Metagenome / Metatranscriptome Family F075606

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075606
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	92 residues
Representative Sequence	REELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Number of Associated Samples	96
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.55 %
% of genes near scaffold ends (potentially truncated)	51.69 %
% of genes from short scaffolds (< 2000 bps)	77.12 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (59.322 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.983 % of family members)
Environment Ontology (ENVO)	Unclassified (49.153 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.525 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.93% β-sheet: 0.00% Coil/Unstructured: 46.07%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01063	Aminotran_4	11.02
PF00581	Rhodanese	8.47
PF03401	TctC	4.24
PF09084	NMT1	3.39
PF07690	MFS_1	1.69
PF00528	BPD_transp_1	1.69
PF06685	DUF1186	0.85
PF00589	Phage_integrase	0.85
PF02915	Rubrerythrin	0.85
PF11994	DUF3489	0.85
PF14525	AraC_binding_2	0.85
PF07978	NIPSNAP	0.85
PF00923	TAL_FSA	0.85
PF13701	DDE_Tnp_1_4	0.85
PF00027	cNMP_binding	0.85
PF13191	AAA_16	0.85
PF00072	Response_reg	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	22.03
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.24
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	3.39
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	3.39
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.32 %
Unclassified	root	N/A	40.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.32 %
Unclassified	root	N/A	40.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.32 %
Unclassified	root	N/A	40.68 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.22 %
Unclassified	root	N/A	40.68 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.44 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.47 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.69 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	8.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.78 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.39 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.54 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	1.69 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.85 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	8.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.78 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	3.39 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	1.69 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
Oceanicella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Oceanicella	0.85 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.85 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.85 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	8.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.78 %
Roseomonas harenae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	3.39 %
unclassified Pseudorhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes	1.69 %
Oceanicella actignis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Oceanicella → Oceanicella actignis	0.85 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.85 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.85 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.68 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	8.47 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.78 %
Roseomonas harenae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	3.39 %
Pseudorhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	1.69 %
Pseudolabrys sp. FHR47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	0.85 %
Cupriavidus sp. KK10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. KK10	0.85 %
Oceanicella actignis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Oceanicella → Oceanicella actignis	0.85 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1004396	All Organisms → cellular organisms → Bacteria → Proteobacteria	2615	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1008932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1662	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10005338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3518	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1007598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1445	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1010784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1746	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1043192	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1053921	Not Available	629	Open in IMG/M
3300000956\|JGI10216J12902_107187497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1089	Open in IMG/M
3300002917\|JGI25616J43925_10174191	Not Available	847	Open in IMG/M
3300002917\|JGI25616J43925_10219049	Not Available	726	Open in IMG/M
3300005332\|Ga0066388_102878158	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005332\|Ga0066388_103906242	Not Available	760	Open in IMG/M
3300005363\|Ga0008090_15004652	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005436\|Ga0070713_101678240	Not Available	617	Open in IMG/M
3300005445\|Ga0070708_101209979	Not Available	707	Open in IMG/M
3300005467\|Ga0070706_100157884	Not Available	2117	Open in IMG/M
3300005536\|Ga0070697_100162584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1886	Open in IMG/M
3300005713\|Ga0066905_101125275	Not Available	698	Open in IMG/M
3300005713\|Ga0066905_101701825	Not Available	579	Open in IMG/M
3300005713\|Ga0066905_101735095	Not Available	574	Open in IMG/M
3300005764\|Ga0066903_100248029	All Organisms → cellular organisms → Bacteria → Proteobacteria	2742	Open in IMG/M
3300005764\|Ga0066903_104387962	Not Available	753	Open in IMG/M
3300006038\|Ga0075365_11279286	Not Available	515	Open in IMG/M
3300006058\|Ga0075432_10155172	Not Available	882	Open in IMG/M
3300009089\|Ga0099828_10856637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300009100\|Ga0075418_10106385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2979	Open in IMG/M
3300009147\|Ga0114129_10213905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	2604	Open in IMG/M
3300009147\|Ga0114129_11305770	Not Available	899	Open in IMG/M
3300009792\|Ga0126374_10862684	Not Available	698	Open in IMG/M
3300010043\|Ga0126380_10370143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1051	Open in IMG/M
3300010043\|Ga0126380_11757886	Not Available	559	Open in IMG/M
3300010047\|Ga0126382_10008696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	4761	Open in IMG/M
3300010047\|Ga0126382_10188208	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300010047\|Ga0126382_10870776	Not Available	776	Open in IMG/M
3300010048\|Ga0126373_10196610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1951	Open in IMG/M
3300010361\|Ga0126378_10752801	Not Available	1085	Open in IMG/M
3300010362\|Ga0126377_11320796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	793	Open in IMG/M
3300010366\|Ga0126379_13031373	Not Available	562	Open in IMG/M
3300010863\|Ga0124850_1004424	All Organisms → cellular organisms → Bacteria → Proteobacteria	4344	Open in IMG/M
3300012180\|Ga0153974_1101394	Not Available	654	Open in IMG/M
3300012200\|Ga0137382_10614625	Not Available	777	Open in IMG/M
3300012211\|Ga0137377_11225773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	680	Open in IMG/M
3300012285\|Ga0137370_10447499	Not Available	786	Open in IMG/M
3300012357\|Ga0137384_11455347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300012361\|Ga0137360_10242387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1477	Open in IMG/M
3300012971\|Ga0126369_10250937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1741	Open in IMG/M
3300012971\|Ga0126369_11244566	Not Available	834	Open in IMG/M
3300015372\|Ga0132256_100686393	Not Available	1140	Open in IMG/M
3300016270\|Ga0182036_10238986	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1354	Open in IMG/M
3300016404\|Ga0182037_10108762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2012	Open in IMG/M
3300018067\|Ga0184611_1096004	Not Available	1027	Open in IMG/M
3300019996\|Ga0193693_1041506	Not Available	767	Open in IMG/M
3300025910\|Ga0207684_10464518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. KK10	1086	Open in IMG/M
3300025928\|Ga0207700_11940149	Not Available	515	Open in IMG/M
3300026319\|Ga0209647_1025411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3570	Open in IMG/M
3300026557\|Ga0179587_11179998	Not Available	504	Open in IMG/M
3300027681\|Ga0208991_1243189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	512	Open in IMG/M
3300027907\|Ga0207428_11319912	Not Available	500	Open in IMG/M
3300028047\|Ga0209526_10103087	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300028720\|Ga0307317_10344992	Not Available	503	Open in IMG/M
3300028828\|Ga0307312_10903856	Not Available	585	Open in IMG/M
3300028876\|Ga0307286_10215027	Not Available	699	Open in IMG/M
3300031543\|Ga0318516_10167236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1264	Open in IMG/M
3300031546\|Ga0318538_10168398	Not Available	1162	Open in IMG/M
3300031572\|Ga0318515_10558656	Not Available	609	Open in IMG/M
3300031668\|Ga0318542_10037328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2137	Open in IMG/M
3300031679\|Ga0318561_10052066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2051	Open in IMG/M
3300031680\|Ga0318574_10075218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1831	Open in IMG/M
3300031680\|Ga0318574_10190457	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300031682\|Ga0318560_10374605	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300031713\|Ga0318496_10085398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1679	Open in IMG/M
3300031719\|Ga0306917_10021226	All Organisms → cellular organisms → Bacteria → Proteobacteria	4009	Open in IMG/M
3300031719\|Ga0306917_11343924	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300031736\|Ga0318501_10491657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Oceanicella → Oceanicella actignis	668	Open in IMG/M
3300031744\|Ga0306918_10020303	All Organisms → cellular organisms → Bacteria → Proteobacteria	4015	Open in IMG/M
3300031744\|Ga0306918_10829224	Not Available	721	Open in IMG/M
3300031748\|Ga0318492_10440779	Not Available	687	Open in IMG/M
3300031751\|Ga0318494_10098576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1608	Open in IMG/M
3300031764\|Ga0318535_10525029	Not Available	525	Open in IMG/M
3300031768\|Ga0318509_10514731	Not Available	668	Open in IMG/M
3300031770\|Ga0318521_10078631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1774	Open in IMG/M
3300031771\|Ga0318546_10055713	All Organisms → cellular organisms → Bacteria	2477	Open in IMG/M
3300031771\|Ga0318546_10265483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1183	Open in IMG/M
3300031771\|Ga0318546_10813677	Not Available	658	Open in IMG/M
3300031781\|Ga0318547_10448650	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300031793\|Ga0318548_10032741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2292	Open in IMG/M
3300031795\|Ga0318557_10511290	Not Available	551	Open in IMG/M
3300031798\|Ga0318523_10114414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1330	Open in IMG/M
3300031845\|Ga0318511_10012620	All Organisms → cellular organisms → Bacteria	2907	Open in IMG/M
3300031859\|Ga0318527_10382968	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031860\|Ga0318495_10133083	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300031879\|Ga0306919_11322133	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300031890\|Ga0306925_10806758	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300031890\|Ga0306925_11843333	Not Available	577	Open in IMG/M
3300031894\|Ga0318522_10021154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2115	Open in IMG/M
3300031896\|Ga0318551_10516741	Not Available	685	Open in IMG/M
3300031910\|Ga0306923_10819006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	1026	Open in IMG/M
3300031947\|Ga0310909_10018669	All Organisms → cellular organisms → Bacteria	4950	Open in IMG/M
3300031947\|Ga0310909_10334035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	1271	Open in IMG/M
3300031954\|Ga0306926_10761351	Not Available	1170	Open in IMG/M
3300032008\|Ga0318562_10316576	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300032035\|Ga0310911_10056130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2065	Open in IMG/M
3300032043\|Ga0318556_10120323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	1341	Open in IMG/M
3300032044\|Ga0318558_10173307	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300032051\|Ga0318532_10019987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2153	Open in IMG/M
3300032052\|Ga0318506_10036677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1915	Open in IMG/M
3300032060\|Ga0318505_10033824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2106	Open in IMG/M
3300032060\|Ga0318505_10541061	Not Available	548	Open in IMG/M
3300032063\|Ga0318504_10407141	Not Available	649	Open in IMG/M
3300032065\|Ga0318513_10398652	Not Available	671	Open in IMG/M
3300032066\|Ga0318514_10138810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas harenae	1255	Open in IMG/M
3300032089\|Ga0318525_10114229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1380	Open in IMG/M
3300032089\|Ga0318525_10204970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1014	Open in IMG/M
3300032091\|Ga0318577_10022742	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300032261\|Ga0306920_100406028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2025	Open in IMG/M
3300033289\|Ga0310914_10375816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1285	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.22%
Host-Associated	Host-Associated	6.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.37%
Plants	Host-Associated → Plants	5.93%
Aquatic	Environmental → Aquatic	0.85%
Fungi	Host-Associated → Fungi	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.08%
Sediment	Environmental → Aquatic → Sediment	0.85%
Roots	Host-Associated → Plants → Roots	0.85%
Mycelium	Host-Associated → Fungi → Mycelium	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.81%
Loam	Environmental → Terrestrial → Soil → Loam	13.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.85%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.85%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10043964	3300000579	Forest Soil	MQGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK*
AP72_2010_repI_A01DRAFT_10089323	3300000579	Forest Soil	PLSAAALVCMQGFREELGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK*
AF_2010_repII_A1DRAFT_100053387	3300000597	Forest Soil	MQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGDKTKAEGTPVKDIAPAK*
AP72_2010_repI_A10DRAFT_10075983	3300000651	Forest Soil	MQGFREELGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNTANKPGEKTKAEGTPVKEVAPAK*
AF_2010_repII_A100DRAFT_10107841	3300000655	Forest Soil	RMRQRPACMQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGDKTKAEGTPVKDIAPAK*
AP72_2010_repI_A100DRAFT_10431922	3300000837	Forest Soil	HDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK*
AP72_2010_repI_A001DRAFT_10539212	3300000893	Forest Soil	DSVRMRQRPVCMQGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK*
JGI10216J12902_1071874971	3300000956	Soil	MSSRSRMASCSRTVDPIAELLYGWCAQQMEDAMCYAKDYRLVDDLKKAEDTQVVQERRAGLIARLLNVANKHGEKAKADKTAVKEVAPAK*
JGI25616J43925_101741911	3300002917	Grasslands Soil	MWPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQMEDVMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK*
JGI25616J43925_102190492	3300002917	Grasslands Soil	LSEMWPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQMEDVMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK*
Ga0066388_1028781581	3300005332	Tropical Forest Soil	DRIAELLYGWCAKQMEDAMCYAKDYRLFNDLKKAEDTQVVQERRAGLIARLLNVANKHGEKAKADKTPIKEVAPAK*
Ga0066388_1039062422	3300005332	Tropical Forest Soil	MQEFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSEGTPVKEVAPAK*
Ga0008090_150046521	3300005363	Tropical Rainforest Soil	QLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGDKTKAEGTPVKDIAPAK*
Ga0070713_1016782402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LSKMRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCASQMEDVMCYERDYKIFEDRKKAEATRVVQERRTGLIDRLLNAANKHGEKTRAEETPVKEVAPAK*
Ga0070708_1012099791	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCASQMEDVMCYERDYKIFEDRKKAEATRVVQERRTGLIDRLLNAANKHGEKTRAEETPVEEVAPAK*
Ga0070706_1001578843	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCASQMEDVMCYERDYKIFEDRKKAEATRVVQERRTGLIDRLLNAANKHGEKTRAEETPVKEVAPAK*
Ga0070697_1001625844	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCASQMEDVMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK*
Ga0066905_1011252751	3300005713	Tropical Forest Soil	LNKMRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQVEDAMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEEMPVKEVAPAK*
Ga0066905_1017018251	3300005713	Tropical Forest Soil	RMAGCLRTVDRIAELIYGWCAQQMEDAMCYAKDYRFLDNQKKAEDTQVPQERRAGLIARLLNAANKQGEKTEAERTPAKEVAQAK*
Ga0066905_1017350951	3300005713	Tropical Forest Soil	MMASCSQTVDRFAELLYGWCAQQMEDAMCYAKDYNLFDDEKKAEDAQVVKERRASLIDRLLNVTNKHGEMAKADKTPVKEVAPAQ*
Ga0066903_1002480291	3300005764	Tropical Forest Soil	MMASCSQTVDRFAELLCGWCAQQMEDAMCYAKDYNLFDDEKKAEDTQVVKERRASLIDRLLNVANRHGEMAKADKTPVKEVAPA*
Ga0066903_1043879621	3300005764	Tropical Forest Soil	VEAPDKEAAEGYLRTVDRIAELLYGWCAKQMEDAMCYAKDYRLFNDLKKAEDTQVVQERRAGLIARLLNVANKHGEKAKADKTPIKEVAPAK*
Ga0075365_112792861	3300006038	Populus Endosphere	GHDGQLGTVDRIAELLYWWCARQMEDAMCYVKDYKVFDDQKKAEDSQVVQERRAGLIDRLLNAANKHGEKTKAEGTSVKEVAPAK*
Ga0075432_101551721	3300006058	Populus Rhizosphere	MMASCSQTVDRFAELLCGWCAQQMEDAMCYAKDYRFFDDQKKAEDTQVVQERRAGLIARLLNAAKKHGEKIEAERTPAKEVAPAK*
Ga0099828_108566372	3300009089	Vadose Zone Soil	RIAELLYCWCAPQMEDAMCYARDYKAFDDQKKAEDTQVVQERRAGLIDRLLNAANKHGEKTKAEGTPVKEVAPAK*
Ga0075418_101063854	3300009100	Populus Rhizosphere	VLRASVEAPDEAAEGYPRTVDRIAELLYGRCAKQMEDAMCYAKDYRIFNDLKKAEDTQVVQERRAGLIARLLNVANGEKAKADKTPIKEVAPAK*
Ga0114129_102139054	3300009147	Populus Rhizosphere	MGHDGQLGTVDRIAELLYWWCARQMEDAMCYVKDYKVFDDQKKAEDSQVVQERRAGLIDRLLNAANKHGEKTKAEGTSVKEVAPAK*
Ga0114129_113057702	3300009147	Populus Rhizosphere	VLRASVEAPDEAAEGYPRTVDRIAELLYGRCAKQMEDAMCYAKDYRIFNDLKKAEDTQVVQERRAGLIARLLNAAKKHGEKIEAERTPAKEVASAK*
Ga0126374_108626841	3300009792	Tropical Forest Soil	MQEFREELGYDGQLGTVDRIAKLLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK*
Ga0126380_103701433	3300010043	Tropical Forest Soil	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQVEDAMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAE
Ga0126380_117578861	3300010043	Tropical Forest Soil	MAGCLRTVDRIAELIYGWCAQQMEDAMCYAKDYRFLDNQKKAEDTQVPQERRAGLIARLLNAANKQGEKTEAERTPAKEVAQAK*
Ga0126382_100086961	3300010047	Tropical Forest Soil	MMASCSQTVDRFAELLYGWCAQQMEDAMCCAKDCNLFDDEKKAEDTQVVKERRASLIDRLLNVANRHGEMAKADKTPVKEVAPA*
Ga0126382_101882082	3300010047	Tropical Forest Soil	LWSVEAPDKEAAEGYLRTVDRIAELLYGWCAKQMEDAMCYAKDYRLFSDLKKAEDTQVVQERRAGLIARLLNVANKHGEKAKADKTPIKEVAPAK*
Ga0126382_108707762	3300010047	Tropical Forest Soil	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQVEDAMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK*
Ga0126373_101966103	3300010048	Tropical Forest Soil	MQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK*
Ga0126378_107528012	3300010361	Tropical Forest Soil	MQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEETPVKDVAPAK*
Ga0126377_113207961	3300010362	Tropical Forest Soil	MMASCSQTVDRFAELLYGWCAQEMEDAMCYAKDYNLFDDEKKAEDTQVVKERRASLIDRLLNAANKQNAKTGAPVKEVAPAK*
Ga0126379_130313731	3300010366	Tropical Forest Soil	MQEFREELGHDGQLGTVDRIAELLYYWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPG
Ga0124850_10044242	3300010863	Tropical Forest Soil	MQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPAPVKDVAPAK*
Ga0153974_11013941	3300012180	Attine Ant Fungus Gardens	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCTPQMEDGMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKDGEKTRAEETPVKEVAPAK*
Ga0137382_106146252	3300012200	Vadose Zone Soil	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCASQMENVMCYERDSKIFEDRKKAEATRVVQERRTGLIDRLLNAANKHAEKTKAEETPAKEAAPAK*
Ga0137377_112257731	3300012211	Vadose Zone Soil	MQEFREELGHDGQLGTVDRIAELLYNWCAPQMEDAMCYAKDYKVFNDQKAEDTQVVQERRAGLINRLLNAANKPGEKTKAEGMPVKEVAPAK*
Ga0137370_104474992	3300012285	Vadose Zone Soil	MRPPAGLQLYSLEELGHDGQLATVDYAAELLYRWCASQMENVMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEETPVKEVAPAK*
Ga0137384_114553472	3300012357	Vadose Zone Soil	LSYWKESGTFERNAAACGLQLYSLEEFGHDGQLGTVDYAAELLYRWCAPQMEDVMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPV
Ga0137360_102423871	3300012361	Vadose Zone Soil	MDYTAELLYRWCAPQMEDVMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVSPAK*
Ga0126369_102509371	3300012971	Tropical Forest Soil	MQEFREELGYDGQLGTVDRIAELLYGWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK*
Ga0126369_112445661	3300012971	Tropical Forest Soil	MQEFREELGHDGQLGTVDRIAELLYYWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSEGTPVKEVAPAK*
Ga0132256_1006863931	3300015372	Arabidopsis Rhizosphere	MMASCSQTVDRFAELLYGWCAQQMEDAMCYAKDYNLFDDEKKAEDTQVVKERRTSLIDRLLNVANRHGEMAKADKTPVKEVAPA*
Ga0182036_102389861	3300016270	Soil	MQEFREELGHDGQLGVDRIAELLYCWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSEGTPVKEVAPAK
Ga0182037_101087621	3300016404	Soil	TVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0184611_10960041	3300018067	Groundwater Sediment	MRQRLVCMQEFREELGHDGQLGTVDRIAELLHCWCAPQMEDAMCYTRDYKVFDDQKKAEDTQVVQERRAGLIDRLLDAANKHGEKTKAEGTPVKEVAPAK
Ga0193693_10415061	3300019996	Soil	VAGDSVRMRQRLVCMQEFREELGHDGQLGTVDRIAELLHCWCAPQMEDAMCYTRDYKVFDDQKKAEDTQVVQERRAGLIDRLLDAANKHGEKTKAEGTPVKEVAPAK
Ga0207684_104645182	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LSKMRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWWASQMEDVMCYERDYKIFEDRKKAEATRVVQERRTGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0207700_119401492	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCASQMEDVMCYERDYKIFEDRKKAEATRVVQERRTGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0209647_10254113	3300026319	Grasslands Soil	LSEMWPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQMEDVMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0179587_111799982	3300026557	Vadose Zone Soil	HVAILLAVEHDGQLGTVDYGAELLYRWSASQMQMEDVMCYERDSKIFEDRKKAEATRVVQERRTGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0208991_12431891	3300027681	Forest Soil	RMRQRLVCMQEFREELGHDGQLGTVDRIAELLHCWCAPQMEDAMCYTRDYKVFDDQKKAEDTQVVQERRAGLIDRLLDAANKHGEKTKAEGTPVKEVAPAK
Ga0207428_113199121	3300027907	Populus Rhizosphere	DRIAELFYGWCAQQMEDAMCYAKDYRFFDDQKKAEVTRVVQERRAGLIARLLNAANKQGEKTEAEKPPVKGVAPAK
Ga0209526_101030873	3300028047	Forest Soil	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYCWCASQMEDVMCYERDYKIFEDRKKAEATRVVQERRTGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0307317_103449921	3300028720	Soil	VAGDSVRMRQRLGCMQEFREELGHDGQLGTVDRIAELLHCWCAPQMEDAMCYTRDYKVFDDQKKAEDTQVVQERRAGLIDRLLDAANKHGEKTKAEGTPVKEVAPAK
Ga0307312_109038561	3300028828	Soil	MQEFREELGHDGQLGTVDRIAELLHCWCAPQMEDAMCYTRDYKVFDDQKKAEDTQVVQERRAGLIDRLLDAANKHGEKTKAEGTPVKEVAPAK
Ga0307286_102150272	3300028876	Soil	LGHDGQLGTVDRIAELLHCWCAPQMEDAMCYTRDYKVFDDQKKAEDTQVVQERRAGLIDRLLDAANKHGEKTKAEGTPVKEVAPAK
Ga0318516_101672363	3300031543	Soil	MQEFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSEGTPVKEVAPAK
Ga0318538_101683981	3300031546	Soil	MQDFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK
Ga0318515_100698433	3300031572	Soil	GEGATRDSVRMRQRPACMQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK
Ga0318515_105586562	3300031572	Soil	EELGHNGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318542_100373281	3300031668	Soil	ELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318561_100520663	3300031679	Soil	REELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318574_100752181	3300031680	Soil	MQGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318574_101904572	3300031680	Soil	MQGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNTANRPGEKTKAEGTPVKEVAPAK
Ga0318560_103746052	3300031682	Soil	MTNTRKILIVDDDSELREALVEQELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK
Ga0318496_100853981	3300031713	Soil	GHNGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0306917_100212261	3300031719	Soil	GTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0306917_113439242	3300031719	Soil	LSEMRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQMEDAMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0318501_104916571	3300031736	Soil	QGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0306918_100203035	3300031744	Soil	AARDSVRMRQRPVCMQGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0306918_108292241	3300031744	Soil	FLIRARAVHDNLHAALVCMQGFREELGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318492_101333342	3300031748	Soil	TRDSVRMRQRPACMQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK
Ga0318492_104407791	3300031748	Soil	NGLYPKSRAFKGNRSGFMQEFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSEGTPVKEVAPAK
Ga0318494_100985761	3300031751	Soil	MQEFREELGHDGQLGTVDRIAELLYCWCAPQMDDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSEGTPVKEVAPAK
Ga0318535_105250291	3300031764	Soil	MQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLEDANKHGEKTKAEGTPVKDVAPAK
Ga0318509_105147311	3300031768	Soil	VDYAVELLYRWCFADGVMCYERDYKIFEDRTKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0318521_100786311	3300031770	Soil	MQGFREELGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318546_100557131	3300031771	Soil	VCMQGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318546_102654831	3300031771	Soil	VRMRQKPVCMQGFREELGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNTANKPGEKTKAEGTPVKEVAPAK
Ga0318546_108136771	3300031771	Soil	FREELGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318547_104486501	3300031781	Soil	GQLGTVDHIAELLYCWCAPRMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKAKAEGTPVKEVAPAK
Ga0318548_100327412	3300031793	Soil	MQGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNTANKPGEKTKAEGTPVKEVAPAK
Ga0318557_105112901	3300031795	Soil	VEQELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEETPVKDVAPAK
Ga0318523_101144142	3300031798	Soil	GTVDRAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318511_100126203	3300031845	Soil	GHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318527_103829681	3300031859	Soil	QGFREELGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318495_101330832	3300031860	Soil	FREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK
Ga0306919_113221331	3300031879	Soil	LSEMRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQMEDAMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPA
Ga0306925_108067581	3300031890	Soil	ELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK
Ga0306925_118433331	3300031890	Soil	GHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNTANRPGEKTKAEGTPVKEVAPAK
Ga0318522_100211542	3300031894	Soil	MQEFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSKGTPVKEVAPAK
Ga0318551_105167411	3300031896	Soil	ACKDFERGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0306923_108190061	3300031910	Soil	LGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0310909_100186697	3300031947	Soil	MQGFREELGHNGQLGTVDRAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0310909_103340352	3300031947	Soil	LGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0306926_107613511	3300031954	Soil	LGTVDYAAELLYRWCAPQMEDAMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0318562_103165762	3300032008	Soil	ELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK
Ga0310911_100561304	3300032035	Soil	MRPPAGLQLYSLEELGHDGQLGTVDYAAELLYRWCAPQMEDAMCYERDYKIFEDRKKAEATRVVQERRAGLIDRLLNAANKHGEKTRAEETPVKEVAPAK
Ga0318556_101203233	3300032043	Soil	VHDNLHAALVCMQGFREELGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318558_101733072	3300032044	Soil	EGATRDSVRMRQRPACMQEFREELGYDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYRIFEDRKKAEDTRVVQERRAGLIDRLLDDANKHGEKTKAEGTPVKDVAPAK
Ga0318532_100199871	3300032051	Soil	HNGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318506_100366771	3300032052	Soil	IVRLRQRPVYMQGFREELGHNGQLGTVDRAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318505_100338241	3300032060	Soil	TVDRAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318505_105410611	3300032060	Soil	VDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNTANRPGEKTKAEGTPVKEVAPAK
Ga0318504_104071411	3300032063	Soil	GLYPKSRAFKGNRSGFMQEFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSEGTPVKEVAPAK
Ga0318513_103986522	3300032065	Soil	FREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNTANRPGEKTKAEGTPVKEVAPAK
Ga0318514_101388102	3300032066	Soil	AAALVCMQGFREELGHDGQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318525_101142292	3300032089	Soil	LGHDGRLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0318525_102049702	3300032089	Soil	LGHDGQLGTVDRIAELLYCWCAPQMEDAMCYAKDYKVYDDQKKAEDTQIVQERRAGLIDRLLNAANKPGEKTKSEGTPVKEVAPAK
Ga0318577_100227421	3300032091	Soil	NGQLGTVDRAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0306920_1004060283	3300032261	Soil	GQLGTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNAANKPGEKTKAEGTPVKEVAPAK
Ga0310914_103758163	3300033289	Soil	GTVDRIAELLYCWCAPQMEDAMCYERDYKIFEDRKKAEDTRVVQERRAGLIDRLLNTANKPGEKTKAEGTPVKEVAPAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075606

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences