Metagenome / Metatranscriptome Family F075750

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075750
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	44 residues
Representative Sequence	MKSPKLKRISYVKAGVLIVDQVKPAILKGTAVRFDLSKGKGIK
Number of Associated Samples	83
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.84 %
% of genes near scaffold ends (potentially truncated)	47.46 %
% of genes from short scaffolds (< 2000 bps)	85.59 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.695 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.186 % of family members)
Environment Ontology (ENVO)	Unclassified (27.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.610 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.85% β-sheet: 0.00% Coil/Unstructured: 59.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00216	Bac_DNA_binding	24.58
PF00076	RRM_1	2.54
PF01841	Transglut_core	2.54
PF01609	DDE_Tnp_1	1.69
PF13181	TPR_8	1.69
PF10431	ClpB_D2-small	1.69
PF00171	Aldedh	1.69
PF00924	MS_channel	0.85
PF13342	Toprim_Crpt	0.85
PF09210	BE_C	0.85
PF04545	Sigma70_r4	0.85
PF01526	DDE_Tnp_Tn3	0.85
PF02310	B12-binding	0.85
PF04828	GFA	0.85
PF13361	UvrD_C	0.85
PF09900	DUF2127	0.85
PF13701	DDE_Tnp_1_4	0.85
PF00118	Cpn60_TCP1	0.85
PF05621	TniB	0.85
PF13426	PAS_9	0.85
PF02852	Pyr_redox_dim	0.85
PF02660	G3P_acyltransf	0.85
PF13091	PLDc_2	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	24.58
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.69
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.69
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.69
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.69
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.69
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.69
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.69
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.69
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.69
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.85
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.85
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.85
COG1543	Predicted glycosyl hydrolase, contains GH57 and DUF1957 domains	Carbohydrate transport and metabolism [G]	0.85
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0344	Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase	Lipid transport and metabolism [I]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
All Organisms	root	All Organisms	48.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
cellular organisms	root	All Organisms → cellular organisms	48.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.69 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.85 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.69 %
Roseimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.69 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.85 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0751854	Not Available	504	Open in IMG/M
3300002245\|JGIcombinedJ26739_100172768	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300002245\|JGIcombinedJ26739_100755813	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300002917\|JGI25616J43925_10054110	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300002917\|JGI25616J43925_10171960	Not Available	854	Open in IMG/M
3300002917\|JGI25616J43925_10232540	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005445\|Ga0070708_100233640	Not Available	1725	Open in IMG/M
3300005445\|Ga0070708_101827998	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005445\|Ga0070708_101914496	Not Available	550	Open in IMG/M
3300005467\|Ga0070706_100209044	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300005467\|Ga0070706_100412349	Not Available	1258	Open in IMG/M
3300005467\|Ga0070706_101083721	Not Available	738	Open in IMG/M
3300005467\|Ga0070706_102131642	Not Available	507	Open in IMG/M
3300005471\|Ga0070698_100001858	All Organisms → cellular organisms → Bacteria	23527	Open in IMG/M
3300005518\|Ga0070699_100093461	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300005536\|Ga0070697_100876408	Not Available	796	Open in IMG/M
3300005610\|Ga0070763_10224066	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300005764\|Ga0066903_104128334	Not Available	778	Open in IMG/M
3300005764\|Ga0066903_104827750	Not Available	717	Open in IMG/M
3300006028\|Ga0070717_10214596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1690	Open in IMG/M
3300007076\|Ga0075435_100510493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1040	Open in IMG/M
3300007265\|Ga0099794_10449350	Not Available	676	Open in IMG/M
3300009665\|Ga0116135_1200387	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300010047\|Ga0126382_10911288	Not Available	761	Open in IMG/M
3300010048\|Ga0126373_11458116	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010048\|Ga0126373_11884129	Not Available	661	Open in IMG/M
3300010159\|Ga0099796_10045695	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300010339\|Ga0074046_10009480	All Organisms → cellular organisms → Bacteria → Proteobacteria	7342	Open in IMG/M
3300010341\|Ga0074045_10008129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8899	Open in IMG/M
3300010341\|Ga0074045_10275209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300010359\|Ga0126376_12011607	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300010362\|Ga0126377_12214201	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010376\|Ga0126381_101184298	Not Available	1104	Open in IMG/M
3300012181\|Ga0153922_1178673	Not Available	503	Open in IMG/M
3300012202\|Ga0137363_10074370	Not Available	2511	Open in IMG/M
3300012202\|Ga0137363_10172876	Not Available	1714	Open in IMG/M
3300012202\|Ga0137363_10200387	Not Available	1601	Open in IMG/M
3300012205\|Ga0137362_10088312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium	2596	Open in IMG/M
3300012205\|Ga0137362_10950845	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012210\|Ga0137378_10357102	Not Available	1357	Open in IMG/M
3300012361\|Ga0137360_10552872	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300012361\|Ga0137360_11039581	Not Available	707	Open in IMG/M
3300012361\|Ga0137360_11304133	Not Available	627	Open in IMG/M
3300012362\|Ga0137361_11160212	Not Available	694	Open in IMG/M
3300012582\|Ga0137358_10170026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1486	Open in IMG/M
3300012683\|Ga0137398_10208335	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300012918\|Ga0137396_10397217	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300012923\|Ga0137359_10920491	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300012929\|Ga0137404_10811891	Not Available	850	Open in IMG/M
3300014164\|Ga0181532_10413975	Not Available	747	Open in IMG/M
3300014199\|Ga0181535_10276978	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300015264\|Ga0137403_10069012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium	3594	Open in IMG/M
3300016270\|Ga0182036_11374750	Not Available	591	Open in IMG/M
3300016270\|Ga0182036_11507629	Not Available	565	Open in IMG/M
3300016294\|Ga0182041_10755752	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300016319\|Ga0182033_12122643	Not Available	512	Open in IMG/M
3300016357\|Ga0182032_10520350	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300016387\|Ga0182040_10592415	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300016387\|Ga0182040_11750784	Not Available	531	Open in IMG/M
3300016422\|Ga0182039_11808903	Not Available	560	Open in IMG/M
3300016445\|Ga0182038_11788406	Not Available	554	Open in IMG/M
3300018038\|Ga0187855_10138924	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300020581\|Ga0210399_10104991	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300020583\|Ga0210401_10724758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	855	Open in IMG/M
3300020583\|Ga0210401_11599805	Not Available	509	Open in IMG/M
3300021046\|Ga0215015_10898459	Not Available	1436	Open in IMG/M
3300021168\|Ga0210406_10870967	Not Available	680	Open in IMG/M
3300021178\|Ga0210408_10750562	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300021181\|Ga0210388_11097762	Not Available	679	Open in IMG/M
3300021372\|Ga0213877_10064550	Not Available	1072	Open in IMG/M
3300021439\|Ga0213879_10006907	Not Available	2312	Open in IMG/M
3300021444\|Ga0213878_10014117	Not Available	2880	Open in IMG/M
3300022531\|Ga0242660_1034068	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300022713\|Ga0242677_1020473	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300022713\|Ga0242677_1053671	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300024288\|Ga0179589_10482575	Not Available	574	Open in IMG/M
3300025910\|Ga0207684_10612868	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300025910\|Ga0207684_11364452	Not Available	581	Open in IMG/M
3300025922\|Ga0207646_10071094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3108	Open in IMG/M
3300025922\|Ga0207646_10882875	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300025922\|Ga0207646_11741261	Not Available	534	Open in IMG/M
3300025922\|Ga0207646_11930383	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300026304\|Ga0209240_1168718	Not Available	668	Open in IMG/M
3300026304\|Ga0209240_1190313	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300026319\|Ga0209647_1059749	Not Available	1992	Open in IMG/M
3300026319\|Ga0209647_1183824	Not Available	780	Open in IMG/M
3300026551\|Ga0209648_10548204	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300027326\|Ga0209731_1010156	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1227	Open in IMG/M
3300027371\|Ga0209418_1015878	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300027512\|Ga0209179_1074130	Not Available	747	Open in IMG/M
3300027576\|Ga0209003_1022641	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300028536\|Ga0137415_10195040	Not Available	1846	Open in IMG/M
3300030991\|Ga0073994_12352772	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300031564\|Ga0318573_10494233	Not Available	659	Open in IMG/M
3300031573\|Ga0310915_10388882	Not Available	990	Open in IMG/M
3300031573\|Ga0310915_10785830	Not Available	670	Open in IMG/M
3300031719\|Ga0306917_10525973	Not Available	929	Open in IMG/M
3300031780\|Ga0318508_1111622	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031821\|Ga0318567_10764415	Not Available	548	Open in IMG/M
3300031890\|Ga0306925_12167734	Not Available	518	Open in IMG/M
3300031910\|Ga0306923_10087807	All Organisms → cellular organisms → Bacteria	3494	Open in IMG/M
3300031910\|Ga0306923_10088138	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300031910\|Ga0306923_11591814	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031942\|Ga0310916_11449829	Not Available	561	Open in IMG/M
3300031942\|Ga0310916_11728386	Not Available	505	Open in IMG/M
3300031946\|Ga0310910_10579160	Not Available	890	Open in IMG/M
3300031946\|Ga0310910_10949900	Not Available	673	Open in IMG/M
3300031947\|Ga0310909_10880461	Not Available	736	Open in IMG/M
3300031954\|Ga0306926_10352803	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300031954\|Ga0306926_12102708	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032051\|Ga0318532_10215560	Not Available	681	Open in IMG/M
3300032059\|Ga0318533_11323952	Not Available	526	Open in IMG/M
3300032076\|Ga0306924_10233925	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300032261\|Ga0306920_100100207	All Organisms → cellular organisms → Bacteria	4288	Open in IMG/M
3300033289\|Ga0310914_10181221	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300033289\|Ga0310914_10601687	Not Available	991	Open in IMG/M
3300033289\|Ga0310914_11035130	Not Available	721	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.31%
Host-Associated	Host-Associated	1.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.92%
Aquatic	Environmental → Aquatic	3.39%
Plants	Host-Associated → Plants	0.85%
Fungi	Host-Associated → Fungi	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.92%
Freshwater	Environmental → Aquatic → Freshwater	3.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%
Mycelium	Host-Associated → Fungi → Mycelium	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.19%
Loam	Environmental → Terrestrial → Soil → Loam	21.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.24%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	2.54%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_07518541	2228664022	Soil	MESPKRQRISDVKAGVLMIDQVKPAVLEGTAVRFDLSKGKGM
JGIcombinedJ26739_1001727684	3300002245	Forest Soil	MESPKRKRISYVKVGVLIVDQVKPAILKGTAVRLDLSKNEGMK*
JGIcombinedJ26739_1007558131	3300002245	Forest Soil	MKSPKRKRISDIKAGVLVVDQVKSATPERAAVWFDLSKGKGIK*
JGI25616J43925_100541103	3300002917	Grasslands Soil	MESPKRKRISYAKAGVLMVDQVKPAILKGTAMRFGLSKGKGIK*
JGI25616J43925_101719602	3300002917	Grasslands Soil	MESPNRKWISDVKAWVLMIDQVKPAVLEGTAVRFDLSKGKGIK*
JGI25616J43925_102325401	3300002917	Grasslands Soil	MESPKWKRVSYAKAGVLMVDQVKPAIFKGTAMRFGLSEGKGIK*
Ga0070708_1002336402	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MESPKRKRISDVKAGVLMIDQVKPAVFEGTAVRFDLSKGKGIKARVR*
Ga0070708_1018279981	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKSPKRKRISYVKAGVLIVDQVKPAILKGTAVRFDLSKGKGIK*ASIFRT
Ga0070708_1019144961	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LILFSSPSMESPKGKRISDVKARVLMIDQIKPAVLEGTAVRFDLSKGKGIK*
Ga0070706_1002090444	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MESPKLKRISYVKAGVLIVDQVKPAILEGTAVRFDLSKGKGIK*
Ga0070706_1004123492	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MESPKWKRISDIKARVFMVDQVKSAILKGTAVRFDLSKGKGIK*
Ga0070706_1010837212	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKSPKLKRISYVKPGVLIVDQVKSAILKGTAVRFDLSKGEGIK*
Ga0070706_1021316422	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MESPNRKWISDVKASVLMIDQVKPAVLEGTAVRFDLSKGKGIK
Ga0070698_10000185820	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MESPKRKRISDVKAGVLMIDQVKPAVLEGTAVRFDLSKGKGIK*
Ga0070699_1000934612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MESPKRKRISYAKAGILMVDQIKPAILKGTAMRFDLSKGKGIK*
Ga0070697_1008764081	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MESPKRKWISDIKAGVFMVDQVKSAVLKGTAMRCDLSKGKGIK*ASIFRTD
Ga0070763_102240661	3300005610	Soil	MRDTDREYSMKSPKPKVISDVKAGVLIVDQVKAAVLKGTAERFGFPKGPGC*
Ga0066903_1041283341	3300005764	Tropical Forest Soil	PSMKSPKRKRISDAKAGVLIVDQVKPTIPKRTAVRFDPLKGKGVK*
Ga0066903_1048277501	3300005764	Tropical Forest Soil	MKSPKRKRIPDAKARVLIVDQVKPAIPKGTPVRFDLFKGKCIK*
Ga0070717_102145962	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MESPKRKRISDVKAGVLMIDQVKPTILERTAVRFGLSKGKGIK*
Ga0075435_1005104932	3300007076	Populus Rhizosphere	PSMESPKWKRISDVNAGVLTIDQVKTPMLESTAVRFDLPKGKRVK*
Ga0099794_104493501	3300007265	Vadose Zone Soil	TRYLPYSSLPSMKRPKPKRISYVKAGVLIVDQVKPAILKGTAVRFDLSKGKGIK*
Ga0116135_12003873	3300009665	Peatland	FHAHKILPSSLPSMKSPKLKRISYVKAGVLIVDQIKPAILKGTAVRFDLSKGKGIK*
Ga0126382_109112881	3300010047	Tropical Forest Soil	MKSPKRKRISDAKGGVLIVDQVKAAVPEGTAVWFDRSKGKGIK*
Ga0126373_114581161	3300010048	Tropical Forest Soil	PPLCLPSMKSPKRKRISDAKAWVLIVDQVKAAVPEGTAVWFDRSKGKGIK*
Ga0126373_118841291	3300010048	Tropical Forest Soil	MKSPKRKRISDSKAGVLIVDQVKPAMLKETAVRFDLSKGKGVK*
Ga0099796_100456953	3300010159	Vadose Zone Soil	MESPKRKRISDVKAGVLMIDQVKPTFLEGTAVRFDLS
Ga0074046_100094802	3300010339	Bog Forest Soil	MKSPKRKQISYVKAGVLIVDQVKPAILKGAAVRFDLSKGKGIK*
Ga0074045_100081293	3300010341	Bog Forest Soil	MKSPKLKRISYVKAGVLIVDQVKPAILKGTAVRFDLSKGKGIK*
Ga0074045_102752093	3300010341	Bog Forest Soil	MKSPKLKRISYVKAGVLIVDQVKPAILKGTAMRFDLSKGKGI
Ga0126376_120116071	3300010359	Tropical Forest Soil	PSMKSPKRKRISDAKAWVLIVDQVKAAVPEGTAVRFDLSKGKGIK*
Ga0126377_122142011	3300010362	Tropical Forest Soil	SPKRKRISDAKAWVLIVDQVKAAVPEGTAVWFDRSKGKGIK*
Ga0126381_1011842983	3300010376	Tropical Forest Soil	MESPKREQISYVEAGVLILDQVKPAILKGTAVRLNL
Ga0153922_11786731	3300012181	Attine Ant Fungus Gardens	YVPSSSLPSMKSPKPKRISYVNAWALIVDQVKPAILKGTAVRFDLSKGKGIK*
Ga0137363_100743704	3300012202	Vadose Zone Soil	MESPKRKRISYAKAGILMVDQIKPAILKGTAMRFDLSKGKGI
Ga0137363_101728762	3300012202	Vadose Zone Soil	MKSPKPKQISYVNAWVLIVDQVKPTVLKGTAVRFDLSKGKGIK*
Ga0137363_102003872	3300012202	Vadose Zone Soil	MKSPKRKRISYVNAWVLIVDQVKPAILKGTAVRFDLSKGKG
Ga0137362_100883122	3300012205	Vadose Zone Soil	MESPKRKRISDVKAGVLMIDQVKPAVLEGTAVRFDLSKGKGM*
Ga0137362_109508451	3300012205	Vadose Zone Soil	TSMESPKRKRISYVKAGVLMVEQVQPAILKGTDVRFDLCKNEGVK*
Ga0137378_103571022	3300012210	Vadose Zone Soil	MESPKRKRISDVKAGVLMIDQVKPAVLEGAAVRFDLSKGKGIK*
Ga0137360_105528722	3300012361	Vadose Zone Soil	MQSPKRKRIFDAKAGVLIVDQVKTAIPKGTAVRFDLSKGKGIE*
Ga0137360_110395811	3300012361	Vadose Zone Soil	MKSPKLKRIPYVKAGVLIVDQVKPAILKGTAVRFDLSKGKGIK*
Ga0137360_113041331	3300012361	Vadose Zone Soil	MESPKRKRISYVKAGVLMVEQVQPAILKGTDVRFDLCKNEGVK*
Ga0137361_111602121	3300012362	Vadose Zone Soil	SDAKGGVLMVDQVKATVPQGTAVRFDLSEGKGIK*
Ga0137358_101700261	3300012582	Vadose Zone Soil	MESPKRKRISDVKAGVLMIDQVKPTFLEGTAVRFDLSK
Ga0137398_102083351	3300012683	Vadose Zone Soil	MESPKRKRISDVKAGVLMIDQVKPTFLEGTAVRFDLSKGKGIK*
Ga0137396_103972172	3300012918	Vadose Zone Soil	MESPKRERISDVKAGALMIDQVKPAVLEGTAVRFDLSKGKGIK*
Ga0137359_109204912	3300012923	Vadose Zone Soil	MKSPKPKRISYVNAWVLIIDQVKPAILKGTAVRFDLSKGKGIK*
Ga0137404_108118912	3300012929	Vadose Zone Soil	MESPKRKRISDVKAGVLMIDQVKPAALEGTAMRFDLSKGKGIK*
Ga0181532_104139751	3300014164	Bog	MKSPKLKRISYVKAGVLIVDQVKPDIFQGTAVRFDLSKGKGIK*
Ga0181535_102769781	3300014199	Bog	LKRISYVKAGVLIVDQVKPDIFQGTAVRFDLSKGKGIK*
Ga0137403_100690121	3300015264	Vadose Zone Soil	MESPKRKRISDVKAGVLMIDQVKPAALERTAVRFDLS
Ga0182036_113747502	3300016270	Soil	ADKRHTSPPPLCLPSMKSPKRKRISDAKAWVLIVDQVKAAVSEGTAVWFDRSKGKGIK
Ga0182036_115076291	3300016270	Soil	ADKRHTSPPPLCLPSMKSPKRKRISDAKAWVLIVDQVKAAVPEGTAVWFDRSKGEGIK
Ga0182041_107557522	3300016294	Soil	MESPKPQQISYVKAGILIVDQVKPAILKGTAVRFDLSKGKGIK
Ga0182033_121226432	3300016319	Soil	MESPKWKPISDVKARVLIVDQVEPSVPKGTSVRFDLP
Ga0182032_105203502	3300016357	Soil	MESPKRKRISYVKARVLIVKQVKPAILEGTDVRLDVSKNEGVK
Ga0182040_105924152	3300016387	Soil	LPSMKSPKRKRIPDAKAGVLIVEQVKPAMLKGTAVRFDLSKGKGVK
Ga0182040_117507841	3300016387	Soil	MKSPKRKRISDAKGGVLIVDQVKAAVPEGTAVWFDLSKGNGIQGASIFR
Ga0182039_118089031	3300016422	Soil	PPPLCLPSMKSPKRKRISDAKAWVLIVDQVKAAVPEGTAEWFDLSKGKRIK
Ga0182038_117884062	3300016445	Soil	MKSPKPKRISYVKSRVLIVDEVKPAILKGTAVRFDLSKGKGIK
Ga0187855_101389242	3300018038	Peatland	MKSPKLKRISYVKAGVLIVDQIKPAILKGTAVRFDLSKGKGIK
Ga0210399_101049913	3300020581	Soil	MKSPKPKIISDVKAWVLIVDQVKAAVLKGTAERFGFPKGQSIK
Ga0210401_107247582	3300020583	Soil	MERHPKRKRIPYVKAGVLIVDQVKPALLKGTAVRFDLSKGKGIK
Ga0210401_115998052	3300020583	Soil	SLSMESPKRKRISYVKVGLLIVDQVKPAILKGTAVRLDLSKNEGMK
Ga0215015_108984592	3300021046	Soil	MESPKRKRISYVKVGVLIVDQVKPAILKGTAVRLDLSKNEGMK
Ga0210406_108709671	3300021168	Soil	MKSPKPKVISDVKAGVLIVDQVKAAVLKGTAERFGFPKGQ
Ga0210408_107505622	3300021178	Soil	GSPKRKRISYVKVGVLIVDQVKPAILKGTAVRLDLSKNEGMK
Ga0210388_110977621	3300021181	Soil	MKSPKPKVISDVKAGVLIVDQVKAAVLKGTAERFGFPKGQGVK
Ga0213877_100645502	3300021372	Bulk Soil	MESPKQKRISYVRAGVLIVKQVKPALLKRTAVRLDLSKGKGIK
Ga0213879_100069072	3300021439	Bulk Soil	MESPKQKRISYVKAGVLIVKQVKPALLKRTAVRLDLSKGKGIK
Ga0213878_100141171	3300021444	Bulk Soil	MESPKREQISYVKTGVLIVDQVEPAILKRTAVRLDLPKGISRSSS
Ga0242660_10340683	3300022531	Soil	MKSPKLKRISYFKAGVLIVDYVKPAILKGTAVRFDLSKGKGIK
Ga0242677_10204732	3300022713	Soil	TRRDALLARDLPCDSVPSMKSPKPKIISDVKAWVLIVDQIKAAVLKGTAKRFGLPKGQGI
Ga0242677_10536712	3300022713	Soil	SMKSPKPKVISDVKAGVLIVDQVKAAVLKGTAERFGFPKGQGVK
Ga0179589_104825751	3300024288	Vadose Zone Soil	MESPKRKRTSDVKAGVLMIDQVKPSVLEGTAVRFDLSK
Ga0207684_106128682	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKSPKPKRIAYVKAGVLIVDQVKPAIIKGTAVRFDLSKGEGIK
Ga0207684_113644521	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKSPKLKRISYVKPGVLIVDQVKSAILKGTAVRFDLSKGEGIK
Ga0207646_100710942	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MQSPKRKRIFDAKAGVLIVDQVKTAIPKGTAVRFDLSKGKGIE
Ga0207646_108828752	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ESPKWKRISDAKARVLVVDQVKPAILQRTAVRFDLTKDQGIK
Ga0207646_117412611	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FFSSPSMESPKRKRISDVKAGVLMIDQVKPSVLEGAAVRFDLSEGKGIK
Ga0207646_119303831	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ESPNRKWISDVKAWVLMIDQVKPAVLEGTAVRFDLSKGKGIK
Ga0209240_11687182	3300026304	Grasslands Soil	MESPKRKRISDVKAGVLMIDQVKPTILERTAVRFGLSKGKGIK
Ga0209240_11903131	3300026304	Grasslands Soil	SMESPKRKRISDVKARVLVVDQVKSAILKGTAVRFDLSKGKGIK
Ga0209647_10597492	3300026319	Grasslands Soil	LILLSSPSMESPKRKRISDVKAGVLMIDQVKPAILEGTAVRFDLSKGKGIK
Ga0209647_11838242	3300026319	Grasslands Soil	MESPNRKWISDVKAWVLMIDQVKPAVLEGTAVRFDLS
Ga0209648_101190742	3300026551	Grasslands Soil	MESPKRKWISYAKAGVLMVDQVEPAVLEGTDMRFDLPEGNGIK
Ga0209648_105482042	3300026551	Grasslands Soil	LILLSSPSMESPKRKRISDVKAGVLMIDQVKPAVLEGTAVRFDLSKGKGIK
Ga0209731_10101562	3300027326	Forest Soil	KLKRISYVKAGVLIVDQVKPAILKGTAVRFDLSKGKGIK
Ga0209418_10158783	3300027371	Forest Soil	MKSPKLKRISYVKAGVLIVDQVKPAILKGTAVRFDLSKGKGIK
Ga0209179_10741301	3300027512	Vadose Zone Soil	MKSPKPKQISYVNAWVLIVDQVKPTVLKGTAVRFDLSKGKGIK
Ga0209003_10226412	3300027576	Forest Soil	MKSPKLKRISYVKAWVLIVDQVKPAILKGTAVRFDLSKGKGIK
Ga0137415_101950403	3300028536	Vadose Zone Soil	MESPKRKRISDVKAGVLMIDQVKPTFLEGTAVRFDL
Ga0073994_123527721	3300030991	Soil	MEGPKRKRISDVKAGILMIDQVKPAALEGTAVGFDLSKGKGIK
Ga0318573_104942331	3300031564	Soil	MKSPKRKRIFDAKDGVLIVDQVKAAVPEGTAVWFDRSKGKGIK
Ga0310915_103888821	3300031573	Soil	LCLPSMKSPKRKRIFDAKDGVLIVDQVKAAVPKGTAVRFDLSKGKGIK
Ga0310915_107858302	3300031573	Soil	MKNPKPKRISYIDAWALIVDQIKPAILEGTAVRFDLSEGKGIK
Ga0306917_105259732	3300031719	Soil	MKSPKRKRISDAKGGVLIVDQVKAAAPEGTAVWFDLSKGKGIK
Ga0318508_11116222	3300031780	Soil	SMKSPKRKRIFDAKDGVLIVDQVKAAVPEGTAVWFDRSKGEGIK
Ga0318567_107644151	3300031821	Soil	MKSPKRKRISDVKAWVLIVDQVKAAVPEGTAVWFDRSKGEGIK
Ga0306925_121677341	3300031890	Soil	MESPKREQISYVKTGVLIVDQVEPAILNGTAVRLDLPKNERIK
Ga0306923_100878071	3300031910	Soil	MKSPKRKRISDAKGGVLIVDQVKAAVPEGTAVWFDLSKGNGIQGASIFRTVL
Ga0306923_100881382	3300031910	Soil	MKNPKSKRISYIDAWALIVDQIKPAILEGTAVRFDLSEGKGIK
Ga0306923_115918142	3300031910	Soil	RYTSPPRLCLPSMKSPKRKRISDAKAGVLIVDQVKAAVPEGTAVWFDRSKGKGIK
Ga0310916_114498291	3300031942	Soil	SALPSMKSPKRKRIPDAKAGVLIVEQVKPAMLKGTAVRFDLSKGKGVK
Ga0310916_117283861	3300031942	Soil	MKSPKRKRVSDAKGGVLIVDQVKAAVPEGTAVWFDLSKGNGIQGASIF
Ga0310910_105791601	3300031946	Soil	MKSPKRKRIFDAKDGVLIVDQVKAAVPKGTAVRFDLSKGKGVK
Ga0310910_109499002	3300031946	Soil	MKSPKRKRISDVKAWVLIVDQVKAAVPEGTAVWFDR
Ga0310909_108804611	3300031947	Soil	VKSPKRKRISDAKAGVLIVEQVKPAMLKGTAVRFDLSKGKGVK
Ga0306926_103528031	3300031954	Soil	MKSPKRKRIFDAKDGVLIVDQVKAAVPKGTAVRFDLSKGKGIK
Ga0306926_121027082	3300031954	Soil	RMSYVKSRVLIVDQVKPAILKGTAVRFDLSKGKGIK
Ga0318532_102155602	3300032051	Soil	ISDAKAGVLIVDQVKAAVPEGTAVWFDRSKGKGIK
Ga0318533_113239522	3300032059	Soil	CSSLPSMKNPKPKRISYIDAWALIVDQIKPAILEGTAVRFDLSEGKGIK
Ga0306924_102339254	3300032076	Soil	DKRYTSPPRLCLPSMKSPKRKRISDAKAGVLIVDQVKAAVPEGTAVWFDRSKGKGIK
Ga0306920_1001002073	3300032261	Soil	MKSPKPKRISYVKAGAVIVDQVKPAILKGTAVRFDLSKG
Ga0310914_101812211	3300033289	Soil	MKSSKRKRIFDAKAGVLIVDQVRAAVLEGTAVRFDLSKGE
Ga0310914_106016871	3300033289	Soil	MKSPKRKRISDAKAGVLIVEQVKAAVPEGTAVWFDRSKGKGIK
Ga0310914_110351303	3300033289	Soil	ANLLKSPKPKRISYVKAGAVIVDKVKPAILKGTAVRFDLSKGQGIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075750

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences