Metagenome Family F075540

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075540
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	88 residues
Representative Sequence	FRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Number of Associated Samples	69
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	8.47 %
% of genes near scaffold ends (potentially truncated)	94.07 %
% of genes from short scaffolds (< 2000 bps)	89.83 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.339 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.983 % of family members)
Environment Ontology (ENVO)	Unclassified (68.644 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.017 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.54% β-sheet: 20.69% Coil/Unstructured: 59.77%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00816	Histone_HNS	6.78
PF13643	DUF4145	3.39
PF00589	Phage_integrase	1.69
PF03401	TctC	0.85
PF13467	RHH_4	0.85
PF04352	ProQ	0.85
PF14347	DUF4399	0.85
PF10108	DNA_pol_B_exo2	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2916	DNA-binding protein H-NS	Transcription [K]	6.78
COG3109	sRNA-binding protein ProQ	Signal transduction mechanisms [T]	0.85
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
All Organisms	root	All Organisms	29.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
cellular organisms	root	All Organisms → cellular organisms	29.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.81 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.49 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.80 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.54 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.69 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Caryophyllales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Amaranthaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.69 %
Bosea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10055853	Not Available	1018	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10056916	Not Available	1007	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10076830	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	840	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1090525	Not Available	537	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10107750	Not Available	586	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10116021	Not Available	561	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10127317	Not Available	531	Open in IMG/M
3300005332\|Ga0066388_101673241	Not Available	1124	Open in IMG/M
3300005332\|Ga0066388_103403366	Not Available	812	Open in IMG/M
3300005332\|Ga0066388_107367793	Not Available	552	Open in IMG/M
3300005332\|Ga0066388_107420898	Not Available	550	Open in IMG/M
3300005332\|Ga0066388_108288800	Not Available	518	Open in IMG/M
3300005764\|Ga0066903_103326362	Not Available	868	Open in IMG/M
3300005764\|Ga0066903_103333245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300005764\|Ga0066903_103649439	Not Available	828	Open in IMG/M
3300005764\|Ga0066903_104388184	Not Available	753	Open in IMG/M
3300005764\|Ga0066903_104856724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300005764\|Ga0066903_104907330	Not Available	710	Open in IMG/M
3300005764\|Ga0066903_105652497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	658	Open in IMG/M
3300005764\|Ga0066903_106103453	Not Available	630	Open in IMG/M
3300005764\|Ga0066903_106715540	Not Available	598	Open in IMG/M
3300005764\|Ga0066903_107800028	Not Available	550	Open in IMG/M
3300005764\|Ga0066903_108338624	Not Available	529	Open in IMG/M
3300005764\|Ga0066903_108888281	Not Available	509	Open in IMG/M
3300010046\|Ga0126384_10919871	Not Available	791	Open in IMG/M
3300010358\|Ga0126370_11073715	Not Available	740	Open in IMG/M
3300010360\|Ga0126372_10972716	Not Available	858	Open in IMG/M
3300010360\|Ga0126372_11885938	Not Available	642	Open in IMG/M
3300010366\|Ga0126379_12645645	Not Available	599	Open in IMG/M
3300010376\|Ga0126381_102824107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300010376\|Ga0126381_103793773	Not Available	590	Open in IMG/M
3300010398\|Ga0126383_10695311	Not Available	1095	Open in IMG/M
3300010398\|Ga0126383_12916464	Not Available	559	Open in IMG/M
3300010863\|Ga0124850_1095441	Not Available	847	Open in IMG/M
3300012971\|Ga0126369_10600042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1171	Open in IMG/M
3300016294\|Ga0182041_11246096	Not Available	679	Open in IMG/M
3300016294\|Ga0182041_11959992	Not Available	545	Open in IMG/M
3300016319\|Ga0182033_10112004	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300016319\|Ga0182033_11075205	Not Available	718	Open in IMG/M
3300016341\|Ga0182035_11586950	Not Available	590	Open in IMG/M
3300016357\|Ga0182032_10536324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300016357\|Ga0182032_11771125	Not Available	539	Open in IMG/M
3300016371\|Ga0182034_11493413	Not Available	592	Open in IMG/M
3300016404\|Ga0182037_10137927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1820	Open in IMG/M
3300016422\|Ga0182039_10516366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300016445\|Ga0182038_10547325	Not Available	993	Open in IMG/M
3300016445\|Ga0182038_11568391	Not Available	592	Open in IMG/M
3300016445\|Ga0182038_11667761	Not Available	574	Open in IMG/M
3300016445\|Ga0182038_11755619	Not Available	560	Open in IMG/M
3300021560\|Ga0126371_10577309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1273	Open in IMG/M
3300021560\|Ga0126371_12395268	Not Available	638	Open in IMG/M
3300031543\|Ga0318516_10476398	Not Available	717	Open in IMG/M
3300031545\|Ga0318541_10439504	Not Available	729	Open in IMG/M
3300031545\|Ga0318541_10568394	Not Available	634	Open in IMG/M
3300031546\|Ga0318538_10589714	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300031549\|Ga0318571_10407438	Not Available	532	Open in IMG/M
3300031573\|Ga0310915_10058481	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300031573\|Ga0310915_10587520	Not Available	789	Open in IMG/M
3300031573\|Ga0310915_11301543	Not Available	500	Open in IMG/M
3300031668\|Ga0318542_10254734	Not Available	893	Open in IMG/M
3300031679\|Ga0318561_10358771	Not Available	799	Open in IMG/M
3300031681\|Ga0318572_10321282	Not Available	916	Open in IMG/M
3300031713\|Ga0318496_10438879	Not Available	722	Open in IMG/M
3300031724\|Ga0318500_10120583	Not Available	1211	Open in IMG/M
3300031744\|Ga0306918_10404703	Not Available	1063	Open in IMG/M
3300031744\|Ga0306918_10429352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1031	Open in IMG/M
3300031747\|Ga0318502_10258428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018	Open in IMG/M
3300031748\|Ga0318492_10258821	Not Available	900	Open in IMG/M
3300031768\|Ga0318509_10835091	Not Available	509	Open in IMG/M
3300031770\|Ga0318521_10728921	Not Available	603	Open in IMG/M
3300031771\|Ga0318546_10391089	Not Available	970	Open in IMG/M
3300031777\|Ga0318543_10576572	Not Available	504	Open in IMG/M
3300031780\|Ga0318508_1098007	Not Available	812	Open in IMG/M
3300031781\|Ga0318547_10662829	Not Available	648	Open in IMG/M
3300031781\|Ga0318547_10673965	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031794\|Ga0318503_10034626	Not Available	1494	Open in IMG/M
3300031821\|Ga0318567_10297903	Not Available	909	Open in IMG/M
3300031833\|Ga0310917_10427954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300031845\|Ga0318511_10159341	Not Available	990	Open in IMG/M
3300031845\|Ga0318511_10502921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300031879\|Ga0306919_10467195	Not Available	971	Open in IMG/M
3300031890\|Ga0306925_10021587	All Organisms → cellular organisms → Bacteria	6435	Open in IMG/M
3300031890\|Ga0306925_10040973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4788	Open in IMG/M
3300031890\|Ga0306925_10076609	All Organisms → cellular organisms → Bacteria → Proteobacteria	3528	Open in IMG/M
3300031894\|Ga0318522_10253640	Not Available	667	Open in IMG/M
3300031897\|Ga0318520_10237372	Not Available	1085	Open in IMG/M
3300031910\|Ga0306923_10135155	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300031912\|Ga0306921_10111079	All Organisms → cellular organisms → Bacteria	3185	Open in IMG/M
3300031912\|Ga0306921_12073395	Not Available	603	Open in IMG/M
3300031942\|Ga0310916_10289223	Not Available	1386	Open in IMG/M
3300031945\|Ga0310913_10032739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3318	Open in IMG/M
3300031945\|Ga0310913_11123584	Not Available	548	Open in IMG/M
3300031946\|Ga0310910_10378473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1120	Open in IMG/M
3300031947\|Ga0310909_10065091	All Organisms → cellular organisms → Bacteria	2846	Open in IMG/M
3300031947\|Ga0310909_10150930	Not Available	1910	Open in IMG/M
3300031947\|Ga0310909_10607429	Not Available	913	Open in IMG/M
3300031954\|Ga0306926_11552811	Not Available	761	Open in IMG/M
3300031954\|Ga0306926_12593598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031959\|Ga0318530_10451590	Not Available	533	Open in IMG/M
3300032001\|Ga0306922_12181707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300032001\|Ga0306922_12376587	Not Available	506	Open in IMG/M
3300032010\|Ga0318569_10504102	Not Available	564	Open in IMG/M
3300032025\|Ga0318507_10367869	Not Available	626	Open in IMG/M
3300032043\|Ga0318556_10756528	Not Available	505	Open in IMG/M
3300032044\|Ga0318558_10490246	Not Available	613	Open in IMG/M
3300032051\|Ga0318532_10231223	Not Available	656	Open in IMG/M
3300032055\|Ga0318575_10542964	Not Available	590	Open in IMG/M
3300032060\|Ga0318505_10381584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300032076\|Ga0306924_10016133	All Organisms → cellular organisms → Bacteria	7811	Open in IMG/M
3300032076\|Ga0306924_10157622	All Organisms → cellular organisms → Bacteria	2600	Open in IMG/M
3300032076\|Ga0306924_10745160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1096	Open in IMG/M
3300032076\|Ga0306924_11515385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	710	Open in IMG/M
3300032076\|Ga0306924_12622968	Not Available	502	Open in IMG/M
3300032090\|Ga0318518_10512080	Not Available	614	Open in IMG/M
3300032091\|Ga0318577_10218345	Not Available	912	Open in IMG/M
3300032261\|Ga0306920_100229889	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300032261\|Ga0306920_100673208	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300032261\|Ga0306920_101603996	Not Available	925	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.75%
Loam	Environmental → Terrestrial → Soil → Loam	15.25%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100558531	3300000597	Forest Soil	MATNPRCQAVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLLPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIDVTKRGANIH*
AF_2010_repII_A1DRAFT_100569161	3300000597	Forest Soil	QMKQVHWTLFLEYNPGQTIHNWTLFPWTGGDVSGGEPVPGGMVEGEGTASQIADQICIVVTKRGANIH*
AF_2010_repII_A1DRAFT_100768301	3300000597	Forest Soil	DGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDAAGGELVPGGMMEGEGTVSQIADQICIVVTKRGANVH*
AF_2010_repII_A100DRAFT_10905251	3300000655	Forest Soil	GKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH*
AF_2010_repII_A001DRAFT_101077501	3300000793	Forest Soil	MATNPRCQGVDVFRQNHPDYDSKINFNELAEQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEG
AF_2010_repII_A001DRAFT_101160212	3300000793	Forest Soil	ATNPRCQGVDVFRQNHPDYDGKINFNELADQLNQVHWTLFLEYNPGQTTHNWTLFPWTGGDASGGELVAGGMVEGEGTVSKIADQLCIVVTKGGANVH*
AF_2010_repII_A001DRAFT_101273171	3300000793	Forest Soil	YDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDAAGGELVPGGMMEGEGTVSQIADQICIVVTKRGANVH*
Ga0066388_1016732411	3300005332	Tropical Forest Soil	MATNPRCQGVDVFQQNHSDYDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRG
Ga0066388_1034033661	3300005332	Tropical Forest Soil	VFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVGGGELVFSGIVSGEGTVSQIADQICIVVTKRGASIQ*
Ga0066388_1073677932	3300005332	Tropical Forest Soil	QNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKRGANVH*
Ga0066388_1074208982	3300005332	Tropical Forest Soil	LADQMKQVHWTLFLEYNPGQTIHNWTLFPWTGGDVSGGEPVPGGMVEGEGTVSQIADQICIVVTKRGANIH*
Ga0066388_1082888001	3300005332	Tropical Forest Soil	MATNPRCQAVDVFRQNHPDYDGKINFDELVDQMKQVHWTLFLEYNPGQTRHNWTLFSWTGGDVSGGELVPGGMVEGEGTVSQIGEQICIIVTKRGANIH*
Ga0066903_1033263621	3300005764	Tropical Forest Soil	KINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGAVSGGELVPGGMVEGEGTVSQIADQICIVVTKRGANVH*
Ga0066903_1033332453	3300005764	Tropical Forest Soil	RKLENEVRSRMATNPRCQGVDVFRQNHPDYDSKINFDELADQMKQVHWTLFLEYNPGQITHNWTLIPWTGGDVSGGELVPGGLVEGEGTVSQIADQICIVVTKGGANIH*
Ga0066903_1036494391	3300005764	Tropical Forest Soil	CQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVGGGELVFSGIVSGEGTVSQIADQICIVVTKRGASIH*
Ga0066903_1043881843	3300005764	Tropical Forest Soil	VDVFRQNHPDYDSKINFNELAEQMKQVHWTLFLEYNPGQTAHNWTLFPWTGGDVSGGEPVPGGMVEGEGTVSQIADQICTVVTKRGANIH*
Ga0066903_1048567241	3300005764	Tropical Forest Soil	NYNELADQKKQVHWELFLEYNPGQTTHNWTLFPWTGGDAFGGELVRSGLVSGEGTVSEIADQVCIVVTKGGASIH*
Ga0066903_1049073301	3300005764	Tropical Forest Soil	FNELADQLKQVHWTLFLEYNPGRTTHNWTLFPWTGGDVSGGELVAGGLVEGEGTVSQIADQICIVVTKGGANVH*
Ga0066903_1056524972	3300005764	Tropical Forest Soil	LKQVHWTLFLEYNPGQATHNWTLFPWTGGSVSGGELVRSGLVSGEGTVSQIADQICTVVMKRGASIH*
Ga0066903_1061034532	3300005764	Tropical Forest Soil	LADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGEPVPGGMVEGEGTVSQIADQICTVVTKRGANVH*
Ga0066903_1067155401	3300005764	Tropical Forest Soil	LADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKRGANIH*
Ga0066903_1078000281	3300005764	Tropical Forest Soil	DYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGVNIH*
Ga0066903_1083386241	3300005764	Tropical Forest Soil	VDVFRQNHPDYDGKINFNELADQMKQVHWTLFLEYNPGQTIHNWTLFPWTGGDVSGGEPVPGGMVEGEGTVSQIADQICIVVTKRGANIH*
Ga0066903_1088882812	3300005764	Tropical Forest Soil	GKINFNELADQLKQVHWTLFLEYNPGQTAHNWTLFPWTGGDVSGGELVAGGLVEGEGTVSQIADQICIVVTKGGANVH*
Ga0126384_109198712	3300010046	Tropical Forest Soil	MATNPRCQGVDVFQQNHSDYDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVITKRGANIH*
Ga0126370_110737151	3300010358	Tropical Forest Soil	MATNPRCQGVDVFQQNHSDYDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTV
Ga0126372_109727161	3300010360	Tropical Forest Soil	MATNPRCQGVDVFQQNHSDYDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPWTGGDVSGGELVAGGLVEGEGTVSQIADQICI
Ga0126372_118859381	3300010360	Tropical Forest Soil	HVESDSPPSGNRPRVTISGTRYNPRCQGVDVFRQSHPDYDGKTNFNELADQLKQVHWTLFLEYNPGQTTYNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKRGANVH*
Ga0126379_126456451	3300010366	Tropical Forest Soil	NHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH*
Ga0126381_1028241072	3300010376	Tropical Forest Soil	DVFRQSHPDYDGKINFNELADQLKQVHWTLFLEYNPGQTAHNWTLFPWTGGDVSGGELVAGGLVEGEGTVSQIADQICIVVTKGGANVH*
Ga0126381_1037937731	3300010376	Tropical Forest Soil	MATNPRCQGVDVFRQNHPDYDSKINFNELAEQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKCPSENILNPLNRL*
Ga0126383_106953113	3300010398	Tropical Forest Soil	MATNPRCQGVDVFQQNHSDYDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH*
Ga0126383_129164641	3300010398	Tropical Forest Soil	FRQNHPDYDGKINFDELADQMKQVHWTVFLEYNPGQTTHNWTLLPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIDVTKRGANIH*
Ga0124850_10954413	3300010863	Tropical Forest Soil	GRKFENEVRSQMATNPRCQGVDVFRQSHPDYDGKTNFNELADQLKQVHWTLFLEYNPGQTTYNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKRGANVH*
Ga0126369_106000421	3300012971	Tropical Forest Soil	GKINFNELADQLKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVGGGLVEGEGTVSQIADQICTVVTKRGANVH*
Ga0182041_112460961	3300016294	Soil	VRSGMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFLWTAGDVSGGELVPSGMVQGEGTVSQIADQVCTVVTKRGANIH
Ga0182041_119599921	3300016294	Soil	VRSRMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQIHWTLFLEYNPGQTIHNWTLFRWTGGDVSGGELVAGGMVEGEGTVSQIADQICIVVTKRGANIH
Ga0182033_101120041	3300016319	Soil	DELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSLIADQICTVVTKRGANIH
Ga0182033_110752051	3300016319	Soil	EVRSGMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFLWTGGDVSGGELVPSGMVEGEGTVSQIADQVCTVVTKRGANIH
Ga0182035_115869502	3300016341	Soil	VDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0182032_105363241	3300016357	Soil	QMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0182032_117711251	3300016357	Soil	HPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0182034_114934131	3300016371	Soil	QGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0182037_101379271	3300016404	Soil	INFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0182039_105163661	3300016422	Soil	RQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0182038_105473251	3300016445	Soil	YDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0182038_115683911	3300016445	Soil	MATNPHCQGVDVFRLNDYHYDDKANFDELADQMKQVHWTLSLEYNPGQTTHNWTLFPWTGGNEFGGELVKGGMVSGEGSVSQIADQICIVVTKRGANVH
Ga0182038_116677612	3300016445	Soil	ENEVRDRMATNPRCQGVDVFRQNYYRYDDKDNFDELADQKKQAHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVKGGMVSGEGTVSQIADQILHRRH
Ga0182038_117556192	3300016445	Soil	RQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0126371_105773092	3300021560	Tropical Forest Soil	MATNPRCQGADIFRQNDNDYDGKDNYNELADQKKQVHWELFLEYNPGQTTHNWTLFPWTGGDAFGGELVRSGLVSGEGTVSEIADQVCIVVTKGGASIH
Ga0126371_123952681	3300021560	Tropical Forest Soil	MATNPRCQGVDVFRQNHPDYDSKINFNELAEQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKRGANIH
Ga0318516_104763981	3300031543	Soil	PDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0318541_104395041	3300031545	Soil	NHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318541_105683941	3300031545	Soil	FDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0318538_105897141	3300031546	Soil	NNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH
Ga0318571_104074381	3300031549	Soil	LADQMKQVHWTLFLEYNPGQTTHNWTLFLWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0310915_100584816	3300031573	Soil	GKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSLIADQICTVVTKRGANIH
Ga0310915_105875201	3300031573	Soil	CQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0310915_113015432	3300031573	Soil	VHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0318542_102547341	3300031668	Soil	DYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318561_103587713	3300031679	Soil	MATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318572_103212821	3300031681	Soil	CQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0318496_104388792	3300031713	Soil	PRCQSVDVFRQNHPDYDGKINFNELADQLKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0318500_101205833	3300031724	Soil	INFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0306918_104047032	3300031744	Soil	QGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0306918_104293521	3300031744	Soil	YDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0318502_102584281	3300031747	Soil	QGVDVFRQNHPDYDGKINFNELADQMKQVHWTLFLEYNPGQTIHNWTLFPWTGGDVSGGEPVPGGMVEGEGTVSQIADQICIVVTKRGANIH
Ga0318492_102588212	3300031748	Soil	SGMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFLWTGGDVSGGELVPSGMVEGEGTVSQIADQVCTVVTKRGANIH
Ga0318509_108350912	3300031768	Soil	KQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318521_107289211	3300031770	Soil	FRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318546_103910891	3300031771	Soil	NHPDYDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0318543_105765721	3300031777	Soil	NEVRSQMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318508_10980072	3300031780	Soil	RKLENEVRSQMATNPRCQGVDVFRQNHPDYAGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0318547_106628292	3300031781	Soil	CKFVGDGRNLGRKLENEVRSRMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318547_106739652	3300031781	Soil	KINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSLIADQICTVVTKRGANIH
Ga0318503_100346263	3300031794	Soil	QNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0318567_102979032	3300031821	Soil	VGDGRNLGRKLENEVRSGMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0310917_104279542	3300031833	Soil	HPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0318511_101593413	3300031845	Soil	EVRSQMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPD
Ga0318511_105029212	3300031845	Soil	NPRCQGVDVFRQNHPDYDGKINFNELADQMKQVHWTLFLEYNPGQTIHNWTLFPWTGGDVSGGEPVPGGMVEGEGTVSQIADQICIVVTKRGANIH
Ga0306919_104671953	3300031879	Soil	GMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFLWTAGDVSGGELVPSGMVQGEGTVSQIADQVCTVVTKRGANIH
Ga0306925_100215871	3300031890	Soil	GVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0306925_100409731	3300031890	Soil	NHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSLIADQICTVVTKRGANIH
Ga0306925_100766095	3300031890	Soil	DYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0318522_102536401	3300031894	Soil	MATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFLWTAGDVSGGELVPSGMVQGEGTVSQIADQVCTVVTKRGANIH
Ga0318520_102373722	3300031897	Soil	MATNPRCQGVDVFQQNHSDYDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH
Ga0306923_101351551	3300031910	Soil	HPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSLIADQICTVVTKRGANIH
Ga0306921_101110791	3300031912	Soil	NFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSLIADQICTVVTKRGANIH
Ga0306921_120733952	3300031912	Soil	EVRSRMATNPRCQGVDVFQQNHSDCDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH
Ga0310916_102892232	3300031942	Soil	GRNLGRKLENEVRSRMATNPRCQGVDVFQQNHSDYDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH
Ga0310913_100327396	3300031945	Soil	NPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFLWTGGDVSGGELVPSGMVEGEGTVSQIADQVCTVVTKRGANIH
Ga0310913_111235841	3300031945	Soil	RMATNPRCQGVDVFRLNDYHYDDKANFDELADQMKQVHWTLSLEYNPGQTTHNWTLFPWTGGNEFGAELVKGGMVSGEGSVSQIADQICIVVTKRGANVH
Ga0310910_103784733	3300031946	Soil	ELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0310909_100650916	3300031947	Soil	DGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0310909_101509301	3300031947	Soil	NFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0310909_106074292	3300031947	Soil	DGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH
Ga0306926_115528111	3300031954	Soil	GKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0306926_125935982	3300031954	Soil	FENEVRSGMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQIHWTLFLEYNPGQTIHNWTLFRWTGGDVSGGELVAGGMVEGEGTVSQIADQICMVATKRGANIQ
Ga0318530_104515902	3300031959	Soil	DVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0306922_121817071	3300032001	Soil	NELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH
Ga0306922_123765871	3300032001	Soil	RMATNARCQGVDVFRLNDYHYDDKANFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGNEFGGELVKGGMVSGEGSVSQIADQICIVVTKRGANVH
Ga0318569_105041022	3300032010	Soil	YDGKNNFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVFSGIVSGEGTVSQIADQICTVVTKRGANIH
Ga0318507_103678692	3300032025	Soil	TNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318556_107565282	3300032043	Soil	GDGRQLGRKLENEVRSGMATNPRCQGVDVFRQNHPDYDGKINFNELADQMKQVHWTLFLEYNPGQTIHNWTLFPWTGGDVSGGEPVPGGMVEGEGTVSRIADQICIVVTKRGANIH
Ga0318558_104902462	3300032044	Soil	NFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0318532_102312231	3300032051	Soil	FRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318575_105429641	3300032055	Soil	NEVRSRMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318505_103815843	3300032060	Soil	INFNELADQMKQGHWTLFLEYNPGQTIHNWTLFPWTGGDVSGGEPVPGGMVEGEGTVSQIADQICIVVTKRGANIH
Ga0306924_100161331	3300032076	Soil	FRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQATHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIPDQICTVVTKRGANIH
Ga0306924_101576226	3300032076	Soil	YDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSLIADQICTVVTKRGANIH
Ga0306924_107451603	3300032076	Soil	FRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICIVVTKAGRKRPLGPH
Ga0306924_115153852	3300032076	Soil	QGVDVFQQNHSDYDGKNNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH
Ga0306924_126229681	3300032076	Soil	EVRSRMATNPRCQGVDVFRQNHPDYDSKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLIPWTGGDVSGGELVPGGLVEGEGTVSQIADQICIVVTKGGANVH
Ga0318518_105120801	3300032090	Soil	PDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIADQICTVVTKRGANIH
Ga0318577_102183451	3300032091	Soil	NEVRSGMATNPRCQGVDVFRQNHPDYDGKINFDELADQMKQVHWTLFLEYNPGQTTHNWTLFLWTGGDVSGGELVPSGMVEGEGTVSQIADQVCTVVTKRGANIH
Ga0306920_1002298896	3300032261	Soil	INFDELADQMKQVHWTLFLEYNPGQTTHNWTLFPWAGGDVSGGELVPGGMVEGEGTVSLIADQICTVVTKRGANIH
Ga0306920_1006732083	3300032261	Soil	PDYDGKINFNELADQLKQVHWTLFLEYNPGQTTHNWTLFPWTGGDVSGGELVPGGMVEGEGTVSQIAEQICTVVTKRGASIH
Ga0306920_1016039961	3300032261	Soil	NEVTSRMATSPRCQGVDVFRQNHPGYDGNFNELADQMKQVHWDLYLDYNPGQTTHNWTLFPKTGGVSGGELVINGIVEGEGTVSQIADQICIVVTKRGANIH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075540

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences