NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F075539

Metagenome Family F075539

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075539
Family Type Metagenome
Number of Sequences 118
Average Sequence Length 43 residues
Representative Sequence TLFREFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Number of Associated Samples 71
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 6.96 %
% of genes near scaffold ends (potentially truncated) 91.53 %
% of genes from short scaffolds (< 2000 bps) 87.29 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.949 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(32.203 % of family members)
Environment Ontology (ENVO) Unclassified
(57.627 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.322 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.17%    β-sheet: 0.00%    Coil/Unstructured: 45.83%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.25.1.1: Ferritind2fzfa12fzf0.93603
a.24.16.0: automated matchesd1wola_1wol0.93503
f.14.1.4: TRPM-like (melastatin-like transient receptor potential) channelsd6bcoa26bco0.9312
a.118.7.1: 14-3-3 proteind3efza13efz0.92427
a.25.1.9: Rv2844-liked2ib0a12ib00.92251


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF01471PG_binding_1 2.54
PF00196GerE 2.54
PF01168Ala_racemase_N 1.69
PF03060NMO 1.69
PF00027cNMP_binding 1.69
PF13378MR_MLE_C 0.85
PF10686YAcAr 0.85
PF12697Abhydrolase_6 0.85
PF13505OMP_b-brl 0.85
PF02518HATPase_c 0.85
PF17158MASE4 0.85
PF04828GFA 0.85
PF14397ATPgrasp_ST 0.85
PF09361Phasin_2 0.85
PF00589Phage_integrase 0.85
PF08308PEGA 0.85
PF04226Transgly_assoc 0.85
PF00486Trans_reg_C 0.85
PF07345DUF1476 0.85
PF12263DUF3611 0.85
PF04392ABC_sub_bind 0.85
PF01144CoA_trans 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG0516IMP dehydrogenase/GMP reductaseNucleotide transport and metabolism [F] 1.69
COG2070NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase familyGeneral function prediction only [R] 1.69
COG1788Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunitLipid transport and metabolism [I] 0.85
COG2057Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunitLipid transport and metabolism [I] 0.85
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 0.85
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.85
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.85
COG4670Acyl CoA:acetate/3-ketoacid CoA transferaseLipid transport and metabolism [I] 0.85


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.95 %
All OrganismsrootAll Organisms33.05 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005332|Ga0066388_102127664Not Available1010Open in IMG/M
3300005332|Ga0066388_103369655All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria816Open in IMG/M
3300005764|Ga0066903_100873332All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1622Open in IMG/M
3300005764|Ga0066903_101327969Not Available1345Open in IMG/M
3300005764|Ga0066903_102860264Not Available936Open in IMG/M
3300005764|Ga0066903_103158457Not Available891Open in IMG/M
3300005764|Ga0066903_103335212All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium867Open in IMG/M
3300005764|Ga0066903_105286997Not Available682Open in IMG/M
3300005764|Ga0066903_107797550Not Available550Open in IMG/M
3300006059|Ga0075017_100242182Not Available1317Open in IMG/M
3300010047|Ga0126382_10650692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales876Open in IMG/M
3300010048|Ga0126373_10152140Not Available2200Open in IMG/M
3300010048|Ga0126373_11206807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 12-66-6823Open in IMG/M
3300010358|Ga0126370_11203356Not Available705Open in IMG/M
3300010359|Ga0126376_10874184Not Available886Open in IMG/M
3300010360|Ga0126372_11769559Not Available661Open in IMG/M
3300010360|Ga0126372_12211701Not Available599Open in IMG/M
3300010366|Ga0126379_11243645All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales851Open in IMG/M
3300010366|Ga0126379_11864323Not Available705Open in IMG/M
3300010376|Ga0126381_104575927Not Available533Open in IMG/M
3300010376|Ga0126381_104975606Not Available510Open in IMG/M
3300012971|Ga0126369_13222006Not Available534Open in IMG/M
3300016270|Ga0182036_10805146Not Available766Open in IMG/M
3300016294|Ga0182041_10024958All Organisms → cellular organisms → Bacteria3729Open in IMG/M
3300016294|Ga0182041_10396244All Organisms → cellular organisms → Bacteria → Proteobacteria1173Open in IMG/M
3300016294|Ga0182041_11547752Not Available611Open in IMG/M
3300016294|Ga0182041_11794807Not Available569Open in IMG/M
3300016294|Ga0182041_12303502All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense504Open in IMG/M
3300016319|Ga0182033_10463980Not Available1082Open in IMG/M
3300016341|Ga0182035_10837137Not Available809Open in IMG/M
3300016341|Ga0182035_11237477Not Available667Open in IMG/M
3300016341|Ga0182035_11920988Not Available537Open in IMG/M
3300016357|Ga0182032_10460556Not Available1039Open in IMG/M
3300016357|Ga0182032_11318771Not Available623Open in IMG/M
3300016371|Ga0182034_11324850Not Available628Open in IMG/M
3300016387|Ga0182040_10697188Not Available830Open in IMG/M
3300016404|Ga0182037_10435457Not Available1087Open in IMG/M
3300016404|Ga0182037_11380981Not Available622Open in IMG/M
3300016404|Ga0182037_11731332Not Available557Open in IMG/M
3300016422|Ga0182039_10407123Not Available1156Open in IMG/M
3300016422|Ga0182039_10880675Not Available798Open in IMG/M
3300016422|Ga0182039_11378096Not Available640Open in IMG/M
3300016445|Ga0182038_10324347All Organisms → cellular organisms → Bacteria → Proteobacteria1267Open in IMG/M
3300016445|Ga0182038_11802776Not Available552Open in IMG/M
3300016445|Ga0182038_11964810Not Available529Open in IMG/M
3300017822|Ga0187802_10008836All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3196Open in IMG/M
3300017822|Ga0187802_10319190Not Available607Open in IMG/M
3300017924|Ga0187820_1302512Not Available527Open in IMG/M
3300017930|Ga0187825_10415454Not Available519Open in IMG/M
3300017932|Ga0187814_10258070All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus662Open in IMG/M
3300017943|Ga0187819_10017400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4145Open in IMG/M
3300017955|Ga0187817_10000742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales14619Open in IMG/M
3300017955|Ga0187817_10857876Not Available580Open in IMG/M
3300017993|Ga0187823_10123891Not Available794Open in IMG/M
3300017993|Ga0187823_10315875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales547Open in IMG/M
3300018001|Ga0187815_10124080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1091Open in IMG/M
3300018001|Ga0187815_10403666All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium582Open in IMG/M
3300021168|Ga0210406_10794189Not Available721Open in IMG/M
3300021560|Ga0126371_11555340Not Available788Open in IMG/M
3300021560|Ga0126371_13607885Not Available522Open in IMG/M
3300021560|Ga0126371_13697403Not Available516Open in IMG/M
3300025905|Ga0207685_10322117All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300025915|Ga0207693_11291114Not Available546Open in IMG/M
3300026898|Ga0207788_1005296All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300026909|Ga0207858_1014816Not Available759Open in IMG/M
3300026990|Ga0207824_1015781All Organisms → cellular organisms → Bacteria → Proteobacteria811Open in IMG/M
3300027010|Ga0207839_1015137All Organisms → cellular organisms → Bacteria → Proteobacteria887Open in IMG/M
3300027090|Ga0208604_1020418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria629Open in IMG/M
3300027090|Ga0208604_1029390Not Available517Open in IMG/M
3300031057|Ga0170834_101209929Not Available569Open in IMG/M
3300031668|Ga0318542_10425192Not Available687Open in IMG/M
3300031680|Ga0318574_10554885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria673Open in IMG/M
3300031681|Ga0318572_10904383Not Available524Open in IMG/M
3300031736|Ga0318501_10366827All Organisms → cellular organisms → Bacteria → Proteobacteria775Open in IMG/M
3300031744|Ga0306918_10881838All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300031747|Ga0318502_10683843Not Available620Open in IMG/M
3300031747|Ga0318502_10953449Not Available522Open in IMG/M
3300031753|Ga0307477_10146042All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300031754|Ga0307475_10856506Not Available719Open in IMG/M
3300031768|Ga0318509_10224415Not Available1047Open in IMG/M
3300031768|Ga0318509_10367023All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300031777|Ga0318543_10243185Not Available802Open in IMG/M
3300031781|Ga0318547_10047443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2299Open in IMG/M
3300031795|Ga0318557_10229104Not Available850Open in IMG/M
3300031846|Ga0318512_10215004Not Available943Open in IMG/M
3300031896|Ga0318551_10800625Not Available548Open in IMG/M
3300031910|Ga0306923_10270536All Organisms → cellular organisms → Bacteria1943Open in IMG/M
3300031910|Ga0306923_10496726All Organisms → cellular organisms → Bacteria → Proteobacteria1380Open in IMG/M
3300031941|Ga0310912_11380996Not Available532Open in IMG/M
3300031942|Ga0310916_10655316Not Available890Open in IMG/M
3300031942|Ga0310916_11737369Not Available504Open in IMG/M
3300031945|Ga0310913_10936950All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium608Open in IMG/M
3300031946|Ga0310910_10301326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1261Open in IMG/M
3300031954|Ga0306926_10609197Not Available1333Open in IMG/M
3300031959|Ga0318530_10351127Not Available611Open in IMG/M
3300032001|Ga0306922_10198825All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2151Open in IMG/M
3300032001|Ga0306922_10335448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1622Open in IMG/M
3300032035|Ga0310911_10145327Not Available1331Open in IMG/M
3300032043|Ga0318556_10508695Not Available630Open in IMG/M
3300032051|Ga0318532_10005381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3725Open in IMG/M
3300032055|Ga0318575_10683999Not Available519Open in IMG/M
3300032059|Ga0318533_10591540Not Available814Open in IMG/M
3300032059|Ga0318533_11075508Not Available589Open in IMG/M
3300032076|Ga0306924_10199665All Organisms → cellular organisms → Bacteria2296Open in IMG/M
3300032076|Ga0306924_11978685Not Available601Open in IMG/M
3300032076|Ga0306924_11990242Not Available599Open in IMG/M
3300032261|Ga0306920_100278497Not Available2493Open in IMG/M
3300032261|Ga0306920_100307500All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei2360Open in IMG/M
3300032261|Ga0306920_100408344All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_72019Open in IMG/M
3300032261|Ga0306920_102921315Not Available647Open in IMG/M
3300033289|Ga0310914_10886522Not Available791Open in IMG/M
3300033289|Ga0310914_11305170Not Available628Open in IMG/M
3300033289|Ga0310914_11438381Not Available592Open in IMG/M
3300033289|Ga0310914_11813471All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria514Open in IMG/M
3300033290|Ga0318519_10494628Not Available736Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil32.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil26.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil13.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil11.02%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment10.17%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.69%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.69%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.85%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026898Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)EnvironmentalOpen in IMG/M
3300026909Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)EnvironmentalOpen in IMG/M
3300026990Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)EnvironmentalOpen in IMG/M
3300027010Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)EnvironmentalOpen in IMG/M
3300027090Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066388_10212766433300005332Tropical Forest SoilPSMLFREFAAECMELAQTTSSPEKHALYVKMACVWFQMAQRWEKKS*
Ga0066388_10336965513300005332Tropical Forest SoilEFAAECIELAQTNTSPEKRALYMKMAAMWHQMAQRWEKKS*
Ga0066903_10087333223300005764Tropical Forest SoilLSLPTLFREFAAECMELAQTTPTPEKRALYMKMASLWHQMAQRWEKKG*
Ga0066903_10132796933300005764Tropical Forest SoilMLFREFAAECMELAQTTPEKRTLYMKMASVWHQMALRWEKKG*
Ga0066903_10286026433300005764Tropical Forest SoilPTLFREFAAECMELAQTTPTPEKRLLYLKMASVWHQMAQRSEKKG*
Ga0066903_10315845713300005764Tropical Forest SoilTLFREFAAECVELAQTNPSPEKRALYMQMSSMWHQIAQRWEKKDQPS*
Ga0066903_10333521223300005764Tropical Forest SoilFREFAAECIELAQTASSPAKHALYTRMASAWHQLAQRWEKRSQTSP*
Ga0066903_10528699733300005764Tropical Forest SoilEPSTLFREFAAECMELAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP*
Ga0066903_10779755023300005764Tropical Forest SoilEPSTLFREFAAECMELAQTAPTPEKRTLYLKMASVWHQMVQRWEKKASPSVAP*
Ga0075017_10024218243300006059WatershedsMLFREFAAECMELAQTASSPEKHVMYLKMASVWFQMAQRWEKK*
Ga0126382_1065069213300010047Tropical Forest SoilMSPRANPSTLAREFAAECMELAENTLSPEKRAIYLKMASVWHQMAIRS
Ga0126373_1015214063300010048Tropical Forest SoilEFAAECAQLAQATPTPEKRGLYLRMASVWHQMALRWEKKS*
Ga0126373_1120680723300010048Tropical Forest SoilAAECTELAQTIPEKRALYLIMASVWHQMAQRWEKKN*
Ga0126370_1120335613300010358Tropical Forest SoilDPSTLFREFAAECAELAQGSPSPEKRTLYLKMASVWHQMALRWERKG*
Ga0126376_1087418423300010359Tropical Forest SoilLVPSTLFREFAAECMELAQTTPTPEKRALYLKMASVMHQMAQRWEKKG*
Ga0126372_1176955913300010360Tropical Forest SoilDCEPSTLFREFAAECAQLAQTAPTHEKRTLYMRMASVWHQMALRWEEKG*
Ga0126372_1221170113300010360Tropical Forest SoilAELAQGTPSLEKRTLYLKMASVWHQMAFRWERKG*
Ga0126379_1124364513300010366Tropical Forest SoilAECMELAKTKSSPEKRALYLKMASVWHQMAQRWEKKSQLSP*
Ga0126379_1186432313300010366Tropical Forest SoilEPSTLFREFAAECMELAQTTPTPEKRSLYMKMASLWHRMAQRWEKKG*
Ga0126379_1249887813300010366Tropical Forest SoilREFATECLELAQTTSTPEKRRLFLKMASVWHQMAPRWERRS*
Ga0126381_10457592713300010376Tropical Forest SoilPTLFREFAAECMGLAQTTPTPEKRALYLKMASVWHQMAQRLEKPSIG*
Ga0126381_10497560613300010376Tropical Forest SoilIELAQTASSPEKHALYLKMARVWFQMAQRWEKKS*
Ga0126369_1322200613300012971Tropical Forest SoilLFREFAAECMELAQATPTPQKRALYVRMASVWYQMALRWEKKG*
Ga0182036_1080514613300016270SoilLFREFAAECMELAQTTPTPEKRALYLKMARVWHQMAQRSEKKGRGVDRRRTY
Ga0182041_1002495813300016294SoilECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0182041_1039624433300016294SoilEPSTLFREFAAECMELAQTTPTPEKRSLYMKMASLWHRMAQRWEKKG
Ga0182041_1074475513300016294SoilREFASECTQLAQTAPTPEKRALYMRMASVWHQMAVRWEKKG
Ga0182041_1154775223300016294SoilLFREFAAECAELAQGTPSPEKRTLYLKMASVWHQMALRWEKKG
Ga0182041_1179480713300016294SoilECMELAQTKSSPEKRALYLKMASVWHQMAQRWEKKSQPSP
Ga0182041_1230350223300016294SoilCEPSTLFREFAAECIELAQTVSSPSKHALYMKMASVWHQMAQRWENKNQPSP
Ga0182033_1046398023300016319SoilFAAECAELAQGTPSPEKRTLYLKMASVWHQMALRWEKKG
Ga0182035_1083713753300016341SoilFAAECMELAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP
Ga0182035_1123747713300016341SoilEPSMLFREFAAECAELAQGTPSPEKRTLYLKMASVWHQMALRWEKKG
Ga0182035_1192098823300016341SoilELSQTKSSPEKRALYLKMASVWHQMEKRWEKKRQPSP
Ga0182032_1046055633300016357SoilREFAAECAELAQDTPSSEKRTLYLKMACVWHQMALRWERKG
Ga0182032_1131877113300016357SoilQFACECVELAQSTPLPEKRALYMKMASVWHQMALRWEKKG
Ga0182034_1132485013300016371SoilREFAAECIELAQTASSPEKHALYMKMASVWHQIAQRWEEKS
Ga0182040_1069718813300016387SoilFAAECMELAKTKSSPEKRALYLKMASVWHQMAQRWETKSQPSP
Ga0182037_1043545733300016404SoilFREFAAECMELAQTASSPEKHALYLKMASVWFQMAQRWEKKS
Ga0182037_1138098113300016404SoilGCQPSTLFREFAAECIELARTASSPEKHALYMKMASVWHQIAQRWEEKS
Ga0182037_1173133213300016404SoilFAAECAELARDTPSSEKRTLYLKMASVWHHMALRWERKG
Ga0182039_1040712333300016422SoilFREFAAECMELAQTKSSPEKRALYLKMASVWHQMAQRWEKKSQPSP
Ga0182039_1088067523300016422SoilLFRQFACECVELAQSTPLPEKRALYMKMASVWHQMALRWEKKG
Ga0182039_1137809623300016422SoilFASECVELAQSTPLPEKRTLYMKMASVWHQMALRWETKG
Ga0182038_1032434713300016445SoilLFREFAAECIELAQTNPSPGKRALYMKMAGMWHQMAQRWETKG
Ga0182038_1180277613300016445SoilECMELAQTKSSPEKRALYLKMASVWHQMAQRWEKKSQASP
Ga0182038_1196481013300016445SoilSTLFREFAAECMELAKTKSSPEKRALYLKMASVWHQMAQRWETKSQPSP
Ga0187802_1000883613300017822Freshwater SedimentREFAAECMELAQTVPSHEKRALYLKMASVWHQMAQRWEKKS
Ga0187802_1031919023300017822Freshwater SedimentFAAECMELAQTNPSPKKRALYLKMASVWHQMAQRWEKKS
Ga0187820_130251213300017924Freshwater SedimentAECMELAQTASSPEKHVMYLKMASVWFQMAQRWEKK
Ga0187825_1041545423300017930Freshwater SedimentFREFAAECMELAQTNPSHEKRALYLKMASVWHHMAQRWEKKG
Ga0187814_1025807013300017932Freshwater SedimentREFAAECMELAQTIPSHEKRALYLKMASVWHHTAQRWEKKG
Ga0187819_1001740063300017943Freshwater SedimentNPPALFREFAAECMELARTVPSHEKRALYLKMASVWHQMAQRWEKKS
Ga0187817_1000074213300017955Freshwater SedimentREFAAECMELAQTVPSHEKRALYLKMASVWHQMARRWEKKS
Ga0187817_1085787613300017955Freshwater SedimentTLFREFAAECMELAQTVPSHEKRALYLKIASVWHQMAQRWEKKS
Ga0187823_1012389123300017993Freshwater SedimentLFREFAAECMELAQTVPSHEKRALYLKMASVWHQMARRWEKKS
Ga0187823_1031587513300017993Freshwater SedimentFREFAAECTELAQTIPSHEKRALYVEMASVWYHMAQRWEKKV
Ga0187815_1012408023300018001Freshwater SedimentLFREFAAECMELAQTVPSHEKRALYLKIASVWHQMAQRWEKKS
Ga0187815_1040366613300018001Freshwater SedimentTLFREFAAECMELAQTVPSHEKRALYLKMASVWHQMAQRWEKKS
Ga0210406_1079418913300021168SoilEGCQPSTLFRQFAAECIELAQTASLPEKHALYLKMASVWHQMAQRWEKKN
Ga0126371_1155534033300021560Tropical Forest SoilEPSTLFREFAAECMELAQTTPTPEKRALYMKMASLWHQMAQRWEKKS
Ga0126371_1360788513300021560Tropical Forest SoilRDFAAECIELAQTASSNEKRALYTKMASVWHQMAQRWEKKSQPSP
Ga0126371_1369740313300021560Tropical Forest SoilDREPSTVFREFAAECTQLAKAAPTPDKRAHLRMASVWHQMAVRWEKKG
Ga0207685_1032211713300025905Corn, Switchgrass And Miscanthus RhizosphereLFREFAAECMELAQTVSSPEKHALYLKMASVWHRMAQRWEKKS
Ga0207693_1129111413300025915Corn, Switchgrass And Miscanthus RhizosphereEPSTLFRQFAAECMELAQTASSPEKHALYLKMASVWFQMAQRWEKVSD
Ga0207788_100529623300026898Tropical Forest SoilLNPRTLFREFAAECMELAQTTPTPEKRLLYLKMARLWHQIAQRWEKKG
Ga0207858_101481633300026909Tropical Forest SoilPSTLFREFAAECMELAQTAPTPKKRTLYMRMASVWHQMALRWEKKNSPSVTP
Ga0207824_101578113300026990Tropical Forest SoilSILFREFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Ga0207839_101513723300027010Tropical Forest SoilFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Ga0208604_102041823300027090Forest SoilEFAAECMELAQTIPSHEKRALYLKMASVWHLTAQRWEKKG
Ga0208604_102939023300027090Forest SoilPPTLFREFAAECMELAQTIPSHEKRALYLKMASVWHQMAQRWEKKS
Ga0170834_10120992913300031057Forest SoilPPTLFREFAAECMELAQTNPSHEKRALYLKMASVWHHMAQRWEKK
Ga0318542_1042519223300031668SoilCMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318574_1055488523300031680SoilYKDREPSTLFREFAAECMELAQTTPTPEKRSLYMKMASLWHRMAQRWEKKG
Ga0318572_1090438323300031681SoilTLFREFAAECMELAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP
Ga0318501_1036682713300031736SoilILFREFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Ga0306918_1088183823300031744SoilDVNPPTLFRDFAADCMELEQSTPLPEKRRLYVKMASVWHQMALRWEKKD
Ga0318502_1068384313300031747SoilTLFREFAAECMELAQTTPTPEKRTLYMKMASVWHQMALRWEKKG
Ga0318502_1095344913300031747SoilFAAECAELAQDTPSSEKRTLYLKMASVWHHMALRRERKG
Ga0307477_1014604243300031753Hardwood Forest SoilMLFREFAAECMELAQTVSSPEKRALYMKMASVWFQM
Ga0307475_1085650613300031754Hardwood Forest SoilLFREFAAECIGLARTASSPEKHTLYLKMASVWHRMAQRWEKKS
Ga0318509_1022441533300031768SoilEPSTLFREFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318509_1036702313300031768SoilREFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318543_1024318513300031777SoilMLFREFAAECAELAQGTSSPEKRTLYLKMASVWHQMALRWEKKG
Ga0318547_1004744313300031781SoilTLFREFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318557_1022910433300031795SoilAAECMELAQTAPSPEKHALYMKMASAWFQMARRWEKKN
Ga0318512_1021500413300031846SoilMLFREFAAECMELAQTTSSPEKHALYVKMACVWFQMAQRWEKKS
Ga0306919_1027686423300031879SoilASECVELAQSAPLPEKRSLYMKMASVWHQMAVRWEKKG
Ga0318551_1080062523300031896SoilCMELAQTTPTPEKRSLYMKMASLWHRMAQRWEKKG
Ga0306923_1027053633300031910SoilEFAAECTQLAQTAPTYEKRTLYMRMASVWHQMALRWEKKG
Ga0306923_1049672613300031910SoilWRATKSSPEKRALYLKMASVWHQMAQRWEKKSQPSP
Ga0310912_1138099623300031941SoilEDRDPPTLFREFAAECMELAQTTPTPKKRTLYMKMASVWHKIAQRWEKK
Ga0310916_1065531633300031942SoilVDASTLFRQFACECVELAQSTPLPEKRTLYMKMASVWHQMALRWEKKG
Ga0310916_1173736913300031942SoilREFGAECIELAQTASSPEKHTLYLKMASVWHQMAQRWEERS
Ga0310913_1093695033300031945SoilLAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP
Ga0310910_1030132613300031946SoilMSAFGTPTLFREFAAECMELVQTTSLPEKRALYLKMASMWFQMAQRWERG
Ga0306926_1060919733300031954SoilTLFREFAAECIELARTASSPEKHALYMKMASVWHQIAQRWEEKS
Ga0318530_1035112713300031959SoilTLFRDFAAECMDLAQTAPTPKKRTLYMRMASVWHQMALRWEKKG
Ga0306922_1019882513300032001SoilPALFREFAAECMDLAQTAPTPKKRTLYMKMASVWHQMALRWEKKS
Ga0306922_1033544813300032001SoilDPSTLFREFAAECAELARDTPSSEKRTLYLKMASVWHHMALRRERKG
Ga0310911_1014532713300032035SoilFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318556_1050869513300032043SoilFREFAAECMELAQTASSPEKHALYVKMASVWFQMAQRWEKKS
Ga0318532_1000538173300032051SoilCEPSTLFREFAAECMELAQTTSTPEKRTLYMKMASVWHQMALRWEKKG
Ga0318575_1068399923300032055SoilAAECAELAQGTSSPEKRTLYLKMASVWHQMALRWEKKG
Ga0318533_1059154013300032059SoilELAQTAPTPKKRTLYMKMASVWHQTALRWEKKNGGWFY
Ga0318533_1107550813300032059SoilEFAAECMELAQTAPTPEKRTLYLKMASVWHQMAQRWEKKASPSVAP
Ga0306924_1019966533300032076SoilEPSTLFREFAAECAQLAQTAPTYEKRTLYMRMASVWHQMALRWEKKG
Ga0306924_1197868523300032076SoilEDCRPSTLFREFAAECIDLARTASSPEKHALYMKMASVWHQIAQRWEEKS
Ga0306924_1199024213300032076SoilVNPPTLFRDFAAECMELAQSTPLPEKRRLYVKMASVWHQMALRWEKKD
Ga0306920_10027849753300032261SoilDPSTLFREFAAECAELARDTPSSEKRTLYLKMACVWHQMALRWERKG
Ga0306920_10030750043300032261SoilECMELAQTTPTPKKRTLYMKMASVWHKIAQRWEKK
Ga0306920_10040834443300032261SoilREFAAECIELAQTASSPEKHALYMKMASVWHQIAQRWEKKS
Ga0306920_10292131523300032261SoilSMLFREFAAECMELAQTTSSPEKHALYLKMASVWFQMAQRWEKKS
Ga0310914_1088652213300033289SoilLFRQFASECVELAQSTPLPEKRSLYMKMASVWHQMAVRWEKKG
Ga0310914_1130517013300033289SoilEPSTLFREFAAECTQLAKTAPTPDKRALYLRMASVWHQMAVRWEMKREADEWR
Ga0310914_1143838113300033289SoilFASECVELAHSTPLPEKRTLYMKMASVWHQMALRWEKKG
Ga0310914_1181347113300033289SoilECIELAQTASSPEKRALYLKMASVWHQMAQRWEKKG
Ga0318519_1049462813300033290SoilYEGREPSTLFRDFAAECMDLAQTAATPKKRTLYMRMASVWHKIALRWEKKG


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