Metagenome Family F075954

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075954
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	81 residues
Representative Sequence	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYENLSVKGRRRVVRLLTAKDKEVQKDQKIQ
Number of Associated Samples	84
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.58 %
% of genes near scaffold ends (potentially truncated)	22.88 %
% of genes from short scaffolds (< 2000 bps)	63.56 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.610 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.593 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.237 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.79% β-sheet: 5.61% Coil/Unstructured: 48.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01019	G_glu_transpept	43.22
PF02922	CBM_48	17.80
PF13710	ACT_5	3.39
PF02012	BNR	2.54
PF00106	adh_short	0.85
PF01904	DUF72	0.85
PF01494	FAD_binding_3	0.85
PF01261	AP_endonuc_2	0.85
PF07582	Obsolete Pfam Family	0.85
PF07702	UTRA	0.85
PF00005	ABC_tran	0.85
PF02775	TPP_enzyme_C	0.85
PF13490	zf-HC2	0.85
PF07969	Amidohydro_3	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	43.22
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.69
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.85
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.85
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.85
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.61 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.29 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.47 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.39 %
Unclassified	root	N/A	3.39 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.47 %
Unclassified	root	N/A	3.39 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.47 %
Unclassified	root	N/A	3.39 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.54 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10043029	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300002908\|JGI25382J43887_10243440	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300002909\|JGI25388J43891_1002375	All Organisms → cellular organisms → Bacteria	3926	Open in IMG/M
3300002914\|JGI25617J43924_10001510	All Organisms → cellular organisms → Bacteria	6072	Open in IMG/M
3300002914\|JGI25617J43924_10122160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300002914\|JGI25617J43924_10166246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300002914\|JGI25617J43924_10275125	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300005166\|Ga0066674_10306211	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300005167\|Ga0066672_10082710	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300005175\|Ga0066673_10573974	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300005176\|Ga0066679_10826292	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005177\|Ga0066690_10108190	All Organisms → cellular organisms → Bacteria → Acidobacteria	1793	Open in IMG/M
3300005178\|Ga0066688_10777779	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300005178\|Ga0066688_11003618	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300005180\|Ga0066685_10023332	All Organisms → cellular organisms → Bacteria	3745	Open in IMG/M
3300005187\|Ga0066675_10217152	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300005553\|Ga0066695_10000253	All Organisms → cellular organisms → Bacteria	14709	Open in IMG/M
3300005557\|Ga0066704_10376839	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005559\|Ga0066700_10157357	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300005561\|Ga0066699_10823509	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300005568\|Ga0066703_10069383	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300005568\|Ga0066703_10667047	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005569\|Ga0066705_10588011	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005586\|Ga0066691_10036086	All Organisms → cellular organisms → Bacteria	2584	Open in IMG/M
3300005586\|Ga0066691_10290041	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005586\|Ga0066691_10596392	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300005598\|Ga0066706_10584993	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300006755\|Ga0079222_11272466	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300006800\|Ga0066660_11060813	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006903\|Ga0075426_10004368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10042	Open in IMG/M
3300007258\|Ga0099793_10014299	All Organisms → cellular organisms → Bacteria	3152	Open in IMG/M
3300007265\|Ga0099794_10047422	All Organisms → cellular organisms → Bacteria	2060	Open in IMG/M
3300009012\|Ga0066710_101103270	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300009038\|Ga0099829_11648483	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300009088\|Ga0099830_10023670	All Organisms → cellular organisms → Bacteria	4043	Open in IMG/M
3300009088\|Ga0099830_10766961	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300009088\|Ga0099830_10999269	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300009090\|Ga0099827_10001383	All Organisms → cellular organisms → Bacteria	12478	Open in IMG/M
3300009137\|Ga0066709_100394634	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300009137\|Ga0066709_103776626	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300010321\|Ga0134067_10212982	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300010326\|Ga0134065_10095640	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300011269\|Ga0137392_10013417	All Organisms → cellular organisms → Bacteria	5526	Open in IMG/M
3300011269\|Ga0137392_10110634	Not Available	2178	Open in IMG/M
3300011269\|Ga0137392_10473184	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300011269\|Ga0137392_11167532	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300011270\|Ga0137391_10138412	Not Available	2118	Open in IMG/M
3300011270\|Ga0137391_10322846	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300011270\|Ga0137391_11526346	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300011271\|Ga0137393_11173973	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012096\|Ga0137389_10024878	All Organisms → cellular organisms → Bacteria	4264	Open in IMG/M
3300012096\|Ga0137389_10086335	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300012199\|Ga0137383_10045881	All Organisms → cellular organisms → Bacteria	3111	Open in IMG/M
3300012200\|Ga0137382_10754285	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300012202\|Ga0137363_10000044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	59036	Open in IMG/M
3300012202\|Ga0137363_10030552	All Organisms → cellular organisms → Bacteria	3717	Open in IMG/M
3300012202\|Ga0137363_10802057	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300012205\|Ga0137362_11592472	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300012206\|Ga0137380_10364430	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300012210\|Ga0137378_10108676	All Organisms → cellular organisms → Bacteria	2553	Open in IMG/M
3300012285\|Ga0137370_10708976	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300012361\|Ga0137360_10167996	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300012363\|Ga0137390_10099359	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300012363\|Ga0137390_10427445	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300012582\|Ga0137358_10304129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300012918\|Ga0137396_10128287	All Organisms → cellular organisms → Bacteria → Acidobacteria	1833	Open in IMG/M
3300012925\|Ga0137419_11395083	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300012930\|Ga0137407_11525988	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300015053\|Ga0137405_1147846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300015245\|Ga0137409_10001647	All Organisms → cellular organisms → Bacteria → Acidobacteria	24198	Open in IMG/M
3300018431\|Ga0066655_10000529	All Organisms → cellular organisms → Bacteria	12883	Open in IMG/M
3300018431\|Ga0066655_10001732	All Organisms → cellular organisms → Bacteria	7972	Open in IMG/M
3300018433\|Ga0066667_10050101	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300018468\|Ga0066662_12431236	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300018482\|Ga0066669_10166534	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300018482\|Ga0066669_10698012	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300020170\|Ga0179594_10001229	All Organisms → cellular organisms → Bacteria	5637	Open in IMG/M
3300020170\|Ga0179594_10252896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300020199\|Ga0179592_10021912	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
3300020579\|Ga0210407_11112185	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300021088\|Ga0210404_10263148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300021168\|Ga0210406_10465821	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300025939\|Ga0207665_10000014	All Organisms → cellular organisms → Bacteria → Acidobacteria	137803	Open in IMG/M
3300026277\|Ga0209350_1003266	All Organisms → cellular organisms → Bacteria	6024	Open in IMG/M
3300026301\|Ga0209238_1001003	All Organisms → cellular organisms → Bacteria	10688	Open in IMG/M
3300026309\|Ga0209055_1003738	All Organisms → cellular organisms → Bacteria	9212	Open in IMG/M
3300026309\|Ga0209055_1203191	Not Available	606	Open in IMG/M
3300026323\|Ga0209472_1256488	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300026325\|Ga0209152_10102941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300026333\|Ga0209158_1029461	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300026335\|Ga0209804_1338161	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300026527\|Ga0209059_1273531	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300026529\|Ga0209806_1301206	Not Available	538	Open in IMG/M
3300026538\|Ga0209056_10553393	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300026538\|Ga0209056_10583398	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300026542\|Ga0209805_1178924	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300026551\|Ga0209648_10003637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12994	Open in IMG/M
3300026551\|Ga0209648_10004164	All Organisms → cellular organisms → Bacteria	12252	Open in IMG/M
3300026551\|Ga0209648_10011469	All Organisms → cellular organisms → Bacteria	7709	Open in IMG/M
3300026551\|Ga0209648_10128761	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300026551\|Ga0209648_10376934	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300026551\|Ga0209648_10510450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300026552\|Ga0209577_10481990	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300027643\|Ga0209076_1009951	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300027671\|Ga0209588_1030217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1730	Open in IMG/M
3300027748\|Ga0209689_1058853	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300027862\|Ga0209701_10005446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8338	Open in IMG/M
3300027882\|Ga0209590_10005771	All Organisms → cellular organisms → Bacteria	5403	Open in IMG/M
3300031753\|Ga0307477_10090777	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300031753\|Ga0307477_10119649	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300031753\|Ga0307477_10180189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1472	Open in IMG/M
3300031754\|Ga0307475_10130392	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300031754\|Ga0307475_10203550	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300031962\|Ga0307479_11395060	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300032180\|Ga0307471_100060249	All Organisms → cellular organisms → Bacteria	3200	Open in IMG/M
3300032180\|Ga0307471_100177259	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300032180\|Ga0307471_100326510	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300032205\|Ga0307472_100608170	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.15%
Host-Associated	Host-Associated	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.15%
Plants	Host-Associated → Plants	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.46%
Loam	Environmental → Terrestrial → Soil → Loam	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.02%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	35.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	20.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_100430291	3300002907	Grasslands Soil	MATVTCDICGGIFNQSYLRSHKRLAHSKNRAAAAGPITEKEAIQKISSLYGSLSVKPRKRVVCLLTAKNRDVQKDQKIQ*
JGI25382J43887_102434402	3300002908	Grasslands Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAKDKDLEKGQKIQ*
JGI25388J43891_10023752	3300002909	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSLTAARPSTEKEAIQKIVSLYESLSIKARRRVVSLLTAKDKEVQKDQKTQ*
JGI25617J43924_100015104	3300002914	Grasslands Soil	MATVTCEICGGIFSQSYLPSHKRLAHNRNVPSAVSPIAEKEAIQKIASLYESLSVNGRKRVVRLLTARDREVQKNQKIQ*
JGI25617J43924_101221601	3300002914	Grasslands Soil	MATVKCDVCGGVFSESYLTSHKRLAHSKNDPSSVAAITENEAIRKIASLYESLSVNGQKHVVRLLTAK
JGI25617J43924_101662462	3300002914	Grasslands Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKLATAGPVTENEMIEKIASLYESLSVDGRKHVVRLLTAEERSTHKGKELG*
JGI25617J43924_102751252	3300002914	Grasslands Soil	MATVKCDICGGVFSKSYLTSHKRLAHSKNDPSSVAAITENEAMRKIASLYESLSVNGRKRVVRLLTAKDQKVPKV*
Ga0066674_103062111	3300005166	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKEAIQKIISLYESLSIKAQRHVVRLLTAKDKEVQKDQKTQ*
Ga0066672_100827102	3300005167	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYDSLSVKGRKRVIRLLTAKDKEVQKDQKTQ*
Ga0066673_105739741	3300005175	Soil	EYPTTDVACDSRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAKDKDLEKGEKIQ*
Ga0066679_108262922	3300005176	Soil	GVRMATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYDSLSVKGRKRVIRLLTAKDKEVQKDQKTQ*
Ga0066690_101081901	3300005177	Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAEDKDLEKGQKIQ*
Ga0066688_107777791	3300005178	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPSADRLSTEKEAIQKIVSLYESLSIKARRRVVSLLTAKDKEVQKDQ
Ga0066688_110036181	3300005178	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKETIQMIVSFYEKLSLKGRKRVARLLTAKDKEVQKDQKTQ*
Ga0066685_100233324	3300005180	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPSTEKEAIQKIVSLYESLSIKARRHVVRLLTAKDKEVQKDQKTQ*
Ga0066675_102171521	3300005187	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKEAIQKIVSLYDSLSIKARKRVVSLLAANDKEAQKDQKIQ*
Ga0066695_100002534	3300005553	Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAKDKDLEKGEKIQ*
Ga0066704_103768392	3300005557	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKETIQMIVSFYERLSLKGRMRVARLLTAKDKEAQKDQKIQ*
Ga0066700_101573572	3300005559	Soil	MATVKCDVCGGIFSQSYLPSHKRLAHRKNSLAAARPITEKEAIQKIVSLYESLSVKGRRRVVRLLTAKDKEVQKDQKIQ*
Ga0066699_108235092	3300005561	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKETIQMIVSFYERLSLKGRKRVARLLTAKDKEVQKDQKTQ*
Ga0066703_100693831	3300005568	Soil	GVRMATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKEAIQKIISLYESLSIKAQRHVVRLLTAKDKEVQKDQKTQ*
Ga0066703_106670472	3300005568	Soil	WHGAGVRMATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYDSLSVKGRKRVIRLLTAKDKEVQKDQKTQ*
Ga0066705_105880112	3300005569	Soil	GVRMATVTCDICGGIFSQSYLPSHKRLAHRKNSLTAARPSTEKEAIQKIVSLYESLSIKARRRVVSLLTAKDKEVQKDQKTQ*
Ga0066691_100360862	3300005586	Soil	MATVTCDICGGIFNQSYLRSHKRLAHSKNKAAAAGPITEKEAIQKISSLYGSLSVKARKRVVCLLTAKNRDVQKDQKIQ*
Ga0066691_102900411	3300005586	Soil	MATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAKDKDLEKGQKIQ*
Ga0066691_105963922	3300005586	Soil	MATVTCDICGGIFSQSYLLSHKRLAHRKNSPTAARPSSENEAIQKIVSLYETLSVKGRRRVVRLLTAKDKEVQKDQKIH*
Ga0066706_105849931	3300005598	Soil	WRGTGVGMATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKETIQMIVSFYEKLSLKGRKRVARLLTAKDKEVQKDQKTQ*
Ga0079222_112724662	3300006755	Agricultural Soil	MGRRVEALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMSEKEAIQKISSLYGNLSNKGRRRVVRLLAAKDKDLEKGQKIQ*
Ga0066660_110608131	3300006800	Soil	ATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYDSLSVKGRKRVIRLLTAKDKEVQKDQKTQ*
Ga0075426_100043682	3300006903	Populus Rhizosphere	MATVTCDICGGIFSQSYLPSHKRLAHRKNSLTAARPSTEKEAMQEIVSLYESLSVKGRRRVVRLLTAKDKEVQKDQKIQ*
Ga0099793_100142992	3300007258	Vadose Zone Soil	MATVTCDICGGIFNQSYLPSHKRLAHSKNRPSAAGPITEKEAIQKITSLYESLSIKSRKLVVRLLTKKGREIHKDQKIQ*
Ga0099794_100474222	3300007265	Vadose Zone Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKLATAGSVTENEMIEKIASLYESLSVDGRKHVVRLLTAEERSTHKGEELG*
Ga0066710_1011032701	3300009012	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIISLYESLSVKGRKRVIRLLTAKGKEVQKDQKTQ
Ga0099829_116484831	3300009038	Vadose Zone Soil	MATVKCDICGGVFSQSYLTSHKRLAHSKNDPSSVAPITENQAIKKIGSLYEGLSVNGRKHVVRILTAKDQKVLKDHKVQKPE*
Ga0099830_100236703	3300009088	Vadose Zone Soil	MATVTCDVCGGIFSQRYLASHKRLAHAKNGASTAAPITEKRVIQKIAFLYESLSVNGRKRVIRLLTVKDQRVQNDQKIQ*
Ga0099830_107669612	3300009088	Vadose Zone Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKLATAGPVTENEMIQKIASLYESLSVDGRKHVVRLLTAEERSTHKGEELG*
Ga0099830_109992692	3300009088	Vadose Zone Soil	MMDGGLEVSSMATVTCDICGGTFSQSYLPSHKRLAHRKNRPATVRPITEKEAMQKIASLYESLSVDGRKRVVRLLATKDKDVPRDQKIQ*
Ga0099827_100013834	3300009090	Vadose Zone Soil	MMDGGLEVSSMATVTCDICGGIFSQSYLPSHKRLAHSKNRRATAGPITEKEAIQKIASLYEGLSPSGRRRVVRLLTAKGREVHKDEKIQ*
Ga0066709_1003946342	3300009137	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIISLYESLSVKGRKRVIRLLTAKGKEVQKDQKTQ*
Ga0066709_1037766262	3300009137	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSLTAARPSTEKEAIQKIVSLYESLSIKARRRVVSLLTAKDKEVQKEQKTQ*
Ga0134067_102129822	3300010321	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPSADRLSTEKEAIQKIVSLYECLSAKGRKRVIHLLTAKGKEVQKDQKIQ*
Ga0134065_100956402	3300010326	Grasslands Soil	ATSVLQLLWRGTGVRMATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKEAIQKIISLYESLSIKAQRHVVRLLTAKDKEVQKDQKTQ*
Ga0137392_100134172	3300011269	Vadose Zone Soil	MMDGGLEVSSMATVTCDICGGTFSQSYLPSHKRLAHRKNRPATVRPITEKEAMQKIASLYEGLSASGRRRVVRLLTAKGREVHKDEKIQ*
Ga0137392_101106342	3300011269	Vadose Zone Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNMLVTAAAATENEMIQKIASLYESLSVDGRKHVVRLLTAEERSTHKGEELG*
Ga0137392_104731842	3300011269	Vadose Zone Soil	MATVICDVCGGIFSQSYLPSHKRLAHTKNRPATAGPITEKEAIQKIASLYESLSVNGRKRVVLLLTAKGREAHKDQKIQ*
Ga0137392_111675322	3300011269	Vadose Zone Soil	MATVTCEICGGIFSQSYLPSHKRLAHSKRSLSSAGPITEKEAMQKIASLYERLSVDGRKRVVRLLATKDKDVPRDQKIQ*
Ga0137391_101384122	3300011270	Vadose Zone Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKLATAGPVTENEMIEKIASLYESLSVDGRKHVVRLLTAEERSTHKGEELG*
Ga0137391_103228462	3300011270	Vadose Zone Soil	MGRTLGAFRMATVTCDVCGGIFSQRYLASHKRLAHAKNCESTASPITEKRVIQKIAALYESLSVDGRKRVIRLLTTKDQRVQKDHKIQ*
Ga0137391_115263461	3300011270	Vadose Zone Soil	MMDGGLEVSSMATVTCDICGGTFSQSYLPSHKRLAHRKNCFVKVRATTEKEAMQKIASLYEGLSASGRRRVVRLLTAKGREVHKDEKIQ*
Ga0137393_111739731	3300011271	Vadose Zone Soil	AAWGAFRMATVTCDVCGGIFSQRYLASHKRLAHAKNGASTAAPITEKRVMQKIASLYESLSVNGRKRVIRLLTVKDQRVQNDQKIQ*
Ga0137389_100248784	3300012096	Vadose Zone Soil	MATITCEICGGIFSKSYLPSHKRLAHSKRSLSSAGPITEKEAMQKIASLYESLSVDGRKRVVRLLATKDKDVPRDQKIQ*
Ga0137389_100863351	3300012096	Vadose Zone Soil	QSYLPSHKRLAHSKNRRATAGPITEKEAIQKIASLYAGLSASGRRRVVRLLTAKGREVHKDEKIQ*
Ga0137383_100458812	3300012199	Vadose Zone Soil	MATVTCEICGGIFSQSYLPSHKRLAHNRNAPSAISPITEKEAIQKIASLYESLSVNGRKRVVRLLTAKDKEVQKKQKIQ*
Ga0137382_107542852	3300012200	Vadose Zone Soil	MGRLVGALQMATVTCAICGGIFSQRYLPSHKRLAHSKRGYSASAPMSEKEAIQKISSLYGNLSNKGRRRVVRLLAAKDKDLEKGQKIQ*
Ga0137363_1000004428	3300012202	Vadose Zone Soil	MATVTCDICGGIFNQSYLRSHKRLAHSKNRAAAAGPITEKEAIQKISSLYGSLSVKARKRVVCLLTAKNRDVQKDQKIQ*
Ga0137363_100305522	3300012202	Vadose Zone Soil	MMDGGLEVSSMATVTCDICGGIFSQSYLPSHKRLAHRKNRPATVRPITEKEAMQKIASLYEGLSASGRRRVVRLLTAKGREVHKDEKIE*
Ga0137363_108020571	3300012202	Vadose Zone Soil	MATVTCDICGGIFSQSYLLSHKRLAHRKNSPTAARPSSENEAIQKIVSLYETLSVKGRRRVVRLLTAKDKEVQKDQKIQ*
Ga0137362_115924722	3300012205	Vadose Zone Soil	MATVTCDVCGGIFSQSYLPSHKRLAHSKNRSAAPGPITEKEVIRKIASLYESLSVKGRKSVVRLLTAKDREIHKDQKIQ*
Ga0137380_103644302	3300012206	Vadose Zone Soil	AFMMDSSLRVRMATVTCEICGGIFSQSYLPSHKRLAHNRNVPSAVSPITEKEAIQKIASLYESLPVNGRKRVVRLLTAKDKEVQKNQKIQ*
Ga0137378_101086762	3300012210	Vadose Zone Soil	MMDSSLRVRMATVTCEICGGIFSQSYLPSHKRLAHNRNAPSAISPITEKEAIQKIASLYESLSVNGRKRVVRLLTAKDKEVQKNQKIQ*
Ga0137370_107089762	3300012285	Vadose Zone Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSLTAAWPSTEKEVIQEIVSRYESLSVKGRKRVIRLLTAKGKEVQKDQKTQ*
Ga0137360_101679962	3300012361	Vadose Zone Soil	MMDGGLEVSSMATVTCDICGGIFSQSYLPSHKRLAHRKNRPTTVRPITEKEAMQKIASLYEGLSASGRRRVVRLLTAKGREVHNDEKIQ*
Ga0137390_100993592	3300012363	Vadose Zone Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKPATAGPVTENEMIQKIASLYESLSVDGRKHVVRLLTAEERSTHKGEELG*
Ga0137390_104274452	3300012363	Vadose Zone Soil	GGLEVSSMATVTCDICGGTFSQSYLPSHKRLAHRKNRPATVRPITEKEAMQKIASLYEGLSASGRRRVVRLLTAKGREVHKDEKIQ*
Ga0137358_103041291	3300012582	Vadose Zone Soil	MATVTCDICGGIFNQSYLPSHKRLAHSKNIFFAAAPITEKEAIQKITSLYESLSIKSRKLVVRLLTKKGREIHKDQKIQ*
Ga0137396_101282872	3300012918	Vadose Zone Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKLATAGPVTENEMIEKIASLDESLSVDGRKHVVRLLTAEERSTHKGKELG*
Ga0137419_113950831	3300012925	Vadose Zone Soil	RFAIIMGTAWGVRMSTVKCDVCGGIFSQSYLPSHKRLAHGKNAPSAVRPSTEKEAIQKIVSLYESLSVKARRRVVRLLTAKDKEVQRIRKSK*
Ga0137407_115259882	3300012930	Vadose Zone Soil	MATVTCDVCGGIFSQSYLPSHKRLAHSKNRPATAGPITEKEAIQNIASLYASLSFDGRKRVVRLLATKDKDVPEDQKIQ*
Ga0137405_11478462	3300015053	Vadose Zone Soil	MATVTCDICGGIFNQSYLRSHKRLAHSKNRAAAAGPITEKEAIQKISSLYGSLSVKARKRVVCLLTAKNR
Ga0137409_1000164719	3300015245	Vadose Zone Soil	MATVTCDICGGIFNQSYLPSHKRLAHSKNRPSAAGPITEKEAIQKITSLYESLSIKSRKLVVRLLTKKGREVQKDQKVQ*
Ga0066655_100005298	3300018431	Grasslands Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAKDKDLEKGQKIQ
Ga0066655_100017322	3300018431	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPSTEKEAIQKIVSLYESLSIKARRHVVRLLTAKDKEVQKDQKTQ
Ga0066667_100501013	3300018433	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKEAIQKIISLYESLSIKAQRHVVRLLTAKDKEVQKDQKTQ
Ga0066662_124312362	3300018468	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYENLSVKGRRRVVRLLTAKDKEVQKDQKIQ
Ga0066669_101665342	3300018482	Grasslands Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMSEKEAIQKISSLYGNLSNKGRRRVVRLLAAKDKDLEKGQKIQ
Ga0066669_106980121	3300018482	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPSADRPGTEREAIQEIVSLYESLSIKARRRVVSLLTAKDKEVEKDQKTQ
Ga0179594_100012294	3300020170	Vadose Zone Soil	MATVTCDICGGIFNQSYLRSHKRLAHSKNRAAAAGPITEKEAIQKISSLYGSLSVKARKRVVCLLTAKNRDVQKDQKIQ
Ga0179594_102528961	3300020170	Vadose Zone Soil	MATVTCDICGGIFNQSYLPSHKRLAHSKNRPSAAGPITEKEAIQKITSLYESLSIKSRKLVVRLLTKKGREIHK
Ga0179592_100219122	3300020199	Vadose Zone Soil	MATVTCDICGGIFNQSYLPSHKRLAHSKNRPSAAGPITEKEAIQKITSLYESLSIKSRKLVVRLLTKKGREIHKDQKIQ
Ga0210407_111121851	3300020579	Soil	MATVKCDVCGGVFSQSYLPSHKRLAHRRNGQIVVAPATEEEAIQKIASLFATLSVKGRRRVVRLLTAEDKEVQKDKKIQ
Ga0210404_102631481	3300021088	Soil	MATVTCDICGGIFIQSYLPSHKRLAHNKNRLAATGPITEKEAMQKIASLYESLSVKGQKRVIHLLTAKGREVHKDQKIQ
Ga0210406_104658212	3300021168	Soil	MATVTCDICGGIFSQSYLPSHKRLAHSKNRPATAGPISEKEAMQKIASLYESLSVKGQKRVIHLLTAKGREVHKDQKIQ
Ga0207665_1000001496	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MATVTCDVCGGIFSQSYLPSHKRLAHREDSPTAARPSSEKEAIQKIVSLYESLSVKARRRAVRLLTAKDKEVQKN
Ga0209350_10032664	3300026277	Grasslands Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAKDKDLEKGEKIQ
Ga0209238_10010032	3300026301	Grasslands Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSLTAARPSTEKEAIQKIVSLYESLSIKARRRVVSLLTAKDKEVQKDQKTQ
Ga0209055_10037387	3300026309	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYDSLSVKGRKRVIRLLTAKDKEVQKDQKTQ
Ga0209055_12031912	3300026309	Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAK
Ga0209472_12564881	3300026323	Soil	QMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAKDKDLEKGEKIQ
Ga0209152_101029411	3300026325	Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVVRLLAAED
Ga0209158_10294612	3300026333	Soil	MATVTCDICGGIFNQSYLRSHKRLAHSKNKAAAAGPITEKEAIQKISSLYGSLSVKARKRVVCLLTAKNRDVQKDQKIQ
Ga0209804_13381612	3300026335	Soil	LWRGTGVRMATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKEAIQKIISLYESLSIKAQRHVVRLLTAKDKEVQKDQKTQ
Ga0209059_12735312	3300026527	Soil	GGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYDSLSVKGRKRVIRLLTAKDKEVQKDQKTQ
Ga0209806_13012061	3300026529	Soil	MGRRVGALQMATVTCDICGGIFSQRYLPSHKRLAHSKRGYSASAPMIEKEAIQEIASLYGNLSNKGRRRVV
Ga0209056_105533931	3300026538	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSLTAARPSTEKEAIQKIVSLYESLSIKARRRVVSLLAANDKEAQKDQKIQ
Ga0209056_105833981	3300026538	Soil	FASATSVLQLLWHGAGVRMATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIISLYESLSVKGRKRVIRLLTAKGKEVQKDQKTQ
Ga0209805_11789242	3300026542	Soil	MATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAARPGTEKETIQMIVSFYERLSLKGRKRVARLLTAKDKEVQKDQKTQ
Ga0209648_100036372	3300026551	Grasslands Soil	MATVTCDICGGTFSQSYLPSHKRLAHRKNRPATVRPITEKEAMQKIASLYEGLSASGRRRVVRLLTVKDREVHKDEKIQ
Ga0209648_1000416410	3300026551	Grasslands Soil	MATVKCDICGGVFSQSYLTSHKRLAHSKNDLSSVAPITENQAIKKIASLYESLSVNGRKRVVRLLIAKDQKVPKDLKIQKPE
Ga0209648_100114697	3300026551	Grasslands Soil	MATVKCDICGGVFSKSYLTSHKRLAHSKNDPSSVAAITENEAMRKIASLYESLSVNGRKRVVRLLTAKDQKVPKV
Ga0209648_101287612	3300026551	Grasslands Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKLATAGPVTENEMIEKIASLYESLSVDGRKHVVRLLTAEERSTHKGEELG
Ga0209648_103769342	3300026551	Grasslands Soil	MATVKCDVCGGVFSESYLTSHKRLAHSKNDLSSVAAITENEAIRKIASLYESLSVNGRKHVVRLLTAKDQKAPKDQKIQKPE
Ga0209648_105104502	3300026551	Grasslands Soil	MATVTCEICRGIFSQSYLPSHKRLAHNRNAPSAVSPITEKEAIQKIASLYESLSVNGRKRVVR
Ga0209577_104819901	3300026552	Soil	AGVRMATVTCDICGGIFSQSYLPSHKRLAHRKNSPTAAGPGTEKEAIQKIVSLYDSLSVKGRKRVIRLLTAKDKEVQKDQKTQ
Ga0209076_10099512	3300027643	Vadose Zone Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKLATAGPVTENEMIEKIASLYESLSVDGRKHVVRLLTAEERSTHKGKELG
Ga0209588_10302172	3300027671	Vadose Zone Soil	MPTVKCDICGGIFSQSYLTAHKRLAHGKNKLATAGSVTENEMIEKIASLYESLSVDGRKHVVRLLTAEERSTHKGEELG
Ga0209689_10588532	3300027748	Soil	MATVKCDVCGGIFSQSYLPSHKRLAHRKNSLAAARPITEKEAIQKIVSLYESLSVKGRRRVVRLLTAKDKEVQKDQKIQ
Ga0209701_100054468	3300027862	Vadose Zone Soil	MATVKCDICGGVFSQSYLTSHKRLAHSKNDPSSVAPITENQAIKKIGSLYEGLSVNGRKHVVRILTAKDQKVLKDHKVQKPE
Ga0209590_100057712	3300027882	Vadose Zone Soil	MATVTCDICGGIFSQSYLPSHKRLAHSKNRRATAGPITEKEAIQKIASLYEGLSPSGRRRVVRLLTAKGREVHKDEKIQ
Ga0307477_100907772	3300031753	Hardwood Forest Soil	MATVTCDVCGGIFSRSYLSSHKRLAHSKNRPAVAGPITEKEAIRKIASLYEGLSVNGRRRVVRLLAAKGRQVRKDQKIQ
Ga0307477_101196492	3300031753	Hardwood Forest Soil	MATVTCDVCGGIFSQSYLSSHKRLAHSKNRPAVAGPITEKEVIRKIASLYEGLSVNGRRRVVRLLAAKGREIHKDKKSNQSGSGKCRY
Ga0307477_101801892	3300031753	Hardwood Forest Soil	MATVTCDVCGGIFSRSYLSSHKRLAHSKNRPAVAGPITEKEVIRKIASLYESLSVKGRKRVVRL
Ga0307475_101303922	3300031754	Hardwood Forest Soil	MATVTCDICGGIFSQSYLSSHKRLAHSKNRPAAAGPIPEKEAIQKIASLYESLSVKGQKRVIRLLAAKGREVHKDQKIQ
Ga0307475_102035502	3300031754	Hardwood Forest Soil	MATVTCDVCGGIFSQSYLSSHKRLAHSKNRPAVAGPITEKEVIRKIASLYESLSVKGRKRVVRLLTAKGR
Ga0307479_113950601	3300031962	Hardwood Forest Soil	MATVTCDVCGGIFSQSYLSSHKRLAHSKNRPAVAGPITEKEAIRKIASLYEGLSVNGRKRVVRLLTAKGREIHKDPKIQ
Ga0307471_1000602494	3300032180	Hardwood Forest Soil	MATVTCDICGGIFSQSYLSSHKRLAHSKNRPAAAGPIPEKEAIQKIASLYESLSVKGQKHVIRLLAAKGREVHKDQKIQ
Ga0307471_1001772592	3300032180	Hardwood Forest Soil	MMDGGLEVSSIATVACDIRGGIFNQSYLPSHKRLAHSKNGPSAAGPVTEKEATQKIASLYASLSVKARKRVVRLLTAKDREVQKD
Ga0307471_1003265102	3300032180	Hardwood Forest Soil	MATVTCDVCGGIFSQSYLSSHKRLAHSKNRPAVAGPITEKEAIRKIASLYEGLSVNGRRRVVRLLAAKGLEIHKDKKSNQSGSGKCRY
Ga0307472_1006081701	3300032205	Hardwood Forest Soil	MATVACDICGGIFNQSYLPSHKRLAHSKNGPSAAGPVTEKEATQKIASLYASLSVKARKRVVRLLTAKDREVQKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075954

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences