Metagenome Family F075812

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075812
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	91 residues
Representative Sequence	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKIIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKSWEQHQNEKR
Number of Associated Samples	69
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.02 %
% of genes near scaffold ends (potentially truncated)	28.81 %
% of genes from short scaffolds (< 2000 bps)	81.36 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.864 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.881 % of family members)
Environment Ontology (ENVO)	Unclassified (32.203 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.339 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.38% β-sheet: 0.00% Coil/Unstructured: 25.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF07366	SnoaL	7.63
PF03729	DUF308	4.24
PF00072	Response_reg	2.54
PF00230	MIP	1.69
PF09851	SHOCT	1.69
PF07690	MFS_1	0.85
PF10957	Spore_Cse60	0.85
PF02518	HATPase_c	0.85
PF01872	RibD_C	0.85
PF12161	HsdM_N	0.85
PF00296	Bac_luciferase	0.85
PF00158	Sigma54_activat	0.85
PF14559	TPR_19	0.85
PF00011	HSP20	0.85
PF00571	CBS	0.85
PF04055	Radical_SAM	0.85
PF13847	Methyltransf_31	0.85
PF07452	CHRD	0.85
PF00582	Usp	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	4.24
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.69
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.85
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.85
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
All Organisms	root	All Organisms	38.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
cellular organisms	root	All Organisms → cellular organisms	36.44 %
Viruses	superkingdom	All Organisms → Viruses	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	33.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	7.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	7.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	7.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.69 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	7.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.69 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	7.63 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	3.39 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.69 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.85 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	0.85 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.69 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.85 %
Candidatus Nitrosocosmicus hydrocola	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola	0.85 %
Candidatus Nitrosocosmicus arcticus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus arcticus	0.85 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	0.85 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.85 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0304597	Not Available	515	Open in IMG/M
3300000156\|NODE_c0698124	All Organisms → cellular organisms → Archaea	3812	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1003909	All Organisms → cellular organisms → Archaea	2416	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10043100	All Organisms → cellular organisms → Archaea	1189	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10077418	Not Available	836	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1042612	Not Available	820	Open in IMG/M
3300000787\|JGI11643J11755_11689504	Not Available	1037	Open in IMG/M
3300000787\|JGI11643J11755_11781187	Not Available	532	Open in IMG/M
3300000787\|JGI11643J11755_11792500	Not Available	817	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10005220	All Organisms → cellular organisms → Archaea	3010	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10115977	Not Available	561	Open in IMG/M
3300000953\|JGI11615J12901_10254797	All Organisms → cellular organisms → Archaea	1288	Open in IMG/M
3300000953\|JGI11615J12901_10948761	Not Available	905	Open in IMG/M
3300002100\|JGI24809J26612_1000557	All Organisms → cellular organisms → Archaea	12773	Open in IMG/M
3300004114\|Ga0062593_100078564	Not Available	2222	Open in IMG/M
3300004114\|Ga0062593_100123235	All Organisms → cellular organisms → Archaea	1895	Open in IMG/M
3300004114\|Ga0062593_100632690	All Organisms → cellular organisms → Archaea	1028	Open in IMG/M
3300004156\|Ga0062589_100062495	Not Available	2162	Open in IMG/M
3300004156\|Ga0062589_102614307	Not Available	524	Open in IMG/M
3300004479\|Ga0062595_100032719	All Organisms → cellular organisms → Archaea	2164	Open in IMG/M
3300004479\|Ga0062595_100081450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1639	Open in IMG/M
3300005187\|Ga0066675_10596321	Not Available	830	Open in IMG/M
3300005332\|Ga0066388_102136113	Not Available	1009	Open in IMG/M
3300005332\|Ga0066388_102376990	All Organisms → cellular organisms → Archaea	961	Open in IMG/M
3300005332\|Ga0066388_106062908	Not Available	610	Open in IMG/M
3300005540\|Ga0066697_10481221	Not Available	708	Open in IMG/M
3300005764\|Ga0066903_105575163	Not Available	663	Open in IMG/M
3300005764\|Ga0066903_107301563	Not Available	571	Open in IMG/M
3300006844\|Ga0075428_102660966	Not Available	510	Open in IMG/M
3300006845\|Ga0075421_100207818	All Organisms → cellular organisms → Archaea	2420	Open in IMG/M
3300006845\|Ga0075421_100295710	All Organisms → cellular organisms → Archaea	1970	Open in IMG/M
3300006845\|Ga0075421_101080175	Not Available	903	Open in IMG/M
3300006847\|Ga0075431_100529044	Not Available	1168	Open in IMG/M
3300006847\|Ga0075431_101853024	Not Available	559	Open in IMG/M
3300006852\|Ga0075433_11328415	Not Available	623	Open in IMG/M
3300006854\|Ga0075425_100187165	All Organisms → cellular organisms → Archaea	2378	Open in IMG/M
3300006854\|Ga0075425_100632493	Not Available	1230	Open in IMG/M
3300006871\|Ga0075434_100063155	All Organisms → cellular organisms → Archaea	3686	Open in IMG/M
3300006871\|Ga0075434_100630666	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1090	Open in IMG/M
3300006914\|Ga0075436_100663682	Not Available	771	Open in IMG/M
3300006914\|Ga0075436_101035984	Not Available	616	Open in IMG/M
3300006954\|Ga0079219_11533334	Not Available	606	Open in IMG/M
3300007076\|Ga0075435_100215352	Not Available	1630	Open in IMG/M
3300007076\|Ga0075435_100673475	Not Available	898	Open in IMG/M
3300009147\|Ga0114129_11152271	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	968	Open in IMG/M
3300009147\|Ga0114129_12554464	Not Available	610	Open in IMG/M
3300010038\|Ga0126315_10610270	Not Available	705	Open in IMG/M
3300010040\|Ga0126308_10818596	Not Available	646	Open in IMG/M
3300010042\|Ga0126314_10002443	All Organisms → cellular organisms → Archaea	9320	Open in IMG/M
3300010042\|Ga0126314_10054427	Not Available	2610	Open in IMG/M
3300010044\|Ga0126310_10015890	All Organisms → cellular organisms → Archaea	3647	Open in IMG/M
3300010045\|Ga0126311_10281858	Not Available	1244	Open in IMG/M
3300010046\|Ga0126384_11532388	Not Available	625	Open in IMG/M
3300010047\|Ga0126382_10403423	All Organisms → cellular organisms → Archaea	1068	Open in IMG/M
3300010048\|Ga0126373_10433951	All Organisms → cellular organisms → Archaea	1345	Open in IMG/M
3300010048\|Ga0126373_10987313	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	907	Open in IMG/M
3300010048\|Ga0126373_11254312	Not Available	807	Open in IMG/M
3300010358\|Ga0126370_10003315	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	7828	Open in IMG/M
3300010358\|Ga0126370_10396128	Not Available	1133	Open in IMG/M
3300010359\|Ga0126376_10051576	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	2912	Open in IMG/M
3300010359\|Ga0126376_10970988	All Organisms → cellular organisms → Archaea	847	Open in IMG/M
3300010361\|Ga0126378_10328379	Not Available	1637	Open in IMG/M
3300010362\|Ga0126377_11007573	Not Available	899	Open in IMG/M
3300010362\|Ga0126377_11381420	Not Available	777	Open in IMG/M
3300010366\|Ga0126379_11141497	Not Available	885	Open in IMG/M
3300010366\|Ga0126379_11875747	Not Available	703	Open in IMG/M
3300010376\|Ga0126381_100843140	Not Available	1317	Open in IMG/M
3300010376\|Ga0126381_101125756	Not Available	1134	Open in IMG/M
3300010376\|Ga0126381_101322900	Not Available	1041	Open in IMG/M
3300010376\|Ga0126381_101929565	All Organisms → cellular organisms → Archaea	852	Open in IMG/M
3300010376\|Ga0126381_102896953	Not Available	683	Open in IMG/M
3300010398\|Ga0126383_10098851	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	2602	Open in IMG/M
3300010398\|Ga0126383_13604472	Not Available	506	Open in IMG/M
3300012088\|Ga0153944_1077929	Not Available	643	Open in IMG/M
3300012212\|Ga0150985_117175251	All Organisms → cellular organisms → Archaea	1161	Open in IMG/M
3300012285\|Ga0137370_10508586	Not Available	738	Open in IMG/M
3300012469\|Ga0150984_112109458	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus arcticus	1729	Open in IMG/M
3300012677\|Ga0153928_1012210	Not Available	2318	Open in IMG/M
3300012884\|Ga0157300_1009185	All Organisms → Viruses → Predicted Viral	1147	Open in IMG/M
3300012897\|Ga0157285_10005859	All Organisms → cellular organisms → Archaea	2260	Open in IMG/M
3300012901\|Ga0157288_10325010	Not Available	548	Open in IMG/M
3300012908\|Ga0157286_10015271	All Organisms → cellular organisms → Archaea	1587	Open in IMG/M
3300012908\|Ga0157286_10397775	Not Available	534	Open in IMG/M
3300012911\|Ga0157301_10037489	All Organisms → cellular organisms → Archaea	1183	Open in IMG/M
3300012955\|Ga0164298_10228898	Not Available	1107	Open in IMG/M
3300012971\|Ga0126369_12050490	Not Available	660	Open in IMG/M
3300012986\|Ga0164304_10336723	Not Available	1049	Open in IMG/M
3300013096\|Ga0157307_1026748	All Organisms → cellular organisms → Archaea	983	Open in IMG/M
3300014487\|Ga0182000_10483576	Not Available	571	Open in IMG/M
3300014488\|Ga0182001_10353504	Not Available	619	Open in IMG/M
3300014497\|Ga0182008_10036196	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2470	Open in IMG/M
3300014497\|Ga0182008_10126542	Not Available	1272	Open in IMG/M
3300014497\|Ga0182008_10658638	Not Available	594	Open in IMG/M
3300015077\|Ga0173483_10068347	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus → Candidatus Nitrosocosmicus hydrocola	1406	Open in IMG/M
3300015077\|Ga0173483_10068396	Not Available	1405	Open in IMG/M
3300015077\|Ga0173483_10666794	Not Available	582	Open in IMG/M
3300015077\|Ga0173483_10901214	Not Available	521	Open in IMG/M
3300015371\|Ga0132258_12362296	Not Available	1332	Open in IMG/M
3300016387\|Ga0182040_10885916	Not Available	739	Open in IMG/M
3300017974\|Ga0187777_10480507	Not Available	866	Open in IMG/M
3300018085\|Ga0187772_11509264	Not Available	500	Open in IMG/M
3300019356\|Ga0173481_10003921	All Organisms → cellular organisms → Archaea	3882	Open in IMG/M
3300019356\|Ga0173481_10018501	All Organisms → cellular organisms → Archaea	2088	Open in IMG/M
3300019356\|Ga0173481_10027979	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	1782	Open in IMG/M
3300019356\|Ga0173481_10461481	Not Available	637	Open in IMG/M
3300021560\|Ga0126371_10177944	All Organisms → cellular organisms → Archaea	2209	Open in IMG/M
3300021560\|Ga0126371_10451942	All Organisms → Viruses → Predicted Viral	1431	Open in IMG/M
3300021560\|Ga0126371_10483093	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300021560\|Ga0126371_11398149	Not Available	831	Open in IMG/M
3300021560\|Ga0126371_12549364	Not Available	619	Open in IMG/M
3300027909\|Ga0209382_10275224	All Organisms → cellular organisms → Archaea	1905	Open in IMG/M
3300027909\|Ga0209382_10398046	Not Available	1534	Open in IMG/M
3300027909\|Ga0209382_10548865	All Organisms → cellular organisms → Archaea	1266	Open in IMG/M
3300027909\|Ga0209382_10677108	Not Available	1113	Open in IMG/M
3300027909\|Ga0209382_10826741	Not Available	983	Open in IMG/M
3300027992\|Ga0247750_1037208	Not Available	539	Open in IMG/M
3300028705\|Ga0307276_10182530	Not Available	546	Open in IMG/M
3300031996\|Ga0308176_10259862	All Organisms → cellular organisms → Archaea	1671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.73%
Host-Associated	Host-Associated	25.42%
Engineered	Engineered	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.73%
Plants	Host-Associated → Plants	23.73%
Fungi	Host-Associated → Fungi	1.69%
Solid Waste	Engineered → Solid Waste	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Mycelium	Host-Associated → Fungi → Mycelium	1.69%
Grass	Engineered → Solid Waste → Grass	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.19%
Loam	Environmental → Terrestrial → Soil → Loam	4.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.69%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%
Composting	Engineered → Solid Waste → Grass → Composting	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.69%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.85%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.69%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_03045972	2228664021	Soil	MTWFDIYNEFIKNFEKINQLQKDYIRNLERINYLYNESIKSIDRVNNLYNEYIKNYEKMNRAYEQQFDNIQRMNQK
NODE_06981242	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MTWFDIYNEFIKKFEKIDQLQKDYILNLQQLNSLYNESIKNIERVNNLYNEYIKIYERINRSYEQHFDYMQKMNQKWFDVFSKSSGQNQNEKR*
AF_2010_repII_A01DRAFT_10039091	3300000580	Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINHLYNESIKNIERVNELYDTFIRNYEKINKAYEQQFDNMQRMNQRWLDLFSKSWEQHQNEKPKAES*
AF_2010_repII_A1DRAFT_100431002	3300000597	Forest Soil	MTWFDSYNEFIKNIEKVTQLQKDYVTNLERINHLYNESIKNIERVNELYDTFIRNYEKINKAYEQQFDNMQRMNQRWLDLFSKSWEQHQNEKPKAES*
AF_2010_repII_A1DRAFT_100774182	3300000597	Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERINELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKSWEQHQ
AF_2010_repII_A100DRAFT_10426122	3300000655	Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVMNLERINYLYNESIKSIERVNELYDTFIRNYEKINRAYEQQLDNMQRMNQKWLDLFSKSWEHHQN
JGI11643J11755_116895043	3300000787	Soil	MMTWFDTYNEYIKNFEKIIQLQQDYIRNLEQISHLYNEFINNIERVNKIYNEFIVSYEKFGLLYKQQFQNMQRMNQKWLDLFSKPWEQXQNEKXTD*
JGI11643J11755_117811872	3300000787	Soil	MTWFDIYNEFSKNFEKINQLQKDYVINXERINYLYNESIKSIERVNELYNAHIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKSWDQXQXEKH*
JGI11643J11755_117925001	3300000787	Soil	WFDIYNEFIKNFEKINQLQKDYIRNLERINYLYNESIKSIDRVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWLDLFSKSWDQXQNXNEKR*
AF_2010_repII_A001DRAFT_100052206	3300000793	Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINHLYNESIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKTWEQHQNEKP*
AF_2010_repII_A001DRAFT_101159772	3300000793	Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVMNLERINYLYNESIKSIERVNELYDTFIRNYEKINRAYEQQLDNMQRMNQKWLDLFSKS*
JGI11615J12901_102547973	3300000953	Soil	MTWFDTYNEYIKNFEKIIQLQQDYIRNLEQISHLYNEFINNIERVNKIYNEFIVSYEKFGLLYKQQFQNMQRMNQKWLDLFSKPW*
JGI11615J12901_109487613	3300000953	Soil	MTWFDIYNEFIKNFEKINQLQKDYIRNLERINYLYNESIKSIDRVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWLDLFSKSWDQQQTEKH*
JGI24809J26612_10005575	3300002100	Soil	VTSYSTMTWFDIYNEFSKNFEKINQLQKDYVINLERINYLYNESIKSIERVNELYNAHIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKSWDQHQNEKP*
Ga0062593_1000785643	3300004114	Soil	MTWFDVYNEFIKNFDKVNRLQKDYIINLERINYLYNESIKSIERVNNLYSEHIKNYEKMNSAYEQQFDNMQRMNQKWFDLFSKSWDRQQTEKR*
Ga0062593_1001232352	3300004114	Soil	MTWFDIYNEFIKNFEKINQLQKDYIRNLERINYLYNESIKSIDRVNNLYNEYIKNYEKMNRAYEQQFDNIQRMNQKWLDLFSKSWDQQQTEKH*
Ga0062593_1006326901	3300004114	Soil	MMTWFDIYNEFIKNFEKVNQLQKDYIRNLERINYLYNESIKSIERVNDLYNAYIRNYEKMNRSYEQQFDNMQRMNQKWLDIFSKSSELDQNEKR*
Ga0062589_1000624951	3300004156	Soil	MTWFDIYNEFIRNFDKISQLQQDYIRNLERINHLYDESIKSMERVNELYNKFVDSYDKMNRLYDQQFDSMQRMNQKWLDVFSKSWEQQ
Ga0062589_1026143071	3300004156	Soil	FDIYNEFIKNFEKINQLQKDYIRNLERINYLYNESIKSIDRVNNLYNEYIKNYEKMNRAYEQQFDNIQRMNQKWLDLFSKSWDQQQTEKH*
Ga0062595_1000327192	3300004479	Soil	MMTWFDIYNEFIKNFEKVNQLQKDYIRNLERINYLYDESIKSIERVNDLYNAYIRNYEKMNRSYEQQFDNMRRMNQKWLDIFSKSSEQDQNEKR*
Ga0062595_1000814504	3300004479	Soil	MVHVYEFIKNFERITQLQKDYIENLERMNYFYNESIKTIERVNDLYNAFIRNYEKMNTLYEQQFDNIKRMNQKWFDVFSEASEQKQNEKP
Ga0066675_105963211	3300005187	Soil	MTWFDIYTEFLKNFEKISQLQQDYIRNLERINKLYDESIKRIERVNEIYNKFIGSYDKMATLYEQQFDNIQRMNQKWYDVLSKEQHQNERSK*
Ga0066388_1021361133	3300005332	Tropical Forest Soil	MTWFELYNEFIKNLEKVNQLQRDFITNLERINYLYNESIKSIEKVNDLYNQSIRNYEKMNTSYEQQFENMQRMNQKWFDVFSKSWGQQQNEKR*
Ga0066388_1023769902	3300005332	Tropical Forest Soil	TQLQKDYVTNLERINYLYNESIKNIERVNVLYDTFIRNCEKINRAYEQQFDNMQRMNQKWLDLFSKSWEQHQNEKR*
Ga0066388_1060629081	3300005332	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLD
Ga0066697_104812212	3300005540	Soil	MTWFDIYNEFIKNFEKVNQLQKDYVINLEQINYLYNESIKSIERVNELYNAYIRNYEKMNRSYEQQFDNMQRMNQKWLDIFSKSWEQHQNEKH*
Ga0066903_1055751633	3300005764	Tropical Forest Soil	MTWFDIYNEFIKNLEKVIHLQKDYVRNLERINHLYNESIKNIERVNDLHNAFIRNYEKVNEVYEQQFDNMQRMNQKWLNLFSKSWEQHHNEKR*
Ga0066903_1073015631	3300005764	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKIIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKSWEQHQNEKR*
Ga0075428_1026609662	3300006844	Populus Rhizosphere	MTWFDTYNEFIKNFEKISQLQKDYVINLERINHLYNESIKSIEKVNNLYNEYIRNYEKMNRAYEQQFDNMQKMNQKWLDLFSTSWDQRQAEKR*
Ga0075421_1002078182	3300006845	Populus Rhizosphere	MSAWWFYTYNEYVKNFEKIIQLQQDYIRNLEHISHLYNEFIKNIERVNELYNKSISSFEKLGSLYEQQFQNMQRMNQKWLDLFSKPWEQYQSEKHT*
Ga0075421_1002957103	3300006845	Populus Rhizosphere	MSWFDTYNEFIKNFEKITQLQKDYVINLERINYLYNESIKSIERVNDLYNEFIRKYEKMNRAYEQQFDNMQKMNQKWLDLFSKSWDQQQTEKR*
Ga0075421_1010801752	3300006845	Populus Rhizosphere	MTWFDTYNEFIKNFEKIIQLQKDYVENLERINYLYNEFIKSIERVNDLYNAFIRNYEKMNTLYEQQFDNMQKMNQKWFDVFSKAWEQKQNEKP*
Ga0075431_1005290443	3300006847	Populus Rhizosphere	MTWFDTYNEFIKNFEKINQLQKDYVINLERINYLYNESIKSIERVNNLYNEYIRNYEKMNRAYEQQFDNMQKMNQKWLDLFSTSWDQRQAGKR*
Ga0075431_1018530241	3300006847	Populus Rhizosphere	MTWFDTYNEFIKNFEKITQLQKDYVENLERINYLYNEFIKSIERVNDLYNAFIRNYEKMNTLYEQQFDNMQKMNQKWFDVFSKAWEQKQNEKP*
Ga0075433_113284151	3300006852	Populus Rhizosphere	MTWFDVYNEFIKNFDKVNRLQKDHIINLERINYLYNESIKSIERVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWFDLFSKSWDQPQTEKR*
Ga0075425_1001871655	3300006854	Populus Rhizosphere	MMTWFDTYNEYIKNFEKIIQLQQDYIRNLERISHLYNEFIKNVERINGIYNEFIVSYKKLSSLYEQQFQNMQRMNQRWLNLFSKPWEQNQSEKYKD*
Ga0075425_1006324932	3300006854	Populus Rhizosphere	MTWFDIYNEFIKNFEKINQLQKDYIINLERINYLYNESIKSIERVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWFDLFSKSWDRQQTEKR*
Ga0075434_1000631553	3300006871	Populus Rhizosphere	MMTWFDTYNEYIKNFEKIIQLQQDYIRNLERISHLYNEFIKNIERVNEIYNEFIVSYKKLSSLYEQQFQNMQRMNQRWLNLFSKPWEQNQSEKYKD*
Ga0075434_1006306662	3300006871	Populus Rhizosphere	VTLYSTMTWFDIYNEFIKNFEKINQLQKDYIINLERINYLYNESIKSIERVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWFDLFSKSWDRQQTEKR*
Ga0075436_1006636821	3300006914	Populus Rhizosphere	YDSIDNYNRSHYTYMMTWFDTYNEYIKNFEKIIQLQQDYIRNLERISHLYNEFIKNIERVNEIYNEFIVSYKKLSSLYEQQFQNMQRMNQRWLNLFSKPWEQNQSEKYKD*
Ga0075436_1010359842	3300006914	Populus Rhizosphere	MTWFDIYNEFIKNFEKINQLQKDYIINLERINYLYNESIKSIERVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWFDLFSKSWNQQQAEKR*
Ga0079219_115333341	3300006954	Agricultural Soil	MTWFDIYNEFIKNFEKINQLQKDYVINLERINYLYNESIKSIERVNNLYNESIRSYEKMNRAYEQQFDNMQRMNQKWLDLFSKSWDPQQTEKR*
Ga0075435_1002153523	3300007076	Populus Rhizosphere	MMTWFDTYNEYIKNFEKVIQLQQDYIRNLERISHLYNEFIKNIERVNEIYNEFIVSYKKLSSLYEQQFQNMQRMNQRWLNLFSKPWEQNQSEKYKD*
Ga0075435_1006734753	3300007076	Populus Rhizosphere	MTWFDIYNEFIKNFEKINQLQKDYIINLERINYLYNESIKSIERVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWFDLFS
Ga0114129_111522712	3300009147	Populus Rhizosphere	MTWFDTYNEFIKNFEKISQLQKDYLINLERINYLYNESIKSIERVNNLYNEYIGNYEKMNRAYEHQFDNMQKMNQKWLDLFSTSWDQRQAEKR*
Ga0114129_125544641	3300009147	Populus Rhizosphere	VPHYTPVMTWWFDTYNEYIKNFEKIIQLQQDYIRNLEQIIHLYNKFINNIERLNELHNEFIANYEKWGSLYEQQFQNMQRMNKKWLDLFSKSWEPYQSEKHTE*
Ga0126315_106102702	3300010038	Serpentine Soil	MMTWFDIYNEFIKNFEKISQLQKDYIINLERINYLYNESFKSIERVNNLYNEHIKNYEKMYTAYEQQFDNMQRMNQKWFDLFSKSWDQQQTEKR*
Ga0126308_108185961	3300010040	Serpentine Soil	MTWFDIYNEFIKNFEKVNQLQKDYVRNLEQINHLYNESIKSIERVNDLYNAYIRNYEKMNRSYEQQFDNMQRINQKWLIYFQNHGISNKLKNVDT*
Ga0126314_100024438	3300010042	Serpentine Soil	MISRTDKYNERNHYDMMTWFDIYNEFIKKFEKIDQLQKDYIVNLERLNSLYSESIKNLERVNNLYNEYIKIHERMDRSYEQHFDYMQKMNQKWFDVFSKSLEQNQNEKR*
Ga0126314_100544272	3300010042	Serpentine Soil	MTINHLQQDYIRNLEQISHLYNEFIKKIERVNELYNNSIASYEIFGLLYEQQFQNMQRMNHNWLDLFSKPWEQL*
Ga0126310_100158901	3300010044	Serpentine Soil	MTINHLQQDYIRNLEQISHLYNEFIKKIERVNELYNNSIASYEKFGLLYEQQFQNMQRMNHNWLDLFSKPWEQLQNKKQTD*
Ga0126311_102818582	3300010045	Serpentine Soil	YTTWFDIYNEFIKNFEKISQLQKDYIINLERINYLYNESFKSIERVNNLYNEHIKNYEKMYTAYEQQFDNMQRMNQKWFDLFSKSWDQQQTEKR*
Ga0126384_115323882	3300010046	Tropical Forest Soil	MTWFELYNEFIKNLEKVIQLQKDYVRNLERINYLYNESIKSIERVNDLYNQSITNYEKMNRSYEQQFENMQRMNQKWLDVFSKSWEQKQK*
Ga0126382_104034232	3300010047	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKAWEQHQNEKR*
Ga0126373_104339512	3300010048	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKIIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKYQSGTAPK*
Ga0126373_109873131	3300010048	Tropical Forest Soil	MTWFDTYTEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNELYDTFIRNCEKINRAYEQQFDNMQRMNQKWLDLFSKPWEQ
Ga0126373_112543121	3300010048	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKEYVTNLERINYLYNESIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWHDLFSSHGAAPK*
Ga0126370_100033157	3300010358	Tropical Forest Soil	MMTWFEMYSEFIKNLEKVNQLQRDFITNLERINYLYNESIKSIEKVNDLYNQSIRNYENMNRSYEQHFENMQRMNQKWLDVFSKSWGQQQQNEKH*
Ga0126370_103961281	3300010358	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNVLYDTFIRNCEKINRAYEQQFDNMQRMNQKWLDLFSKSWEQHQNEKR*
Ga0126376_100515763	3300010359	Tropical Forest Soil	MMTWFEMYSEFIKNLEKVNQLQRDFITNLERINYLYNESIKSIEKVNDLYNQSIRNYENMNRSYEQHFENMQRMNQKWLDVFSKSWGQQQNEKR*
Ga0126376_109709881	3300010359	Tropical Forest Soil	MTWFDTYNEFIKNIERVTQLQKDYVTNLERINYLYNESIKNIERVNELYDTLIRNYEKINRAYEQQFDNMQRMNQKWLDLFSK
Ga0126378_103283791	3300010361	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVMNLERINCLYNEAIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKTWEQHQNEKP*
Ga0126377_110075732	3300010362	Tropical Forest Soil	MMTWFEMYSEFIKNLEKVNQLQRDFITNLERINYLYNESIKSIEKVNDLYNQSIRNYENMNRSYEQHFENMQRMNQKWLDVFSKSWGQQQNEKH*
Ga0126377_113814202	3300010362	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKEYVTNLERINYLYNESIKNIERVNELYDTFIRNYEKINRAYEQQFDNMRRMNQRWS*
Ga0126379_111414971	3300010366	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIQRINELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKTWEQHQNEKP*
Ga0126379_118757471	3300010366	Tropical Forest Soil	QLQKDYVTNLERINYLYNESIKNIERVNELYDTFIRNCEKINRAYEKQFDNMQRMNQKWLDLFSKSWEQHQNEKR*
Ga0126381_1008431402	3300010376	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVMNLERINCLYNEAIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSK
Ga0126381_1011257563	3300010376	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRIN
Ga0126381_1013229002	3300010376	Tropical Forest Soil	MTKNVEKVIQLQKDYVKNLERINYLYNESIKNIERVTELHAHSLEIMAAVNQLYEQQFDNMQKMNQKLDLFSKSWEQHQNEKR*
Ga0126381_1019295652	3300010376	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVMNLERINYLYNESIKSIERVNELYDTFIRNYEKINRAYEQQLDNMQRMNQKWLDLFSKSWEHHQNA*
Ga0126381_1028969531	3300010376	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNVLYDTFIRNCEKINRAYEQQFDNMQRMNQKWLDLFSK
Ga0126383_100988515	3300010398	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERINELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKSWEQHQNEKR*
Ga0126383_136044722	3300010398	Tropical Forest Soil	EFIKNLEKVNQLQRDFITNLERINYLYNESIKSIEKVNDLYNQSIRNYENMNRSYEQHFENMQRMNQKWLDVFSKSWGQQQQNEKH*
Ga0153944_10779291	3300012088	Attine Ant Fungus Gardens	MTWFDTYNEFIKNTEKVTQLQKDYVTNLERINYLYNESIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKSREQHQNEKS*
Ga0150985_1171752511	3300012212	Avena Fatua Rhizosphere	YNEFIKNLEKVNQLQRDYITNLERINYLYNESIKSIEMVNDLYNQSIRNYEKMSRSYEQQFENMQRMNQKWLDVFSKSWEQGAK*
Ga0137370_105085862	3300012285	Vadose Zone Soil	VTLYSTMTWFDIYNEFIKNFEKVNQLQKDYVINLERINYLYNESIKSIERVNELYNEYIRNYEKMNRSYEQQFDNMQRMNQKWLDIFSKSWEQHQNEKH*
Ga0150984_1121094584	3300012469	Avena Fatua Rhizosphere	EFIKNLEKVNQLQRDYITNLERINYLYNESIKSIEMVNDLYNQSIRNYEKMSRSYEQQFENMQRMNQKWLDVFSKSWEQGAK*
Ga0153928_10122102	3300012677	Attine Ant Fungus Gardens	MTWFDTYNEFIKNIEKVTQLQKDYVMNLERINRLYNEAIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKTWEQHQNEKP*
Ga0157300_10091853	3300012884	Soil	YDSIDKYNQPHIPMMTWFDTYNEFIKNFMKINQLQQDYIRNLEQISHLYNEFINNIERVNKIYNEFIVSYEKFGLLYKQQFQNMQGMNQKWLDLFSKPW*
Ga0157285_100058593	3300012897	Soil	MMTWFDTYNEYIKNFEKIIQLQQDYIRNLEQISHLYNEFINNIERVNKIYNEFIVSYEKFGLLSKQQFQNMQRMNQKWLDLFSKPWEQLQNEKDTD*
Ga0157288_103250101	3300012901	Soil	MTWFDIYNEFIKNFEKINQLQKDYIRNLERINYLYNESIKSIDRVNNLYNEYIKNYEKMNRAYEQQFDNIQRMNQKWLDLFSKSWDRQQTEKR*
Ga0157286_100152713	3300012908	Soil	MMTWFDTYNEYIKNFEKIIQLQQDYIRNLEQISHLYNEFINNIERVNKIYNEFIVSYEKFGLLSKQQFQNMQGMNQKWLDLFSKPW*
Ga0157286_103977751	3300012908	Soil	DKVNRLQKDYIINLERINYLYNESIKSIERVNNLYSEHIKNYEKMNSAYEQQFDNMQRMNQKWFDLFSKSWDRQQTEKR*
Ga0157301_100374893	3300012911	Soil	MMTWFDTYNEYIKNFEKIIQLQQDYIRNLEQISHLYNEFIKNIERVNELYNKFIASYEKFGLLYEQQFQNMQRMNQKWLDLFSKPWEQLQNEKDTD*
Ga0164298_102288981	3300012955	Soil	MTWFDIYNEFIKNYEKVNQLQKDYIINLERINHLYNESIKSIERVNELYNESIRNYEKMNKVYEQQLDNMQKMNQRWFDIFTKSWGQQQNEKT*
Ga0126369_120504902	3300012971	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLLKDYVTNLERINYLYNESIKNMERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSKPWEQHQNEKR*
Ga0164304_103367231	3300012986	Soil	MTWFDIYNEFIKNYEKMHQLQKDYIINLERINHLYNESIKSIERVNELYNESIRNYEKMNKVYEQQLDNMQKMNQRWFDIFTKSWGQQQNEKT*
Ga0157307_10267482	3300013096	Soil	MTWFDIYNEFIKNFEKINQLQKDYIINLERINYLYNESIKSIDRVNNLYNEYNRNYEKMSRSYEQQFEDMQRMNQRWLDLFSKSWK
Ga0182000_104835761	3300014487	Soil	IKNFEKINQLQKDYVVNLERINYTYNESIKSIERVNNLYNEYIRNYEKMNRAYEQQFDNMQRMNQKWIDLFSKSWDQQQTEKR*
Ga0182001_103535041	3300014488	Soil	MTWFDIYNEFIKKFEKIDQLQKDYIVNLQQLNSLYNESIKNIERVNNLYNEYIKIYERMNRSYEQHFDYMQKMNQKWFEVYSKSSGQNQNEKR*
Ga0182008_100361962	3300014497	Rhizosphere	MTWFDIYNEFIKNFEKISQLQKDYIINLERINYLYNESIKSIERVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWFDLFSKSWDQQQTEKR*
Ga0182008_101265422	3300014497	Rhizosphere	MTWFDTYNEYIKNFEKVIQLQQDYIRNLERISHLYNEFIKNIERVNEIYNEFIVSYKKLSSLYEQQFQNMQRMNQRWLNLFSKPWEQNQSEKYKD*
Ga0182008_106586381	3300014497	Rhizosphere	DKYNERHHCDRMTWFDIYNEFIKKFEKIDQLQKDYILNLQQLNSLYNESIKNIERVNNLYNEYIKMYERMNRSYEQHFDYMQKMNQKWFEVFSKSSGQNQNEKR*
Ga0173483_100683471	3300015077	Soil	MTWFDIYNEFIRNFDKISQLQQDYIRNLERINHLYDESIKSMERVNELYNKFVDSYDKMNRLYDQQFDSMQRMNQKWLDV
Ga0173483_100683961	3300015077	Soil	MTWFDIYNEFIKNFEKINQLQKDYIRNLERINYLYNESIKSIDRVNNLYNEYIKNYEKMNRAYEQQFDNMQRMNQKWFDLFSKSWDRQQTEKR*
Ga0173483_106667941	3300015077	Soil	MMTWFDTYNEYIKNFEKIIQLQQDYIRNLEQISHLYNEFINNIERVNKIYNEFIVSYEKFGLLYKQQFQNMQGMNQKWLDLFSKPW*
Ga0173483_109012141	3300015077	Soil	MTWFDIYNEFIRNFDKISQLQQDYIRNLERINHLYDESIKSMERVNELYNKFIDSYNKTNRLYDQQFDSMQRMNQKWLDV
Ga0132258_123622961	3300015371	Arabidopsis Rhizosphere	MTWFDAYNEFIKNYEKITHLQKDYVINLERINHLYNESIKSIERVNSLYNEHIRNYEKMNRAYEQQFENMQKMNQKWLDLFSKSWDQQQTEKG*
Ga0182040_108859161	3300016387	Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNELFDTFITNYEKINRAYEQQFDNMQRMNQKWLDLFSKSWEQHQNEKR
Ga0187777_104805071	3300017974	Tropical Peatland	MAWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNELYDTFIRNYEKMNRAYEQQFDNMQRMNQKWLDLFSKSSKRHQDEKP
Ga0187772_115092641	3300018085	Tropical Peatland	DIYNEFIKNLEKVTQLQKDYVRNLERINYLYNESIKNIERVNELYDAFIRNYEKVNEVYQQQFDNMQRMNQKWLDLFKAWEQHQNEKR
Ga0173481_100039214	3300019356	Soil	MMTWFDTYNEYIKNFEKIIQLQQDYIRNLEQISHLYNEFINNIERVNKIYNEFIVSYEKFGLLSKQQFQNMQRMNQKWLDLFSKPWEQLQNEKDTD
Ga0173481_100185011	3300019356	Soil	MTWFDIYNEFIKNFEKINQLQKDYIRNLERINYLYNESIKSIDRVNNLYNEYIKNYEKMNRAYEQQFDNIQRMNQKWLDLFSKSWDQQQTEKH
Ga0173481_100279793	3300019356	Soil	MMTWFDIYNEFIKNFEKVNQLQKDYIRNLERINYLYNESIKSIERVNDLYNAYIRNYEKMNRSYEQQFDNMQRMNQKWLDIFSKSSELDQNEKR
Ga0173481_104614811	3300019356	Soil	MTWFDVYNEFIKNFDKVNRLQKDYIINLERINYLYNESIKSIERVNNLYSEHIKNYEKMNSAYEQQFDNMQRMNQKWLDLFSKSWDRQQTEKR
Ga0126371_101779442	3300021560	Tropical Forest Soil	MTWFDTYNEFIKNIERVTQLQKDYVTNLERINYLYNESIKNIERVNELYDTLIRNYEKINRAYEQQFDNMQRMNQREKQRMNAET
Ga0126371_104519422	3300021560	Tropical Forest Soil	MTWFDIYNEFIKNLEKVIHLQKDYVRNLERINHLYNESNKNIERVNELHNAFIRNYEKVNEVYEQQFDNMQRMNQKWLDLYRERNEILAWEGVAIYSRT
Ga0126371_104830931	3300021560	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKEYVTNLERINYLYNESIKNIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQKWLDLFSK
Ga0126371_113981492	3300021560	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVKNLERINYLYNESIKIIERVNELYDTFIRNYEKINRAYEQQFDNMQRMNQ
Ga0126371_125493641	3300021560	Tropical Forest Soil	MTWFDTYNEFIKNIEKVTQLQKDYVTNLERINYLYNESIKNIERVNVLYDTFIRNCEKINRAYEQQFDNMQRMNQKWLD
Ga0209382_102752241	3300027909	Populus Rhizosphere	MTWFDTYNEFIKNFEKISQLQKDYVINLERINHLYNESIKSIEKVNNLYNEYIRNYEKMNRAYEQQFDNMQKMNQKWLDLFSTSWDQRQAGKR
Ga0209382_103980462	3300027909	Populus Rhizosphere	MSAWWFYTYNEYVKNFEKIIQLQQDYIRNLEHISHLYNEFIKNIERVNELYNKSISSFEKLGSLYEQQFQNMQRMNQKWLDLFSKPWEQYQSEKHT
Ga0209382_105488651	3300027909	Populus Rhizosphere	MTWWFDTYNEYIKNFEKIIQLQQDYIRNLEQIIHLYNKFINNIERLNELHNEFIANYEKWGSLYEQQFQNMQRMNKKWLDLFSKSWEPYQSEKHTE
Ga0209382_106771081	3300027909	Populus Rhizosphere	MSWFDTYNEFIKNFEKITQLQKDYVINLERINYLYNESIKSIERVNDLYNEFIRNYEKMNRAYEQQFDNMQKMNQKWLDLFSKSWDQQQTEKR
Ga0209382_108267411	3300027909	Populus Rhizosphere	MTWFDTYNEFIKNFEKIIQLQKDYVENLERINYLYNEFIKSIERVNDLYNAFIRNYEKMNTLYEQQFDNMQKMNQKWFDVFSKAWEQKQNEKP
Ga0247750_10372081	3300027992	Soil	LHYCQMTWFDIYNEFIRNFDRISQLQQDYIRNLERINHLYDESIKSMERVNELYNKFVDSYDKMNRLYDQQFDSMQRMNQKWLDVFSKSWEQ
Ga0307276_101825301	3300028705	Soil	MTWFDAYNEFIKNFEKISQLQKDYIINLERINYLYNESIKSIERVNNLYNEHIKNYEKMNRAYEQQFDNMQRMNQKWFDLFSKSWDQQQTEKR
Ga0308176_102598622	3300031996	Soil	MTWFDIYNEFIKNFEKVNQLQKDYIRNLERINYLYNESIKSIERVNDLYNAYIRNYEKMNRSYEQQFDNMQRMNQKWLDIFSKSSEQDQNEKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075812

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences