NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F075816

Metagenome Family F075816

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075816
Family Type Metagenome
Number of Sequences 118
Average Sequence Length 115 residues
Representative Sequence MSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSPWIVAECHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRTPGSDIG
Number of Associated Samples 79
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.42 %
% of genes near scaffold ends (potentially truncated) 29.66 %
% of genes from short scaffolds (< 2000 bps) 72.88 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (71.186 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(28.814 % of family members)
Environment Ontology (ENVO) Unclassified
(48.305 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.932 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.45%    β-sheet: 0.00%    Coil/Unstructured: 41.55%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.80
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.3.1.2: FAD-linked reductases, N-terminal domaind2dw4a22dw40.55398
d.92.1.12: Fungal zinc peptidased1eb6a_1eb60.54583
a.60.9.1: lambda integrase-like, N-terminal domaind1a0pa11a0p0.54493
a.211.1.0: automated matchesd1zkla_1zkl0.54161
f.58.1.1: MetI-liked2onkc12onk0.5381


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF01381HTH_3 22.03
PF01903CbiX 18.64
PF13560HTH_31 5.93
PF13875DUF4202 5.08
PF12844HTH_19 2.54
PF08299Bac_DnaA_C 0.85
PF03466LysR_substrate 0.85
PF13578Methyltransf_24 0.85
PF14430Imm1 0.85
PF02239Cytochrom_D1 0.85
PF02586SRAP 0.85
PF02913FAD-oxidase_C 0.85
PF00293NUDIX 0.85
PF00149Metallophos 0.85
PF13442Cytochrome_CBB3 0.85
PF03481Sua5_C 0.85
PF13676TIR_2 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.85
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 0.85
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 0.85


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms71.19 %
UnclassifiedrootN/A28.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120823349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1699Open in IMG/M
3300004268|Ga0066398_10106161All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales658Open in IMG/M
3300004633|Ga0066395_10401950Not Available772Open in IMG/M
3300004779|Ga0062380_10028685All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300004780|Ga0062378_10002651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2529Open in IMG/M
3300005180|Ga0066685_10368754All Organisms → cellular organisms → Bacteria → Proteobacteria997Open in IMG/M
3300005186|Ga0066676_10420251All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales903Open in IMG/M
3300005332|Ga0066388_100004963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9157Open in IMG/M
3300005332|Ga0066388_100010601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7180Open in IMG/M
3300005332|Ga0066388_100088072All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3514Open in IMG/M
3300005332|Ga0066388_100153056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2887Open in IMG/M
3300005332|Ga0066388_100205775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2591Open in IMG/M
3300005332|Ga0066388_100288647All Organisms → cellular organisms → Bacteria2284Open in IMG/M
3300005332|Ga0066388_100578016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1749Open in IMG/M
3300005332|Ga0066388_100609797All Organisms → cellular organisms → Bacteria → Proteobacteria1713Open in IMG/M
3300005332|Ga0066388_100732848All Organisms → cellular organisms → Bacteria → Proteobacteria1591Open in IMG/M
3300005332|Ga0066388_103402167All Organisms → cellular organisms → Bacteria → Proteobacteria813Open in IMG/M
3300005332|Ga0066388_105002925All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis alaskensis673Open in IMG/M
3300005446|Ga0066686_10305040All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1082Open in IMG/M
3300005447|Ga0066689_10312134All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales977Open in IMG/M
3300005540|Ga0066697_10084247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1838Open in IMG/M
3300005558|Ga0066698_10166053All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1498Open in IMG/M
3300005713|Ga0066905_100127213All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1791Open in IMG/M
3300005713|Ga0066905_100134009All Organisms → cellular organisms → Bacteria → Proteobacteria1755Open in IMG/M
3300005764|Ga0066903_100218002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2887Open in IMG/M
3300005764|Ga0066903_100590600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1921Open in IMG/M
3300005764|Ga0066903_100718014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1766Open in IMG/M
3300005833|Ga0074472_10660610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales10795Open in IMG/M
3300005833|Ga0074472_11233051Not Available547Open in IMG/M
3300005841|Ga0068863_101285017All Organisms → cellular organisms → Bacteria → Proteobacteria738Open in IMG/M
3300005937|Ga0081455_10022567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5879Open in IMG/M
3300006034|Ga0066656_10474559All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales815Open in IMG/M
3300006844|Ga0075428_100811605Not Available994Open in IMG/M
3300006852|Ga0075433_10072489All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3028Open in IMG/M
3300006854|Ga0075425_100128456All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2896Open in IMG/M
3300006904|Ga0075424_101112248All Organisms → cellular organisms → Bacteria → Proteobacteria842Open in IMG/M
3300006954|Ga0079219_12220248Not Available529Open in IMG/M
3300007788|Ga0099795_10028817All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium1892Open in IMG/M
3300009094|Ga0111539_10378551All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1648Open in IMG/M
3300009137|Ga0066709_104638378Not Available503Open in IMG/M
3300009147|Ga0114129_11391664Not Available866Open in IMG/M
3300009147|Ga0114129_12680176Not Available594Open in IMG/M
3300009162|Ga0075423_10117709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2785Open in IMG/M
3300009792|Ga0126374_10849365All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae702Open in IMG/M
3300009792|Ga0126374_11858303Not Available505Open in IMG/M
3300009808|Ga0105071_1106822Not Available514Open in IMG/M
3300009814|Ga0105082_1027964Not Available885Open in IMG/M
3300009819|Ga0105087_1020513Not Available950Open in IMG/M
3300010043|Ga0126380_11899887Not Available541Open in IMG/M
3300010046|Ga0126384_10003889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9114Open in IMG/M
3300010046|Ga0126384_11211648Not Available697Open in IMG/M
3300010047|Ga0126382_10029234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2997Open in IMG/M
3300010047|Ga0126382_10034678All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2809Open in IMG/M
3300010047|Ga0126382_10346694All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium1136Open in IMG/M
3300010047|Ga0126382_11613596Not Available602Open in IMG/M
3300010358|Ga0126370_10082169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2170Open in IMG/M
3300010358|Ga0126370_10328945All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1225Open in IMG/M
3300010358|Ga0126370_11591461All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae625Open in IMG/M
3300010359|Ga0126376_10006115All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae7252Open in IMG/M
3300010359|Ga0126376_10092225All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2285Open in IMG/M
3300010359|Ga0126376_12350062Not Available579Open in IMG/M
3300010360|Ga0126372_10018935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4003Open in IMG/M
3300010360|Ga0126372_10704808All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium986Open in IMG/M
3300010360|Ga0126372_10795926Not Available936Open in IMG/M
3300010360|Ga0126372_11576866All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales695Open in IMG/M
3300010360|Ga0126372_13030727All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae521Open in IMG/M
3300010362|Ga0126377_10087349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2815Open in IMG/M
3300010362|Ga0126377_10121015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2418Open in IMG/M
3300010362|Ga0126377_10421927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1350Open in IMG/M
3300010362|Ga0126377_10654058Not Available1100Open in IMG/M
3300010362|Ga0126377_10829593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium984Open in IMG/M
3300010362|Ga0126377_10874141All Organisms → cellular organisms → Bacteria → Proteobacteria961Open in IMG/M
3300010362|Ga0126377_11983155Not Available658Open in IMG/M
3300010366|Ga0126379_11226369All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium856Open in IMG/M
3300010376|Ga0126381_103753625Not Available594Open in IMG/M
3300010398|Ga0126383_10557544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1212Open in IMG/M
3300012199|Ga0137383_10763403Not Available706Open in IMG/M
3300012204|Ga0137374_10160042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1996Open in IMG/M
3300012360|Ga0137375_10020794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7618Open in IMG/M
3300012360|Ga0137375_11284007Not Available554Open in IMG/M
3300012469|Ga0150984_104021838All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium768Open in IMG/M
3300012683|Ga0137398_10637177Not Available738Open in IMG/M
3300012685|Ga0137397_10007012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7830Open in IMG/M
3300012925|Ga0137419_10784143Not Available778Open in IMG/M
3300012927|Ga0137416_10420892Not Available1136Open in IMG/M
3300012929|Ga0137404_12267718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae508Open in IMG/M
3300012930|Ga0137407_10362007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1337Open in IMG/M
3300012930|Ga0137407_10889683Not Available842Open in IMG/M
3300012948|Ga0126375_10155403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1448Open in IMG/M
3300012948|Ga0126375_10354877All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1042Open in IMG/M
3300012948|Ga0126375_10412619All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales980Open in IMG/M
3300012971|Ga0126369_10341922All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1515Open in IMG/M
3300012976|Ga0134076_10468336Not Available571Open in IMG/M
3300015245|Ga0137409_10000625All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales39008Open in IMG/M
3300015264|Ga0137403_10142873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2365Open in IMG/M
3300015371|Ga0132258_13529361All Organisms → cellular organisms → Bacteria → Proteobacteria1071Open in IMG/M
3300018000|Ga0184604_10026815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1427Open in IMG/M
3300018028|Ga0184608_10017665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2542Open in IMG/M
3300018051|Ga0184620_10120149Not Available828Open in IMG/M
3300018053|Ga0184626_10358604Not Available592Open in IMG/M
3300018054|Ga0184621_10031590All Organisms → cellular organisms → Bacteria1694Open in IMG/M
3300018076|Ga0184609_10032927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2140Open in IMG/M
3300018078|Ga0184612_10174352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1121Open in IMG/M
3300018468|Ga0066662_11640907Not Available671Open in IMG/M
3300019883|Ga0193725_1144210Not Available519Open in IMG/M
3300020170|Ga0179594_10026119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium1822Open in IMG/M
3300024347|Ga0179591_1029079All Organisms → cellular organisms → Bacteria2008Open in IMG/M
3300026325|Ga0209152_10071142All Organisms → cellular organisms → Bacteria → Proteobacteria1260Open in IMG/M
3300027324|Ga0209845_1010397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1569Open in IMG/M
3300027654|Ga0209799_1038450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1066Open in IMG/M
3300027735|Ga0209261_10003946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium oligotrophicum3955Open in IMG/M
3300027903|Ga0209488_10001024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales23730Open in IMG/M
3300027949|Ga0209860_1053764Not Available534Open in IMG/M
3300031720|Ga0307469_10200663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1557Open in IMG/M
3300032174|Ga0307470_10056596All Organisms → cellular organisms → Bacteria → Proteobacteria2041Open in IMG/M
3300032180|Ga0307471_102158251Not Available701Open in IMG/M
3300032180|Ga0307471_102435894Not Available662Open in IMG/M
3300033475|Ga0310811_10892209Not Available805Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil28.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil16.10%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.78%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.78%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.93%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.24%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.39%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment2.54%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009808Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50EnvironmentalOpen in IMG/M
3300009814Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60EnvironmentalOpen in IMG/M
3300009819Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300027324Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027735Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027949Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12082334923300002568SoilMSEFATFIADVPGLTDYTRRLYLLIDRQAVQIGKRLAAMHRSTALRGCTGSPWMVAQSHDLAEALDTDARLAAIKSLRVWATRHEGIGNTWINWYVALLKAHISEKRQPATRR*
Ga0066398_1010616123300004268Tropical Forest SoilMADFATFIEQMPGLADYARRMYLMIDREAVRVGKGIAATHDPVTLRARIGSPWLTGECRELADALETDVRLAAIKSLRAWAAQPDGIGNTWINWYVALLKAHIEHEAAAAFGE
Ga0066395_1040195023300004633Tropical Forest SoilVVDFATFLEDMPDLTNYARRLYLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECHELADTLEMDGRLAAIRSLRAWAARPDGIGNTWINWYVTLLEAHLRESASSQKETEIAR*
Ga0062380_1002868533300004779Wetland SedimentGLTDYARRLYLLIDRQAIRIGKRLAAIHHPAALRMRMGSPWMIAECRELADALEMDARLAAIKSLRAWAARPDGIGNTWINWYLTLLKAHIQDRAASRKGYKSHIDR*
Ga0062378_1000265133300004780Wetland SedimentMSDFATFLDDMPGLTDYARRLYLLIDRQAIRIGKRLAAIHHPAALRMRMGSPWMIAECRELADALEMDARLAAIKSLRAWAARPDGIGNTWINWYLTLLKAHIQDRAASRKGYKSHIDR*
Ga0066685_1036875433300005180SoilMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRLATARRPAGLRVPSSPWMVAERCELADALEADNRLAAIKSLRAWAARPDGIGNTWINWYVTLLK
Ga0066676_1042025123300005186SoilMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRLATARRPAGLCVPSSPWMVAERCELADALEADNRLAAIKSLRAWAARPDGIGNTWINWYVTLLKAHIEKGADASPAIGPGSSSSECQM*
Ga0066388_10000496333300005332Tropical Forest SoilMADFATFIEQMPGLADYARRMYLMIDQEAVRVGKELAATHDPATLRALTGSPWLTEDCRELADALETDVRLAAIKSLRAWAAQPDGIGNTWINWYVALLKAHIEHEAAAMFGEAAE*
Ga0066388_10001060173300005332Tropical Forest SoilMCDFATFIEDMPGLTDYARRLHLLIDQHAVRVGRRLAATRHPAALRVPFGSPWMVAERHELADALEADDRLAAIKSLRAWATRPEGIGNIWINWYVTLLKAHVQKTAASRKKGQIVP*
Ga0066388_10008807213300005332Tropical Forest SoilDYARRMYLMIDREAVRVGKGLAATHDPVMLRACTGSPWLTEHCRELADALEIDVRLAAIKSLRAWAAQPAGIGNTWINWYVTLLKAHIDHEAAAAFGQAAE*
Ga0066388_10015305633300005332Tropical Forest SoilMSEFATFIADMPGFTDYARRLYLLIDRQAICVGRRLAAMHRSTALRARAGPPWIVAECHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVTLLEAHISEKQKHLEAPKRSVVTAFQNRSPFRPTYHPLAH*
Ga0066388_10020577533300005332Tropical Forest SoilMSDFATFLEDMPGLTDYARRLHLLIDRQAICVGKRLAAAHRPTALPARAGSPWIVAECRELADALKVDSRLAAIKSLRAWAARPNGIGNTWINWYVTLLKAHVQERAAGRKEAQITP*
Ga0066388_10028864733300005332Tropical Forest SoilMAISDFATFIEQMPGLTEDARRLYLRIDAEATRVGKRLAAMHEPAALRRRTGSPWLVEHCHDLADALETDKRLAAIGPLRAWAAQPDGIGNTWINWYVTLLKAHIGQRHTGDGSSRVKAKGKHNNQPVAAQAQSCA*
Ga0066388_10057801633300005332Tropical Forest SoilMVDFATFIEQMPGLGDYARRMYLMIDREAARVGKGLAATHDPVTLRARTGSPWLTEDSRELADALEIDIRLAAIKSLRAWAAQPDGIGNSWINWYVTLLKAHIEHEAAAAFREAAE*
Ga0066388_10060979733300005332Tropical Forest SoilMDMADFATFLQDIPGLTDYARRLYLLIDREAACVGKRLANTHLPATLRMRAGSPWLVAECRELADALEMDNRLAAIRSLRAWAARPDGIGNTWINWYVALLKAHLQGRATRQRKTEIAC*
Ga0066388_10073284833300005332Tropical Forest SoilMSEFATFIADVPGLTDYARHLYLLIDRQAIRVGRRLAVAHRSTALCTRVGSPWILAECDGLADALDTDVRLAAIKSLRAWAKRSEGIGNTWINWYVALLQAHISEKKRRKAKSDTDRH*
Ga0066388_10340216713300005332Tropical Forest SoilMSEFTTFITDLPGLTDYARRLYLLIDRQAICVGRRLAAMHRSTALRAHAGPPWIVAECQGLAEALDTDARMAAIKSLRAWATRPEGIGNTWINWYVLLLKAQISEKQKQPNAPW*
Ga0066388_10500292513300005332Tropical Forest SoilIWMHSMAISDFATFIEQMPGLTEDARRLYLRIDAEATRVGERLAAMHEPAALRRRTGSPWLVEHCRELADAIETDVRLAAIGPLRAWAAQPDGIGNTWINWYGTLLKAHIGQQQAMLMEAADGAPSEDMLPDPNPVAAQAPPCA*
Ga0066686_1030504023300005446SoilMRRARTTDMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRLATARRAAGLCVPSSPWMVAERCELADALEADNRLAAIKSLRAWAARPDGIGNTWINWYVTLLKAHVQETAASRKEAQIAP*
Ga0066689_1031213423300005447SoilMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRLATARRPAGLCVPSSPWMVAERCELADALEADNRLAAIKSLRAWAARPDGIGNTWINWYVTLLKSHAQETAVSQKEAQIAR*
Ga0066697_1008424723300005540SoilMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRIAAAQRPNALRPRAGSPWIVAERRELAGALKADDRLAAIKSLRAWAARPDGIGNTWINWYVTLLKSHAQETAVSQKEAQIAR*
Ga0066698_1016605323300005558SoilMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRLATARRPAGLRVPSSPWMVAERCELADALEADNRLAAIKSLRAWAARPDGIGNTWINWYVTLLKAHVQETAVSQKEAQIAR*
Ga0066905_10012721333300005713Tropical Forest SoilMCDFATFIEDMPGLTDYARHLYLLIDQQAVCVGKRLAAAHRPTAPRARVGSPWMVAEHRELVGALEADDRLAAIKSLRAWAARPDGIGNTWINWYVTLLKAHVHETAASRREAQIVP*
Ga0066905_10013400933300005713Tropical Forest SoilMSEFATFIADVPGLTDYARHLYLLIDRQAIRVGRRLAVAHRSTALCTRVGSPWILAECDGLADALDTDVRLAAIKSLRAWATRSEGIGNTWINWYVALLQAHISEKKRRKAKSDTDRH*
Ga0066903_10021800223300005764Tropical Forest SoilMCDFATFIEDMPGLTDYARRLHLLIDQHAVRVGRRLAATRHPAALRVPFGSPWMVAERHELADALEADDRLAAIKSLRAWATRPEGIGNVWINWYVTLLKAHVQKTAASRKKAQVVP*
Ga0066903_10059060043300005764Tropical Forest SoilMADFATFIEQMPGLGDYARRMYLMIDREAVRVGKGLAATHDPVMLRACTGSPWLTEHCRELADALEIDVRLAAIKSLRAWAAQPAGIGNTWINWYVTLLKAHIDHEAAAAFGQAAE*
Ga0066903_10071801413300005764Tropical Forest SoilVVDFATFLEDMPDLTNYARRLYLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECHELADTLEMDGRLAAIRSLRAWAARPDGIGNTWINWYVTLLE
Ga0074472_1066061093300005833Sediment (Intertidal)MSDFATFLDDMPGLTDYARRLYLLIDRQAIRIGKRLAAIHHPAALRMRTGSPWMIAECRELADALEMNARLAAIKSLRAWAARPDGIGNTWINWYLTLLKAHIQDRAASRKGYKSHIDR*
Ga0074472_1123305113300005833Sediment (Intertidal)MTDFPTFIEQMPGLADDARRIYLMIDAEAARVGAGLAATRNPAALRKRTGSPWLVEHCRELADALDTDPRLAAIGALRAWAAGPDGIGNTWINWYVALLKAHIESKAQQPILTEAAE*
Ga0068863_10128501713300005841Switchgrass RhizosphereMSEFATFIADAPGLTDYARRLYLLIDRQAIQVGRQLAATHRSTALRTRAGSPWIVAECRNLAEALGTDERLAAIKSLRVWATRPEGIGNTWINWYVALLKAHIREQAAAK*
Ga0081455_1002256773300005937Tabebuia Heterophylla RhizosphereMSDFATFLNNMPGLTDYARRLYLLIDRQAVCVGRRLAAAHHPTALRARAGSPWIIAECCELADALAMDDRLAAVRSLRAWATRPAGIGNTWINWYVTLLQAHLEENEASEKAHIAPRTLS
Ga0066656_1047455923300006034SoilMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRLATARRPAGLCVPSSPWMVAERCELADALEADNRLAAIKSLRAWAARPDGIGNTWINWYVTLLKSHARKQR*
Ga0075428_10081160523300006844Populus RhizosphereMSEFTTFITDMPGLTDYARRLYLLIDRQAIRVGRQLAAMHRSTALRTRAGSPWMVVECRNIAEALDSDERLAAIKSLRAWATRPEGIGNTWINWYVALLKAHIREQTVAK*
Ga0075433_1007248963300006852Populus RhizosphereMSEFTTFITDMPGLTDYARRLYLLIDRQAIRVGRQLAAMHRSTALRTRAGSPWMVVECRNIAEALDTDERLAAIKSLRAWATRPEGIGNTWINWYVALLKAHIREQTVAK*
Ga0075425_10012845633300006854Populus RhizosphereMSEFATFISDAPGLTEYARRLYLLIDRQAIHVGQQLAAMHVSTALRTRAGSPWMLAECRNLAEALNTDERLAAIKSLRVWATRPEGIGNTWINWYVALLKAHIRDRAVAK*
Ga0075424_10111224823300006904Populus RhizosphereMSEFATFISDAPGLTEYARRLYLLIDRQAIHVGQQLAAMHVSTALRTRAGSPWMLAECRNLAEALNTDERLAAIKSLRVWATRPEGIGNTWINWYVALLKAHIRDRA
Ga0079219_1222024813300006954Agricultural SoilMSEFATFIADVPGLTDYARRLYLLIDRQAVHVGNRLAAMHRSTALRGRTASPWLVAQCHDLAEALDTDVRLAAIKSLRVWATRPEGIGNTWINWYVTLLTAHISEKSRQESDVGH*
Ga0099795_1002881733300007788Vadose Zone SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAVHKSRALRARAGSPWIVAERHGLAEALDTDARLAAVKSLRAWATRPEGIGNTWINWYVMLLKAHISEKRTPGSDVEH*
Ga0111539_1037855133300009094Populus RhizosphereMSEFTTFITDMPGLTDYARRLYLLIDRQAIRVGRQLAAMHRSTALRTRAGSPWMVVECRNIAEALDSDERLAAIKSLRAWATRPEGIGNTWINWYVAL
Ga0066709_10463837813300009137Grasslands SoilMSEFASFIADVPGVTDYARRLYLLIDRQAICVGKRLAAMHRSTALRARAGSPWVMAECHGLAEALDTDARLAAIKSLRSWATRPEGIGNTWINWYVALLKAHISEKRRKAK
Ga0114129_1139166413300009147Populus RhizospherePGLTEYARRLYLLIDRQAVHAGQQLAAMHRSTALRTRAGSPWMVVECRNLADALDADGRLAAIKSLRAWATRPEGIGNTWINWYVALLKAHIRDRTEAQ*
Ga0114129_1268017613300009147Populus RhizosphereMSDFATFIERMPGLTEDARRIYLMIDAEAVRVGERLAAMHDPPALRGNPGSPWLVQHCRELADALEIDVRLAAIGALRAWAAQPDGIGNTWINWYVALLKAHIE
Ga0075423_1011770963300009162Populus RhizospherePGLTNYARRLYLLIDRQAIRVGRQLAAMHRSTALRTRAGSPWMVVECRNIAEALDTDERLAAIKSLRAWATRPEGIGNTWINWYVALLKAHIREQTVAK*
Ga0126374_1084936513300009792Tropical Forest SoilMSEFATFIADVPGLTDYARRLYLLIDRQAVCVGRQLATMHRSTALRARTGSPWIVAECHDLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVLLLKAQISEKQKQPNAPW*
Ga0126374_1185830313300009792Tropical Forest SoilDFATFIEQMPGLGDYARRMYLMIDREAARVGKGLAATHDPVTLRARTGSPWLTEDSRELADALEIDIRLAAIKSLRAWAAQPDGIGNSWINWYVTLLKAHIEHEAAAAFREAAE*
Ga0105071_110682213300009808Groundwater SandMRAIAMADFTTFIEEMPGLTDDARRIYRMIDKEAARVGATLAATHDPAALRARTGSPWLVEHCRELADALDTDVRLAAISTLRAWAAQPDGIGNTWINWYVALLKAHIEQKPLLAEAAE*
Ga0105082_102796413300009814Groundwater SandMNDFATFIEEMPGLTDDARRIYLMIDAEAVRIGGRLAARHDPAELRARTGSPWLVEHCRERADALETDARLAAIGALRAWAAQPDGIGNTWINWYVTLLEAHVAQKATLVRAEAAE*
Ga0105087_102051313300009819Groundwater SandMNDFATFIEEMPGLTDDARRIYLMIDAEAARIGGRLAARHDPAELRARTGSPWLVEHCRERADALETDARLAAIGALRAWAAQPDGIGNTWINWYVTLLEAHVAQKATLVRAEAAE*
Ga0126380_1189988713300010043Tropical Forest SoilMVDFATFIEQMPGLGDYARRMYLMIDREAARVGKGLAATHDPVTLRARTGSPWLTKDSRELADALEIDIRLAAIKSLRAWAAQPDGIGNSWINWYVTLLKAHIEHEAAAAFREAAE*
Ga0126384_1000388923300010046Tropical Forest SoilMADFATFIEQMPGLADYARRMYLMIDREAVRVGKGIAATHDPVTLRARIGSPWLTGECRELADALETDVRLAAIKSLRAWAAQPDGIGNTWINWYVALLKAHIEHEAAAAFGEAAE*
Ga0126384_1121164813300010046Tropical Forest SoilMADFATFIEQMPGLGDYARRMYLMIDREAVRVGKGLAATHDPVMLRACTGSPWLTEHCRELADALEIDVRLAAIKSLRAWAAQPDGIGNTWINWYVTLLKAHIDHEVAAAFGQAAE*
Ga0126382_1002923423300010047Tropical Forest SoilMSEFATFIADVPGLTDYARRLYLLIDRQAVCVGRRLATMHRSTALRARTGSPWIVAECHDLAEALDTDARLAAIKSLRAWAMRPDGIGNTWINWYVALLKAHISEKSRLESEIRH*
Ga0126382_1003467823300010047Tropical Forest SoilMCDFATFLEDMPGLTDYARRLHLLIDRQAICVGKRLAAAHRPTALPARAGSPWIVAECRELADALKVDSRLAAIKSLRAWAARPNGIGNTWINWYVTLLKAHVQERAAGRKEAQITP*
Ga0126382_1034669423300010047Tropical Forest SoilVRRGKATAMCDFATFLEDMPGLTDYARRLHLLIDRQAVWVGKRLAAAHRPTAPPVRAGSPWMVAECRELADALEVDDRLAAIKSLRAWAARPNGIGNTWINWYVTLLKAHVQERAAGRKEAHIAP*
Ga0126382_1161359623300010047Tropical Forest SoilDYARRLYLLIDRQAVRVGRRLAAAYRPTAVRARAGSPWVGAECRELADALATDDRLAAIKSLRAWAARPAGIGNTWINWYVTLLEAPLEENAASEKGLGSPRTHSHDSARV*
Ga0126370_1008216923300010358Tropical Forest SoilVVDFATFLEDMPDLINYARRLYLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECHELADTLEMDGRLAAIRSLRAWAARPDGIGNTWINWYVTLLEVHLRQSASSQKETEIAR*
Ga0126370_1032894533300010358Tropical Forest SoilMCDFATFIEDMPGLTDYARRLHLLIDQHAVRVGRRLAATHHPAALRVPFGSPWMVAERHELADALEADDRLAAIKSLRAWATRPEGIGNIWINWYVTLLKAHVQKTAASR
Ga0126370_1159146113300010358Tropical Forest SoilVVDFATFLEDMPDLTNYARRLYLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECRELADTLEMDGRLAAIKSLRAWAARPDGIGNTWINWYVTLLEAHLRQSASSQKETEIAR*
Ga0126376_1000611533300010359Tropical Forest SoilMCDFATFIEDMPGLTDYARRLHLLIDQHAVRVGRRLAATHHPAALRVPFGSPWMVAERHELADALEADDRLAAIKSLRAWATRPEGIGNIWINWYVTLLKAHVQKTAASRKKAQIVP*
Ga0126376_1009222513300010359Tropical Forest SoilMTDFATYIQEMPGLTDDARRIYRMIDAEAARVGGRLAERHDPSALRARTGSPWLVEHCRELADALETDARLAAIGALRAWAAQPDGIGNTWINWYVTLLEAHIAQNAALIRAEAAE*
Ga0126376_1235006213300010359Tropical Forest SoilTFIEQMPGLADYARRMYLMIDQEAVRVGKELAATHDPATLRALTGSPWLTEDSRELADALEIDIRLAAIKSLRAWAAQPDGIGNSWINWYVTLLKAHIEHEAAAAFREAAE*
Ga0126372_1001893533300010360Tropical Forest SoilMCDFATFIEDMPGLTDYARRLHLLIDQHAVRVGRRLAATHHPAALRVPFGSPWMVAERRELADALEADDRLAAIKSLRAWATRPEGIGNIWINWYVTLLKAHVQKTAASRKKAQVVP*
Ga0126372_1070480823300010360Tropical Forest SoilYARRMYLMIDQEAVRVGKELAATHDPATLRALTGSPWLTEDCRELADALETDVRLAAIKSLRAWAAQPDGIGNTWINWYVALLKAHIEHEAAAMFGEAAE*
Ga0126372_1079592613300010360Tropical Forest SoilVVDFATFLEDMPDLTNYARRLYLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECHELADTLEMDGRLAAIRSLRAWAARPDGIGNTWINWYVTLLEAHLRQSASSQKKTEIAR*
Ga0126372_1157686613300010360Tropical Forest SoilMSEFATFIAGAPGLNDYARRLYLLIDRQAIHVGKQLATMHRSTALRTRAGSPWMVAECRHIAEALDTDERLAAIKSLRAWATRPEGIGNTWINWYIALLKAHIREQAEAR
Ga0126372_1303072713300010360Tropical Forest SoilMSDFATFLDNVPGLTDYTRRLYLLIDRQAVCVGRRLAAAHRQTALRVRAGSPWMVAECHELADALEVDDRLAAIRSLRAWAARPDGIGNTWINWYVMLL
Ga0126377_1008734933300010362Tropical Forest SoilMCDFATFIEDMPGLTDYARRLHLLIDQHAVRVGRRLAATHHPAVLRVPTGSPWIVAERRELADALAADDRLAAIKSLRAWATRPEGIGNIWINWYVTLLKAHVQKTAASRKKGQIVP*
Ga0126377_1012101533300010362Tropical Forest SoilMSDFATFLNNMPGLTDYARRLYLLIDRQAVCVGRRLAAAHHPTALRARAGSPWMIAECCELADALAMDDRLAAVRSLRAWATRPAGIGNTWINWYVTLLRAHLEENEASEKEAHFAPPTLS*
Ga0126377_1042192723300010362Tropical Forest SoilMCDFATFLEDMPGLTDYARRLHLLIDRQAVWVGKRLAAAHRPTAPPVRAGSPWMVAECRELADALEVDDRLAAIKSLRAWAARPNGIGNTWINWYVTLLKAHVQERAAGRKEAQITL*
Ga0126377_1065405823300010362Tropical Forest SoilMTDFATYIQEMPGLTDDARRIYRMIDAEAARVGGRLAERHDPGALRARTGSPWLVEHCRELADALETDARLAAIGALRAWAAQPDGIGNTWINWYVTLLEAHIAQNAALIRAEAAE*
Ga0126377_1082959313300010362Tropical Forest SoilDYARRMYLMIDREAARVGKGLAATHDPVTLRARTGSPWLTKDSRELADALEIDIRLAAIKSLRAWAAQPDGIGNSWINWYVTLLKAHIEHEAAAAFREAAE*
Ga0126377_1087414113300010362Tropical Forest SoilMSEFAIFITDLPGLTDYARRLYLLIDRQAICVGRRLAAMHRSTALRAHAGPPWIVAECQGLAEALDTDARMAAIKSLRAWATRPEGIGNTWINWYVLLLKAQISEKQKQPNAPW*
Ga0126377_1198315513300010362Tropical Forest SoilTDMSEFPTFIADMPGLTDHARRLYLLIDRQALRVGRRLAAMHGSTALRTRAGQPWMVAECHGLAEALDTDTRLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISERQKHLNTSW*
Ga0126379_1122636913300010366Tropical Forest SoilLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECHELADTLEMDGRLAAIRSLRAWAARPDGIGNTWINWYVTLLETHLRESASGKKGTEIAR*
Ga0126381_10375362513300010376Tropical Forest SoilMRAQAMADFATFIEQMPGLGDYARRMYLMIDREAVRVGKGLAATHDPVMLRACTGSPWLTEHCRELADALEIDVRLAAIKSLRAWAAQPDGIGNTWINWYVALLKAHIEHEAAAMFGEAAE*
Ga0126383_1055754423300010398Tropical Forest SoilVVDFATFLEDMPDLTNYARRLYLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECHELADALEMDGRLAAIRSLRAWAARPDGIGNTWINWYVTLLEAHLRESASSQKETEIAR*
Ga0137383_1076340313300012199Vadose Zone SoilMSEFATFIADLPGLTDYARRLYLLIDRQAIHVGRQLAAMHKSTALRTRAGSPWIVAECRDLTKALDADKRLAGIKSLRAWATHPAGIGNTWINWYVALLKAHIREEAAGPSEVESVSDRH
Ga0137374_1016004233300012204Vadose Zone SoilMTIPDFATFLEQMPGLTDDARRLYLTIDAEATRVGKRLAAMHDAAALRARTGSPWLVEHCRELADALETDVRLAAINPLRAWAAQPDGIGNTWVNWYVTLLKAHVAAQHTQVAEAAE*
Ga0137375_10020794123300012360Vadose Zone SoilMRSPLVNAYGYAPMTIPDFATFLEQMPGLTDDARRLYLTIDAEATRVGKRLAAMHDAAALRARTGSPWLVEHCRELADALETDVRLAAINPLRAWAAQPDGIGNTWVNWYVTLLKAHVAAQHTQVAEAAE*
Ga0137375_1128400723300012360Vadose Zone SoilFIADVPGLTDYARRLYLLIDRQAICVGRRLASMHKSRALRARPGSPWIVAERHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVVLLKAHISQKRTPGSDAGH*
Ga0150984_10402183813300012469Avena Fatua RhizosphereFATFLEQMPGLTDDARRLYLMIDAEAVHVGEKLAATHNPDDLRTRPGSPWLVEHCRALSDSLTTDLRLAAVPALRAWAAQPDGIGNTWINWYVTLLRAHIEQHMALVTEAAE*
Ga0137398_1063717713300012683Vadose Zone SoilFTICEIAVALRAADMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAVHKSRALRARAGSPWIVAERHGLAEALDTDARLAAVKSLRAWATRPEGIGNTWINWYVMLLKAHISEKRTPGSDVEH*
Ga0137397_1000701233300012685Vadose Zone SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSPWIVAERHGLAEALDTDARLAAIKSLRAWAARPEGIGNTWINWYVALLKAHISEKRTSGSDIGH*
Ga0137419_1078414323300012925Vadose Zone SoilATFIADVPGLTDCARRLYLLIDRQAICVGRRLDAMHKSTALRARAGSPWIVAERHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVMLLKAHISEKRTPGSDVEH*
Ga0137416_1042089213300012927Vadose Zone SoilMSEFATFIADVPGLTDCARRLYLLIDRRAFCVGRRLSAMHRSTALRARAGSPWMMAECHGLAEALDTDARLAAIKSLRPWATRPEGIGNTWINWYVALLKAHISEEKKRRKAKSDADRH*
Ga0137404_1226771813300012929Vadose Zone SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLTAMHNSTALRTRAGSPWIVAERHGLAGALDTDARLAAIKSLRAWATRPEGIGNSWIN
Ga0137407_1036200723300012930Vadose Zone SoilMSEFATFITDVPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRARAGSPWIVAERHGLAEALDTDARLAAVKSLRAWATRPEGIGNTWINWYVMLLKAHISEKRTPGSDVGH*
Ga0137407_1088968313300012930Vadose Zone SoilMSEFATFIADVPGLTDYARRLHLLIDRQAICVGRRLAAMHKSTALRTRAGSPWIVAERHGLAEALDTDARLAAIKSLRAWAARPEGIGNTWINWYVALLKAHISEKRTSGSDIGH*
Ga0126375_1015540323300012948Tropical Forest SoilMCDFATFLEDMPGLTDYARRLHLLIDRQAICVGKRLAAAHRPIALPVRAGSPWIVAECRELADALEVDSRLAAIKSLRAWAARPNGIGNTWINWYVTLLNAHVQERAAGRKEAQITL*
Ga0126375_1035487723300012948Tropical Forest SoilMSEFATFIADVPGLTDYARRLYLLIDRQAVCVGRRLATMHRSTALRARTGSPWIVAECHDLAEALDTDARLAAIKSLRAWAARPDGIGNTWINWYVALLKAHISEKSRLESEIRH*
Ga0126375_1041261923300012948Tropical Forest SoilVVDFATFLEDMPDLTNYARRLYLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECHELADTLEMDGRLAAIRSLRAWAARPDGIGNTWINWYVTLLEVHLRQSASSQKKTEIAR*
Ga0126369_1034192223300012971Tropical Forest SoilVVDFATFLEDMPDLTNYARRLHLLIDRQAVRVGRRLAAAHHPSALRARTGSPWIVAECHELADTLEMDGRLAAIRSLRAWAARPDGIGNTWINWYVTLLEAHLRQSASSQKETEIAR*
Ga0134076_1046833613300012976Grasslands SoilMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRLATARRPAGLCVPSSPWMVAERCELADALEADNRLAAIKSLRAWAARPDGIGNTWINWYVTLLKAHVQETAASREEAQIAP*
Ga0137409_10000625353300015245Vadose Zone SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSPWIVAERHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRTSGSDIGH*
Ga0137403_1014287323300015264Vadose Zone SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLTAMHNSTALRTRAGSPWIVAERHGLAEALDTDARLAAIKSLRAWATRPDGIGNTWINWYVALLKAHISERRTPRSEVGH*
Ga0132258_1352936113300015371Arabidopsis RhizosphereMSEFATFIADAPGLTDYARRLYLLIDRQAIQVGRQLAATHRSTALRTRAGSPWIVAECRNLAEALGTDERLAAIKSLCVWATRPEGIGNTWINWYVALLKAHIREQAVAK*
Ga0184604_1002681513300018000Groundwater SedimentMSEFATFIADVPGLTDYARRLYLLIDRQAIGVGRRLAAMHKSTALRTRAGSPWIVTERHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRPPGSDVGH
Ga0184608_1001766533300018028Groundwater SedimentMSEFATFIADLPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSRWIVAERHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRTPGSDIGH
Ga0184620_1012014913300018051Groundwater SedimentLVHERQDMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSRWIVAERHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRTPGSDIGH
Ga0184626_1035860413300018053Groundwater SedimentNIGCPMNDFATFIEEMPGLTDDARRIYLMIDAEAVRIGGRLAARHDPAELRARTGSPWLVEHCRERADALETDARLAAIGALRAWAAQPDGIGNTWINWYVTLLEAHVAQKATLVRAEAA
Ga0184621_1003159033300018054Groundwater SedimentMSEFATFIADLPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSRWIVAERHGLAEALETDSRLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRTPGSDIGH
Ga0184609_1003292733300018076Groundwater SedimentPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSRWIVAERHGLAEALDTDSRLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRTPGSDIGH
Ga0184612_1017435223300018078Groundwater SedimentMNDFATFIEEMPGLTDDARRIYLMIDAEAVRIGGRLAARHDPAELRARTGSPWLVEHCRERADALETDARLAAIGALRAWAAQPDGTGNTWINWYVTLLEAHVAQKATLVRAEAAE
Ga0066662_1164090713300018468Grasslands SoilRRARTTDMCDFATFIADMPGLTDYARRLYLLIDQQAICVGKRLATARRPAGLCVPSSPWMVAERCELADALEADNRLAAIKSLRAWAARPDGIGNTWINWYVSLLKAHVQETAVSQKEAQIAR
Ga0193725_114421023300019883SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSPWIVAECHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRTPGSDIG
Ga0179594_1002611923300020170Vadose Zone SoilMSEFATFIADVPGLTDCARRLYLLIDRQAICVGRRLDAMHKSTALRARAGSPWIVAERHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHIRETAAGR
Ga0179591_102907923300024347Vadose Zone SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAMHKSTALRTRAGSPWIVAERHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKRTPGSDIGH
Ga0209152_1007114223300026325SoilMPQATDMSDFATFIADVPGLTHYARSLYLLIDRQAVHVGRQLAAMHRSAALRARAGAPWMVAQCHDVAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLRTHIEKRPLRGEVRH
Ga0209845_101039713300027324Groundwater SandMNDFATFIEEMPGLTDDARRIYLMIDAEAVRIGGRLAARHDPAELRARTGSPWLVEHCRERADALETDARLAAIGALRAWAAQPDGIGNTWINWYVTLLEAHVAQKATLVRAEAAE
Ga0209799_103845023300027654Tropical Forest SoilMADFATFIEQMPGLADYARRMYLMIDREAVRVGKGIAATHDPVTLRARIGSPWLTGECRELADALETDVRLAAIKSLRAWAAQPDGIGNTWINWYVTLLKAHIDHEAAAAFGEAAE
Ga0209261_1000394643300027735Wetland SedimentMSDFATFLDDMPGLTDYARRLYLLIDRQAIRIGKRLAAIHHPAALRMRMGSPWMIAECRELADALEMDARLAAIKSLRAWAARPDGIGNTWINWYLTLLKAHIQDRAASRKGYKSHIDR
Ga0209488_1000102463300027903Vadose Zone SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICVGRRLAAVHKSRALRARAGSPWIVAERHGLAEALDTDARLAAVKSLRAWATRPEGIGNTWINWYVMLLKAHISEKRTPGSDVEH
Ga0209860_105376413300027949Groundwater SandIYLMIDAEAARIGGRLAARHDPAELRARTGSPWLVEHCRERADALETDARLAAIGALRAWAAQPDGIGNTWINWYVTLLEAHVAQKATLVRAEAAE
Ga0307469_1020066323300031720Hardwood Forest SoilMSDFATFLNNMPGLTDYARRLYLLIDRQAVRVGRRLAAADYPTAFRVRAGSPWVVAECRELADALATDDRLAAIRSLRAWAARPAGIGNIWINWYVTLLKAHLEENAADEKGARIASHTL
Ga0307470_1005659623300032174Hardwood Forest SoilMSEFATFIADAPGLTDYARRLYLLIDRQAIQVGRQLAAVHRSTALRTRAGSPWMVVECRSLAEAFDTDERLAAIKSLRVWATRPEGIGNTWINWYVALLKAHIREQAVSK
Ga0307471_10215825113300032180Hardwood Forest SoilMSDFATFLNNMPGLTDYARRLYLLIDRQAVRVGRRLAAADYPTAFRVRAGSPWVVAECRELADALATDDRLAAIRSLRAWAARPAGIGNIWINWCVTLLKAHLEENAADEKGARIASHTL
Ga0307471_10243589423300032180Hardwood Forest SoilMSEFATFIADVPGLTDYARRLYLLIDRQAICIGRRLAAMHRSTALRERAGSPWMGAECHGLAEALDTDARLAAIKSLRAWATRPEGIGNTWINWYVALLKAHISEKKKRRKAKSDADRH
Ga0310811_1089220923300033475SoilMTDFITFLEQMPGLTDDARRLYLMIDAQAVRVGEKLAATHEPAALHTRRGPPWLVEHCHDLADALATDVRLAAVPSLRAWAAQPDGIGNTWINWYVTLLKAHIAEDAAPIAEAAE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.