Metagenome / Metatranscriptome Family F075772

Basic Information
Family ID	F075772
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	62 residues
Representative Sequence	AFGDARVSTWTTHPKRDQIHVPAALIAAAGVAKLTMAEQEVVFDIPTLLDATLELCEPVGHA
Number of Associated Samples	100
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.69 %
% of genes near scaffold ends (potentially truncated)	96.61 %
% of genes from short scaffolds (< 2000 bps)	94.07 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Unclassified (68.644 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.576 % of family members)
Environment Ontology (ENVO)	Unclassified (27.119 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.915 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.22% β-sheet: 8.89% Coil/Unstructured: 58.89%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00459	Inositol_P	82.20
PF12710	HAD	5.93
PF00271	Helicase_C	1.69
PF13419	HAD_2	1.69
PF14690	zf-ISL3	0.85
PF07498	Rho_N	0.85
PF00085	Thioredoxin	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
All Organisms	root	All Organisms	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
cellular organisms	root	All Organisms → cellular organisms	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	17.80 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	7.63 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.63 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.69 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.63 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.69 %
sulfur-oxidizing symbionts	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts	0.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.63 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.69 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.85 %
Candidatus Endoriftia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → Candidatus Endoriftia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.63 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.69 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	0.85 %
Candidatus Endoriftia persephone	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → Candidatus Endoriftia → Candidatus Endoriftia persephone	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.64 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	7.63 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.69 %
Candidatus Endoriftia persephone str. Hot96_1+Hot96_2	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → Candidatus Endoriftia → Candidatus Endoriftia persephone → Candidatus Endoriftia persephone str. Hot96_1+Hot96_2	0.85 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_11065443	Not Available	546	Open in IMG/M
3300004104\|Ga0058891_1450969	Not Available	532	Open in IMG/M
3300004152\|Ga0062386_101677833	Not Available	530	Open in IMG/M
3300005165\|Ga0066869_10141528	Not Available	514	Open in IMG/M
3300005563\|Ga0068855_100994217	Not Available	882	Open in IMG/M
3300005610\|Ga0070763_10129124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1302	Open in IMG/M
3300005610\|Ga0070763_10311210	Not Available	868	Open in IMG/M
3300005949\|Ga0066791_10097072	Not Available	593	Open in IMG/M
3300006050\|Ga0075028_100869558	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300006052\|Ga0075029_100079912	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1936	Open in IMG/M
3300006893\|Ga0073928_10848814	Not Available	628	Open in IMG/M
3300009088\|Ga0099830_11335139	Not Available	596	Open in IMG/M
3300009088\|Ga0099830_11631352	Not Available	538	Open in IMG/M
3300009522\|Ga0116218_1180572	Not Available	956	Open in IMG/M
3300009525\|Ga0116220_10446980	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300009634\|Ga0116124_1155799	Not Available	638	Open in IMG/M
3300009701\|Ga0116228_10274150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1187	Open in IMG/M
3300009709\|Ga0116227_10285677	Not Available	1264	Open in IMG/M
3300009709\|Ga0116227_10534333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → Candidatus Endoriftia → Candidatus Endoriftia persephone → Candidatus Endoriftia persephone str. Hot96_1+Hot96_2	890	Open in IMG/M
3300009787\|Ga0116226_10769428	Not Available	947	Open in IMG/M
3300010339\|Ga0074046_10252581	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300010862\|Ga0126348_1171244	Not Available	603	Open in IMG/M
3300010864\|Ga0126357_1156535	Not Available	609	Open in IMG/M
3300011120\|Ga0150983_13775321	Not Available	1015	Open in IMG/M
3300012189\|Ga0137388_11261643	Not Available	677	Open in IMG/M
3300012924\|Ga0137413_11811049	Not Available	504	Open in IMG/M
3300012927\|Ga0137416_10660006	Not Available	916	Open in IMG/M
3300014200\|Ga0181526_10427817	Not Available	840	Open in IMG/M
3300014499\|Ga0182012_10477469	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	813	Open in IMG/M
3300014638\|Ga0181536_10024642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4713	Open in IMG/M
3300014654\|Ga0181525_10762226	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300015241\|Ga0137418_11232099	Not Available	525	Open in IMG/M
3300015245\|Ga0137409_10191389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	1847	Open in IMG/M
3300017943\|Ga0187819_10758278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	546	Open in IMG/M
3300018043\|Ga0187887_10352523	Not Available	868	Open in IMG/M
3300018047\|Ga0187859_10621474	Not Available	610	Open in IMG/M
3300019256\|Ga0181508_1496346	Not Available	686	Open in IMG/M
3300019284\|Ga0187797_1316781	Not Available	570	Open in IMG/M
3300019786\|Ga0182025_1208000	Not Available	1631	Open in IMG/M
3300019882\|Ga0193713_1033142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1509	Open in IMG/M
3300019890\|Ga0193728_1078797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1554	Open in IMG/M
3300020021\|Ga0193726_1234731	Not Available	752	Open in IMG/M
3300020579\|Ga0210407_10291232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1274	Open in IMG/M
3300020579\|Ga0210407_10512051	Not Available	938	Open in IMG/M
3300021168\|Ga0210406_10088693	Not Available	2638	Open in IMG/M
3300021180\|Ga0210396_11594121	Not Available	534	Open in IMG/M
3300021384\|Ga0213876_10494867	Not Available	651	Open in IMG/M
3300021402\|Ga0210385_11491652	Not Available	517	Open in IMG/M
3300021404\|Ga0210389_10390358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1094	Open in IMG/M
3300021406\|Ga0210386_10132229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2073	Open in IMG/M
3300021406\|Ga0210386_10390721	Not Available	1198	Open in IMG/M
3300021406\|Ga0210386_11245834	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	628	Open in IMG/M
3300021474\|Ga0210390_11496000	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300021475\|Ga0210392_10265603	Not Available	1220	Open in IMG/M
3300021477\|Ga0210398_10008905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9018	Open in IMG/M
3300021479\|Ga0210410_11720271	Not Available	521	Open in IMG/M
3300022508\|Ga0222728_1089446	Not Available	570	Open in IMG/M
3300023030\|Ga0224561_1026788	Not Available	517	Open in IMG/M
3300024283\|Ga0247670_1056083	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	712	Open in IMG/M
3300024288\|Ga0179589_10548839	Not Available	539	Open in IMG/M
3300026446\|Ga0257178_1034682	Not Available	635	Open in IMG/M
3300027096\|Ga0208099_1021456	Not Available	906	Open in IMG/M
3300027648\|Ga0209420_1200959	Not Available	529	Open in IMG/M
3300027795\|Ga0209139_10077607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1165	Open in IMG/M
3300027855\|Ga0209693_10336515	Not Available	733	Open in IMG/M
3300027867\|Ga0209167_10686989	Not Available	559	Open in IMG/M
3300027884\|Ga0209275_10591829	Not Available	636	Open in IMG/M
3300027898\|Ga0209067_10925369	Not Available	513	Open in IMG/M
3300028047\|Ga0209526_10796101	Not Available	586	Open in IMG/M
3300028773\|Ga0302234_10502424	Not Available	518	Open in IMG/M
3300028785\|Ga0302201_10314110	Not Available	622	Open in IMG/M
3300028813\|Ga0302157_10647016	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300029882\|Ga0311368_10955263	Not Available	569	Open in IMG/M
3300029907\|Ga0311329_10929494	Not Available	544	Open in IMG/M
3300029910\|Ga0311369_10026808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	6697	Open in IMG/M
3300029910\|Ga0311369_11093394	Not Available	623	Open in IMG/M
3300029911\|Ga0311361_10925194	Not Available	745	Open in IMG/M
3300029913\|Ga0311362_10001280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	52187	Open in IMG/M
3300029913\|Ga0311362_11019735	Not Available	644	Open in IMG/M
3300029915\|Ga0311358_10383848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1144	Open in IMG/M
3300029997\|Ga0302302_1153817	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	896	Open in IMG/M
3300030051\|Ga0302195_10165906	Not Available	1043	Open in IMG/M
3300030503\|Ga0311370_11638852	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	664	Open in IMG/M
3300030519\|Ga0302193_10658174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300030573\|Ga0210272_1255515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	546	Open in IMG/M
3300030693\|Ga0302313_10274141	Not Available	674	Open in IMG/M
3300030738\|Ga0265462_11575695	Not Available	616	Open in IMG/M
3300030739\|Ga0302311_10257009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1290	Open in IMG/M
3300030739\|Ga0302311_10305527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1153	Open in IMG/M
3300030739\|Ga0302311_10991866	Not Available	531	Open in IMG/M
3300030740\|Ga0265460_10616729	Not Available	891	Open in IMG/M
3300030740\|Ga0265460_11539137	Not Available	666	Open in IMG/M
3300030743\|Ga0265461_10833801	Not Available	871	Open in IMG/M
3300030874\|Ga0265742_1016270	Not Available	605	Open in IMG/M
3300030906\|Ga0302314_10469898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1364	Open in IMG/M
3300030937\|Ga0138302_1385035	Not Available	572	Open in IMG/M
3300030937\|Ga0138302_1463796	Not Available	827	Open in IMG/M
3300030939\|Ga0138303_1033283	Not Available	593	Open in IMG/M
3300030939\|Ga0138303_1164306	Not Available	502	Open in IMG/M
3300030939\|Ga0138303_1393706	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	622	Open in IMG/M
3300031022\|Ga0138301_1016542	Not Available	606	Open in IMG/M
3300031022\|Ga0138301_1864151	Not Available	529	Open in IMG/M
3300031047\|Ga0073995_10004342	Not Available	914	Open in IMG/M
3300031057\|Ga0170834_113671468	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	585	Open in IMG/M
3300031231\|Ga0170824_119979101	Not Available	532	Open in IMG/M
3300031231\|Ga0170824_126811260	Not Available	552	Open in IMG/M
3300031474\|Ga0170818_110139386	Not Available	509	Open in IMG/M
3300031525\|Ga0302326_11638372	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	853	Open in IMG/M
3300031669\|Ga0307375_10843724	Not Available	514	Open in IMG/M
3300031708\|Ga0310686_101884001	Not Available	3242	Open in IMG/M
3300031708\|Ga0310686_116878179	Not Available	537	Open in IMG/M
3300031708\|Ga0310686_117405014	Not Available	513	Open in IMG/M
3300031718\|Ga0307474_10891520	Not Available	704	Open in IMG/M
3300031726\|Ga0302321_100654363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1175	Open in IMG/M
3300031962\|Ga0307479_11381772	Not Available	663	Open in IMG/M
3300032896\|Ga0335075_11322222	Not Available	614	Open in IMG/M
3300033824\|Ga0334840_084375	Not Available	896	Open in IMG/M
3300034282\|Ga0370492_0272384	Not Available	687	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.92%
Host-Associated	Host-Associated	5.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.20%
Aquatic	Environmental → Aquatic	12.71%
Plants	Host-Associated → Plants	5.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.71%
Peat	Environmental → Terrestrial → Peat	19.49%
Freshwater	Environmental → Aquatic → Freshwater	9.32%
Peat Moss	Host-Associated → Plants → Peat Moss	3.39%
Sediment	Environmental → Aquatic → Sediment	2.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.49%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.32%
Loam	Environmental → Terrestrial → Soil → Loam	7.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.93%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Clay	Environmental → Terrestrial → Soil → Clay	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.58%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.17%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.39%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	3.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030573	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO036SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030874	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_110654431	3300004080	Bog Forest Soil	ARVSTWTMHPKRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEPAGHA*
Ga0058891_14509692	3300004104	Forest Soil	RVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA*
Ga0062386_1016778332	3300004152	Bog Forest Soil	DARISPWTATRRRDQIHVPAALIGAAGVAKLTMAEDQVVFDIPTLLDATLELCEAVGHA*
Ga0066869_101415282	3300005165	Soil	FRDERVGTWTMQPKRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEAAGHG*
Ga0068855_1009942172	3300005563	Corn Rhizosphere	WTMQPKRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEPAGHA*
Ga0070763_101291241	3300005610	Soil	RVSPWTTPQKRDRIHVPAALIAAAGVARLTMAEDEVVFDIPTLLAATLQLCEPVGHA*
Ga0070763_103112101	3300005610	Soil	RDARVGTWTAHSQRDRIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEAAGHA
Ga0066791_100970721	3300005949	Soil	LNRAFGDARVTPWTSTKRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA*
Ga0075028_1008695583	3300006050	Watersheds	WSALNRAFGDARVSTWTTPQRRDQIHVPAALIAAAGVATLTMAEDEVVFDIPTLLDATLQLCEPVGHA*
Ga0075029_1000799124	3300006052	Watersheds	ALTRAFSDARVSTWTTRQQRDQLHVPAALIAAAGVARLTLAEDEVVFDIPTLLDATLELCEAVGHA*
Ga0073928_108488141	3300006893	Iron-Sulfur Acid Spring	DARVSTWTTHPKRDQIHVPAALIAAAGVARLTVSEQEVVFDIPTLLDATLELCEPVGHA*
Ga0099830_113351392	3300009088	Vadose Zone Soil	RVSTWTTHPKRDQIHVPAALIAAAGVARLTLSEQEVVFDIPTLLDATLELCEPVGHA*
Ga0099830_116313522	3300009088	Vadose Zone Soil	WSALNRAFGDARVSTWTMHPKRDQIHVPAALIAAAGVARLTVSEHEVVFDIPTLLDATLELCEPVGHA*
Ga0116218_11805722	3300009522	Peatlands Soil	RAFGDARVSTWMTPRKPDQIQVPAALIGAAGVARLTVAEDQVVFDIPTLLDATLRLCEPAGNA*
Ga0116220_104469802	3300009525	Peatlands Soil	RWSALNRAFGDARVDTWTKPRKADQIHVPAALIAAAGVARLTVAENQVVFDIPTLLDATLQLCQPAGHA*
Ga0116124_11557991	3300009634	Peatland	RWSALNRAFGDARVSTWTTPRRRDAIHVPAALIAAAGVARLTLAADEVVFDIPTLLDATLQLCEPVGHA*
Ga0116228_102741503	3300009701	Host-Associated	GRAFGDQRISPWTSTLKADQIHVPAALIAAAGVARLQVADDEVVFDIPTLLDATLQLCEPAGHA*
Ga0116227_102856771	3300009709	Host-Associated	TWTSPRQRDQIHVPAALIAAAGVARLTVAADEVVFDIPTLLDATLQLCEAVGHA*
Ga0116227_105343332	3300009709	Host-Associated	ALNRAFGDSRVSTWTTPQRRDQLHVPAALIAAAGVARLQVVEDGVVFDIPTLLDATLELCEPVGHA*
Ga0116226_107694281	3300009787	Host-Associated	FGDQRISSWTSAQRAEQIHVPAALIAAAGAARLQVADDEVVFDIPTLLDATLELCEPAGHA*
Ga0074046_102525811	3300010339	Bog Forest Soil	RVSTWTTPQKRDQLHVPAALIAAAGVARLTLAEDEVVFDIPTLLDATLELCEPVGHA*
Ga0126348_11712442	3300010862	Boreal Forest Soil	GDARVSTWTTHPKRDQIHVPAALIAAAGVARLTVSEQEVVFDIPTLLDATLELCEPVGHA
Ga0126357_11565352	3300010864	Boreal Forest Soil	WTTSQKRDLIHVPAALIAAAGVARLKMADDEVVFDIPTLLDATLELCDPVGNA*
Ga0150983_137753212	3300011120	Forest Soil	SPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA*
Ga0137388_112616432	3300012189	Vadose Zone Soil	AQLRWSALNRAFGDARVSTWTTHPKRDQIHVPAALIAAAGVARLTVSEHEVVFDIPTLLDATLELCEPVGHA*
Ga0137413_118110492	3300012924	Vadose Zone Soil	WTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA*
Ga0137416_106600062	3300012927	Vadose Zone Soil	RVSTWTTHPQRDQIHVPAALIAAAGVARLTVSEQEVVFDIPTLLDATLELCEPVGHA*
Ga0181526_104278172	3300014200	Bog	ALNRAFGDARVNPWTSAQKRDQIHVPAALIAAAGVARLTMAEDEVVFDIPTLLDATLQLCEPVGHA*
Ga0182012_104774692	3300014499	Bog	FGDSRVSTWTNARVRNQIHVPAALIAAAGVARLTVDADQVVFDIPTLLDATLQLCEPVGHA*
Ga0181536_100246421	3300014638	Bog	RAFGDARVSTWTTPQKRDQLHVPAALIAAAGVARLTLAEDEVVFDIPTLLDATLELCEPVGHA*
Ga0181525_107622261	3300014654	Bog	LRWSALNRAFRDARVGTWTAHPQRDRIHVPAALIAAAGVARLTMAETEVVFDIPTLLDATLELCEAAGHA*
Ga0137418_112320992	3300015241	Vadose Zone Soil	AQLRWSALNRALGDARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHS*
Ga0137409_101913893	3300015245	Vadose Zone Soil	DERVGTWTMHPRRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEAAGHG*
Ga0187819_107582782	3300017943	Freshwater Sediment	LRWQALNRAFGDERVSTWTSARRRDQIHVPAALIGAAGMARLTVAEDEVVFDIPALLDATLQLCEPVGHA
Ga0187887_103525231	3300018043	Peatland	TWMPPRTRGQIHVPAALIAAAGVARLTMEGDEVVFDIPTLLDSTLQFCEPAGHA
Ga0187859_106214741	3300018047	Peatland	DARVSSWTTPQRRDAIHVPAALIAAAGVARLTLAADEVVFDIPTLLDATLELCEVVGHA
Ga0181508_14963462	3300019256	Peatland	FDDVRLHTWMPPRTRGQIHVPAALIAAAGVARLTMEGDEVVFDIPTLLDSTLQFCEPAGH
Ga0187797_13167811	3300019284	Peatland	RLGTWMTPQKRDRVHVPAALIAAAGVARLTMDGDEVVFDIPTLLDATLQLCEPLGNA
Ga0182025_12080001	3300019786	Permafrost	ALNRAFGDSRVSTWTTQQKRDRLHVPAALIAAAGVARLTLAENEVVFDIPTLLDATLELCEPVGHG
Ga0193713_10331421	3300019882	Soil	WGALNRAFGDARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0193728_10787973	3300019890	Soil	RWSALNRAFGDARVSTWTTQPKRDQIHVPAALIAAAGVARLTVSEQEVVFDIPTLLDATLELCEAVGHA
Ga0193726_12347311	3300020021	Soil	MPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0210407_102912323	3300020579	Soil	AFGDVRVSPWTTLQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0210407_105120511	3300020579	Soil	AFADARLSTWTMHPKRDQIHVPAALIAAAGVARLTMTEQEVVFDIPTLLDATLELCEPVGHG
Ga0210406_100886933	3300021168	Soil	LRWNALNRALADARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0210396_115941212	3300021180	Soil	LNRAFGDARVSTWTTHPRRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEPVGHG
Ga0213876_104948672	3300021384	Plant Roots	IRVSTWTTHPKRDQIHVPAALIGAAGVARLTMANEEVVFDIPTLLDATLELCEPVGHA
Ga0210385_114916522	3300021402	Soil	WTTHPRRDQIHVPAALIAAAGVARLTMAEEEVVFDIPTLLDATLELCEPAGHA
Ga0210389_103903581	3300021404	Soil	LNRAFGDARVSFWTTAQQRDQIHVPAALIAAAGVAKLTIAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0210386_101322294	3300021406	Soil	SSWTTPQRRDQIHVPAALIAAAGVAKLTIAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0210386_103907211	3300021406	Soil	RWSALNRAFADARVTPWTSPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0210386_112458341	3300021406	Soil	MTPQKRDQVHVPAALIAAAGVARLTMEGDEVVFDIPTLLDATLQLCEPAGTA
Ga0210390_114960002	3300021474	Soil	TPQKRDQVHVPAALIAAAGVARLTMEGDEVVFDIPTLLDATLQLCEAAGNA
Ga0210392_102656032	3300021475	Soil	RAAHLRWNALNRALADARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0210398_1000890511	3300021477	Soil	WTTPQRRDQIHVPAALIAAAGVAKLTIAEDEVVFDIPTLLDATLQLCEPIGHG
Ga0210410_117202711	3300021479	Soil	RAFGDARVSSWTTPQRRDQIHVPAALIAAAGVAKLTIAEDEVVFDIPTLLDATLQLCEPVGHG
Ga0222728_10894461	3300022508	Soil	RAFGDARVSSWTTPQRRDQIHVPAALIAAAGVAKLTIAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0224561_10267882	3300023030	Soil	AFRDARVGTWTAHSQRDRIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEAAGHG
Ga0247670_10560831	3300024283	Soil	QLRWTALNRAFGDARVSTWTTPQTRDQLHVPAALIAAAGVARLTMSEDEVVFDIPTLLDATLEMCEPVGHA
Ga0179589_105488391	3300024288	Vadose Zone Soil	DARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHS
Ga0257178_10346821	3300026446	Soil	FGDARVSTWTTHPKRDQIHVPAALIAAAGVARLTVSEHEVVFDIPTLLDATLELCEPVGH
Ga0208099_10214561	3300027096	Forest Soil	AQLRWNALNRAFGDPRLSVWMTPQKQAQYQVPAALIAAAGVARLTMSEDEVAFDIQTLLDATLQLCEPAGHA
Ga0209420_12009591	3300027648	Forest Soil	LNRAFCDARVSPWMSAKQPDQIQVPAALIGAAGVARLTMAEDEVVFDIPTLLDATLQLCEPAGHA
Ga0209139_100776071	3300027795	Bog Forest Soil	RALGDVRINQWTTLKRRDQVQLPAALIAAAGVAKLTMAEDEIVFDIPTLLDATLQLCEPAGNA
Ga0209693_103365151	3300027855	Soil	RAAQLRWTALNRAFRDARVGTWTAHSQRDRIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEAAGHA
Ga0209167_106869892	3300027867	Surface Soil	RPQRDQIHVPAALIAAAGVARLTIAEHEVVFDIPTLLDATLELCEPAGHA
Ga0209275_105918292	3300027884	Soil	AAHLRWSALNRAFGDARVSSWTTPQRRDQIHVPAALIAAAGVAKLTIAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0209067_109253692	3300027898	Watersheds	FGDARISSWTSTRRRDQIHVPAALIAAAGVAKLTMAEDQVVFDIPTLLDATLELCEAAGH
Ga0209526_107961011	3300028047	Forest Soil	GDARVSTWTTHPKRDQIHVPAALIAAAGVARLTMAEEEVVFDIPTLLDATLELCEPAGHA
Ga0302234_105024241	3300028773	Palsa	WSALNRAFGDARVSPWMTAKQPDQIQVPAALIGAAGVARLTMAEDEVVFDIPTLLDATLELCEPEGHA
Ga0302201_103141101	3300028785	Bog	GDARVSSWTTAQRHDQIHVPAALIAAAGVARLTVAADEVVFDIPTLLDVTLQLCEPAGHA
Ga0302157_106470162	3300028813	Bog	AFGDARVSTWTTHPKRDQIHVPAALIAAAGVAKLTMAEQEVVFDIPTLLDATLELCEPVGHA
Ga0311368_109552631	3300029882	Palsa	AQLRWSALNRAFGDARLSTWTTHPKRDQLHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEPVGHA
Ga0311329_109294942	3300029907	Bog	WDALNRAFGDVRLHTWMPPRTRGQVHVPAALIAAAGVARLTMEGDEAVFDIPTLLDATLQFCEPAGHA
Ga0311369_100268081	3300029910	Palsa	RWTALNRAFGDSRVSTWTTQQKRDRLHVPAALIAAAGVARLTLAENEVVFDIPTLLDATLELCEAVGHG
Ga0311369_110933941	3300029910	Palsa	TMHPKRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEPAGHG
Ga0311361_109251941	3300029911	Bog	RAAQLRWGALNRAFDDVRLHTWMPPRTRGQIHVPAALIAAAGVARLTMEGDEVVFDIPTLLDSTLQFCEPAGHA
Ga0311362_1000128048	3300029913	Bog	RWGALNRAFGDARVSSWTNAQKRNQIQVPAALIAAAGVARLTMAEDEVVFDIPTLLDATLELAEPAGHA
Ga0311362_110197351	3300029913	Bog	ALNRAFGDARVSTWTTHPKRDQIHVPAALIAAAGVARLTMTEQEVVFDIPTLLDATLELCEPAGHA
Ga0311358_103838483	3300029915	Bog	WTTPRRPDQIHVPAALIAAAGVARLTMAADDEVVFDIPTLLDATLQLCEPVGNA
Ga0302302_11538172	3300029997	Palsa	GALNRAFGDARVSTWTNARVRNQIHVPAALIAAAGVARLTVAADQVVFDIPTLLDATLQLCEPVGHA
Ga0302195_101659062	3300030051	Bog	TTPRRPDQIHVPAALIAAAGVARLTMAADDEVVFDIPTLLDATLQLCEPVGNA
Ga0311370_116388522	3300030503	Palsa	GAWMSPQKRAQVQVPAALIAAAGVARLTMEADEVVFDIPTLLDATLQLCEPLGNA
Ga0302193_106581741	3300030519	Bog	DDVRLHTWMPPRTRGQIHVPAALIAAAGVARLTMEGDEVVFDIPTLLDSTLQFCEPAGHA
Ga0210272_12555151	3300030573	Soil	VSSWTTPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0302313_102741411	3300030693	Palsa	RVSTWTNARVRNQIHVPAALIAAAGVARLTVAADQVVFDIPTLLDATLQLCEPVGHA
Ga0265462_115756951	3300030738	Soil	QLRWSALNRAFGDARLNTWTMHLRRDQIHVPAALIAAAGVARLTMAEHEVVFDIPTLLDATLELCEPVGHA
Ga0302311_102570091	3300030739	Palsa	WTALNRAFGDSRVSTWTTQQKRDRLHVPAALIAAAGVARLTLAENEVVFDIPTLLDATLELCEAVGHG
Ga0302311_103055271	3300030739	Palsa	LDARVSPWTTPQRRDQIHVPAALIAAAGVAKLTMAKDEVVFDIPTLLDATLQLCEPVGHA
Ga0302311_109918662	3300030739	Palsa	SALNRAFGDARVSSWTTPQRRDQIHVPAALIAAAGVAKLTIAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0265460_106167291	3300030740	Soil	RWSALNRAFGDARVSPWTTPQRRDQIHVPAALIAAAGVAKLTIAEDEVVFDIPTLLDATLQLCEPIGHG
Ga0265460_115391372	3300030740	Soil	RLNTWTMHLRRDQIHVPAALIAAAGVARLTMAEHEVVFDIPTLLDATLELCEPVGHA
Ga0265461_108338012	3300030743	Soil	WTTHPKRDQIHVPAALIAAAGVARLTMAEQQVVFDIPTLLDATLELCEPVGHA
Ga0265742_10162701	3300030874	Soil	AAQLRWSALNRAFGDARVSTWTTHPRRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEPVGHA
Ga0302314_104698983	3300030906	Palsa	ARVSTWTMHPKRDHIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEPVGHA
Ga0138302_13850352	3300030937	Soil	GTWTMQPKRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEPVGHG
Ga0138302_14637961	3300030937	Soil	RWSALNRAFGDARVSTWTTHPKRDQIHVPAALIAAAGVARLTVSEQEVVFDIPTLLDATLELCEAVGNA
Ga0138303_10332831	3300030939	Soil	MRWSALNRAFGDARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEAVGHA
Ga0138303_11643062	3300030939	Soil	VSTWTTHPQRDQIHVPAALIAAAGVARLTVSEQEVVFDIPTLLDATLELCEPVGHA
Ga0138303_13937062	3300030939	Soil	RVGTWTMQPKRDQIHVPAALIAAAGVARLTMAEQEVVFDIPTLLDATLELCEAAGHG
Ga0138301_10165422	3300031022	Soil	RWNALNRALADARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0138301_18641512	3300031022	Soil	FGDARVSTWTTPQTRDQLHVPAALIAAAGVARLTMSEDEVVFDIPTLLDATLEMCEPVGH
Ga0073995_100043421	3300031047	Soil	LNRAFGDARVSTWTTHPQRDQIHVPAALIAAAGVARLTVSEQEVVFDIPTLLDATLELCEAVGHA
Ga0170834_1136714681	3300031057	Forest Soil	WSALNRAFRDERVGTWTMQPKRDQIHVPAALIAAAGVARLTMDEQEVVFDIPTLLDATLELCEAAGRG
Ga0170824_1199791011	3300031231	Forest Soil	ARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDQVVFDIPTLLDATLQLCEPVGHA
Ga0170824_1268112601	3300031231	Forest Soil	QVRWSALNRAIGDARITPWTSFKRRDQIQVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEAAGHA
Ga0170818_1101393862	3300031474	Forest Soil	FGDARVSPWTMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEAVGH
Ga0302326_116383722	3300031525	Palsa	ALNRAFADPRLGTWMTPQKRDQVQVPAALIAAAGVARLTMEADEVVFDIPTLLDATLQLCEPLGNA
Ga0307375_108437242	3300031669	Soil	ERVDRWTRRRKDQIHLPVALIAAAGVARLTMTDDEVVFDIEALLDATLQFSEPAGNA
Ga0310686_1018840011	3300031708	Soil	WMPSPMRNRIHLPAVLIAAAGVARLTMEGDDVVFDIPTLLDAALQFSEPAGHA
Ga0310686_1168781792	3300031708	Soil	ALNRAFGDARVSTWTMHPKRDQIHVPAALIAAAGVARLTMAEEEVVFDIPTLLDATLELCEPVGHA
Ga0310686_1174050141	3300031708	Soil	LRWSALNRAFGDARVHSWTSAQRRNQLHVPAALIAAAGVARLTFDADEVVFDIPTLLDATLQLCEPAGNA
Ga0307474_108915202	3300031718	Hardwood Forest Soil	TMPQRRDQIHVPAALIAAAGVAKLTMAEDEVVFDIPTLLDATLQLCEPVGHA
Ga0302321_1006543633	3300031726	Fen	ALNRAFGDARVSTWTTHPKRNQIHVPAALIAAAGVARLTMAEEEVVFDIPTLLDATLELCEPAGHA
Ga0307479_113817721	3300031962	Hardwood Forest Soil	QLRWSALNRAFGDARVSTWTTHPKRDQIHVPAALIAAAGVARLTVSEQEVVFDIPTLLDATLELCEPVGHA
Ga0335075_113222221	3300032896	Soil	WGALNRAFGDTRIHTWMPQRKRDRIHVPAALIAAAGVARLTMDGDEVVFDIPTLLDATLQFCEPAGHG
Ga0334840_084375_678_896	3300033824	Soil	AQLRWGALNRAFDDVRLHTWMPPRTRGQIHVPAALIAAAGVARLTMEGDEVVFDIPTLLDSTLQFCEPAGHA
Ga0370492_0272384_8_166	3300034282	Untreated Peat Soil	MPPRTRGQIHVPAALIAAAGVARLTMEGDEVVFDIPTLLDSTLQFCEPAGHA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075772

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign