Metagenome / Metatranscriptome Family F075951

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075951
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	101 residues
Representative Sequence	VSTAASEPVPYRVVYSERARQRLLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE
Number of Associated Samples	84
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.04 %
% of genes near scaffold ends (potentially truncated)	35.59 %
% of genes from short scaffolds (< 2000 bps)	88.14 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.203 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.712 % of family members)
Environment Ontology (ENVO)	Unclassified (17.797 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.254 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.01% β-sheet: 16.06% Coil/Unstructured: 56.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF13561	adh_short_C2	3.39
PF07394	DUF1501	2.54
PF00294	PfkB	1.69
PF02604	PhdYeFM_antitox	1.69
PF03033	Glyco_transf_28	0.85
PF13495	Phage_int_SAM_4	0.85
PF01844	HNH	0.85
PF03358	FMN_red	0.85
PF01797	Y1_Tnp	0.85
PF09360	zf-CDGSH	0.85
PF13544	Obsolete Pfam Family	0.85
PF07690	MFS_1	0.85
PF00551	Formyl_trans_N	0.85
PF01032	FecCD	0.85
PF01261	AP_endonuc_2	0.85
PF14281	PDDEXK_4	0.85
PF03321	GH3	0.85
PF01850	PIN	0.85
PF05168	HEPN	0.85
PF15738	YafQ_toxin	0.85
PF04434	SWIM	0.85
PF05685	Uma2	0.85
PF03167	UDG	0.85
PF01979	Amidohydro_1	0.85
PF00106	adh_short	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.69
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.69
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.85
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.85
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.85
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.85
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.85
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.85
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.85
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.85
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.85
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.20 %
Unclassified	root	N/A	17.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.20 %
Unclassified	root	N/A	17.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.20 %
Unclassified	root	N/A	17.80 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	72.88 %
Unclassified	root	N/A	17.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	72.88 %
Unclassified	root	N/A	17.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	70.34 %
Unclassified	root	N/A	17.80 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	63.56 %
Unclassified	root	N/A	17.80 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.54 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.85 %
unclassified Planctomycetia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	63.56 %
Unclassified	root	N/A	17.80 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.85 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.85 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.85 %

Name	Rank	Taxonomy	Distribution
Telmatocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola	48.31 %
Unclassified	root	N/A	17.80 %
unclassified Gemmataceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae	9.32 %
Symmachiella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella	0.85 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.85 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.85 %

Name	Rank	Taxonomy	Distribution
Telmatocola sphagniphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	48.31 %
Unclassified	root	N/A	17.80 %
Gemmataceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	9.32 %
Symmachiella dynata	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella → Symmachiella dynata	0.85 %
Planctomycetia bacterium 21-64-5	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	0.85 %
Candidatus Kentron	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459008\|GA8OVOZ02H9DNF	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	535	Open in IMG/M
2170459009\|GA8DASG01BW52X	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	506	Open in IMG/M
2189573005\|GZGK9D401AORU1	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	529	Open in IMG/M
3300004114\|Ga0062593_100444783	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1178	Open in IMG/M
3300004468\|Ga0068977_1225514	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	748	Open in IMG/M
3300004478\|Ga0068972_1571279	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	906	Open in IMG/M
3300005176\|Ga0066679_10835000	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	585	Open in IMG/M
3300005181\|Ga0066678_10187176	Not Available	1316	Open in IMG/M
3300005328\|Ga0070676_11480576	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	522	Open in IMG/M
3300005332\|Ga0066388_100850048	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1498	Open in IMG/M
3300005332\|Ga0066388_102610701	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	920	Open in IMG/M
3300005332\|Ga0066388_105082252	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	668	Open in IMG/M
3300005332\|Ga0066388_107304758	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	555	Open in IMG/M
3300005436\|Ga0070713_100989208	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	811	Open in IMG/M
3300005532\|Ga0070739_10042507	All Organisms → cellular organisms → Bacteria	3086	Open in IMG/M
3300005532\|Ga0070739_10046586	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2879	Open in IMG/M
3300005532\|Ga0070739_10053120	Not Available	2607	Open in IMG/M
3300005554\|Ga0066661_10212292	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300005576\|Ga0066708_10928046	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	542	Open in IMG/M
3300005598\|Ga0066706_10727309	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → unclassified Planctomycetia → Planctomycetia bacterium 21-64-5	788	Open in IMG/M
3300005607\|Ga0070740_10133025	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1092	Open in IMG/M
3300005607\|Ga0070740_10152485	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	999	Open in IMG/M
3300005607\|Ga0070740_10322063	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	614	Open in IMG/M
3300005764\|Ga0066903_101478905	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1281	Open in IMG/M
3300005764\|Ga0066903_101735632	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	1190	Open in IMG/M
3300005764\|Ga0066903_102460449	Not Available	1008	Open in IMG/M
3300005764\|Ga0066903_105953707	Not Available	639	Open in IMG/M
3300005764\|Ga0066903_106234520	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	623	Open in IMG/M
3300005764\|Ga0066903_107450588	Not Available	565	Open in IMG/M
3300005764\|Ga0066903_107808567	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	550	Open in IMG/M
3300006028\|Ga0070717_10376726	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1272	Open in IMG/M
3300006028\|Ga0070717_11172592	Not Available	699	Open in IMG/M
3300006755\|Ga0079222_11453942	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	639	Open in IMG/M
3300006865\|Ga0073934_10498088	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	729	Open in IMG/M
3300006893\|Ga0073928_10368386	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1059	Open in IMG/M
3300009012\|Ga0066710_100921864	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1345	Open in IMG/M
3300009012\|Ga0066710_102455547	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	755	Open in IMG/M
3300009137\|Ga0066709_103837109	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	546	Open in IMG/M
3300009156\|Ga0111538_10443417	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1645	Open in IMG/M
3300009162\|Ga0075423_10867280	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	956	Open in IMG/M
3300009177\|Ga0105248_10771320	Not Available	1085	Open in IMG/M
3300009521\|Ga0116222_1016065	All Organisms → cellular organisms → Bacteria	3442	Open in IMG/M
3300009522\|Ga0116218_1141717	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1092	Open in IMG/M
3300009525\|Ga0116220_10015678	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300009698\|Ga0116216_10146366	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1452	Open in IMG/M
3300009792\|Ga0126374_11003280	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	655	Open in IMG/M
3300009870\|Ga0131092_11424134	Not Available	531	Open in IMG/M
3300010373\|Ga0134128_10612242	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1212	Open in IMG/M
3300010379\|Ga0136449_100871914	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Symmachiella → Symmachiella dynata	1473	Open in IMG/M
3300011065\|Ga0138533_1081838	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	503	Open in IMG/M
3300011090\|Ga0138579_1280732	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	765	Open in IMG/M
3300011120\|Ga0150983_10950271	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	545	Open in IMG/M
3300011269\|Ga0137392_11528281	Not Available	526	Open in IMG/M
3300011994\|Ga0120157_1043623	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	987	Open in IMG/M
3300012096\|Ga0137389_11440869	Not Available	584	Open in IMG/M
3300012189\|Ga0137388_10318603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Kentron	1429	Open in IMG/M
3300012199\|Ga0137383_10826013	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	676	Open in IMG/M
3300012208\|Ga0137376_11044209	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300012212\|Ga0150985_101426214	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	569	Open in IMG/M
3300012212\|Ga0150985_101940220	Not Available	514	Open in IMG/M
3300012212\|Ga0150985_108844463	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	733	Open in IMG/M
3300012212\|Ga0150985_111096937	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	1154	Open in IMG/M
3300012212\|Ga0150985_115363790	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	681	Open in IMG/M
3300012212\|Ga0150985_116223568	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	776	Open in IMG/M
3300012212\|Ga0150985_117041838	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	502	Open in IMG/M
3300012212\|Ga0150985_122258829	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	553	Open in IMG/M
3300012212\|Ga0150985_122960576	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	628	Open in IMG/M
3300012356\|Ga0137371_11293655	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	540	Open in IMG/M
3300012362\|Ga0137361_10539699	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012363\|Ga0137390_10407548	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300012381\|Ga0134026_1040312	Not Available	518	Open in IMG/M
3300012469\|Ga0150984_102530465	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	683	Open in IMG/M
3300012988\|Ga0164306_11368263	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	601	Open in IMG/M
3300015359\|Ga0134085_10438394	Not Available	591	Open in IMG/M
3300016294\|Ga0182041_11473045	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	626	Open in IMG/M
3300016319\|Ga0182033_10603941	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	953	Open in IMG/M
3300016319\|Ga0182033_11610402	Not Available	587	Open in IMG/M
3300016319\|Ga0182033_11894776	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	542	Open in IMG/M
3300016422\|Ga0182039_10026835	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3642	Open in IMG/M
3300016445\|Ga0182038_11378668	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	631	Open in IMG/M
3300018431\|Ga0066655_11061050	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	564	Open in IMG/M
3300018468\|Ga0066662_11584244	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	683	Open in IMG/M
3300018468\|Ga0066662_12671473	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	528	Open in IMG/M
3300018482\|Ga0066669_12265789	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	517	Open in IMG/M
3300021560\|Ga0126371_12963703	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	575	Open in IMG/M
3300022557\|Ga0212123_10124459	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2042	Open in IMG/M
3300025928\|Ga0207700_10590516	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	988	Open in IMG/M
3300027625\|Ga0208044_1019487	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2441	Open in IMG/M
3300027706\|Ga0209581_1180853	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300027706\|Ga0209581_1207588	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	614	Open in IMG/M
3300027773\|Ga0209810_1040215	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	2597	Open in IMG/M
3300027773\|Ga0209810_1044736	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2398	Open in IMG/M
3300027897\|Ga0209254_10721846	Not Available	684	Open in IMG/M
3300028648\|Ga0268299_1183997	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	517	Open in IMG/M
3300030494\|Ga0310037_10255573	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	759	Open in IMG/M
3300031679\|Ga0318561_10799172	Not Available	518	Open in IMG/M
3300031681\|Ga0318572_10383430	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	835	Open in IMG/M
3300031708\|Ga0310686_100001792	Not Available	796	Open in IMG/M
3300031753\|Ga0307477_10376969	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	973	Open in IMG/M
3300031768\|Ga0318509_10410585	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	757	Open in IMG/M
3300031770\|Ga0318521_10990746	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	515	Open in IMG/M
3300031879\|Ga0306919_10673820	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300031879\|Ga0306919_10726452	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	765	Open in IMG/M
3300031890\|Ga0306925_10722752	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1040	Open in IMG/M
3300031912\|Ga0306921_11376335	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	777	Open in IMG/M
3300031946\|Ga0310910_10994784	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	656	Open in IMG/M
3300032076\|Ga0306924_11179677	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	830	Open in IMG/M
3300032160\|Ga0311301_11052194	Not Available	1067	Open in IMG/M
3300032261\|Ga0306920_101788205	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	868	Open in IMG/M
3300032261\|Ga0306920_101977233	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	817	Open in IMG/M
3300032261\|Ga0306920_102822081	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	661	Open in IMG/M
3300032261\|Ga0306920_103453101	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300032515\|Ga0348332_14299091	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Telmatocola → Telmatocola sphagniphila	666	Open in IMG/M
3300032896\|Ga0335075_10092325	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	4003	Open in IMG/M
3300032896\|Ga0335075_11162047	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium	674	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.44%
Host-Associated	Host-Associated	11.86%
Engineered	Engineered	1.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.05%
Plants	Host-Associated → Plants	11.86%
Aquatic	Environmental → Aquatic	3.39%
Wastewater	Engineered → Wastewater	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.24%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.54%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.69%
Freshwater	Environmental → Aquatic → Freshwater	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.10%
Loam	Environmental → Terrestrial → Soil → Loam	14.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.69%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.69%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.85%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.54%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.69%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.69%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.85%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.47%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.39%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.69%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.85%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459008	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2189573005	Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004468	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004607	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011065	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 11 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300028648	Activated sludge microbial communities from bioreactor in Nijmegen, Gelderland, Netherland - NOB reactor	Engineered	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F48_03717640	2170459008	Grass Soil	VPYRVVYSERVRQRLLALADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLIDLTQEAGQVWLGTVRPLAMRYGVFDERRVVMVTEIPVLLPRSEPRESE
F47_00993800	2170459009	Grass Soil	VRQRLLALADVARERGDGEALLATLKEFDRRLRLYPQFGEPLIDLTQEKGQVWIGIIRPLAMRYTVLDERRLVVVAAIPVLLPNSESEKND
FG3_01638370	2189573005	Grass Soil	PYRVVYSERVRQRLLTLADVARERGDGEAFVAALREFHRRLCLYPQFGEPLIDLTREQGQVWIGIVRPLAMRYGVFDERRVVMVAAIPVLLPKSEVQESE
Ga0062593_1004447832	3300004114	Soil	VNGPSIEPFHVVYSDRVRQRLRELAQIARDRGDGFAFLAALTEFHRRLTLYPQFGEPLTDLLHEPGQIWIGIVPPLSMRYAVYDERRLVGVARLPVLLPRSKAESV*
Ga0068977_12255141	3300004468	Peatlands Soil	VSTAASEPVPYRVVYSERARQRLLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE*
Ga0068972_15712791	3300004478	Peatlands Soil	VSTAASEPVPYRVVYSERARQRLLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWFGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE*
Ga0068948_11626271	3300004607	Peatlands Soil	DVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE*
Ga0066679_108350001	3300005176	Soil	VSTAAPGPMPYRVVYAERVRQRLLALADAARQRGDGEAFLKALKEFHRRLGLYPQFGEPLVDLTQESGQVWIGIVRPLAMRYGVFDERRVVIVADIPVLLPKSEPPKSE*
Ga0066678_101871762	3300005181	Soil	GPTPYRVVYSERVRQRLLGLADMARERGDGEAFLAALKEFHRRLCVYPQFGEPLLDLTQESGQVWIGTVRPLAMRYGVFDDRRVVMVAALPVLLPKSEPQD*
Ga0070676_114805761	3300005328	Miscanthus Rhizosphere	VSDAASGPEPYRVVYSERVRQRLLALADVARERGDGEAFVAALREFDRRLRLYPQFGEPLIDLTREPGQVWLGTVPPLAMRYGVFDDRRVVMVAAIPVLLPKA*
Ga0066388_1008500483	3300005332	Tropical Forest Soil	VSTAPSEPVPYRVVYSERVRQRLLALADVARERGDGDAFVAAVKEIHRRLCLYPQFGEPLFDLTQEAGQVWLGIVRPLSMRYGVLDERRVVMVSELPVLLPKSETQESG*
Ga0066388_1026107012	3300005332	Tropical Forest Soil	MSTAAPAPAPYQVVYSERVRKRLLGLADVARERGDGEAFVAALKEFHRRLCVYPQFGDPLIDLAKEPGQVWIGIVRPLAMRYAVLDDRRLVMVGALPVLLPKSEAENSG*
Ga0066388_1050822521	3300005332	Tropical Forest Soil	VSTAAPGPTPYRVVYSERVRQRLLGLADMARSRGDGEAFLAALKEFHRRLCVYPQFGEPLLDLTQESGQVWIGTVRPLAMRYGVFDDRRVVMVAAL
Ga0066388_1073047581	3300005332	Tropical Forest Soil	AARRLHRRDRGKGKVKVSGAAPEPEPYRVVYSDRVRQRLLALADAARERGDGESFLAALREFDRRLRLYPQFGEPLTDLTHEPGQVWIGIVRPLAMRYGVFDERRVVMVAAIPVLLPKSES*
Ga0066388_1076304061	3300005332	Tropical Forest Soil	AGMARERGDGEAFLAALKEFQRRLCLYPQFGDPLLDLRHEQGQVWIGIIRPLAMRYGLYEGRRLVMVTAPPVLLPKSETGAGSG*
Ga0070713_1009892081	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSGAAPGPEPYRVVYSERVRQRLLTLADVARDRGDGEAFLAALREFDRRLRLYPQFGEPLTDLSREPGQVWIGIVRPLAMRYGVFDERRVVMVAAIPVLLPKSQP*
Ga0070739_100425073	3300005532	Surface Soil	VSIGTSGPLPYRVSYSERVRRRLLALADVARQRGDAEEFIAALKEFHRRLCVYPQFGEPLVDLTQEPGQLWIGIVHPLAMRYGVFDDRRVVLVAGIPVLLRAKGTGP*
Ga0070739_100465863	3300005532	Surface Soil	VSSGTSAPIPYRVSYSERVRRRLLGLADVARQRGDAEEFLAALKEFHRRLCVYPQFGEPLVDLTQEPGQMWIGIVHPLAMRYGVFDDRRIVLVAGIPVLLRSKGAGP*
Ga0070739_100531201	3300005532	Surface Soil	VSPAASGPVPYRVVYSERVRQRLLALADVARERGDGEAFLGAVKEFHRRLYLYPQFGEPLVDLTQESGQVWIGIIRPLAMRYAVFDER
Ga0066661_102122922	3300005554	Soil	MSTAAPGPMPYRVVYAERGRQRLLALADAARQRGDGEAFLKALKEFHRRLGLYPQFGEPLVDLTQESGQVWIGIVRPLAMRYGVFDERRVVIVADIPVLLPKSEPPKSE*
Ga0066708_109280461	3300005576	Soil	MPYRVVYAERVRQRLLALADIARQRGDGEAFLAALKEFHRRLCLYPQFGEPLIDLTQELGQVWIGIVRPLAMRYGIFDERRVVMVAAIPVLLPRSEPQESE*
Ga0066706_107273092	3300005598	Soil	VSTAAPGPTPYRVVYSERVRQRLLGLADMARERGDGEAFLAALKEFHRRLCVYPQFGEPLLDLTQESGQVWIGTVRPLAMRYGVFDDRRVVMVAALPVLLPKSEPQD*
Ga0070740_101330253	3300005607	Surface Soil	VSPAASGPVPYRVVYSERVRQRLLALADVARERGDGEAFLGAVKEFHRRLYLYPQFGEPLVDLTQESGQVWIGIIRPLAMRYAVFDERRVVMVTALPVLLPTYPSA*
Ga0070740_101524852	3300005607	Surface Soil	VSTAAPAPVPYRVVYSERVRQRLLGLADVARERGDGEAFVAALKEFHRRLCVYPQFGDPLIDLAQEPGQVWIGIVRPLAMRYAVLDGRRLVMVGALPVLLPKAQAETGD*
Ga0070740_103220631	3300005607	Surface Soil	VSAPASGPVPYRVVYSERVRQRLLALADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLIDLTQEAGQVWLGTVRPLAMRYGVFDERRLVMVTEVPVLLPQESPEDE*
Ga0066903_1014789051	3300005764	Tropical Forest Soil	MARQRGDAEEFLAALREFHNRLCVYPQFGEPLADLTQESGQIWIGIVHPLAMRYGVFDERRVVMVAGIPVLLRKSESGNGE*
Ga0066903_1017356323	3300005764	Tropical Forest Soil	VSAAAPEPVPYRVVYSERVRERLLALADTARERGDGEAFVAALKEFHRRLGLYPQFGDPLIDLTLEPGQVRLGIVRPLAMRYGVFDERRVVMVTELPVLLPKTEAQASE*
Ga0066903_1024604492	3300005764	Tropical Forest Soil	VSGVAPEPYRVVYSERVRQRLLTLADVARRRGDGEAFVAALREFDRRLRLYPQFGDPLADLTREPGQVCIGIVRPLAMHYGIFEERRVVMVAAIPVLLPKSET*
Ga0066903_1059537071	3300005764	Tropical Forest Soil	VSTASGPAPYRVVYSERVRERLPALADVARERGDGEAFVAALKEFHRRLCVYPQFGEPMADLTQEPGHVWMCIVRPLAMRYGIFEERRTVTVAAIPVLHPTSEPRDGE*
Ga0066903_1062345201	3300005764	Tropical Forest Soil	MPAPGPMPYRVVYSERVRQRLLDLADRARERGDGEAFLAALKEFHKRLSVYPQFGEPLADLTQESGQVWIGTIRPLAMRYGVFDDRRVVMVAALPVLLPKSEPEKNE*
Ga0066903_1074505881	3300005764	Tropical Forest Soil	RLPRRRPGTSEVQVSPAASPPMPYRVEYSEQVRQRLLASADMARQQGDGEEFVTALKEFERRLRTYSLFGEQLVDLKKEPGRVWIGTVWLLIMRYGVFDDR*
Ga0066903_1078085672	3300005764	Tropical Forest Soil	VSAAGSESVPYRVVYAERVRQRLLGLADLARERGDGESFLAAVKEFHRRLCLYPQFGEPLIDLTQEAGQVWLGVVRPLAMRYGVLEERRVVLVTEIPVLLPKS
Ga0070717_103767262	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSGAAPGPEPYRVVYSERVRQRLLTLADVARDRGDGEAFLAALREFDRRLRMYPQFGEPLTDLAREPGQVWIGIVRPLAMRYGVFDESRVVMVAAIPVLLPKSQP*
Ga0070717_111725921	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SERVRQRLLALADVARERGDGEAFLAAVKEFHRRLCLYPQFGEPLIDLTREPGQVWLGFVRPLAMRYGVFDERRLVMVVDMPVLLPKSEPQQGGG*
Ga0079222_114539421	3300006755	Agricultural Soil	MSGAAPGPEPYRVVYSERVRQRLLTLADVARDRGDGEAFLAALREFDRRLRMYPQFGEPLTDLSREPGQVGIGIVRPLAMRYGVFDERRVVM
Ga0073934_104980881	3300006865	Hot Spring Sediment	VSTAASGPVPYRVVYAERVRQRLLALADTARERGDGAAFVAAVKEIPRRLCLYPQFGEPLFDLRQEAGQVWLGIVRPLSMRYGVLEDRRVVMVSELPVLLPKSETQDSG*
Ga0073928_103683861	3300006893	Iron-Sulfur Acid Spring	VSAPASEPAPYRVAYSERVRQRLLALADVDRERGDGEAFLAALREFHRRLGLYPQFGEPLTDLTQEPGQVWLGFVRPLAMRYGVFDERRLVLVVDMPVLLPRSEPQQGG*
Ga0066710_1009218642	3300009012	Grasslands Soil	MPYQVVYSERVRQRLLALADAARERGDGDAFLAALKEFHRRLCLYPQFGEPLIDLTQELGQVWIGIVRPLAMRYGVFDERRVVMVAAIPVLLPRSEPQESE
Ga0066710_1024555472	3300009012	Grasslands Soil	VSTAAPGPTPYRVVYSERVRQRLLGLADMARERGDGEAFLAALKEFHRRLCVYPQFGEPLLDLTQESGQVWIGTVRPLAMRYGVFDNRRVVMVAALPVLLPKSEPQD
Ga0066709_1038371092	3300009137	Grasslands Soil	SYRVVYSERVRQRLLALADIARERGDGQVFVDALKEFHRRLCLYPQFGEPLIDLKQEFGQVWIGIVRPLAMRYGVFDERRVVMVAPIPVLLPKVESEESE*
Ga0111538_104434173	3300009156	Populus Rhizosphere	LLTLADHARQIGDGEAFLAALKEIDRRLRLYPHFGEPLTDLTGERGRVWIGIVRPLAMRYSVLDERRMVMVAVIPVLLPKSPS*
Ga0075423_108672801	3300009162	Populus Rhizosphere	VSSAAPEPYRVVYSERVRERLLTLADHARQIGDGEAFLAALKEIDRRLRLYPQFGEPPTDLTGERGRVWIGIVRPLAMRYSVLDERRMVMVAVIPVLLPKSPS*
Ga0105248_107713201	3300009177	Switchgrass Rhizosphere	NREVQVNGPSIEPFHVVYSDRVRQRLRELAQIARDRGDGFAFLAALTEFHRRLTLYPQFGEPLTDLLHEPGQIWIGIVPPLSMRYAVYDERRLVGVARLPVLLPRSKAESV*
Ga0116222_10160659	3300009521	Peatlands Soil	LLALADVARERGDGEAFLVALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQ
Ga0116218_11417171	3300009522	Peatlands Soil	LLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE*
Ga0116220_100156781	3300009525	Peatlands Soil	LLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSE
Ga0116216_101463662	3300009698	Peatlands Soil	RRAGSESEVQVSTAASEPVPYRVVYSERARQRLLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE*
Ga0126374_110032801	3300009792	Tropical Forest Soil	VNPAASEPVPYRVVYSERVRQRLLALADIARERGDGEAFLAALKEFHRRLCLYPQFGEPLLDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSEPQQSE*
Ga0131092_114241341	3300009870	Activated Sludge	PVLYRVVYSERVRQRLLDLADIARERGDGEAFLAALREFDRRLSLYPQFGEPMIDLPREPGQVWLGFVRPLAMRYGVFDESRVVLVTEIPVLLPRSEAQEDG*
Ga0134128_106122422	3300010373	Terrestrial Soil	VTTAASEPVPYRVVYSERVRQRLLALADIARERGDGEVFVAAVKEIHRRLCVYPQFGEPLFDLTLEVGQVWLGVVRPLSMRYGVLDDRRVVMVSELPVLLPKSETQDSG*
Ga0136449_1008719141	3300010379	Peatlands Soil	VAYSGQVRQRLLALADVARERGDGEAYLVALKEFDRRLHLYSQFGEQLIDLSQDLGQVWIGIVRPLAMRYGVFDNRRVVMISEIPVLLPKS*
Ga0138533_10818382	3300011065	Peatlands Soil	LLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLL
Ga0138579_12807321	3300011090	Peatlands Soil	LLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWFGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE*
Ga0150983_109502711	3300011120	Forest Soil	VRQRLLALADVARERGDGEAFLEAVKEFHRRLCLYPQFGEPLIDLTQELGQVWIGIVRPLAMRYGVFDERRVVMVAEIPVLLPKEAPESE*
Ga0137392_115282811	3300011269	Vadose Zone Soil	VSEAASGPVPYQVVYAERVRQRLLALADLARERGDGEAFLAAVKEFHSRLCLYPQFGDPLIDLTQDLGQVRIGIVRPLAMRYGVFEERRVVMVAALPVLLPKSEPQTSE*
Ga0120157_10436233	3300011994	Permafrost	MYSERVRQRLLALADVARTRGDGAAFVAALKEFHRRLCLYPQFGEPLVDLTQEAGQVWMGIVRPLSMRYGVFDERRVVMVAALPVLLSKSETRKSE*
Ga0137389_114408691	3300012096	Vadose Zone Soil	VKQRLLALANMAIERGDGEAFLAALKEFQRRLCLYPQFGDPLVDLASGQGQVWNGIIRPLAMRYGLYEERRLVMVTAPPVLLPKSGS*
Ga0137388_103186033	3300012189	Vadose Zone Soil	VSDAASGPVPYQVVYSESVRQRLLALADLARERGDGEAFLAAVKEFHSRLCLYPQFGDPLIDLTQDLGQVRIGIVRPLAMRYGVFEERRVVMVAALPVLLPKSEPQTSE*
Ga0137383_108260131	3300012199	Vadose Zone Soil	VLQRLRALGKVARERGDGEAYLAAVREFHRRLCLYPQFGDPLIDLTQEPGQIWIGIVRPLAMRYGVFDERRVVMVSGLPVLLPKSGPTDSQ*
Ga0137376_110442092	3300012208	Vadose Zone Soil	VLQRLRALGKVARESGDGEAYLAAVREFHRRLCLYPQFGDPLIDLTQEPGQIWIGIVHPLAMRYGVFDERRVVMVSGLPVLLPKSGPTDSQ*
Ga0150985_1014262141	3300012212	Avena Fatua Rhizosphere	VNASESGPSLYRVAYAERARQRLLALADVARKRGDGEAFLAAVKEFHRRLCLYPQFGEPVTDLTQESGQVWIGFVRPLAMRYGVFDERRAVMVTALPVLLPKSEPQQSE*
Ga0150985_1019402201	3300012212	Avena Fatua Rhizosphere	RLLALADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLIELTQELGQVWLGIVRPLAMRYGVFDERRVVMVAEIPVLLPKSEPQESA*
Ga0150985_1088444632	3300012212	Avena Fatua Rhizosphere	VSTATSVPEPYRVVYSERVRQRLLTLADVARGRGDGEAFVAALKEFDRRLHLYPQFGEPLNDLTHEPGQVWVGIVRPLAMRYGVFDERRMVMVATTPVLLPRSAA*
Ga0150985_1110969372	3300012212	Avena Fatua Rhizosphere	VRQRLLALADVARERGDGEAFLAALREFDRRLRLYPQFGEPLTDLTREPGQVWIGIVRPLAMRYGVIDERRVVIVAAIPVLLPKSEP*
Ga0150985_1153637902	3300012212	Avena Fatua Rhizosphere	MSTAAPAPAPYRVVYSERVRRRLLGLADIARGRGDGEALVAALKEFHRRLCVYPQFGDPLIDLRQEPGQVRIGIVRPLAMRYAVLDDRRLVMVGALPVLLPRSEAETSG*
Ga0150985_1162235681	3300012212	Avena Fatua Rhizosphere	VSHAASGPVLYRVAYSERVRQRLLALAEGARQRGDGEAFVAALHEFHRRLCLYPQYGEPLIDLTQELGQVWIGIVRPLAMRYGVFDERRVVMVAA
Ga0150985_1170418381	3300012212	Avena Fatua Rhizosphere	MSTAAPAPEPYRVVYSERVRQRLLSLADTARERGDGDAFVAALKEFHRRLRVYPQFGDPLIDLTQEPGQVWIGIVPPLSMRYSVLDDRRLVMVGALPVLLPKSKAETSE*
Ga0150985_1222588291	3300012212	Avena Fatua Rhizosphere	VSAAASESVPYRVVYSERVRQRLLALADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLIELTQEVGQVWLGIVRPLAMRYGVFDERRVVMVV
Ga0150985_1229605763	3300012212	Avena Fatua Rhizosphere	VSTDAPEPAPYRVTYSERVRQRLLALADVARERGDGEAFIAALKEFRRRLCLYPQFGEPLLDLKQETGQVWVGVVRPLAMRYGIIDER
Ga0137371_112936551	3300012356	Vadose Zone Soil	VPYRVVYSEPVRQRLLALADIARERGDGEAFLAALKEFHRRLCLYPQFGEPLIDLRQEVGQVWIGIVRPLAMRYGVFDERRVVMVAALPVLLPKTDLQQSE*
Ga0137361_105396993	3300012362	Vadose Zone Soil	LLALADIARERGDGEAFLAALKEFHRRLCLYPQFGEPLIDLAQELGQVWIGIVRPLAMRYGVFDGRRVVMVAAIPVLLPKSEPQNGE*
Ga0137390_104075483	3300012363	Vadose Zone Soil	MARERGDGEAFLAALKKFHRRLSVYPQFGEPLLDLTQESGQVWIGTVRPLAMRYGVFDDRRVVMVAALPVLLPKSEPQD*
Ga0134026_10403121	3300012381	Grasslands Soil	VSQAASAPLPYQVVYSQRVLQRLRALGKVARERGDGEAYLAAVREFHRRLCLYPQFGDPLIDLTQEPGQIWIGIVHPLAMRYGVFDQRRVVMVSGLPVLLPKSGPTDSQ*
Ga0150984_1025304652	3300012469	Avena Fatua Rhizosphere	VSAAASESVPYRVVYSERLRQRLLALADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLIELTQEVGQVWLGIVRPLAMRYGVFDERRVVMVAELPVLLPKSDPQGSQ*
Ga0164306_113682631	3300012988	Soil	VQMSGAAPGPEPYRVVYSERVRQRLLTLADVARDRGDGEAFLAALREFDRRLRLYPQFGEPLTDLSREPGQVWIGIVRPLAMRYGVFDERRVVMVAAIPVLLPKSQP*
Ga0134085_104383941	3300015359	Grasslands Soil	RQRLLVLSDVARERGDGEAFFAALKEFHRRLCLYPQFGEPLIDLRQEIGQVWIGVVRPLAMRYGVFDERRVVLVAALPVLRPTSDPQESE*
Ga0182041_114730451	3300016294	Soil	PEPYRVVYSERVRQRLLSLADMARERGDGEAFLAALKEFDRRLALYPQFGEPLTDLTQEPGQVWVGIVRPLAMRYGVLDDRRLVMVATLPVLLPKLDAPTSK
Ga0182033_106039413	3300016319	Soil	VSAPEPVPYQVVYSERVRQRLLALADVARERGDGAAFVAALREFHRRLCLYPQFGEPMIDLTQEPGQVWLGIVRPLAMRYGDFDERRVVMVADIPVLLP
Ga0182033_116104022	3300016319	Soil	VSMAASEPVPCRVVYSERVRQRLLALADVARERGDREAYVAAVKETHRRLCLYPPFGEPLFDLTQEAGQVWLWIVGPLSLRYGVLDDRRVVMVSELPVLLPRSETPDRG
Ga0182033_118947761	3300016319	Soil	VTAATSEPVPYQVVYSEQVRQRLLALADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLIELTQELDQVWMGIVRPLAMRYGVFDDRRAVMVTEIPVLLPKSETQE
Ga0182039_100268352	3300016422	Soil	VSTGASGPVPYWVVYSQQVRQRLLALADVARERGDGEVFLAALTEFHRRLCLYPQFGEPLLDLMQEPSQVWIGIIQPLAMRYGVFDDRRVVVVAALPVLLPKSEAENSH
Ga0182038_113786682	3300016445	Soil	VTTAQCEPVPYRVIYSERVRQRLLALADVARDRGEGEAFLVALKEFHRRLCLYPQFGEPLIDLTQESGQVWIGIIRPLAMRYGVFEERRLVMVAAIPVLLSKSEPQQGE
Ga0066655_110610501	3300018431	Grasslands Soil	LLVLADVARERGDGEAFLAAVREFHRRLCLYPQFGEPLVDLTQESGQVWIGIIRPLAMRYGVIDERRVVLVAALPVLLPKSESEKTE
Ga0066662_115842442	3300018468	Grasslands Soil	VSTAATGPIPYRVVYSERVRQRLLALADLARERGDGEAFLAALKEIHRRLCLYPQFGEPLIDLTQESGQVWIGIVRPLALRYGVFDERRLVMVAALPVLLPKSEPQTSD
Ga0066662_126714731	3300018468	Grasslands Soil	VSTAAPGPTPYRVVYSERVRQRLLGLADMARERGDGEAFLAALKEFHRRLSVYPQFGEPLLDLPQESGQVWIGTVRPLAMRYGVFDDRRVVMVAALPVLLPKSEPQD
Ga0066669_122657892	3300018482	Grasslands Soil	VSTAAPGPTPYRVVYSERVRQRLLGLADMARERGDGEAFLAALKEFHRRLCVYPQFGEPLLDLTQDSGQVWIGTVRPLAMRYGALDDRRVVIVAALPVLLPKS
Ga0126371_129637031	3300021560	Tropical Forest Soil	VSDPASGPVPYRVVYSERVRQRLLALTDVARERGDGEAFLAAVKEFHRRLCLYPQFGEPLIDLTQEAGQVWLGPVRPLAMRYGVFDERRVVMVTEVPVLLPRSEP
Ga0212123_101244595	3300022557	Iron-Sulfur Acid Spring	VPYRVAYSERVRQRLLALADAVRERGDGEAFLAALREFHRRLGLYPQFGEPLTDLTQEPGQVCLGFVRPLAMRYGVFDERRLVLVVDMPVLLPRSEPQQGG
Ga0207700_105905162	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSGAAPGPEPYRVVYSERVRQRLLTLADVARDRGDGEAFLAALREFDRRLRLYPQFGEPLTDLSREPGQVWIGIVRPLAMRYGVFDERRVVMVAAIPVLLPKSQP
Ga0208044_10194872	3300027625	Peatlands Soil	VSTAASEPVPYRVVYSERARQRLLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE
Ga0209581_11808531	3300027706	Surface Soil	LLGLADVARERGDGEAFVAALKEFHRRLCVYPQFGDPLIDLAQEPGQVWIGIVRPLAMRYAVLDGRRLVMVGALPVLLPKAQAETGD
Ga0209581_12075881	3300027706	Surface Soil	VSAPASGPVPYRVVYSERVRQRLLALADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLIDLTQEAGQVWLGTVRPLAMRYGVFDERRLVMVTEVPVLLPQESPEDE
Ga0209810_10402153	3300027773	Surface Soil	VSIGTSGPLPYRVSYSERVRRRLLALADVARQRGDAEEFIAALKEFHRRLCVYPQFGEPLVDLTQEPGQLWIGIVHPLAMRYGVFDDRRVVLVAGIPVLLRAKGTGP
Ga0209810_10447365	3300027773	Surface Soil	VSSGTSAPIPYRVSYSERVRRRLLGLADVARQRGDAEEFLAALKEFHRRLCVYPQFGEPLVDLTQEPGQMWIGIVHPLAMRYGVFDDRRIVLVAGIPVLLRSKGAGP
Ga0209254_107218462	3300027897	Freshwater Lake Sediment	VPAPVPYRVSYSQRVRQRLLSLADRARERGEGEAFLAALKELDRRLRLYPQFGDPLIDLRAESGHIRIAVIRPLVACYAELEERRLVVLTALPV
Ga0268299_11839972	3300028648	Activated Sludge	MTDEPGPAPYRVAYSQRVRERLLALADIARERGDGEAYLAALREFHRRLCLYPQFGEPLIDLKQESGQVWIGIVRPLAMRYGVFDERRLVMVSALPVLLPK
Ga0310037_102555732	3300030494	Peatlands Soil	RLLALADVARERGDGEAFLAALREFHRRLCLYPQFGEPLIDLTQELGQVWLGIVRPLAMRYGVFDERRVVMVADIPVLLPKSETQESE
Ga0318515_107785711	3300031572	Soil	ADMARERGDGEAFLAALKEFDRRLALYPQFGEPLTDLTQEPGQVWVGIVRPLAMRYGVLDDRRLVMVATLPVLLPKLDAPTSK
Ga0318561_107991721	3300031679	Soil	VVYSERVRQRLLALADVARERGDGAAFVAALREFHRRLCLYPQFGEPMIDLTQEPGQVWLGIVRPLAMRYGDFDERRVVMVADIPVLLPKSQTPESA
Ga0318572_103834302	3300031681	Soil	VSTGASGPVPYWVVYSQQVRQRLLALADVARERGDGEVFLAALTEFHRRLCLYPQFGEPLLDLMQEPSQVWIGIIRPLAMRYGVFDDRRVVVVAALPVLLPKSEAENSH
Ga0310686_1000017922	3300031708	Soil	VSGAAGPVPYRVVYSERVRQRFLTLADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLSELTQEVGQVWIGTVRPLFMRYGVFDERRIVMVAAIPVLLPKSEPSDSP
Ga0307477_103769692	3300031753	Hardwood Forest Soil	MSVAASQPVPYRVVYSERARQRLLALADVARERGDGEAFLAALNEFHRRLCLYPQFGEPLIDLTQALGQVWLGVLRPLAMRYGVFDERRVVMVAEVPVLLPKSETQESE
Ga0318509_104105851	3300031768	Soil	VSTGASGPVPYWVVYSQQVRQRLLALADVARERGDGEVFLAALTEFHRRLCLYPQFGEPLLDLMQEPSQVWIGIIRPLAMRYGVFDDRRVVVVAALPVL
Ga0318521_109907462	3300031770	Soil	ARRLHRPAPSESEVQVSTGASGPVPYWVVYSQQVRQRLLALADVARERGDGEVFLAALTEFHRRLCLYPQFGEPLLDLMQEPSQVWIGIIRPLAMRYGVFDDRRVVVVAALPVLLPKSEAENSH
Ga0306919_106738202	3300031879	Soil	QQVRQRLLALADVARERGDGEVFLAALTEFHRRLCLYPQFGEPLLDLMQEPSQVWIGIIRPLAMRYGVFDDRRVVVVAALPVLLPKSEAENSH
Ga0306919_107264522	3300031879	Soil	VTAATSEPVPYQVVYSEQVRQRLLALADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLIELTQELDQVWMGIVRPLAMRYGVFDDRRAVMVTEIPVLLPKSETQEGE
Ga0306925_107227522	3300031890	Soil	VSTAAPAPEPYRVVYSERVRQRLLSLADMARERGDGEAFLAALKEFDRRLALYPQFGEPLTDLTQEPGQVWVGIVRPLAMRYGVLDDRRLVMVATLPVLLPKLDAPTSK
Ga0306921_113763352	3300031912	Soil	VSTGTSGPTPYRVSYSERVRQRLLALADIARQRGDAEEFLAALREFHRRLCVYPQFGEPLTDLTREAGQIWIGIVHPLAMRYGVFDERRAVMVTGIPVLLRKSEPGNSQ
Ga0310910_109947841	3300031946	Soil	PYWVVYSQQVRQRLLALADVARERGDGEVFLAALTEFHRRLCLYPQFGEPLLDLMQEPSQVWIGIIRPLAMRYGVFDDRRVVVVAALPVLLPKSEAENSH
Ga0306924_111796773	3300032076	Soil	VSTVASGPLPYRVVYSEQVRQRLLALADFARDRGDAERFLSAVKEFHRRLCLYPQFGEPLIDLSQELGQVWIGIVRPLAMRYGVLDERRVVMVAAIPVLLPKSEPDENE
Ga0311301_110521943	3300032160	Peatlands Soil	VSIGGSDPKPYRVAYSGQVRQRLLALADVARERGDGEAYLVALKEFDRRLHLYSQFGEQLIDLSQDLGQVWIGIVRPLAMRYGVFDNRRVVMISEIPVLLPKS
Ga0306920_1017882052	3300032261	Soil	VSTAASEPVPYRVVYAQQVRQRLLALADVARQRGDGDAFVAAVKEIHRRLCLYPQFGEPLFDLTQEPGQVWLGIVRPLIMRYGVLDDRRVVMVSELPVLLPKSEAETSA
Ga0306920_1019772331	3300032261	Soil	VSTAAPEPVPYRVAYSERVRQRLLALADTARERGDGETFLTALKEFHRRLCLYPQFGEPLVDLKHEAGQVWVGVVRPLAMRYGVFDERRVVT
Ga0306920_1028220813	3300032261	Soil	VSIGASGPTPYRVSYSDRVRRRLLALADMARQRGDAEEFLAALREFHNRLCVYPQFGEPLADLTQESGQIWIGIVHPLAMRYGVFDERRVVMVAGMP
Ga0306920_1034531012	3300032261	Soil	VSAAAPEPVPYRVVYSERVRQRLLTLADVARERGDGEAFLAALKEFHRRLCLYPQFGEPLSDLTQEPGQVWLGTVRPLAMRYGVFDERRVVTVTEIPVLLPKPGPQESE
Ga0348332_142990911	3300032515	Plant Litter	VSAPASGPAPYRVVYSERVRQRLLALADVARERGDGEAYLAALKEFHRRLCLYPQFGEPLIDLTQEAGQVWLATVRPLAMRYGVFDERRIVMVTEVPVLLPRSAPQERA
Ga0335075_100923253	3300032896	Soil	VSAAASEPLPYRVVYSDRVRQRLLALADVARERGDGEAFLAALNEFHRRLCLYPQFGEPLIDLTQELGQVCLGIVRPLAMRYGIFDERRVVMVTETPVLLPKSAPPESK
Ga0335075_111620472	3300032896	Soil	VSEAAAPYRVVLSDRVKQRLLELANLARQRGDGEAYMAALKDFQRRLSVYPQFGDPLVDLTHPRGQIWNGIIRPLAMRYAIYEDLRLVAITAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075951

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences