Metagenome Family F075825

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075825
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	86 residues
Representative Sequence	MSDITPELVAEELKHQLLPVPLAARPILLEAIANLISKHVAAERTRCRALCEQRAELWRNTEGGKSPLAQEARFRANEAVYIADLLH
Number of Associated Samples	94
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.03 %
% of genes near scaffold ends (potentially truncated)	33.05 %
% of genes from short scaffolds (< 2000 bps)	75.42 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.441 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.407 % of family members)
Environment Ontology (ENVO)	Unclassified (38.983 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.627 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.91% β-sheet: 0.00% Coil/Unstructured: 46.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF07883	Cupin_2	32.20
PF00413	Peptidase_M10	11.02
PF00194	Carb_anhydrase	4.24
PF00583	Acetyltransf_1	3.39
PF03705	CheR_N	2.54
PF04828	GFA	2.54
PF04273	BLH_phosphatase	1.69
PF02798	GST_N	1.69
PF04116	FA_hydroxylase	1.69
PF00733	Asn_synthase	1.69
PF02517	Rce1-like	0.85
PF07638	Sigma70_ECF	0.85
PF13649	Methyltransf_25	0.85
PF00690	Cation_ATPase_N	0.85
PF02667	SCFA_trans	0.85
PF12840	HTH_20	0.85
PF08241	Methyltransf_11	0.85
PF02518	HATPase_c	0.85
PF05569	Peptidase_M56	0.85
PF08530	PepX_C	0.85
PF12833	HTH_18	0.85
PF07589	PEP-CTERM	0.85
PF03460	NIR_SIR_ferr	0.85
PF02129	Peptidase_S15	0.85
PF10082	BBP2_2	0.85
PF07045	DUF1330	0.85
PF00676	E1_dh	0.85
PF04341	DUF485	0.85
PF01738	DLH	0.85
PF05721	PhyH	0.85
PF09423	PhoD	0.85
PF09982	DUF2219	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG5549	Predicted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	11.02
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	5.08
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	4.24
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.54
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	1.69
COG3453	Predicted phosphohydrolase, protein tyrosine phosphatase (PTP) superfamily, DUF442 family	General function prediction only [R]	1.69
COG2031	Short chain fatty acids transporter	Lipid transport and metabolism [I]	0.85
COG2936	Predicted acyl esterase	General function prediction only [R]	0.85
COG2978	p-Aminobenzoyl-glutamate transporter AbgT	Coenzyme transport and metabolism [H]	0.85
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.85
COG3162	Uncharacterized membrane protein, DUF485 family	Function unknown [S]	0.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.85
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.85
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.85
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.85
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.44 %
Unclassified	root	N/A	13.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.44 %
Unclassified	root	N/A	13.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.44 %
Unclassified	root	N/A	13.56 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.90 %
Unclassified	root	N/A	13.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.39 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.24 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.54 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.69 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Maricaulales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.24 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.54 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.69 %
Maricaulaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae	0.85 %
Chloroflexi bacterium RBG_16_51_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_51_9	0.85 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.85 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.85 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.24 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.69 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	0.85 %
Permianibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Permianibacter	0.85 %
Maricaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis	0.85 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.85 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.85 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.85 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.85 %
Chloroflexi bacterium RBG_16_51_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_51_9	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.24 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.69 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	0.85 %
Lysobacter segetis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter segetis	0.85 %
Permianibacter fluminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Permianibacter → Permianibacter fluminis	0.85 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.85 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.85 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.85 %
Maricaulis maris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → Maricaulis maris	0.85 %
Chloroflexi bacterium RBG_16_51_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_51_9	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.24 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.69 %
Flagellimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flagellimonas	0.85 %
Maricaulis maris MCS10	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → Maricaulis maris → Maricaulis maris MCS10	0.85 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.85 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	0.85 %
Lysobacter segetis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter segetis	0.85 %
Permianibacter fluminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Permianibacter → Permianibacter fluminis	0.85 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.85 %
Chloroflexi bacterium RBG_16_51_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_51_9	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.24 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.69 %
Flagellimonas hymeniacidonis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flagellimonas → Flagellimonas hymeniacidonis	0.85 %
Maricaulis maris MCS10	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → Maricaulis maris → Maricaulis maris MCS10	0.85 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.85 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	0.85 %
Lysobacter segetis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter segetis	0.85 %
Permianibacter fluminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Permianibacter → Permianibacter fluminis	0.85 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.85 %
Chloroflexi bacterium RBG_16_51_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_51_9	0.85 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8703293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6697	Open in IMG/M
2162886012\|MBSR1b_contig_10498144	All Organisms → cellular organisms → Bacteria → Proteobacteria	2314	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0541835	Not Available	618	Open in IMG/M
3300000890\|JGI11643J12802_10014522	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300003267\|soilL1_10005081	All Organisms → cellular organisms → Bacteria → Proteobacteria	7455	Open in IMG/M
3300003267\|soilL1_10201229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1127	Open in IMG/M
3300004114\|Ga0062593_100093005	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300004156\|Ga0062589_100034252	All Organisms → cellular organisms → Bacteria	2637	Open in IMG/M
3300004156\|Ga0062589_100055299	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300004156\|Ga0062589_102842034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	505	Open in IMG/M
3300004157\|Ga0062590_100026449	All Organisms → cellular organisms → Bacteria → Proteobacteria	2850	Open in IMG/M
3300005093\|Ga0062594_100154001	All Organisms → cellular organisms → Bacteria → Proteobacteria	1512	Open in IMG/M
3300005093\|Ga0062594_101631001	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005328\|Ga0070676_10126098	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300005330\|Ga0070690_100460065	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005332\|Ga0066388_104780428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300005345\|Ga0070692_10226078	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005353\|Ga0070669_100007985	All Organisms → cellular organisms → Bacteria → Proteobacteria	7559	Open in IMG/M
3300005441\|Ga0070700_100105678	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300005455\|Ga0070663_100221016	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300005471\|Ga0070698_100471898	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005578\|Ga0068854_100055866	All Organisms → cellular organisms → Bacteria	2844	Open in IMG/M
3300005618\|Ga0068864_102721825	Not Available	500	Open in IMG/M
3300005840\|Ga0068870_10332351	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005842\|Ga0068858_102032035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_51_9	568	Open in IMG/M
3300006844\|Ga0075428_100041085	All Organisms → cellular organisms → Bacteria → Proteobacteria	5087	Open in IMG/M
3300006844\|Ga0075428_100101379	All Organisms → cellular organisms → Bacteria	3138	Open in IMG/M
3300006844\|Ga0075428_100388120	All Organisms → cellular organisms → Bacteria → Proteobacteria	1497	Open in IMG/M
3300006845\|Ga0075421_100114666	All Organisms → cellular organisms → Bacteria → Proteobacteria	3385	Open in IMG/M
3300006853\|Ga0075420_100182025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1838	Open in IMG/M
3300006854\|Ga0075425_101465468	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006871\|Ga0075434_100336903	All Organisms → cellular organisms → Bacteria → Proteobacteria	1529	Open in IMG/M
3300006876\|Ga0079217_10253129	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300006881\|Ga0068865_100340421	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300006894\|Ga0079215_10741766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300006904\|Ga0075424_100389681	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300006918\|Ga0079216_10316352	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300006969\|Ga0075419_10878691	Not Available	646	Open in IMG/M
3300009092\|Ga0105250_10117592	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300009147\|Ga0114129_10483347	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300009162\|Ga0075423_10240053	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300009174\|Ga0105241_11719889	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300009553\|Ga0105249_12249518	Not Available	618	Open in IMG/M
3300010362\|Ga0126377_10158349	All Organisms → cellular organisms → Bacteria → Proteobacteria	2134	Open in IMG/M
3300010371\|Ga0134125_11380437	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010401\|Ga0134121_10013881	All Organisms → cellular organisms → Bacteria → Proteobacteria	6402	Open in IMG/M
3300010403\|Ga0134123_10003665	All Organisms → cellular organisms → Bacteria → Proteobacteria	10006	Open in IMG/M
3300010403\|Ga0134123_11253639	Not Available	774	Open in IMG/M
3300011119\|Ga0105246_11294487	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012940\|Ga0164243_10001030	All Organisms → cellular organisms → Bacteria → Proteobacteria	48405	Open in IMG/M
3300013306\|Ga0163162_10059939	All Organisms → cellular organisms → Bacteria	3839	Open in IMG/M
3300013306\|Ga0163162_10140774	All Organisms → cellular organisms → Bacteria → Proteobacteria	2526	Open in IMG/M
3300014326\|Ga0157380_10006051	All Organisms → cellular organisms → Bacteria	8479	Open in IMG/M
3300015371\|Ga0132258_10151111	All Organisms → cellular organisms → Bacteria → Proteobacteria	5569	Open in IMG/M
3300015372\|Ga0132256_102264623	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300015374\|Ga0132255_105087338	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300017792\|Ga0163161_10572934	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300018422\|Ga0190265_10323101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Maricaulis → Maricaulis maris → Maricaulis maris MCS10	1621	Open in IMG/M
3300018422\|Ga0190265_11544170	Not Available	777	Open in IMG/M
3300018422\|Ga0190265_11675739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	746	Open in IMG/M
3300018422\|Ga0190265_11938251	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300018429\|Ga0190272_12452646	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300018429\|Ga0190272_12719495	Not Available	544	Open in IMG/M
3300018465\|Ga0190269_10505149	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	787	Open in IMG/M
3300018465\|Ga0190269_10577854	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300018476\|Ga0190274_10652178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1089	Open in IMG/M
3300018476\|Ga0190274_10965695	Not Available	924	Open in IMG/M
3300018481\|Ga0190271_12942962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	572	Open in IMG/M
3300019356\|Ga0173481_10256617	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300019377\|Ga0190264_10170124	All Organisms → cellular organisms → Bacteria → Proteobacteria	1155	Open in IMG/M
3300019377\|Ga0190264_10696407	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300019377\|Ga0190264_11280382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	617	Open in IMG/M
3300019377\|Ga0190264_11994234	Not Available	532	Open in IMG/M
3300025893\|Ga0207682_10500003	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025903\|Ga0207680_10719613	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300025907\|Ga0207645_10108965	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300025908\|Ga0207643_10021357	All Organisms → cellular organisms → Bacteria	3555	Open in IMG/M
3300025923\|Ga0207681_10011641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5407	Open in IMG/M
3300025935\|Ga0207709_10178433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Permianibacter → Permianibacter fluminis	1497	Open in IMG/M
3300025937\|Ga0207669_10294103	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300025941\|Ga0207711_10339042	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300025961\|Ga0207712_10497949	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300025972\|Ga0207668_10128894	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300026023\|Ga0207677_10048628	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300026067\|Ga0207678_10235198	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300026116\|Ga0207674_10051486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4202	Open in IMG/M
3300026142\|Ga0207698_11708470	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300027880\|Ga0209481_10603358	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300027907\|Ga0207428_10138521	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300027909\|Ga0209382_10020724	All Organisms → cellular organisms → Bacteria → Proteobacteria	7988	Open in IMG/M
3300027909\|Ga0209382_11171826	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	788	Open in IMG/M
3300028592\|Ga0247822_11353354	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031228\|Ga0299914_10417279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1169	Open in IMG/M
3300031229\|Ga0299913_10101438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2811	Open in IMG/M
3300031229\|Ga0299913_10526297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1168	Open in IMG/M
3300031229\|Ga0299913_11780127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	565	Open in IMG/M
3300031456\|Ga0307513_10069293	All Organisms → cellular organisms → Bacteria → Proteobacteria	3691	Open in IMG/M
3300031456\|Ga0307513_10727382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300031538\|Ga0310888_10283833	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031538\|Ga0310888_10481999	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031548\|Ga0307408_100117782	All Organisms → cellular organisms → Bacteria → Proteobacteria	2052	Open in IMG/M
3300031548\|Ga0307408_100660588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter segetis	936	Open in IMG/M
3300031548\|Ga0307408_101914198	Not Available	569	Open in IMG/M
3300031824\|Ga0307413_11294484	Not Available	637	Open in IMG/M
3300031852\|Ga0307410_11198402	Not Available	661	Open in IMG/M
3300031901\|Ga0307406_10176343	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flagellimonas → Flagellimonas hymeniacidonis	1552	Open in IMG/M
3300031903\|Ga0307407_11475939	Not Available	537	Open in IMG/M
3300031908\|Ga0310900_10326022	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
3300031911\|Ga0307412_11972475	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031995\|Ga0307409_100197250	Not Available	1798	Open in IMG/M
3300032003\|Ga0310897_10104560	All Organisms → cellular organisms → Bacteria → Proteobacteria	1131	Open in IMG/M
3300032004\|Ga0307414_11394653	Not Available	651	Open in IMG/M
3300032005\|Ga0307411_10418925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1112	Open in IMG/M
3300032012\|Ga0310902_10917204	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300032013\|Ga0310906_10922107	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300032017\|Ga0310899_10427427	Not Available	639	Open in IMG/M
3300032126\|Ga0307415_100404692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1166	Open in IMG/M
3300032421\|Ga0310812_10095923	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.39%
Environmental	Environmental	46.61%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.39%
Terrestrial	Environmental → Terrestrial	46.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.71%
Roots	Host-Associated → Plants → Roots	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.32%
Loam	Environmental → Terrestrial → Soil → Loam	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.54%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012940	Organic Plus compost microbial communities from Emeryville, California, USA - Original compost - Organic plus compost (OP)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02680850	2088090015	Soil	MSDITPELVAEELKHQLLPVPSAARPILLEAIANLISHHVAAERMRCRALCEQRAELWRNTEGGATPLAQEARSRANEATYIADLLH
MBSR1b_0337.00005590	2162886012	Miscanthus Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
ICChiseqgaiiDRAFT_05418352	3300000033	Soil	MSDITPELVADELKHQLLPVPLAARPILLEAIANLIAKQVNAERTRCRALCEQRAELWRNTDGGKSPLAQEARFRANEATYLADLLH*
JGI11643J12802_100145222	3300000890	Soil	MSDITPELVAEELKHQLLPVPSAARPILLEAIANLISHHVAAERMRCRALCEQRAELWRNTEGGATPLAQEARSRANEATYIADLLH*
soilL1_100050814	3300003267	Sugarcane Root And Bulk Soil	MSDITPEIVADELKHQLLPVPLAARPILLEAIANLISKQVAAERTRCRELCEQRAELWRNTEGGRTPLAQEARFRANEAIYIADLLH*
soilL1_102012292	3300003267	Sugarcane Root And Bulk Soil	MSDITAEQVAAELQHQLMPVAPAAQPILLEAITNLIARQVAAERTRCRMLCEQRAQLWRNTERGSSPLAREARFRANEAAYLADLLH*
Ga0062593_1000930053	3300004114	Soil	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0062589_1000342524	3300004156	Soil	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0062589_1000552992	3300004156	Soil	MSDITPEFVADALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0062589_1028420341	3300004156	Soil	MSDITAELVAEELKHQMLPVPLAARPILLEAIANLIAKQVAAERTRCRAVCEQRAELWRNTEGGASPLAQEARSRANEAIYIADLLH*
Ga0062590_1000264494	3300004157	Soil	MSDITPEFVANALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0062594_1001540012	3300005093	Soil	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLIAKHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0062594_1016310011	3300005093	Soil	HQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0070676_101260981	3300005328	Miscanthus Rhizosphere	LMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0070690_1004600652	3300005330	Switchgrass Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLIANHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0066388_1047804281	3300005332	Tropical Forest Soil	MSDITPELVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERTRCRELCEQRAELWRSTESGKTPLAQEARFRANEAIYLADLLH*
Ga0070692_102260781	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYL
Ga0070669_1000079855	3300005353	Switchgrass Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLIAKQVAAERTRCRELCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0070700_1001056784	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	QLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0070663_1002210163	3300005455	Corn Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLTDLLH*
Ga0070698_1004718982	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSDITAELVAEELKHQMLPVPLAARPILLEAIANLIAKQVAAERTRCRAVCEQRADLWRNTEGGASPLAQEARSRANEAIYIADLLH*
Ga0068854_1000558661	3300005578	Corn Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARF
Ga0068864_1027218252	3300005618	Switchgrass Rhizosphere	DELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0068870_103323511	3300005840	Miscanthus Rhizosphere	SDITPEFVADALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0068858_1020320352	3300005842	Switchgrass Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLIAQHVAAERTRCRELCEQRAELWRHTEGGQTPLAQ
Ga0075428_1000410857	3300006844	Populus Rhizosphere	MSEITPELVADELKHQMLPVPLAARPILLEAIANLIAKHVDAERTRCRSLCEQRAELWRNTESGKTPLAQEARFRANEAIYIADLLH*
Ga0075428_1001013793	3300006844	Populus Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLIVKQVAAERTRCRELCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0075428_1003881203	3300006844	Populus Rhizosphere	MSDITPEFVADELKHQLLPVPLAARPILLEAIANLIAKQVAAERTRCRALCEQRAELWRNTEGGKSPLAQEARCRANEATYIADLLH*
Ga0075421_1001146663	3300006845	Populus Rhizosphere	MSDITPEFVADELKHQLLPVPLAARPILLEAIANLIAKQVAAERTRCRALCEQRAELWRNTESGKSPLAQEARCRANEATYIADLLH*
Ga0075420_1001820253	3300006853	Populus Rhizosphere	MSDITPELVADELKYQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTNGGTSPLAQEARSRANEATYIADLLH*
Ga0075425_1014654681	3300006854	Populus Rhizosphere	TPEFVANALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0075434_1003369031	3300006871	Populus Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAVANLIAKHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0079217_102531291	3300006876	Agricultural Soil	MTDITPELVAEELKHQLLPVPLAARPILLEAIANLISKQVAAERTRCRTLCEQRAELWRNTQGGKSPLAQEARFRANEAVYIADLLH*
Ga0068865_1003404213	3300006881	Miscanthus Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQE
Ga0079215_107417661	3300006894	Agricultural Soil	PELVADELKLQLLPVPLAARPILLEAIANLMAKHVAAERTRCRALCEQRAELWRNTEGGKSPLAQEARSRANEAIYIADLLH*
Ga0075424_1003896811	3300006904	Populus Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAVANLIAQHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0079216_103163522	3300006918	Agricultural Soil	MSDITPELVADELKHQLLPVPLAARPILLEAIADLIAKRVAAERTRCRALCEQRAELWRNTEGGKSPLAQEARFRANEAIYLADLLH*
Ga0075419_108786912	3300006969	Populus Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRELCEPRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0105250_101175921	3300009092	Switchgrass Rhizosphere	ALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0114129_104833472	3300009147	Populus Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRELCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0075423_102400533	3300009162	Populus Rhizosphere	MQDPFLRYAMSDITPEFVADALKHQLLPVPLAAWPILLEAVANLIAQHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0105241_117198891	3300009174	Corn Rhizosphere	VVQCRKYAMSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0105249_122495181	3300009553	Switchgrass Rhizosphere	MQDPFLRYAMSDITPEFVADALKHQLLPVPLAARPILLEAIANLIAQHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0126377_101583492	3300010362	Tropical Forest Soil	MSDITPELVADELKNQLMPVPLAARPILLEAIANLVSKQVAAERTRCRSLCEQRAELWQNAEGSKSPLAQEARFRANEAIYIADLLH*
Ga0134125_113804372	3300010371	Terrestrial Soil	MQDPFLRYAMSDITPEFVADALKHQLLPVPLAARPILLEAVANLIAKHVAAERTRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0134121_100138814	3300010401	Terrestrial Soil	MSDITPEFVADALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAHEARFRANEAIYLADLLH*
Ga0134123_100036651	3300010403	Terrestrial Soil	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLIAKQVAAERTRCRELGEQRAELWRNTEGAQRPLAQEARSRANEAIYIADLLH*
Ga0134123_112536392	3300010403	Terrestrial Soil	MQDPFLRYAMSDITPEFVADALKHQLLPVPLAARPILLEAVANLIAQHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0105246_112944872	3300011119	Miscanthus Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCDQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0164243_1000103036	3300012940	Compost	MSDITPELISDALKRQLLPVPLEARPMLVEAIAGLISKRVSEERARCRAVCEQRAELWRNTQADGGPLAQEARARANEATYIADLLH*
Ga0163162_100599395	3300013306	Switchgrass Rhizosphere	MSDITPEYVANALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0163162_101407745	3300013306	Switchgrass Rhizosphere	IVADELQHQLMPVPLAARPILLEAIANLIAKQVAAERTRCRELCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH*
Ga0157380_100060514	3300014326	Switchgrass Rhizosphere	MSDITPELIADELKHQLMPVPLAIRPILLEAIANLVTKQVAAERTRCRALCEQRAELWRNTNGGTRPLAQEARSRANEATYIADLLD*
Ga0132258_101511112	3300015371	Arabidopsis Rhizosphere	MQDPFLRYAMSDITPEFVADALKHQLLPVPLAARPILLEAVANLIAKHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0132256_1022646231	3300015372	Arabidopsis Rhizosphere	ETVNFTAPHMQDPFLRYAMSDITPEFVANALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH*
Ga0132255_1050873382	3300015374	Arabidopsis Rhizosphere	KHQLLPVPLAARPILLEAVANLIAKHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH*
Ga0163161_105729343	3300017792	Switchgrass Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLIPKQVAAERTRRRELCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0190265_103231013	3300018422	Soil	MSDITPELVAEELKHQLLPVPLAARPILLEAIANLISKHVAAERTRCRALCEQRAELWRNTEGGKSPLAQEARFRANEAVYIADLLH
Ga0190265_115441701	3300018422	Soil	MSDITPDVVADELKHQLMPVPLALRPILIEAITNLVSKHVAAERARCRTLCEQRADLWRNTQGGSSPLGQEARFRANEAIYIADLLH
Ga0190265_116757392	3300018422	Soil	MSDIAPELVAEELKHQLLPVPLAARPILLEAVANLISKHVAAERTRCRTLCEQRAELWRNTEGGKSPLAQEARFRANEAVYIADLLH
Ga0190265_119382511	3300018422	Soil	MSDMTPERVADELKHQLMPVPLAIRPILLEAIANLISKHVAAERTRCRALCEQRVELWRNTKGGTSPLVQEARSRANEATYIADLLH
Ga0190272_124526461	3300018429	Soil	MSDITPELVAEELKHQLLPVPLAARPILLEAIANLISKRVAAERTRCRTLCEQRAELWRTTEGGKSPLAQ
Ga0190272_127194951	3300018429	Soil	MSEITAELVADALRHQMMPVPLAARPILLEAITNLIAKHVAAERTRCRALCEQRAELWRNTNGGASPLAQEARSRANEATYIADLLN
Ga0190269_105051492	3300018465	Soil	MSVITPELVADELKHQLLPVPLAARPILLEAIVSLLSKHVAAERARCRAFCEQRAELWRNTEGGKSPLAQEARFRANEATYIADLLH
Ga0190269_105778541	3300018465	Soil	MSDITPELVADELKHQLMPIPLEARPILLEAITNLISKHLAAERHRCRALCEQRAELWRNTQGGSSPLAQEARFRANEATYIADLLD
Ga0190274_106521782	3300018476	Soil	MSDITAELVAEELKHQMLPVPLAARPILLEAIANLIAKQVAAERTRCRAVCEQRAELWRNTEGGASPLAQEARSRANEAIYIADLLH
Ga0190274_109656952	3300018476	Soil	MADITPELVAEELKHQLLPVPLAARPILLEAIANLVSKQVAAERDRCRALVEQRAELWRNTESGTSPLANEARFRANEAIYIADLLH
Ga0190271_129429621	3300018481	Soil	MSEITLDVVADALKHQLMPVPLAARPILLEAITNLISIHVAAERTRCRAVCEQRAELWRNTNGGASPLAQEARSRANEATYIADLLH
Ga0173481_102566172	3300019356	Soil	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0190264_101701242	3300019377	Soil	MSDLTPELVADELKHQLLPVPLAARPILLEAITNLISKHIDAERTRCRALCEQRAELWRNTEGGKTPLAQEARCRANEATYLADLLN
Ga0190264_106964071	3300019377	Soil	MSDITAELVAEELKHQLLPVPLAARPILLEAIANLISKHVAAERTRCRALCEQRAELWRNTEGGKSPLAQEARVRANEAVYI
Ga0190264_112803822	3300019377	Soil	SPELVADELKHQLLPVPLAARPILLEAIANLMSKHVAAERTRCRALCEQRAELWRNTEGGKSPLAQEARFRANEAVYIADLLH
Ga0190264_119942342	3300019377	Soil	MSDITPELVAEELKHQLLPVPLAARPILLEAIANLISKHVAAERTRCRALCEQRAALWRNTEGGKSPLRQEARFRANEAIYLADLLH
Ga0207682_105000032	3300025893	Miscanthus Rhizosphere	ELDREFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0207680_107196132	3300025903	Switchgrass Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPLLLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0207645_101089652	3300025907	Miscanthus Rhizosphere	MSDITPEFVANALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0207643_100213575	3300025908	Miscanthus Rhizosphere	RLPVQVRLGEVKLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0207681_100116416	3300025923	Switchgrass Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLIAKQVAAERTRCRELCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0207709_101784331	3300025935	Miscanthus Rhizosphere	HQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0207669_102941032	3300025937	Miscanthus Rhizosphere	MSDITPEFVADALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0207711_103390421	3300025941	Switchgrass Rhizosphere	RPGGFRSSETVNFTAPHMQDPFLRYAMSDITPEFVADALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0207712_104979492	3300025961	Switchgrass Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLIAQHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH
Ga0207668_101288944	3300025972	Switchgrass Rhizosphere	FVANALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0207677_100486284	3300026023	Miscanthus Rhizosphere	MSDITPEFVANALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH
Ga0207678_102351983	3300026067	Corn Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLL
Ga0207674_100514867	3300026116	Corn Rhizosphere	QLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0207698_117084701	3300026142	Corn Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARS
Ga0209481_106033582	3300027880	Populus Rhizosphere	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRELCEPRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0207428_101385212	3300027907	Populus Rhizosphere	MSDITPEFVADALKHQLLPVPLAARPILLEAVANLIAKHVAAERTRCRELCEQRAELWRHTEGGQTPLAQEARFRANEAIYLADLLH
Ga0209382_100207243	3300027909	Populus Rhizosphere	MSEITPELVADELKHQMLPVPLAARPILLEAIANLIAKHVDAERTRCRSLCEQRAELWRNTESGKTPLAQEARFRANEAIYIADLLH
Ga0209382_111718261	3300027909	Populus Rhizosphere	MSDITPEFVADELKHQLLPVPLAARPILLEAIANLIAKQVAAERTRCRALCEQRAELWRNTESGKSPLAQEARCRANEATYIADLLH
Ga0247822_113533541	3300028592	Soil	ELQHQLMPVPLAARPILLEAIANLIAKQVAAERTRCRELCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0299914_104172792	3300031228	Soil	MSDITPELVADELKHQLMPVPLAIRPILLEAIANLIAKHVIAERTRCRALCEQRAELWGNTKGGTTPLAQEARSRANEATYIADLLH
Ga0299913_101014383	3300031229	Soil	MSDITPELVADELKHQLMPVPLTARPILLEAITNLISEHVAAERARCRALCEQRAELWRNTEGGTSPLAQEARFRANEAIYIADLLH
Ga0299913_105262972	3300031229	Soil	MSDITPELVAEELKHQLLPVPLAARPILLEAIATLISKHVAAERTRCRALCEQRAQLWRNTEGGKSPLAQEARFRANEAVYIADLLH
Ga0299913_117801272	3300031229	Soil	MSDITPELVADELKHQLMPVPLAIRPILLEAIANLIAKHVIAERTRCRALCEQRAELWGNTKGGTSALAQEARSRANEATYIADLLH
Ga0307513_100692932	3300031456	Ectomycorrhiza	MLRANSFLRTQIPSSNYGSCTLSDITSKLVADELKHQLMAVSQAIQPILLEAITNLISKHVAAERIRCRALCEQRAELWRNTRGGTSPLAEEARSRANEAIYIRDLLH
Ga0307513_107273821	3300031456	Ectomycorrhiza	MADITAELVADELKHQLMPVPLAARPILLEAITNLISKHVAAERTRCRALCEQRAELWRNTEGGTSPLAQEARFRANEATYIADLLL
Ga0310888_102838332	3300031538	Soil	MSDITPEIVADELQHQLMPVPMAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGGQSPLAQEARSRANEAIYIADLLH
Ga0310888_104819991	3300031538	Soil	FRSSETVNFTAPHMQDPFLRYAMSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0307408_1001177821	3300031548	Rhizosphere	DMSDITPELVAEELKSQLLPVPLAARPILLEAIANLISKHVAAERTRCRALCEQRAQLWRNTQGGKSPLAQEARFRANEAIYLADLLH
Ga0307408_1006605882	3300031548	Rhizosphere	MSDITPDRVADELKHPLMPVPLEARPILLEAITNLISRHVAAERTRCRVLCEQRAELWQKTEGATGPLAQEARARANEATYIADLLSDD
Ga0307408_1019141982	3300031548	Rhizosphere	MPDITPEIVADELQHQLMPVPLAARPILLEAIANLISQHVAAERTRCRELCEQRAELWRNTERGQSSLAQEARSRANEAIYIADLMH
Ga0307413_112944842	3300031824	Rhizosphere	MSNITPDRVADELKHQLMPVPLEARPILLEAITNLISRHVAAERARCRVLCEQRAVLWQKTEGGTGPLAQEARARANEATYIADLLSDD
Ga0307410_111984022	3300031852	Rhizosphere	MSNITPDRVADELKHQLMPVPLEARPILLEAITNLISIHVAAERARCRVLCEQRAVLWQKTEGGTGPLAQEARARANEATYIADLLSDD
Ga0307406_101763433	3300031901	Rhizosphere	MSDITPELVAEELKSQLLPVPLAARPILLEAIANLISKHVAAERTRCRALCEQRAQLWRNTQGGKSPLAQEARFRANEAIYLADLLH
Ga0307407_114759391	3300031903	Rhizosphere	MSNITPDRVADELKHQLMPVPLEARPILLEAITNLISRHVAAERTRCRVLCEQRAVLWQKTEGGTGPLAQEARARANEATYIADLLSDD
Ga0310900_103260222	3300031908	Soil	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLIAKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0307412_119724751	3300031911	Rhizosphere	MSDITPELVAEELKSQLVPVPLAARPILLEAIANLISKHVAAERTRCRALCEQRAQLWRNTEGGKSPLAQEARFRANEAICLADLLH
Ga0307409_1001972501	3300031995	Rhizosphere	MSNITPDRVADELKHQLMPVPLEARPILLEAITNLISKRVAAERARCRVLCEQRAVLWQKTEGGTGPLAQEARARANEATYIADLLSDD
Ga0310897_101045602	3300032003	Soil	MSDITPEIVADELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGGQSPLAQEARSRANEAIYIADLLH
Ga0307414_113946531	3300032004	Rhizosphere	MSNITPDRVADELKHQLMPVPLEARPILLEAITNLISRHVAAERARCRVLCEQRAVLWQKTEGGTGPLAQ
Ga0307411_104189251	3300032005	Rhizosphere	MSNITPDRVADELKHQLMPVPLEARPILLEAITNLISRHVAAERARCRVLCEQRAVLWQKTEGRTGPLAQEARARANEA
Ga0310902_109172042	3300032012	Soil	ELQHQLMPVPLAARPILLEAIANLISKQVAAERTRCRALCEQRAELWRNTEGAQSPLAQEARSRANEAIYIADLLH
Ga0310906_109221072	3300032013	Soil	MSDITPEFVANALEHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQ
Ga0310899_104274271	3300032017	Soil	HCTQWQASGGFRSSETVNFTAPHMQDPFLRYAMSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH
Ga0307415_1004046921	3300032126	Rhizosphere	PTREYGMSDITPELVAEELKSQLLPVPLAARPILLEAIANLISKHVAAERTRCRALCEQRAQLWRNTEGGKSPLAQEARFRANEAICLADLLH
Ga0310812_100959231	3300032421	Soil	ENFRHCTQWQASGGFRSSETVNFTAPHMQDPFLRYAMSDITPEFVADALKHQLLPVPLAARPILLEAIANLVSKHVAAERSRCRELCEQRAELWRNTESGKSPLAQEARFRANEAIYLADLLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075825

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences