M
3300002245\|JGIcombinedJ26739_100027857	All Organisms → cellular organisms → Bacteria	4961	Open in IMG/M
3300003505\|JGIcombinedJ51221_10020400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2316	Open in IMG/M
3300004080\|Ga0062385_10458196	Not Available	777	Open in IMG/M
3300004121\|Ga0058882_1810514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	809	Open in IMG/M
3300004152\|Ga0062386_101835817	Not Available	506	Open in IMG/M
3300004635\|Ga0062388_102372832	Not Available	555	Open in IMG/M
3300005332\|Ga0066388_104742958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	692	Open in IMG/M
3300005339\|Ga0070660_100314425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1285	Open in IMG/M
3300005434\|Ga0070709_11375282	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005435\|Ga0070714_101446480	Not Available	671	Open in IMG/M
3300005602\|Ga0070762_10151347	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300005602\|Ga0070762_10237061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1130	Open in IMG/M
3300005610\|Ga0070763_10116920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1361	Open in IMG/M
3300005610\|Ga0070763_10377157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	793	Open in IMG/M
3300005610\|Ga0070763_10971904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	507	Open in IMG/M
3300005614\|Ga0068856_100147182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2363	Open in IMG/M
3300005921\|Ga0070766_10161680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1378	Open in IMG/M
3300006028\|Ga0070717_11152702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300006086\|Ga0075019_10824604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	592	Open in IMG/M
3300006638\|Ga0075522_10414159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300009093\|Ga0105240_10195285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2377	Open in IMG/M
3300009633\|Ga0116129_1041073	All Organisms → cellular organisms → Bacteria → Proteobacteria	1474	Open in IMG/M
3300009826\|Ga0123355_10929419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	938	Open in IMG/M
3300010049\|Ga0123356_10352833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1595	Open in IMG/M
3300010379\|Ga0136449_103375091	Not Available	612	Open in IMG/M
3300010864\|Ga0126357_1302748	All Organisms → cellular organisms → Bacteria → Proteobacteria	1422	Open in IMG/M
3300011120\|Ga0150983_12822995	Not Available	765	Open in IMG/M
3300012077\|Ga0153929_1105110	Not Available	518	Open in IMG/M
3300012212\|Ga0150985_108134997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	953	Open in IMG/M
3300012469\|Ga0150984_110987586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	523	Open in IMG/M
3300015206\|Ga0167644_1025138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2514	Open in IMG/M
3300015206\|Ga0167644_1053983	Not Available	1416	Open in IMG/M
3300015242\|Ga0137412_10849176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300019179\|Ga0184593_108859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	715	Open in IMG/M
3300020579\|Ga0210407_10016645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5452	Open in IMG/M
3300020579\|Ga0210407_10912484	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	673	Open in IMG/M
3300020581\|Ga0210399_11493949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	524	Open in IMG/M
3300021171\|Ga0210405_10604934	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300021180\|Ga0210396_11360437	Not Available	589	Open in IMG/M
3300021384\|Ga0213876_10021404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3419	Open in IMG/M
3300021401\|Ga0210393_10968654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	689	Open in IMG/M
3300021401\|Ga0210393_11025228	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300021405\|Ga0210387_11080493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	700	Open in IMG/M
3300021405\|Ga0210387_11560115	Not Available	563	Open in IMG/M
3300021406\|Ga0210386_10509543	Not Available	1040	Open in IMG/M
3300021406\|Ga0210386_11003585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	712	Open in IMG/M
3300021406\|Ga0210386_11205197	Not Available	640	Open in IMG/M
3300021420\|Ga0210394_11546967	Not Available	560	Open in IMG/M
3300021475\|Ga0210392_10699878	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	754	Open in IMG/M
3300021477\|Ga0210398_11401869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300021479\|Ga0210410_11049482	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300021855\|Ga0213854_1007910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	643	Open in IMG/M
3300022498\|Ga0242644_1028962	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300022504\|Ga0242642_1016993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	956	Open in IMG/M
3300022506\|Ga0242648_1013226	Not Available	967	Open in IMG/M
3300022507\|Ga0222729_1015463	Not Available	853	Open in IMG/M
3300022523\|Ga0242663_1086512	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300022527\|Ga0242664_1045995	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300022527\|Ga0242664_1081560	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300022528\|Ga0242669_1098227	Not Available	564	Open in IMG/M
3300022528\|Ga0242669_1130497	Not Available	512	Open in IMG/M
3300022528\|Ga0242669_1133925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300022533\|Ga0242662_10078433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	907	Open in IMG/M
3300022712\|Ga0242653_1020038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	926	Open in IMG/M
3300022717\|Ga0242661_1136861	Not Available	540	Open in IMG/M
3300022718\|Ga0242675_1069227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	628	Open in IMG/M
3300022721\|Ga0242666_1194400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	516	Open in IMG/M
3300022722\|Ga0242657_1080197	Not Available	774	Open in IMG/M
3300022726\|Ga0242654_10038056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1299	Open in IMG/M
3300025633\|Ga0208480_1011181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2869	Open in IMG/M
3300025909\|Ga0207705_10372330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1103	Open in IMG/M
3300025913\|Ga0207695_10520586	Not Available	1071	Open in IMG/M
3300025919\|Ga0207657_10347688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
3300026555\|Ga0179593_1009793	All Organisms → cellular organisms → Bacteria → Proteobacteria	2518	Open in IMG/M
3300027117\|Ga0209732_1018564	Not Available	1176	Open in IMG/M
3300027575\|Ga0209525_1067212	Not Available	864	Open in IMG/M
3300027590\|Ga0209116_1069300	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300027609\|Ga0209221_1059902	Not Available	1003	Open in IMG/M
3300027609\|Ga0209221_1154800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	568	Open in IMG/M
3300027619\|Ga0209330_1024823	Not Available	1354	Open in IMG/M
3300027692\|Ga0209530_1019561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2049	Open in IMG/M
3300027895\|Ga0209624_10004155	All Organisms → cellular organisms → Bacteria	10019	Open in IMG/M
3300027895\|Ga0209624_10312451	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300027895\|Ga0209624_10428167	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300027908\|Ga0209006_10068576	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300027908\|Ga0209006_10364337	Not Available	1223	Open in IMG/M
3300027908\|Ga0209006_10719406	Not Available	816	Open in IMG/M
3300027908\|Ga0209006_10765140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus roseus	785	Open in IMG/M
3300028773\|Ga0302234_10380912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	604	Open in IMG/M
3300028906\|Ga0308309_10835926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	800	Open in IMG/M
3300029636\|Ga0222749_10627717	Not Available	588	Open in IMG/M
3300029999\|Ga0311339_10812673	Not Available	899	Open in IMG/M
3300030535\|Ga0210285_1490774	Not Available	554	Open in IMG/M
3300030580\|Ga0311355_11443188	Not Available	597	Open in IMG/M
3300030624\|Ga0210251_10947317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum → Bradyrhizobium japonicum SEMIA 5079	663	Open in IMG/M
3300030740\|Ga0265460_11484612	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300030743\|Ga0265461_12275059	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300030761\|Ga0265722_101056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	903	Open in IMG/M
3300030863\|Ga0265766_1007679	Not Available	729	Open in IMG/M
3300030916\|Ga0075386_10512700	Not Available	545	Open in IMG/M
3300031057\|Ga0170834_104007750	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300031231\|Ga0170824_104629458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	924	Open in IMG/M
3300031231\|Ga0170824_104886042	Not Available	523	Open in IMG/M
3300031236\|Ga0302324_100258726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2708	Open in IMG/M
3300031446\|Ga0170820_15790461	Not Available	614	Open in IMG/M
3300031446\|Ga0170820_16469901	Not Available	544	Open in IMG/M
3300031708\|Ga0310686_112222039	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031708\|Ga0310686_117968138	Not Available	794	Open in IMG/M
3300031715\|Ga0307476_11271441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300031938\|Ga0308175_101040735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Maritimibacter → Maritimibacter alkaliphilus → Maritimibacter alkaliphilus HTCC2654	906	Open in IMG/M
3300031996\|Ga0308176_10063169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3098	Open in IMG/M
3300032074\|Ga0308173_12096696	Not Available	533	Open in IMG/M
3300032515\|Ga0348332_12510570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	678	Open in IMG/M
3300032515\|Ga0348332_13689642	Not Available	760	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.83%
Host-Associated	Host-Associated	10.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.75%
Plants	Host-Associated → Plants	7.63%
Aquatic	Environmental → Aquatic	5.08%
Arthropoda	Host-Associated → Arthropoda	1.69%
Fungi	Host-Associated → Fungi	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.08%
Freshwater	Environmental → Aquatic → Freshwater	4.24%
Peat	Environmental → Terrestrial → Peat	3.39%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.69%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Sediment	Environmental → Aquatic → Sediment	0.85%
Roots	Host-Associated → Plants → Roots	0.85%
Mycelium	Host-Associated → Fungi → Mycelium	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.69%
Loam	Environmental → Terrestrial → Soil → Loam	27.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.39%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.69%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.54%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.69%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.69%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	18.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.24%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.69%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.69%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012077	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ013 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019179	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZI2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030535	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO749-VDE026SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030624	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR005SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030761	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030863	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100179121	3300001471	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFAAIVTVSMLAFGLVSVSGQLSAQSRNLANGCAAAISAMVK*
JGI12712J15308_101097382	3300001471	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQFNAQSRNLANGCAAAISTMIK*
JGI12659J15293_1000088711	3300001546	Forest Soil	MSQHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLHAQSRHLADGCAAAISTMVK*
JGI12635J15846_105966302	3300001593	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTXAFATIVTVWMLGFALVSVSSELKADAHSFADGYAAAISTMVK*
JGIcombinedJ26739_1000278571	3300002245	Forest Soil	MSQHLASSGLYDEGLIDXRNARPLTIAFATIVTVWMLAFGLVSVSGQLHAQSRNLADGCAAAISTMVK*
JGIcombinedJ51221_100204004	3300003505	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK*
Ga0062385_104581961	3300004080	Bog Forest Soil	VVKYSEKVNRRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNERPLAVAFATIVTVWMLAFGLVSVSGQLHAQSRNLANGCAAAISTMVK*
Ga0058882_18105143	3300004121	Forest Soil	MSQHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLHAQSRNLADGCAAAISTMVK*
Ga0062386_1018358171	3300004152	Bog Forest Soil	SVGLYDESAIDDRNTRPLTIAFATIVMVWMLAFGLVFASAQIGAQSRHLVEGSAPAISTMVR*
Ga0062388_1023728321	3300004635	Bog Forest Soil	MSQHLANSGLYDEGLIDHRNERPLAVAFATIVTVWMLAFGLVSVSGQLHAQSRNLANGCAAA
Ga0066388_1047429582	3300005332	Tropical Forest Soil	MSRILANSGFYDEGLIDDRNERPLAVAFATILLVWTLAFGLTSVAGQPHAQPGHLAGDCARAISAMVR*
Ga0070660_1003144252	3300005339	Corn Rhizosphere	MSRNLANSSFYDTSLIDHRNERPLAVALSTILLVWTLAFGVASVSGQLHARSGHLATDCAQAVSTMVR*
Ga0070709_113752821	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSPILANSGFYDEGLIDHRNERPLAVAFATILLVWTLAFGLVSMSGELHAQSGNLADGCARAISTMMK*
Ga0070714_1014464801	3300005435	Agricultural Soil	MSQHLANSGLYDEGLIDDRNARPLTIAFATIVTVWMLAFGLVSASGQINAHSRNLTDGCAAILSTMVK*
Ga0070762_101513473	3300005602	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHPRNLAGGCAAALSTMVK*
Ga0070762_102370613	3300005602	Soil	MSRNLANSGFYDEGLIDHRNERPLAVAFATLLVWTLAFGLASVSGQVQTQSGNLASDCAQAISSIMR*
Ga0070763_101169204	3300005610	Soil	EKNRRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHPRNLAGGCAAALSTMVK*
Ga0070763_103771572	3300005610	Soil	MVKCGYEKNRRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK*
Ga0070763_109719041	3300005610	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHAHSFAEGCAAAISTMVK*
Ga0068856_1001471824	3300005614	Corn Rhizosphere	MSRNLANSSFYDTSLIDHRNERPLAVALSTILLVWTLAFGVASVSGQIHARSGHLATDCAQAVSTMVR*
Ga0070766_101616801	3300005921	Soil	GYEKNRRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK*
Ga0070717_111527023	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ANSGFYDESLIDHRNERPLAVAFATILIVWALAFGLVSLSSDLHAQSRHLADGCGQMFSTMVK*
Ga0075019_108246042	3300006086	Watersheds	MFRNSGNSGLYDEGLIDHRNERPLTIAFATIVTVWMLAFGLVSVSGHLNAQTRDLANGCAAAISTMVK*
Ga0075522_104141592	3300006638	Arctic Peat Soil	DEGLIDHRNERPLAVAFATILIVWALAFGLVSVSGRLHAQARSFADGCGAAISTMVR*
Ga0105240_101952854	3300009093	Corn Rhizosphere	MSRNLANSNFYDTSLIDHRNERPLAVALSTILLVWTLAFGVASVSGQIHARSGHLATDCAQAVSTMVR*
Ga0116129_10410731	3300009633	Peatland	MSQHLANSGLYDEGLIDHRNVRPLTIAFATIVTVWMLAFALVSVSSELKADAHSFADGYAAAISTMVK*
Ga0123355_109294193	3300009826	Termite Gut	RMTGEATMSRILGDSGFYDEGLIDHRNTRPLAVAFAAILLVWTVAFGLVSASGQLKAQTGNLFDGCAAAMSTMAR*
Ga0123356_103528331	3300010049	Termite Gut	MTGEATMSRILGDSGFYDEGLIDHRNTRPLAVAFAAILLVWTVAFGLVSASGQLKAQTGNLFDG
Ga0136449_1033750911	3300010379	Peatlands Soil	MSRIINSVWLCDEGAIDDRNARPLTIAFATIVMVWMLAFGLVFASTQIGAQSRHLVEGSASGISTIIR*
Ga0126357_13027483	3300010864	Boreal Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAHSRNLANGCAAAISTMVK*
Ga0150983_128229951	3300011120	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK*
Ga0153929_11051101	3300012077	Attine Ant Fungus Gardens	MSRILANSGFYDEGLIDHRNERPLAVAFATILIVWTLAFGLVSVSGQLHAQSGNLAGSCARVISTMMK*
Ga0150985_1081349971	3300012212	Avena Fatua Rhizosphere	MSRNLANSEFYDEGLIDHRNERPLAAAFAAILFVWAMAFGVASASGQIHASSGRLADDCARIISTIVR*
Ga0150984_1109875861	3300012469	Avena Fatua Rhizosphere	MSRNLANSEFYDEGLIDHRNERPLAAAFAAILFVWAMAFGVASASGEIHASSGRLADDCARIISTIVR*
Ga0167644_10251385	3300015206	Glacier Forefield Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQRNAQSRNLANGCAAAISTMVK*
Ga0167644_10539832	3300015206	Glacier Forefield Soil	MSQHLANSGLYDEGLIDHRNARPLKIAFTTIVMVWMLAFGLVSVSGQLNAHSRNLTDGCAQIMSTMAR*
Ga0137412_108491761	3300015242	Vadose Zone Soil	YDEGLIDDRNARPLTIAFATIVTVWMLAFGLVSASGQINAQSRNLTDGCAAIISTMVK*
Ga0184593_1088592	3300019179	Soil	MSQHLANSGLYDEGLIDRRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0210407_100166457	3300020579	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK
Ga0210407_109124842	3300020579	Soil	MVKCAYEKNRRGSYKRWAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK
Ga0210399_114939492	3300020581	Soil	ANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGHLNAQSRNLANGCAAAISTMVK
Ga0210405_106049341	3300021171	Soil	DCRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0210396_113604371	3300021180	Soil	MSQHLASSGLYDEGLIDHRNARPLTIAFATIVMVWMLAFGLVSVSGQLHAQSRNLADGCAAAISTMVK
Ga0213876_100214044	3300021384	Plant Roots	MSRILASSGFYDEGLIDHRNTRPLAVAFATILVVWTLAFGLVSLSDRLHAQSANLAGDCARAFSTMMK
Ga0210393_109686541	3300021401	Soil	MSRNLANSGFYDEGLIDHRNERPLAVAFATLLVWTLAFGLASVSGQVQTQSGNLASDCAQAISSIMR
Ga0210393_110252282	3300021401	Soil	NSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0210387_110804931	3300021405	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHPRNLAGGCAAALSTMVK
Ga0210387_115601151	3300021405	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLAN
Ga0210386_105095433	3300021406	Soil	MSRNLANSGFYDEGLIDHRNERPLAVAFATLLVWTLAFGLASVSGQVQTQSGNLASDCAQAISSI
Ga0210386_110035852	3300021406	Soil	MSQHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLHAQSRNLADGCAAAISTMVK
Ga0210386_112051971	3300021406	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0210394_115469672	3300021420	Soil	MSRHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK
Ga0210392_106998782	3300021475	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSAQVNAQSHNLANGCAAALSTMVK
Ga0210398_114018691	3300021477	Soil	SVYEMDRRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0210410_110494821	3300021479	Soil	VKCVYEMDRRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0213854_10079101	3300021855	Watersheds	RRQVWRATMSQHLANSGLYDEGLIDHRNERPLAVAFATIVTVWMLAFGLVSVSGHLHAQSRNLANGCAAAISTMVK
Ga0242644_10289621	3300022498	Soil	NSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCSAALSTMVK
Ga0242642_10169931	3300022504	Soil	RRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHPRNLAGGCAAALSTMVK
Ga0242648_10132263	3300022506	Soil	AIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHPRNLAGGCAAALSTMVK
Ga0222729_10154631	3300022507	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLDAQSRSLAKGCAAAIS
Ga0242663_10865122	3300022523	Soil	QHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLHAQSRNLADGCAAAISTMVK
Ga0242664_10459951	3300022527	Soil	RRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0242664_10815601	3300022527	Soil	RGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK
Ga0242669_10982272	3300022528	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGHAQSRNLTDGCAAAISTMVK
Ga0242669_11304971	3300022528	Soil	RGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0242669_11339251	3300022528	Soil	GSYITAVIWRATMSQHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLHAQSRNLADGCAAAISTMVK
Ga0242662_100784331	3300022533	Soil	RGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHPRNLAGGCAAALSTMVK
Ga0242653_10200381	3300022712	Soil	GSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQINAQSRNLADVCAAAISTMVK
Ga0242661_11368611	3300022717	Soil	LSSQAMARCGYEKNRRGSYKRQAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHPRNLAGGCAAALSTMVK
Ga0242675_10692271	3300022718	Soil	RQAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0242666_11944002	3300022721	Soil	YKRRVIWRATMSRHLASSGLYDEGLIDQRNARPLTIAFATIVTVWILAFGLVSVSGHAQSRSLTDGCAAAISTMVK
Ga0242657_10801972	3300022722	Soil	MSQHLANSSLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK
Ga0242654_100380564	3300022726	Soil	WRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGHLNAQSRNLANGCAAAISTMVK
Ga0208480_10111815	3300025633	Arctic Peat Soil	MSRNLANSDFYDEGLIDHRNERPLAVAFATILIVWALAFGLVSVSGRHHAQARSFADGCGAAISTMVR
Ga0207705_103723301	3300025909	Corn Rhizosphere	RVTNGGCYGDATMSRNLANSSFYDTSLIDHRNERPLAVALSTILLVWTLAFGVASVSGQIHARSGHLATDCAQAVSTMVR
Ga0207695_105205861	3300025913	Corn Rhizosphere	MSRNLANSNFYDTSLIDHRNERPLAVALSTILLVWTLAFGVASVSGQIHARSGHLATDCAQAVSTMVR
Ga0207657_103476883	3300025919	Corn Rhizosphere	MSRNLANSSFYDTSLIDHRNERPLAVALSTILLVWTLAFGVASVSGQLHARSGHLATDCAQAVSTMVR
Ga0179593_10097931	3300026555	Vadose Zone Soil	MSQHLANSGLYDEGLIDDRNARPLTIAFATIVTVWMLAFGLVSASGQINAQSRNLTDGCAAIISTMVK
Ga0209732_10185643	3300027117	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFAAIVTVSMLAFGLVSVSGQLSAQSRNLANGCAAAISAMVK
Ga0209525_10672121	3300027575	Forest Soil	SQHLANSGLYDEGLIDHRNARPLTIAFAAIVTVSMLAFGLVSVSGQLSAQSRNLANGCAAAISTMAK
Ga0209116_10693003	3300027590	Forest Soil	IWRATMSQHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLHAQSRNLADGCAAAISTMVK
Ga0209221_10599022	3300027609	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHAHSFAEGCAAAISTMVK
Ga0209221_11548001	3300027609	Forest Soil	MSQHLASSGLYDEGLIDHRNARPLTIALATIVSVWMLAFGLVSVSGQLHAQSRNLADGCAAA
Ga0209330_10248232	3300027619	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQFNAQSRNLANGCAAAISTMVK
Ga0209530_10195614	3300027692	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLGFALVSVSSELKADAHSFADGYAAAISTMVK
Ga0209624_100041556	3300027895	Forest Soil	MSQHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLHAQSRHLADGCAAAISTMVK
Ga0209624_103124511	3300027895	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLAIAFARIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK
Ga0209624_104281671	3300027895	Forest Soil	MSRNLANTGFYDEGLIDHRNERPLAVAFATILVVWTLAFGLVSLSGQLHAHPRSFADGCAAAISTMVK
Ga0209006_100685761	3300027908	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQFNAQSRNLANGCAAAISTMIK
Ga0209006_103643371	3300027908	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFAAIVTVSMLAFGLVSVSGQLNAQSRNLANGCAAAISAMVK
Ga0209006_107194062	3300027908	Forest Soil	MSQHLGNSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSASGQLNTQSRNLANGCAAAISTMVK
Ga0209006_107651401	3300027908	Forest Soil	MSRNLASSEFYDQGLIDHRNERPLAVAFATILVVWTLAFGLVSASGQLNAHPSSFADRCAAAISTMVK
Ga0302234_103809122	3300028773	Palsa	MSQHLANSGLYDEGLIDRRNARPLTIAFATIVTVWMLAFGLVSVSAQINAQSQHMA
Ga0308309_108359261	3300028906	Soil	MVKCGYEKNRRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAISTMVK
Ga0222749_106277171	3300029636	Soil	RKAGHFNRPFSECELHHILFSQAMVKCGYEKNRRGSYKRRAIWRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFALVSVSSELKAHPRNLAGGCAAALSTMVK
Ga0311339_108126731	3300029999	Palsa	MSQHLAYSDLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSLSSELKAHPHNLLSGGASAISTMVQ
Ga0210285_14907741	3300030535	Soil	MSQHLASSGLYDEGLIDHRNARPLTIAFATIVTVWILAFGLVSVSGHAQSRSLTDGCAAAISTMVK
Ga0311355_114431882	3300030580	Palsa	MSQHLAYSDLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSLSSELKAHPNNLPQGSAPAISTMVQ
Ga0210251_109473171	3300030624	Soil	WRATMSRHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGHAQSRNLTDGCAAAISTMVK
Ga0265460_114846121	3300030740	Soil	GSYKRRVIWRATMSRHLASSGLYDEGLIDQRNARPLTIAFATIVTVWILAFGLVSVSGHAQSRNLTDGCAAAISTMVK
Ga0265461_122750591	3300030743	Soil	MSQHLASSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGHAQSRNLTDGCAAAISTMVK
Ga0265722_1010561	3300030761	Soil	RNLANSGFYDEGLIDNRNERPLAVAFATLLIWTLAFGLVSVSGKVQAQPGNIASGCVQAISTMMR
Ga0265766_10076791	3300030863	Soil	MSHHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQVNAQSHNLANGCAAALSTMVK
Ga0075386_105127002	3300030916	Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSSNLANGCAAAIATMVK
Ga0170834_1040077501	3300031057	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAAMSTMVK
Ga0170824_1046294581	3300031231	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRSLANGCAAAISTMVK
Ga0170824_1048860422	3300031231	Forest Soil	MSRNLANSEFYDQGLIDHRNERPLAVAFATILIVWTLAFGLVSASGQINAHPRSFADGCAAAISTMVK
Ga0302324_1002587262	3300031236	Palsa	MSQHLANSGLYDEGLIDRRNARPLTIAFATIVTVWMLAFGLVSVSAQINAQSQHMAGIAASIAK
Ga0170820_157904612	3300031446	Forest Soil	MSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSRNLANGCAAA
Ga0170820_164699011	3300031446	Forest Soil	MVKSACEMDRRGSYKRRVMWRATMSRHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSVSGQLNAQSSNLANGCAAAISTMVK
Ga0310686_1122220392	3300031708	Soil	MSRNLANSGFYDEGLIDNRNERPLAVAFATLLIWTLAFGLVSVSGKVQAQPGNIASGCVQAISTMMR
Ga0310686_1179681381	3300031708	Soil	MSQHLASSGLYDEGLIDHRNARPLTIALATIVSVWMLAFGLVSVSGQLHAQSRNLADGCAAAISTMVK
Ga0307476_112714412	3300031715	Hardwood Forest Soil	AVGDKRRQVWRATMSQHLANSGLYDEGLIDHRNARPLTIALATIVTVWMLAFALVSVSGQFNAQSRNLANGCAAAISTMVK
Ga0308175_1010407351	3300031938	Soil	MSRNLANSRFYDEGLIDHRNERPLAVAFATILIVWTLAFGLVAASHELHAHPGHL
Ga0308176_100631696	3300031996	Soil	MSRNLANSGFYDEGLIDHRNERPLAVAFATILIVWTLAFGLVSASHELHAHPGHLAGDCARMISTMM
Ga0308173_120966961	3300032074	Soil	MSRNLANSRFYDEGLIDHRNERPLAVAFATILIVWTLAFGLVAASHELHAHPGHLAGDCARMISTMM
Ga0348332_125105701	3300032515	Plant Litter	RRATMSQHLANSGLYDEGLIDHRNARPLTIAFATIVTVWMLAFGLVSLSSELKAHPHNLLSGGASAISTMVQ
Ga0348332_136896422	3300032515	Plant Litter	MSQHLASSGLYDEGLIDHRNARPLTIALATIVTVWMLAFGLVSVSGQLHAQSRSLADGCAAAISTMVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076023

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences