Metagenome / Metatranscriptome Family F075773

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075773
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	52 residues
Representative Sequence	ILYARGDYYTDGYWNKKIDLSTLNVSQTLAANAARNVKFVLPASPNEVITRP
Number of Associated Samples	89
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	91.53 %
% of genes from short scaffolds (< 2000 bps)	79.66 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.051 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (16.949 % of family members)
Environment Ontology (ENVO)	Unclassified (29.661 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.169 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.50% β-sheet: 17.50% Coil/Unstructured: 70.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00521	DNA_topoisoIV	26.27
PF13564	DoxX_2	4.24
PF03989	DNA_gyraseA_C	4.24
PF08238	Sel1	3.39
PF00445	Ribonuclease_T2	1.69
PF00326	Peptidase_S9	1.69
PF12833	HTH_18	1.69
PF01432	Peptidase_M3	0.85
PF12850	Metallophos_2	0.85
PF13964	Kelch_6	0.85
PF01757	Acyl_transf_3	0.85
PF01381	HTH_3	0.85
PF01833	TIG	0.85
PF06821	Ser_hydrolase	0.85
PF02311	AraC_binding	0.85
PF03544	TonB_C	0.85
PF00383	dCMP_cyt_deam_1	0.85
PF00903	Glyoxalase	0.85
PF12158	DUF3592	0.85
PF06736	TMEM175	0.85
PF03437	BtpA	0.85
PF05368	NmrA	0.85
PF13561	adh_short_C2	0.85
PF00106	adh_short	0.85
PF01790	LGT	0.85
PF09957	VapB_antitoxin	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	30.51
COG3719	Ribonuclease I	Translation, ribosomal structure and biogenesis [J]	1.69
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0434	Membrane biogenesis protein, BtpA/SgcQ family	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.85
COG3545	Predicted esterase of the alpha/beta hydrolase fold	General function prediction only [R]	0.85
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.05 %
Unclassified	root	N/A	16.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.05 %
Unclassified	root	N/A	16.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.05 %
Unclassified	root	N/A	16.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.75 %
Unclassified	root	N/A	16.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.73 %
Unclassified	root	N/A	16.95 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.54 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.73 %
Unclassified	root	N/A	16.95 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.69 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.73 %
Unclassified	root	N/A	16.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.85 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.73 %
Unclassified	root	N/A	16.95 %
Candidatus Accumulibacter adjunctus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	0.85 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001087\|JGI12677J13195_1014033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300002245\|JGIcombinedJ26739_100678762	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300004080\|Ga0062385_10462541	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300004080\|Ga0062385_10634936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300004080\|Ga0062385_10748274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300004080\|Ga0062385_10897283	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300004080\|Ga0062385_11036729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300004082\|Ga0062384_100944815	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300004082\|Ga0062384_101155325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300004082\|Ga0062384_101189252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300004091\|Ga0062387_100224001	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300004091\|Ga0062387_101714078	Not Available	510	Open in IMG/M
3300004092\|Ga0062389_102228131	Not Available	721	Open in IMG/M
3300004092\|Ga0062389_103012578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300004092\|Ga0062389_103307188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300004092\|Ga0062389_103874584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300004152\|Ga0062386_100207041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1545	Open in IMG/M
3300004635\|Ga0062388_100727671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter adjunctus	930	Open in IMG/M
3300005538\|Ga0070731_10701225	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300005610\|Ga0070763_10258792	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005712\|Ga0070764_10384091	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300005921\|Ga0070766_10014246	All Organisms → cellular organisms → Bacteria	4134	Open in IMG/M
3300005921\|Ga0070766_10674987	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300006893\|Ga0073928_10732273	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300009520\|Ga0116214_1348062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300009623\|Ga0116133_1007562	All Organisms → cellular organisms → Bacteria	2711	Open in IMG/M
3300009623\|Ga0116133_1031982	All Organisms → cellular organisms → Bacteria → Acidobacteria	1301	Open in IMG/M
3300009624\|Ga0116105_1128813	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009635\|Ga0116117_1119939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300009641\|Ga0116120_1078550	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300009824\|Ga0116219_10447858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300009839\|Ga0116223_10588742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300011120\|Ga0150983_15259071	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300012582\|Ga0137358_10805180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300012925\|Ga0137419_10456534	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300014168\|Ga0181534_10121021	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300014169\|Ga0181531_10233758	All Organisms → cellular organisms → Bacteria → Acidobacteria	1120	Open in IMG/M
3300014169\|Ga0181531_10729072	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300014489\|Ga0182018_10202910	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300014495\|Ga0182015_10109091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1913	Open in IMG/M
3300014654\|Ga0181525_10593142	Not Available	617	Open in IMG/M
3300015242\|Ga0137412_11144445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300017935\|Ga0187848_10044974	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300017941\|Ga0187850_10309263	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300017975\|Ga0187782_10635311	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300018035\|Ga0187875_10307438	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300018037\|Ga0187883_10114245	All Organisms → cellular organisms → Bacteria → Acidobacteria	1398	Open in IMG/M
3300018043\|Ga0187887_10660846	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300019284\|Ga0187797_1401039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300019786\|Ga0182025_1221738	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300020580\|Ga0210403_10588645	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300020583\|Ga0210401_10230251	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300021180\|Ga0210396_10367899	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300021401\|Ga0210393_10331714	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300021407\|Ga0210383_11429333	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300021420\|Ga0210394_10386870	Not Available	1230	Open in IMG/M
3300021432\|Ga0210384_10948182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	762	Open in IMG/M
3300021433\|Ga0210391_10033597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4114	Open in IMG/M
3300021478\|Ga0210402_11453631	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300021478\|Ga0210402_11757391	Not Available	546	Open in IMG/M
3300022881\|Ga0224545_1050782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300025320\|Ga0209171_10525714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300025414\|Ga0208935_1007636	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300026514\|Ga0257168_1039980	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300027089\|Ga0207943_112614	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300027376\|Ga0209004_1053179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300027609\|Ga0209221_1006678	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300027635\|Ga0209625_1057746	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300027667\|Ga0209009_1114522	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300027783\|Ga0209448_10155189	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300027783\|Ga0209448_10250810	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300027825\|Ga0209039_10123043	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300027853\|Ga0209274_10028300	All Organisms → cellular organisms → Bacteria → Acidobacteria	2584	Open in IMG/M
3300027908\|Ga0209006_10936633	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300028775\|Ga0302231_10019582	All Organisms → cellular organisms → Bacteria	2976	Open in IMG/M
3300028801\|Ga0302226_10107538	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300028879\|Ga0302229_10222244	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300029911\|Ga0311361_11190989	Not Available	611	Open in IMG/M
3300029911\|Ga0311361_11336096	Not Available	557	Open in IMG/M
3300029913\|Ga0311362_10052935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6093	Open in IMG/M
3300029914\|Ga0311359_10012905	All Organisms → cellular organisms → Bacteria	10936	Open in IMG/M
3300029952\|Ga0311346_10801572	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300030007\|Ga0311338_10331841	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300030041\|Ga0302274_10162102	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300030706\|Ga0310039_10231637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300031231\|Ga0170824_118060358	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031236\|Ga0302324_102043217	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300031525\|Ga0302326_10880954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300031708\|Ga0310686_101841215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1681	Open in IMG/M
3300031708\|Ga0310686_107763462	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300031708\|Ga0310686_109648792	Not Available	685	Open in IMG/M
3300031708\|Ga0310686_115540682	Not Available	560	Open in IMG/M
3300031715\|Ga0307476_10032860	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300031715\|Ga0307476_10082505	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300031715\|Ga0307476_10255117	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300031715\|Ga0307476_10568401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300031715\|Ga0307476_11277063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300031718\|Ga0307474_11581045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300031753\|Ga0307477_10700008	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300031754\|Ga0307475_10183712	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300031823\|Ga0307478_10373637	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300031962\|Ga0307479_11544080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300032828\|Ga0335080_10075391	All Organisms → cellular organisms → Bacteria	3741	Open in IMG/M
3300032828\|Ga0335080_10604116	Not Available	1153	Open in IMG/M
3300032897\|Ga0335071_10022392	All Organisms → cellular organisms → Bacteria	6334	Open in IMG/M
3300033829\|Ga0334854_008924	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300034124\|Ga0370483_0040358	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300034163\|Ga0370515_0179136	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.80%
Aquatic	Environmental → Aquatic	32.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.39%
Freshwater	Environmental → Aquatic → Freshwater	30.51%
Peat	Environmental → Terrestrial → Peat	14.41%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	30.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.41%
Loam	Environmental → Terrestrial → Soil → Loam	13.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.47%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.69%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.54%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.69%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	16.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.47%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.08%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.08%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.39%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.54%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.69%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.69%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001087	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027089	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF015 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12677J13195_10140331	3300001087	Forest Soil	IADGMLYARGDYYTDGYWNKKIDLATLNVAETIEANASRSVKFTLPSSPNEVITRP*
JGIcombinedJ26739_1006787621	3300002245	Forest Soil	GILYARGDYYTDGYWSKKIDLSTLNVSQTLAANAARNVKFVLPASPNEVITRP*
Ga0062385_104625411	3300004080	Bog Forest Soil	VRDYTIADGILYARGDYYTEGYWNKKIDLSTVNVARTLGANAVRNVKFVLPSSPNEVITRP*
Ga0062385_106349361	3300004080	Bog Forest Soil	TIADGILYARGDYYTDGYWTKKIALSTLNIPQTLEANTNRNVNFILPKSPNEIITRP*
Ga0062385_107482741	3300004080	Bog Forest Soil	TIADGILYARGDYYTDGYWNKKIELSTLNVAQTLQANMTRSVKFVLPASPNEVITRP*
Ga0062385_108972831	3300004080	Bog Forest Soil	DGYWNKKIDLASLNISETLQANNKRNVKFILPSSPNEVITRP*
Ga0062385_110367291	3300004080	Bog Forest Soil	TIADGILYARGDYYTDGYWTKKIALSTLSVSQTLEANAQRNVKFILPKSPNEVITRP*
Ga0062384_1009448152	3300004082	Bog Forest Soil	DGYWNKKIALASLNVSQTLQANNDRNVKFVLPSSPNEVITRP*
Ga0062384_1011553251	3300004082	Bog Forest Soil	RDYTIADGILYARGDYYTDGYWTKKIALSTLSVSQTLEANAQRNVKFILPKSPNEVITRP
Ga0062384_1011892522	3300004082	Bog Forest Soil	YTIADGILYASVDYYTDGYWTKKIDLSTVNVAQTLEANTQRNVKFVLPKSPNEVITRP*
Ga0062387_1002240011	3300004091	Bog Forest Soil	WTKKIELSALNVSQTLEANMTRSVKFVLPASPNEVITRP*
Ga0062387_1017140781	3300004091	Bog Forest Soil	DGYWNKKIALAALNIPETLQANATRNVKFVLPASPNEVITRP*
Ga0062389_1022281313	3300004092	Bog Forest Soil	GVLYARGDYYTDGYWNKKIALSTLNVAETLEANTTRQVKFVLPTSPNEEITRP*
Ga0062389_1030125782	3300004092	Bog Forest Soil	YTIADGVLYARGDYYTDGYWNRKIELSALNVAQTLEANTTRNVKFILPASPNEVITRP*
Ga0062389_1033071882	3300004092	Bog Forest Soil	GVLYARGDYYTDGYWNKKIELSTLNVAQTLQANMTRSVKFVLPASPNEVITRP*
Ga0062389_1038745841	3300004092	Bog Forest Soil	ADGILYARGDYYTDGYWNKKIALATLNVSETLEANNQRNIKFTLPTSPNEVITRP*
Ga0062386_1002070411	3300004152	Bog Forest Soil	YARGDYYTDGYWNKKIALSTVNISQTMQANTARNVNFVLPSSPNEVITRP*
Ga0062388_1007276711	3300004635	Bog Forest Soil	DGYWNKTIALANLDIPATLSANNSRGVKFVLPASPNEVITRP*
Ga0070731_107012252	3300005538	Surface Soil	LYARGDYYTDGYWNKKINLAALNLPETLEANNQRNVKFVLPSSPNEVITRP*
Ga0070762_106232272	3300005602	Soil	RDGHSEEVRDYAIADGVLYARGDYYTDGYWNKKIALSTLNVAETLAANTTRQVKFVLPTSPNEVITRP*
Ga0070763_102587922	3300005610	Soil	LYARGNYYTDGYWQKKIALSTLNVPQTLEANAKHSIKFILPTSPNEVITRP*
Ga0070764_103840912	3300005712	Soil	DGYWNKKIDLATLNVAETMQANASRSVKFTLPSSPNEVITRP*
Ga0070766_100142464	3300005921	Soil	YYADGYWTRKIELSTLNLTQTLEANTARNIKFVLPTSPNQVITRP*
Ga0070766_106749871	3300005921	Soil	YYTDGYWNKKINLSTLNVAQTLQANNQRNVKFVLPSSPNEVITRP*
Ga0073928_107322731	3300006893	Iron-Sulfur Acid Spring	WNKKIELSTLNVTQTLEANATRKVKFILPTSPNEVITRP*
Ga0116214_13480622	3300009520	Peatlands Soil	GMLYVRGDYYTDGYWNKKIELSSLNVSQTQKANASRNVRFVLPSSPNEVITRP*
Ga0116133_10075624	3300009623	Peatland	DYYTDGYWNKKIDLAALNVPQTLQANADRSVKFVLPSSPNEVITRP*
Ga0116133_10319821	3300009623	Peatland	EVRDYTIADGILYARGDYYTDGYWNKKISLSTLNVAQTLQANNARNVNFVLPSSPNEVITRP*
Ga0116105_11288132	3300009624	Peatland	DLAALNVPQTLQANADRSVKFVLPSSPNEVITRP*
Ga0116117_11199391	3300009635	Peatland	HSEEVRDYTIADGILYARGDYYTDGYWNKTIALSTLNLAQTLEANATRPVKFILPSSPNEVITRP*
Ga0116120_10785501	3300009641	Peatland	FLYARGDFYTDGYWNKKIDLSTLNLNQTLQANADRSVNFVLPSAPNEVITRP*
Ga0116101_11136461	3300009759	Peatland	SEQVRDYSIAQGTLYARGNYYTDGYWNKKIDLATLNVADTLQANSAHNVNFVLPSSPNEVITRP*
Ga0116219_104478581	3300009824	Peatlands Soil	VRDYAIADGMLYVRGDYYTDGYWNKKIELSSLNVSQTQKANASRNVRFVLPSSPNEVITRP*
Ga0116223_105887422	3300009839	Peatlands Soil	RGDYYTDGYWNKKIELSSLNVSQTQKANASRNVRFVLPSSPNEVITRP*
Ga0150983_152590712	3300011120	Forest Soil	DGYWNKKIDLATLNVGQTLQANADRNVKFVLPSAPNEVITRP*
Ga0137358_108051802	3300012582	Vadose Zone Soil	YTIADGFLYARGDYYIDGYWNKKIDLSTLDLPRTLQGNAARNVKFILPSSPNEVITRP*
Ga0137419_104565342	3300012925	Vadose Zone Soil	ISLSALNIAETLRANAGRNVKFALPSSPNEVITRP*
Ga0181534_101210212	3300014168	Bog	FLYARGDYYTDGYWNKKIDLATLNIPQTLQANGERHVNFVLPSSPNEVITRP*
Ga0181531_102337582	3300014169	Bog	GNYYTDGYWNKKIDLATLNVADTLQANSAHNVNFVLPSSPNEVITRP*
Ga0181531_107290721	3300014169	Bog	DGYWNKKIALSTLNVPQTLEANAQRNVKFVLPKSPNEVITRP*
Ga0182018_102029101	3300014489	Palsa	SEEVRDYAIADGVLYARGDYYTDGYWNKKIALSTLNVAETLEANTTRQVKFVLPTSPNEVITRP*
Ga0182015_101090913	3300014495	Palsa	GILYARGDYYTDGYWTRKIELSTLNLPQTLEANTARNVRFILPASPNQVITRP*
Ga0181525_105931421	3300014654	Bog	YYTDGYWNKKIALSTLNVPQTLEANAQRNVKFVLPKSPNELITRP*
Ga0137412_111444452	3300015242	Vadose Zone Soil	VHDYTIADGFLYARGDYYTDGYWNKKIDLSTLDLPRTLQGNAARNVKFILPSSPNEVITRP*
Ga0187848_100449741	3300017935	Peatland	GILYARGDYYTDGYWNKTIALSTLNLAQTLEANATRPVKFILPSSPNEVITRP
Ga0187850_103092631	3300017941	Peatland	DYTIADGILYARGDYYTDGYWNKTIALSTLNLAQTLEANATRPVKFILPSSPNEVITRP
Ga0187782_106353111	3300017975	Tropical Peatland	KKIDLANLDVAATLNANESRNVSFVLPSSPNQVITRP
Ga0187875_103074382	3300018035	Peatland	YYTDGYWNKKIDLAALNVPQTLQANADRSVKFVLPSSPNEVITRP
Ga0187883_101142454	3300018037	Peatland	EEVRDYTIADGILYARGDYYTDGYWNKKISLSTLNVAQTLQANNARNVNFVLPSSPNEVITRP
Ga0187887_106608461	3300018043	Peatland	KKIDLASLNVAETMQANASRNVKFILPSSPNEVITRP
Ga0187797_14010392	3300019284	Peatland	GDYYTDGYWNKKIELSTLNITETLQANTTRNVKFILPASPNEVITRP
Ga0182025_12217384	3300019786	Permafrost	FYTDGYWNKKIDLSTLNLSQTLQANADRSVNFVLPSAPNEVITRP
Ga0210403_105886452	3300020580	Soil	YYTDGYWSKKIDLSTLNVSQTLAANAARNVKFVLPASPNEVITRP
Ga0210401_102302511	3300020583	Soil	ARGDYYTDGYWNKKIDLATLDVAQTLQANAMHNVKFVLPSSPNEVITRP
Ga0210396_103678992	3300021180	Soil	DGVLYARGDYYTDGYWNKKIALATLNIPQTLEANGTRNVNFVLPASPNEVITRP
Ga0210393_103317141	3300021401	Soil	EVHDYSIANGSLYARGDFYTDGYWNKKIDLANLDVAQTQQANLDRNVKFVLPASPNEVITRP
Ga0210383_114293331	3300021407	Soil	ILYARGDYYTDGYWNKKIDLSTLNVSQTLAANAARNVKFVLPASPNEVITRP
Ga0210394_103868701	3300021420	Soil	KKIDLSTLNVSQTLAANAARNVKFVLPSSPNEVITRP
Ga0210384_109481821	3300021432	Soil	GHSEEVRDYTIADGILYARGDYYADGYWNKKIALSTLDVAQTVQANTARNVNFVLPSSPNEVITRP
Ga0210391_100335971	3300021433	Soil	KKIDLSTLNVSQTLAANAARNVKFVLPASPNEVITRP
Ga0210402_114536312	3300021478	Soil	RDYAIADGTLYARGDYYTDGYWNKKINLSKLNLAQTLQANNQRNVKFVLPSSPNEVITRP
Ga0210402_117573912	3300021478	Soil	DGYWNKKIDLASLDLNQTQQANANRNVKFVLPASPNEVITRF
Ga0224545_10507822	3300022881	Soil	GDFYTDGYWNKKIDLSTLDVTRTEQANAARNVNFILPSSPNEVITRP
Ga0209171_105257142	3300025320	Iron-Sulfur Acid Spring	MLYARGDYYTDGYWNKKIDLATLNVAETMQANASRSVKFTLPSSPNEVITRP
Ga0208935_10076361	3300025414	Peatland	GYWNKKISLSTLNVAQTLQANNARNVNFVLPSSPNEVITRP
Ga0257168_10399802	3300026514	Soil	FLYARGDYYTDGYWNRKIDLSTLDLSQTLQTNSTRNVKFVLPSSPNEVITRP
Ga0207943_1126142	3300027089	Forest Soil	EEVRDYTIADGILYARGDYYTDGYWNKKIALSTLNVSQTLAANAARNVKFVLPSSPNEVITRP
Ga0209004_10531792	3300027376	Forest Soil	NYYTDGYWDKKIDLSTLDVAETVKANAMRNVKFVLPSSPNEVITRP
Ga0209221_10066781	3300027609	Forest Soil	WNKKIGLATLDVAQTLQANANRNVNFALPTSPNEVITRP
Ga0209625_10577461	3300027635	Forest Soil	ADGALYSRGDYYTDGYWNKKISLSNLNLAETIQANVARNVNFILPKSPNEVITRP
Ga0209009_11145222	3300027667	Forest Soil	RDYAIADGTLYARGDYYTDGYWQKKIALSTLNVPQTIEANARHSIKFILPTSPNEVVTRP
Ga0209038_101915202	3300027737	Bog Forest Soil	FRDGHSEEVRDYTIADGILYARGDYYTDGYWTKKIALSTLSVSQTLEANAQRNVKFILPKSPNEVITRP
Ga0209448_101551892	3300027783	Bog Forest Soil	WTKKIELSALNVSQTLEANMTRSVKFVLPASPNEVITRP
Ga0209448_102508102	3300027783	Bog Forest Soil	RKIELSALNVAQTLEANTTRNVKFILPASPNEVITRP
Ga0209039_101230432	3300027825	Bog Forest Soil	KKIDLSCVNIAQTLETNAKRNVKFVLPKSPNEIIARP
Ga0209274_100283001	3300027853	Soil	DGHHEEVRDYTIADGILYARGDYYTDGYWTRKIELSTLNLTQTLEANTARNIKFVLPTSPNQVITRP
Ga0209579_106162242	3300027869	Surface Soil	DYTIADGTLYAQGDFYIDGYWNKQIALATLDIPKTLQTNSALGVTFTLPSSPNEVITRF
Ga0209006_100410623	3300027908	Forest Soil	EEVRDYTIADGMLYARGDYYTDGYWNKKIDLATLNVAETMQANASRSVKFTLPSSPNEVITRP
Ga0209006_109366332	3300027908	Forest Soil	EEVRDYTIADGMLYARGDYYTDGYWNKKIDLATLNVAETIEANASRSVKFTLPSAPNEVITRP
Ga0302231_100195823	3300028775	Palsa	IDLATLNVPETLQANGTRSVKFILPSSPNEVITRP
Ga0302225_100047337	3300028780	Palsa	HTEEVRDYAIANGTLYARGDYYTDGYWNKKIDLAALNIPQTLKTNATRNVKFVLPASPNEVITRP
Ga0302226_101075383	3300028801	Palsa	RDYTIADGMLYARGDYYTDGYWNKKIDLATLNVPETLQANGTRSVKFILPSSPNEVITRP
Ga0302229_102222442	3300028879	Palsa	VRDYTIADGMLYARGDYYTDGYWNKKIDLATLNVPETLQANGTRSVKFILPSSPNEVITR
Ga0311361_111909893	3300029911	Bog	DGYWNKKISLSTLNVAQTLQANNARNVNFVLPSSPNEVITRP
Ga0311361_113360961	3300029911	Bog	GDYYTDGYWNKTIALSTLNLAQTLEANATRPVKFILPSSPNEVITRP
Ga0311362_100529351	3300029913	Bog	ARGDYYTDGYWNKTIALSTLNLAQTLEANATRTVKFVLPSSPNEVITRP
Ga0311359_1001290513	3300029914	Bog	NGTLYARGDYYTDGYWNKKIDLSALKIPETLQTNAARNVKFVLPKSPNEVITRP
Ga0311346_108015722	3300029952	Bog	RGDYYTDGYWNKTIALSTLNLAQTLEANATRTVKFVLPSSPNEVITRP
Ga0311338_103318411	3300030007	Palsa	LYARGDFYTDGYWNKTIQLSTLNVPETLSANSAQGVKFILPSAPNEVITRP
Ga0311338_115712811	3300030007	Palsa	RDGHTEEIRDYTIADGILYARGDYYTDGYWNKKIAVSTLNVPQTLEANTTRNIKFVLPTSPNEVITRP
Ga0302274_101621021	3300030041	Bog	DYTIADGILYARGDYYTDGYWNKTIALSTLNLAQTLEANATRTVKFVLPSSPNEVITRP
Ga0310039_102316372	3300030706	Peatlands Soil	VRDYAIADGMLYVRGDYYTDGYWNKKIELSSLNVSQTQKANASRNVRFVLPSSPNEVITR
Ga0170824_1180603582	3300031231	Forest Soil	ARGDYYTDGYWNKKIALSTLDVAQTMQANATRSVNFVLPSSPNEIVTRP
Ga0302324_1009683653	3300031236	Palsa	TEEVRDYAIANGTLYARGDYYTDGYWNKKIDLSALKIPETLQTNAAKNVKFVLPTSPNEVITRP
Ga0302324_1020432171	3300031236	Palsa	GDYYTDGYWNKKIDLATLDLTRTEQANADHNVNFVLPSSPNEVITRF
Ga0302326_108809541	3300031525	Palsa	DYYTDGYWTKKIDLAALNIPETLQTNAARNVKFVLPTSPNEVITRP
Ga0310686_1018412151	3300031708	Soil	DGILYARGDYYTDGYWSKKIDLSTLNVSQTLAANTARNVKFVLPSSPNEVITRP
Ga0310686_1077634622	3300031708	Soil	RDYAIADGILYARGDYYIDGYWNKRIALSTLDLAQTLQANTNRNVNFVLPSSPNEVITRP
Ga0310686_1096487923	3300031708	Soil	YARGDYYTDGYWNKKIDLATLNVAETMQANASRSVKFTLPSSPNEVITRP
Ga0310686_1124249801	3300031708	Soil	SEQVRDYTIAQGTLYARGDYYTDGYWNKKIDLANIDVRQTLQANAANNVNFVLPSSPNEVITRP
Ga0310686_1155406821	3300031708	Soil	DYYTDGYWTKKIALATLNVSDTLQANNKRNVKFTLPSSPNEVITRP
Ga0307476_100328603	3300031715	Hardwood Forest Soil	YTIADGILYARGDYYTDGYWNKKIALSTLNVSQTLAANAARNVKFVLPSSPNEVITRP
Ga0307476_100825051	3300031715	Hardwood Forest Soil	DYYSDGYWSKKIDLSAVDLPQTLQANSARNVKFVLPSAPNEVVTRP
Ga0307476_102551172	3300031715	Hardwood Forest Soil	EEVRDYTIADGILYARGDFYTDGYWNKKINLATLDLAQTVQANVSRNVRFVLPSSPNEVIARF
Ga0307476_105684012	3300031715	Hardwood Forest Soil	HDYTIADGFLYARGNYYTDGYWDKKIDLSTLDVAETVKANAMRNVKFVLPSSPNEVITRP
Ga0307476_112770632	3300031715	Hardwood Forest Soil	GILYARGDYYADGYWNKKIALSTLDVAQTVQANTARNVNFVLPSSPNEVITRP
Ga0307474_115810452	3300031718	Hardwood Forest Soil	DYTIADGILYARGDFYTDGYWNKKINLATLDLAQTVQANVSRNVRFVLPSSPNEVIARF
Ga0307477_107000082	3300031753	Hardwood Forest Soil	EEVRDYTIADGFLYARGDYYSDGYWSKKIDLSVVDLPQTLQANSARNVKFVLPSAPNEVVTRP
Ga0307475_101837121	3300031754	Hardwood Forest Soil	ILYARGDYYTDGYWTKKIELSTLNVVETLQANTKRNVKFVLPTSPNEVITRP
Ga0307475_107056872	3300031754	Hardwood Forest Soil	EEVRDYTIADGFLYARGDYYADGYWNKKIDLSTLDLTQTQQANATRNVKFVLPASPNEVITRF
Ga0307478_103736372	3300031823	Hardwood Forest Soil	WNKKINLATLDLAQTVQANVSRNVRFVLPSSPNEVIARF
Ga0307479_115440802	3300031962	Hardwood Forest Soil	GILYARGDYYTDGYWTKKIALSTLNVVETLQANTKRNVKFVLPASPNEVITRP
Ga0335080_100753911	3300032828	Soil	AVLVYGDGYREEVRDYVIADGNLYARGEYWRDGYWNKNIRLSALDVPATIKANQAKGIQFVLPSSPNEVVTRP
Ga0335080_106041162	3300032828	Soil	GTLYVRGDYWMDGYWNKRISLAALDLPASISASSARGVRFVLPSSPNEVITRP
Ga0335071_100223925	3300032897	Soil	VLYARANYYADGAWNKKIELARVNVADTIATNQSRGVAFRLPSSPNEVVTRP
Ga0334854_008924_2_157	3300033829	Soil	LYARGDYYTDGYWNKKIAVSTLNVPQTLEANTTRNIKFVLPTSPNEVITRP
Ga0370483_0040358_2_154	3300034124	Untreated Peat Soil	YARGDYYTDGYWNKKIALATLNVADTVHANNERNVNFVLPSSPNEVITRP
Ga0370515_0179136_776_904	3300034163	Untreated Peat Soil	DGYWNKKIDLAGINVSGTLEANAARSVKFVLPSSPNEVITRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075773

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences