NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075918

Metagenome / Metatranscriptome Family F075918

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075918
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 126 residues
Representative Sequence MGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA
Number of Associated Samples 94
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 68.64 %
% of genes near scaffold ends (potentially truncated) 39.83 %
% of genes from short scaffolds (< 2000 bps) 89.83 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.864 % of family members)
Environment Ontology (ENVO) Unclassified
(23.729 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.373 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168
1ICChiseqgaiiDRAFT_20815921
2JGI10216J12902_1107620262
3C688J35102_1189181041
4C688J35102_1198754731
5Ga0063454_1006865971
6Ga0063455_1008705321
7Ga0063356_1013294311
8Ga0063356_1019527532
9Ga0063356_1031841282
10Ga0063356_1051687451
11Ga0058859_117306051
12Ga0058860_122046711
13Ga0066671_104133591
14Ga0070683_1008103812
15Ga0066388_1054773432
16Ga0070689_1016763961
17Ga0070688_1018150811
18Ga0070741_103674272
19Ga0070684_1017937331
20Ga0070664_1015327651
21Ga0066708_107751251
22Ga0066696_105102672
23Ga0066652_1020025641
24Ga0066658_107250221
25Ga0075428_1000292136
26Ga0075421_1002400924
27Ga0079218_102462882
28Ga0079218_111759301
29Ga0066710_1003487682
30Ga0066710_1007690252
31Ga0105048_100090613
32Ga0111539_114425091
33Ga0066709_1026012052
34Ga0111538_132776151
35Ga0126313_105373261
36Ga0131077_102737542
37Ga0126304_105722641
38Ga0126315_102240882
39Ga0126309_107011412
40Ga0126308_103112812
41Ga0126308_111499041
42Ga0126312_102981672
43Ga0126314_103332212
44Ga0126310_102051532
45Ga0126310_117664601
46Ga0126306_104310842
47Ga0126306_114209892
48Ga0116237_102085202
49Ga0134123_119892152
50Ga0136610_11808782
51Ga0136620_100188504
52Ga0137374_100923682
53Ga0137380_105072922
54Ga0137379_116995111
55Ga0150985_1041782051
56Ga0150985_1068084222
57Ga0150985_1097040632
58Ga0150985_1102640572
59Ga0150985_1113338902
60Ga0150985_1119672661
61Ga0150985_1170635391
62Ga0150985_1219891092
63Ga0150985_1225479841
64Ga0137372_100349162
65Ga0137372_109995642
66Ga0137386_111501591
67Ga0137367_103091941
68Ga0137371_105192582
69Ga0137368_108667841
70Ga0150984_1063269121
71Ga0150984_1172640892
72Ga0150984_1221387171
73Ga0137373_110997951
74Ga0136611_100225703
75Ga0136614_112108461
76Ga0164299_113917431
77Ga0163163_116370901
78Ga0173483_109666311
79Ga0132258_1001420218
80Ga0132257_1039647081
81Ga0183260_107334381
82Ga0136617_107473201
83Ga0163161_111302961
84Ga0190265_116625622
85Ga0066667_114401901
86Ga0190268_110243001
87Ga0190274_126260802
88Ga0066669_111148101
89Ga0066669_114309802
90Ga0206356_119113752
91Ga0196959_101662431
92Ga0224712_106059971
93Ga0224712_106073371
94Ga0207646_114843711
95Ga0207661_105898372
96Ga0209474_101736242
97Ga0209814_101753722
98Ga0209181_100926992
99Ga0209486_104091282
100Ga0307276_101158012
101Ga0307297_100871502
102Ga0102757_112836211
103Ga0308202_11231812
104Ga0308202_11646311
105Ga0102746_109170892
106Ga0308189_101920051
107Ga0308189_102689301
108Ga0308201_101293972
109Ga0308199_11506922
110Ga0170824_1261314512
111Ga0308194_102991741
112Ga0272434_12820391
113Ga0307408_1018991371
114Ga0308176_127130691
115Ga0310890_108300461
116Ga0314780_065457_172_564
117Ga0314786_189387_2_406
118Ga0314793_113036_195_539
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.50%    β-sheet: 0.00%    Coil/Unstructured: 37.50%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110120MGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKASequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Polar Desert Sand
Freshwater
Soil
Vadose Zone Soil
Terrestrial Soil
Serpentine Soil
Surface Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Soil
Rock
Host-Associated
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Arabidopsis Thaliana Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
Wastewater
Anaerobic Digestor Sludge
5.1%11.9%8.5%10.2%6.8%5.1%4.2%3.4%7.6%3.4%4.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_208159213300000033SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDXGHPXQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGAR
JGI10216J12902_11076202623300000956SoilYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGGGEPRGDVPPKA*
C688J35102_11891810413300002568SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA*
C688J35102_11987547313300002568SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLGRRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGGEPRGDVPPKA*
Ga0063454_10068659713300004081SoilGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA*
Ga0063455_10087053213300004153SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGGEPRGDVPRGDV
Ga0063356_10132943113300004463Arabidopsis Thaliana RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG*
Ga0063356_10195275323300004463Arabidopsis Thaliana RhizosphereMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLDDGHPEQVWDFCAWDCAVNFGLARRKGPVGDMVRELGDRLMAAGAPEDDYISALDQERSRRMQRRSAAQREVHALLEQLEQGAAGDSKAD*
Ga0063356_10318412823300004463Arabidopsis Thaliana RhizosphereRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGDIPPKA*
Ga0063356_10516874513300004463Arabidopsis Thaliana RhizosphereMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVGDMVRELGDRLMAAGAPEDDYISALDQEKSRRIQRRSAAQREVHALLEQLEQGAAGDSKSDSLS*
Ga0058859_1173060513300004798Host-AssociatedMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGGGEPRGDVPPKA*
Ga0058860_1220467113300004801Host-AssociatedCRMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG*
Ga0066671_1041335913300005184SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKA*
Ga0070683_10081038123300005329Corn RhizosphereGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGGEPRGDVPPKA*
Ga0066388_10547734323300005332Tropical Forest SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKRPVDDPVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDGPPKA*
Ga0070689_10167639613300005340Switchgrass RhizosphereMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL*
Ga0070688_10181508113300005365Switchgrass RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEP
Ga0070741_1036742723300005529Surface SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGESRGGDVPPKA*
Ga0070684_10179373313300005535Corn RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEQPRGDVPPKA*
Ga0070664_10153276513300005564Corn RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGGDQRGGEPRGDVPRGDVPPKP*
Ga0066708_1077512513300005576SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLGRRKGPVGDLVREFGDRVMAAGAAEEDYLSALDQERSRREQRRSAVQRDVRTLLEELERGAP
Ga0066696_1051026723300006032SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAAEEDYLGALDQERSRREQRRSAVQRDVRSLLEELERGAPGESKGDSSKH*
Ga0066652_10200256413300006046SoilMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAAEEDYLSALDQERSRREQRRSAVQRDVRTLLEELERGAPGEPKGDTSKH*
Ga0066658_1072502213300006794SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMSAGALEDEYLSALDQERTRREQRRNAAQRDVRSLLEELERGATGDAKGDSGKL*
Ga0075428_10002921363300006844Populus RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG*
Ga0075421_10024009243300006845Populus RhizosphereRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG*
Ga0079218_1024628823300007004Agricultural SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG*
Ga0079218_1117593013300007004Agricultural SoilMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLTALDQERTRRQQRRTAAQRD
Ga0066710_10034876823300009012Grasslands SoilMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCAWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGALEEDYLTALDQERSRREQRRSAVQRDVRSLLDELERGATGESKGDGKL
Ga0066710_10076902523300009012Grasslands SoilMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLSRRKGPVGDLVRELGDRVMASGALEEDYLGALDQERSRREQRRSAVQRDVRSLLDELERGATGDSKGDNKV
Ga0105048_1000906133300009032FreshwaterMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCTWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGNEPHSDVPRGDVPPKADG*
Ga0111539_1144250913300009094Populus RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLGRRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRDQRRQNAQRDVRNLLEELERGARGGEARGDGPPKA*
Ga0066709_10260120523300009137Grasslands SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLGRRKGPVGDLVREFGDRVMAAGAAEEDYLSALDQERSRREQRRSAVQRDVRTLLEELERGAPGEPKGDTSKH*
Ga0111538_1327761513300009156Populus RhizosphereMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGIARRRGPVGDMVRELGDRLMAAGAPEDDYISALDQEKSRRVQRRSAAQREVHALLEQLEQGATGDSKSDSLG*
Ga0126313_1053732613300009840Serpentine SoilMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVGDMVRELGDRLMAAGAPEDDYISALDQEKSRRVQRRSAAQREVHALLEQLEQGATGDSKSDSLG*
Ga0131077_1027375423300009873WastewaterMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQREVRNLLEELERGARGEPRGDGPPKA*
Ga0126304_1057226413300010037Serpentine SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVGDLVRELGDRLMAAGAPEDDYLSALDQERSRREQRKTAAQRDVRSLLEQLEQGA
Ga0126315_1022408823300010038Serpentine SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGGEPRGDVPRGDVPPKA*
Ga0126309_1070114123300010039Serpentine SoilMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVGDLVRELGDRLMAAGAPEDDYLSALDQERSRREQRKTAAQRDVRSLLEQLEQGARGESKGDAPPKA*
Ga0126308_1031128123300010040Serpentine SoilWLELHWDVLDDGHPEKVWDFCSWECTVNFGLARRRGPVDDLVRELGDRLMAAGAPEDDYLSALEIERPRRHQRRQNAQRDVRNLLEELERGARGEPRGPEPRGDVPRGDVPPKA*
Ga0126308_1114990413300010040Serpentine SoilVNWNDVQERRTWLELHWDVLDEGHHEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL*
Ga0126312_1029816723300010041Serpentine SoilVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLGRRKGPVGDLVRELGDRVMAAGASEEDYLGALDQERTRREQRRSAVQRDVRTLLEELERGAPGESKGDGSKH*
Ga0126314_1033322123300010042Serpentine SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGPEPRGDVPRGDVPPKA*
Ga0126310_1020515323300010044Serpentine SoilMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLDDGHPEQVWDFCCWDCAVNFGLARRKGPVGDMVRELGDRLMAAGAPEDDYISALDQEKGRRLQRRSAAQREVHALLEQLEQGALGENKGDNKGELR*
Ga0126310_1176646013300010044Serpentine SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKA*
Ga0126306_1043108423300010166Serpentine SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGA
Ga0126306_1142098923300010166Serpentine SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALDQERSRREQRKTAAQRDVRSLLEQLEQGARGESKGDAPPKA*
Ga0116237_1020852023300010356Anaerobic Digestor SludgeMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCTWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGESRGNEPRGDVPRGDVPPKG*
Ga0134123_1198921523300010403Terrestrial SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGVPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG*
Ga0136610_118087823300012184Polar Desert SandYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCAWDCAVNFGLARRKGPVGDLVRELGDRLMAAGAPEDDYLSALDQERSRREQRKTAAQRDVRSLLEQLEQGARGESKGDAPPKA*
Ga0136620_1001885043300012186Polar Desert SandMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCAWDCAVNFGLARRKGPVGDLVRELGDRLMAAGAPEDDYLSALDQERSRREQRKTAAQRDVRSLLEQLEQGARGESKGDAPPKA*
Ga0137374_1009236823300012204Vadose Zone SoilMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCAWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLTALDQERTRRQQRRSAAQRDVRNLLEQLEQGARGETKGDGPPKT*
Ga0137380_1050729223300012206Vadose Zone SoilMGAYKRCDYCGPTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCAWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGALEEDYLTALDQERSRREQRRSAVQRDVRSLLDELERGATGESKGDGKL*
Ga0137379_1169951113300012209Vadose Zone SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAAEEDYLSALDQERSRREQRRSAVQRDVRSLLEELERGAPGES
Ga0150985_10417820513300012212Avena Fatua RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKG*
Ga0150985_10680842223300012212Avena Fatua RhizosphereVNWNVVQERRTWLELHWDVLEEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL*
Ga0150985_10970406323300012212Avena Fatua RhizosphereAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG*
Ga0150985_11026405723300012212Avena Fatua RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLVAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA*
Ga0150985_11133389023300012212Avena Fatua RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDSPPIA*
Ga0150985_11196726613300012212Avena Fatua RhizosphereHGGFAMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVGDMVRELGDRLMAAGAPEDDYISALDQEKSRRVQRRSAAQREVHALLEQLEQGATGDSKSDSLG*
Ga0150985_11706353913300012212Avena Fatua RhizosphereAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYISALDQERSRREQRRTAAQRDVRSLLEELERGAAGGDAKGENSSKL*
Ga0150985_12198910923300012212Avena Fatua RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQREVRNLLEELERGARGEPRGDIPPKA*
Ga0150985_12254798413300012212Avena Fatua RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDSPPKA*
Ga0137372_1003491623300012350Vadose Zone SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVEQTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA*
Ga0137372_1099956423300012350Vadose Zone SoilGPDMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDEGHPEQVWDFCCWDCTVNFGLGRRKGPVGDLVRELGDRVMAAGGQEDDYLSALDQERSRREQRRSAAQRDVRSLLEELEKGATGESMGDGSKH*
Ga0137386_1115015913300012351Vadose Zone SoilMGAFKRCDHCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAAEEDYLSALDQERARREQRRSAVQRDVRSLLEELERGAPGESKGDTSKH*
Ga0137367_1030919413300012353Vadose Zone SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCAWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELER
Ga0137371_1051925823300012356Vadose Zone SoilVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAAEEDYLSALDQERSRREQRRSAVQRDVRSLLEELERGAPGESKGDSSKH*
Ga0137368_1086678413300012358Vadose Zone SoilMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCAWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLTALDQERTRRQQRRSAAQRDVRNLLEQLEQGARGETKGD
Ga0150984_10632691213300012469Avena Fatua RhizosphereMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDDYIAALDQERSRREQRRTAAQRDVRSLLEELERGAAGGDSKGENSKL*
Ga0150984_11726408923300012469Avena Fatua RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLQLHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDSPPKA*
Ga0150984_12213871713300012469Avena Fatua RhizosphereVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA*
Ga0137373_1109979513300012532Vadose Zone SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCAWDCAVNFGLSRRKGPVSDLVRELGDRVMASGALEEDYLSALDQERSRREQRRSAVQRDVRSLLDELERGATGESKGDSAKH*
Ga0136611_1002257033300012682Polar Desert SandMGAYKRCDYCGRTVNWNDAQERRTWLELHWDVLEDGHPEQVWDFCAWDCSVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLAALDQERTRRNLRRTAAQRDVRNLLEELERGVRGESKGDGQATA*
Ga0136614_1121084613300012684Polar Desert SandMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCAWDCAVNFGLARRKGPVGDLVRELGDRLMAAGAPEDDYLSALDQERSRREQRRTAAQRDVRTLLEQLERGARGEPQGDAPPKA*
Ga0164299_1139174313300012958SoilRTANGNDIQERRTWLERHWDVLDDGHPEQVWDVCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGGEPRGDVPRGDVPPKA*
Ga0163163_1163709013300014325Switchgrass RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRSDSPPKA*
Ga0173483_1096663113300015077SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLGRRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA
Ga0132258_10014202183300015371Arabidopsis RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWECTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKG*
Ga0132257_10396470813300015373Arabidopsis RhizosphereGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKG*
Ga0183260_1073343813300017787Polar Desert SandMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCAWDCAVNFGLARRKGPVGDLVRELGDRLMAAGAPEDDYLSALDQERSRREQRKTAAQRDVRSLLEQLEQGARGESKGDAPPKA
Ga0136617_1074732013300017789Polar Desert SandMGAYKRCDYCGRTVNWNDVQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKAPVDDLVRELGDRLMAAGAPEDEYLSALEQERTRRQQRRTAAQRDVRNLLEELERGVRGETKGDGQPTA
Ga0163161_1113029613300017792Switchgrass RhizosphereSATSIIEVQKGHGGFAMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLYDGHPEQVWDFCSWDCAVNFGLARRKGPVGDMVRELGDRLMAAGAPEDDYISALDQEKSRRVQRRSAAQREVHALLEQLEQGATGDSKSDSLG
Ga0190265_1166256223300018422SoilMGAFKRCDHCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL
Ga0066667_1144019013300018433Grasslands SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLGRRKGPVGDLVREFGDRVMAAGAAEEDYLSALDQERSRREQRRSAVQRDVRTLLEELERGAPGEPKGDTSKH
Ga0190268_1102430013300018466SoilMGAYKRCDYCGRTVNWNDIQERRTWLQLHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG
Ga0190274_1262608023300018476SoilMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVGDMVRELGDRLMAAGAPEDDYISALDQEKSRRVQRRSAAQREVHALLEQL
Ga0066669_1111481013300018482Grasslands SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCAWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGALEEDYLSALDQERSRREQRRSAVQRDVRSLLDELERGAAGDSKGDSSKI
Ga0066669_1143098023300018482Grasslands SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA
Ga0206356_1191137523300020070Corn, Switchgrass And Miscanthus RhizosphereGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGQVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDSPPKA
Ga0196959_1016624313300021184SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVP
Ga0224712_1060599713300022467Corn, Switchgrass And Miscanthus RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRTGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPPKA
Ga0224712_1060733713300022467Corn, Switchgrass And Miscanthus RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEE
Ga0207646_1148437113300025922Corn, Switchgrass And Miscanthus RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG
Ga0207661_1058983723300025944Corn RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGGEPRGDVPPKA
Ga0209474_1017362423300026550SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCSWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAAEEDYLGALDQERSRREQRRSAVQRDVRSLLEELERGAPGESKGDSSKH
Ga0209814_1017537223300027873Populus RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG
Ga0209181_1009269923300027878FreshwaterMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCTWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGNEPHSDVPRGDVPPKADG
Ga0209486_1040912823300027886Agricultural SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKG
Ga0307276_1011580123300028705SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDVPPKA
Ga0307297_1008715023300028754SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDSPPKA
Ga0102757_1128362113300030785SoilAMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL
Ga0308202_112318123300030902SoilMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL
Ga0308202_116463113300030902SoilGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL
Ga0102746_1091708923300031054SoilDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL
Ga0308189_1019200513300031058SoilGGFAMGAFKRCDYCGRTVSWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCAVNFGLARRKGPVGDMVRELGDRLMAAGAPEDDYISALDQEKSRRVQRRSAAQREVHALLEQLEQGATGDSKGESLS
Ga0308189_1026893013300031058SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLGRRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRQQNAQRDVRNLLEELERGARGGEPRGDGPPKA
Ga0308201_1012939723300031091SoilSMGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL
Ga0308199_115069223300031094SoilGAFKRCDYCGRTVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLSRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERSRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL
Ga0170824_12613145123300031231Forest SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFRSWDCAVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRN
Ga0308194_1029917413300031421SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDIPPKG
Ga0272434_128203913300031473RockMGAYKRCDYCGRTVNWNDAQERRTWLELHWDVLEDGHPEQVWDFCAWDCSVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLAALDQERTRRNLRRTAAQRDVRNLLEELERGVRGESKGDGQATA
Ga0307408_10189913713300031548RhizosphereMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGEPRGDIPPKA
Ga0308176_1271306913300031996SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEVERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDTPPKA
Ga0310890_1083004613300032075SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGEPRGDVPRGDV
Ga0314780_065457_172_5643300034659SoilMGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERSRRHQRRQNAQRDVRNLLEELERGARGGGEPRGDVPPKA
Ga0314786_189387_2_4063300034664SoilGAYKRCDYCGRTVNWNDIQERRTWLELHWDVLDDGHPEQVWDFCSWDCTVNFGLARRKGPVDDLVRELGDRLMAAGAPEDDYLSALEIERTRRHQRRQNAQRDVRNLLEELERGARGGGEPRGDVPRGDVPPKS
Ga0314793_113036_195_5393300034668SoilVNWNDVQERRTWLELHWDVLDEGHPEQVWDFCCWDCAVNFGLGRRKGPVGDLVRELGDRVMAAGAVEDEYLSALDQERTRREQRRSAAQRDVRSLLEELERGATGDAKGESGKL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.