Metagenome / Metatranscriptome Family F075469

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075469
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	76 residues
Representative Sequence	MNRTRLLAALAVMLAAPALGAQQQYGRDSDTWRWDGRVDAGHWMNVFNMNGTVDFAPSPDNMVHLVAEKRSNG
Number of Associated Samples	106
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.96 %
% of genes near scaffold ends (potentially truncated)	97.48 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.210 % of family members)
Environment Ontology (ENVO)	Unclassified (30.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.78% β-sheet: 18.81% Coil/Unstructured: 59.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13349	DUF4097	47.90
PF13345	Obsolete Pfam Family	18.49
PF13490	zf-HC2	4.20
PF08281	Sigma70_r4_2	3.36
PF02222	ATP-grasp	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	86.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	86.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	26.05 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	7.56 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.05 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	7.56 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.05 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	7.56 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.05 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	6.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.05 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6.72 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000880\|AL20A1W_1060308	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300001305\|C688J14111_10062290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1130	Open in IMG/M
3300001333\|A21PFW6_1070145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	648	Open in IMG/M
3300001333\|A21PFW6_1188367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1077	Open in IMG/M
3300001334\|A2165W6_1100745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300001361\|A30PFW6_1082219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1406	Open in IMG/M
3300001535\|A3PFW1_10125022	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300001538\|A10PFW1_10561790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	550	Open in IMG/M
3300001661\|JGI12053J15887_10519507	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	568	Open in IMG/M
3300001686\|C688J18823_10156736	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300001686\|C688J18823_10965673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	540	Open in IMG/M
3300002907\|JGI25613J43889_10027896	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300003324\|soilH2_10003118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4856	Open in IMG/M
3300004479\|Ga0062595_100465970	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300004799\|Ga0058863_10627668	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	698	Open in IMG/M
3300004800\|Ga0058861_11410697	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300004803\|Ga0058862_12524569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	622	Open in IMG/M
3300005093\|Ga0062594_100725430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	902	Open in IMG/M
3300005175\|Ga0066673_10083541	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1684	Open in IMG/M
3300005178\|Ga0066688_11024441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	502	Open in IMG/M
3300005330\|Ga0070690_100542172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	876	Open in IMG/M
3300005337\|Ga0070682_100460839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	976	Open in IMG/M
3300005366\|Ga0070659_100095976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2382	Open in IMG/M
3300005440\|Ga0070705_101490045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	566	Open in IMG/M
3300005445\|Ga0070708_101059590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	760	Open in IMG/M
3300005446\|Ga0066686_10028186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3243	Open in IMG/M
3300005447\|Ga0066689_10300164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	996	Open in IMG/M
3300005468\|Ga0070707_100584185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1079	Open in IMG/M
3300005530\|Ga0070679_100300838	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1555	Open in IMG/M
3300005555\|Ga0066692_10730050	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	612	Open in IMG/M
3300005615\|Ga0070702_101117452	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	631	Open in IMG/M
3300005718\|Ga0068866_10819258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	648	Open in IMG/M
3300006237\|Ga0097621_102027470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	550	Open in IMG/M
3300006755\|Ga0079222_10469652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	908	Open in IMG/M
3300006864\|Ga0066797_1203784	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300007265\|Ga0099794_10524008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	625	Open in IMG/M
3300007822\|Ga0104325_101024	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1015	Open in IMG/M
3300009029\|Ga0066793_10068725	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300009093\|Ga0105240_12598593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300009098\|Ga0105245_11918016	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	646	Open in IMG/M
3300010325\|Ga0134064_10374285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	562	Open in IMG/M
3300010336\|Ga0134071_10585028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300010373\|Ga0134128_12340526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	588	Open in IMG/M
3300011992\|Ga0120146_1021983	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1185	Open in IMG/M
3300012199\|Ga0137383_10121141	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300012202\|Ga0137363_10263982	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300012206\|Ga0137380_10074626	All Organisms → cellular organisms → Bacteria	3102	Open in IMG/M
3300012206\|Ga0137380_11630830	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	529	Open in IMG/M
3300012208\|Ga0137376_10415354	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1168	Open in IMG/M
3300012211\|Ga0137377_11567590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300012212\|Ga0150985_111286936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	662	Open in IMG/M
3300012469\|Ga0150984_100033150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300012582\|Ga0137358_10185972	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300012906\|Ga0157295_10392780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	515	Open in IMG/M
3300012944\|Ga0137410_10482618	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1011	Open in IMG/M
3300012944\|Ga0137410_11167499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	662	Open in IMG/M
3300012958\|Ga0164299_10672686	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	719	Open in IMG/M
3300012960\|Ga0164301_11040163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	647	Open in IMG/M
3300012961\|Ga0164302_11574739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300012961\|Ga0164302_11832927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300013307\|Ga0157372_12409289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	604	Open in IMG/M
3300013765\|Ga0120172_1155285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300013766\|Ga0120181_1139483	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	528	Open in IMG/M
3300014056\|Ga0120125_1091302	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	704	Open in IMG/M
3300014829\|Ga0120104_1055073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300015164\|Ga0167652_1061532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	679	Open in IMG/M
3300015200\|Ga0173480_10688537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	639	Open in IMG/M
3300015245\|Ga0137409_10111568	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300018027\|Ga0184605_10544187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	501	Open in IMG/M
3300018054\|Ga0184621_10063763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1256	Open in IMG/M
3300018061\|Ga0184619_10036036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2107	Open in IMG/M
3300019877\|Ga0193722_1019961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1730	Open in IMG/M
3300019879\|Ga0193723_1082144	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	923	Open in IMG/M
3300019881\|Ga0193707_1201612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300019890\|Ga0193728_1340582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300019997\|Ga0193711_1046047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300020062\|Ga0193724_1005368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2761	Open in IMG/M
3300021339\|Ga0193706_1112597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300021363\|Ga0193699_10053870	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1561	Open in IMG/M
3300021363\|Ga0193699_10294776	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	676	Open in IMG/M
3300021418\|Ga0193695_1101720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	614	Open in IMG/M
3300021510\|Ga0222621_1042684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	945	Open in IMG/M
3300021968\|Ga0193698_1048873	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300022694\|Ga0222623_10027185	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300023058\|Ga0193714_1020852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	970	Open in IMG/M
3300024283\|Ga0247670_1003341	All Organisms → cellular organisms → Bacteria	3172	Open in IMG/M
3300025917\|Ga0207660_10023897	All Organisms → cellular organisms → Bacteria	4132	Open in IMG/M
3300025921\|Ga0207652_11068897	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	707	Open in IMG/M
3300025921\|Ga0207652_11221119	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	654	Open in IMG/M
3300025921\|Ga0207652_11728921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300025922\|Ga0207646_10033927	All Organisms → cellular organisms → Bacteria	4612	Open in IMG/M
3300025922\|Ga0207646_10310340	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300025923\|Ga0207681_11280354	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	616	Open in IMG/M
3300025927\|Ga0207687_10027020	All Organisms → cellular organisms → Bacteria	3847	Open in IMG/M
3300025927\|Ga0207687_11702376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	540	Open in IMG/M
3300025927\|Ga0207687_11837470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	518	Open in IMG/M
3300025928\|Ga0207700_11423562	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	616	Open in IMG/M
3300025949\|Ga0207667_11146921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	759	Open in IMG/M
3300026025\|Ga0208778_1014679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	750	Open in IMG/M
3300026223\|Ga0209840_1081608	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	705	Open in IMG/M
3300026542\|Ga0209805_1384104	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	538	Open in IMG/M
3300026548\|Ga0209161_10113465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1616	Open in IMG/M
3300027395\|Ga0209996_1032169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M
3300027765\|Ga0209073_10031724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1641	Open in IMG/M
3300028381\|Ga0268264_11864226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	611	Open in IMG/M
3300028716\|Ga0307311_10266661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300028717\|Ga0307298_10205985	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	580	Open in IMG/M
3300028768\|Ga0307280_10193177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	717	Open in IMG/M
3300028791\|Ga0307290_10211073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	711	Open in IMG/M
3300028799\|Ga0307284_10428555	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300028824\|Ga0307310_10148486	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1080	Open in IMG/M
3300028828\|Ga0307312_10091976	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300028828\|Ga0307312_10335079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	988	Open in IMG/M
3300028878\|Ga0307278_10254159	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	780	Open in IMG/M
3300028885\|Ga0307304_10113358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1097	Open in IMG/M
3300031421\|Ga0308194_10137187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	742	Open in IMG/M
3300031740\|Ga0307468_101819715	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	577	Open in IMG/M
3300034268\|Ga0372943_0059840	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2150	Open in IMG/M
3300034268\|Ga0372943_0139488	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1465	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.87%
Host-Associated	Host-Associated	15.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.67%
Plants	Host-Associated → Plants	12.61%
Aquatic	Environmental → Aquatic	4.20%
Human	Host-Associated → Human	2.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.56%
Sediment	Environmental → Aquatic → Sediment	4.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.20%
Digestive System	Host-Associated → Human → Digestive System	2.52%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.34%
Loam	Environmental → Terrestrial → Soil → Loam	15.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.36%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.52%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.21%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	10.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.04%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.04%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.52%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.84%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.84%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007822	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-8-2 Soapdenovo	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL20A1W_10603081	3300000880	Permafrost	MNRTRLFAALAVLLAAPALGAQQQYGRDSDTWKWDGRVDAGHWMNVFNINGSVDFAPSPDNMVHLVAVKRSNGREMDDIHYEVVQAGGNVTICAIWNN
C688J14111_100622901	3300001305	Soil	MNKTTIGAIALIMAAPVLGAQQQYGREGDTWRWDGKVDAGHWMSVFNVNGSVDF
A21PFW6_10701451	3300001333	Permafrost	MNRTRLFAALAVLLAAPALGAQQQYGRDSDTWKWDGRVDAGHWMNVFNINGSVDFAPSPDNMVHLVAVKRSNGREMDDIHYEVVQAGGNVTIC
A21PFW6_11883671	3300001333	Permafrost	MNRTRFFAALAVFLAAPALMAQQQYGRDSDIWRWDGRVDASRWMNVFNVNGSVDFAPSEDNMVHLVAEKRSNGRDMDDIHYEVVQAGGNVTIC
A2165W6_11007451	3300001334	Permafrost	MNRTRFFAALAVFLAAPALMAQQQYGRDSDIWRWDGRVDAGRWMNVFNVNGSVDFAPSEDNMVHLVAEKRSNGRDMDDIHYEVVQAGGNVTIC
A30PFW6_10822191	3300001361	Permafrost	MNRTRLFAALAVLLAAPALGAQQQYGRDSDTWKWDGRVDAGHWMNVFNINGSVDFAPSPDNMVHLVAVKRSNGREMDDIHYEVVQAGGNVTICAIW
A3PFW1_101250222	3300001535	Permafrost	MNRTRLFAALAVLLAAPALGAQQQYGRDSDTWKWDGRVDAGHWMNVFNINGSVDFAPSPDNMVHLVAVKRSNGREMDDIHYEVVQAGGNVTILSLIHI*
A10PFW1_105617902	3300001538	Permafrost	MNKTRLIAGLAVVLAAPALGAQQQYGRDSDVWRWDGRVDAGHWMNVFNINGIVDFVPSPDNMVHLLAEKRSNGRXXXXXXXXL*
JGI12053J15887_105195072	3300001661	Forest Soil	MNRMRLVAALAVLLTASALGAQQSYGRNSDVWRWDGRVDAGRWMNVFNVNGTVDFAPSPDNMVHLLAEKRSNGRDMDDIHYE
C688J18823_101567363	3300001686	Soil	MNKSTMAAIALVIAAPLLGAQQQYGREGDVWRWDGKVDAGHWMSVFNINGSVDFLPSTDNMVHL
C688J18823_109656731	3300001686	Soil	MKGTRLSAVLALLLAAPAIGAQQQYGRDSNTWRWDGRVEAGRWMHVFNVNGSVDFMPSDDGQVHLVAEKR
JGI25613J43889_100278963	3300002907	Grasslands Soil	MNKTRLFAAFAVLLAAPVLGAQQQYGRDSDTWKWDGRVDAGHWMNVFNVNGTVDFXPSPDNXVH
soilH2_100031187	3300003324	Sugarcane Root And Bulk Soil	MNRKRLWAVVAFLAAAPVLGAQQQYGRDTDTWRWDGRVEAGRWMHVFNVNGSVDFLPSPDGSVHLVAEKRTRDGREPDDIHFEVVQTGGNVTIC
Ga0062595_1004659701	3300004479	Soil	MNKTTIFAGLAFAVAAPLLGAQQQFGRDGDVWRWDGRVDGGRWMNVFNVNGSVDFAPSADNMVHLLAEKRSNGREPDNIHYEVVQA
Ga0058863_106276681	3300004799	Host-Associated	MNSTKILGALALLLAAPALGAQQQFGRDTDTWRWDGRVDAGRWMHVVNVNGSVDFSPSSDNMVHVVAEKRSNGRDMDDI
Ga0058861_114106971	3300004800	Host-Associated	MNRTRLLAALAVMLAAPAIGAQQQYGRDSDTWRWDGRVDAGHWMNVFNMNGTVDFAPSPDNMVHLVAEKRSNGREMDDIHYEVVQVG
Ga0058862_125245691	3300004803	Host-Associated	MNSTKILGALALLLAAPALGAQQQFGRDTDTWRWDGRVDAGRWMHVVNVNGSVDFSPSSDNMVHV
Ga0062594_1007254301	3300005093	Soil	MNKTTIFAGLAFAVAAPLLGAQQQFGRDGDVWRWDGRVDGGRWMNVFNVNGSVDFAPSADNMVHLLAEKRSNGREPDNIHYEVVQAGGNVTI
Ga0066673_100835411	3300005175	Soil	MNKTTLGAAIALMFAAPLVGAQQQYGRDADVWRWDGRVEAGRWMNVFNINGSVDFLPSNDNMVHLVAEKRTQNGR
Ga0066688_110244411	3300005178	Soil	MNRTKLLAIFAVLFAAPAIGAQQQFGRDSDVWRWDGRVDSGRWMHVFNMNGTVEFTPSSDNMVHLV
Ga0070690_1005421722	3300005330	Switchgrass Rhizosphere	MNRTTFGAAIALLLAAPALGAQQQYGRDGDVWRWDGRVEPGRWMSVFNVNGSVEFAPSNDNMVHLVAEKR
Ga0070682_1004608392	3300005337	Corn Rhizosphere	MNKTTFGAALALILVAPVLGAQQQFGRDSDVWRWDGRVDAGRWMHVFNLNGSVDFLPSNDNMVHLVAEKRTN
Ga0070659_1000959764	3300005366	Corn Rhizosphere	MNSTKILGALALLLAVPTLGAQQQLGRDTDTWRWDGRVDAGRWMHVVNINGSVDFSPSSDNMVHVLAEKRSNGRDMDDIHFE
Ga0070705_1014900452	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNKTILGAAVALLIAAPVLGAQQQFGRDSDVWRWDGRVDSGKWMHVFNVNGTVDFMPSSDNMVHLVAEKRTNRGEV
Ga0070708_1010595901	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNKTTIGAAIALMLVAPVLGAQQQYGRDSDVWRWDGRVDGGRWMNVFNVNGSVDFLPSNDNMVHLVAEKRTQNGREPDDIHYEVVQAGGNVTICAIWNNNSRC
Ga0066686_100281861	3300005446	Soil	MNRTKLLAILAFLFAAPVIGGAQQQYGRDSDVWRWDGRVESGRWMHVFNLNGTVEFTPSPDNMVHLVAEKRSNGREMDDIHYEVVPAGGNVTIC
Ga0066689_103001641	3300005447	Soil	MNRTTLGAVIALAIAAPVLGAQQQYGRDSDVWRWDGRVDGGRWMNVFNVNGSVDFLPSNDNMVH
Ga0070707_1005841851	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNKAKLFAALAVLLAAPVLGAQQQYGRDTDTWKWDGRVDAGHWMNVFNVNGTVDFAPSPDNMV
Ga0070679_1003008381	3300005530	Corn Rhizosphere	MTKRTIGAIALFLAAPVLGAQQQFGRDTDTWRWDGRVDAGKWMSVFNVNGSVDFLPSNDNMVHLVAEKRTSRGEP
Ga0066692_107300502	3300005555	Soil	MNRTTLGAVIALAIAAPVLGAQQQYGRDSDVWRWDGRVDGGRWMNVFNVNGSVDFLPSNDNMVHLVAEKRTQNGREPDDIHYEVVQAGGNVTICAIWNNNSRC
Ga0070702_1011174522	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNKRTIGAIALFLAAPVLGAQQQFGRDTDTWRWDGRVDAGKWMSVFNVNGSVDFLPSNDNMVHLVAE
Ga0068866_108192582	3300005718	Miscanthus Rhizosphere	MNRTTFGAAIALLLAAPALGAQQQYGRDGDVWRWDGRVEPGRWMSVFNVNGSVEFMPSNDNMVHLVAEKRTNRGEPDDIHYEVV
Ga0097621_1020274702	3300006237	Miscanthus Rhizosphere	MNKRTIGAIALFLAAPVLGAQQQFGRDTDTWRWDGRVDAGKWMSVFNINGSVDFLPSNDNMVHLVAEKRTSRG
Ga0079222_104696522	3300006755	Agricultural Soil	MKGMKLSAVLALLLAAPAIGAQQEYGRDSNTWRWDGRVDAGKWMHVFNVNGSVDFMPS
Ga0066797_12037841	3300006864	Soil	MNRMRFFAALAVLLAAPALGAQQQYGRDSDAWRWDGRVNAGHWMNVFNINGSVDFTPSPDNMVHLVAEKRSNGREMDDIHYE
Ga0099794_105240082	3300007265	Vadose Zone Soil	MMNKTRLFAALAVLLAAPVLGAQQQYGRDSDAWKWDGRVDAGHWMNVFNVNGTVDFAPSPDNMVHLVAEKRSNGREMDDIHFEVVQADGNV
Ga0104325_1010242	3300007822	Soil	MNRTRLVAALAVLLAAPALGAQQQYGRDSDTWRWDGRVDAGHWMNVFNVNGSVEFAPSPDNMV
Ga0066793_100687251	3300009029	Prmafrost Soil	MNRTRLFAALAVLLAAPALGAQQQYGRDSDTWKWDGRVDAGHWMNVFNINGSVDFAPSPDNM
Ga0105240_125985932	3300009093	Corn Rhizosphere	MLAAPAIGAQQQYGRDSDTWRWDGRVDAGHWMNVFNMNGTVDFAPSPDNMVHLVAEKRSNGREMDDI
Ga0105245_119180162	3300009098	Miscanthus Rhizosphere	MLAAPVLGAQQQYGRDSDTWRWDGRVEAGKWMNIFNVNGSVDFMPSEDNSVHVLAEKRTREGRETDDIHYEVVQAGG
Ga0134064_103742851	3300010325	Grasslands Soil	MNKTTLGAAIALMFAAPLVGAQQQYGRDADVWRWDGRVEAGRWMNVFNINGSVDFLPSNDNMVHLVAEKRTQNGREPDDIHYEVVQSGGNVTICAIWNNNARCE
Ga0134071_105850282	3300010336	Grasslands Soil	MNRTKLLAILAFLFAAPVIGGAQQQYGRDSDVWRWDGRVESGRWMHVFNLNGTVEFTPSPDNMVHLVAEKRSNGREMDDIHYEVVQAGGNVTICAIWN
Ga0134128_123405262	3300010373	Terrestrial Soil	MLAAPVLGAQQQYGRDSDTWRWDGRVEAGKWMNIFNVNGSVDFMPSEDNSVHVLAEKRTREGRETD
Ga0120146_10219832	3300011992	Permafrost	MRIIAGLALALIAPVLAAQQQFGRDSDVWRWDGRVDGGRWMNVFNMNGSVDFAPSSDNMVHL
Ga0137383_101211413	3300012199	Vadose Zone Soil	MNKAKLFAALAVLLAAPIVGAQQQYGRDTDTWKWDGRVDAGHWMNVFNVNGTVDFAPSPD
Ga0137363_102639823	3300012202	Vadose Zone Soil	MNKTRLFAAFAVLLAAPLLGAQQQYGRDSDTWKWDGRVDAGHWMNVFNVNGTVDFAPSPDNTVHLVAEKRS
Ga0137380_100746265	3300012206	Vadose Zone Soil	MNRTKPLAILAFLFAAPVIGAQQQYGRDSDIWRWDGRVDSGRWMHVFNLNGTVEFTPSSDNMV
Ga0137380_116308301	3300012206	Vadose Zone Soil	MNRTKLLAILAFLFAAPVIGGAQQQYGRDADIWRWDGRVDSGRWMHVFNLNGTVEFTPSSDNMVHLVA
Ga0137376_104153541	3300012208	Vadose Zone Soil	MNKSIFGAAIALAIAAPALTAQQQYGRDSDVWRWDGRVDAGKWMSVFNVNGSVEFTPSSDNMVHLVAEKRTRDGRDPDDIHYEVVQNG
Ga0137377_115675902	3300012211	Vadose Zone Soil	MFAAPILGAQQQYGRDSDVWRWDGRVDAGKWMNVFNVNGSVEFMPSSDNMVHLVAEKRTREGR
Ga0150985_1112869362	3300012212	Avena Fatua Rhizosphere	MNSTKFLGAVALLLAAPVLGAQQQQGRDSDTWRWDGRVDSGHWMHVFNVNGSVDFAPSSDNMVHVTAEKRSNGREMDDIHFEVVQ
Ga0150984_1000331502	3300012469	Avena Fatua Rhizosphere	MKRTRLAILALMVAAPVLGAQQEYGRDSNVWRWDGRIDAGRWMHVFNVNGSVDFLP
Ga0137358_101859721	3300012582	Vadose Zone Soil	MMNKTRLFAALAVLLVAPILGAQQQYGRDSDTWKWDGRVDAGHWMNVFNVNGTVDFAPSPDNMVHLVAEKRSNGRE
Ga0157295_103927801	3300012906	Soil	MNRTTFGAAIALLLAAPALGAQQQYGREGDVWRWDGRVEPGRWMSVLNVNGSVDFAPSNDNMVHVVAEKRTNRGEPDDIHYEVVQEGGN
Ga0137410_104826182	3300012944	Vadose Zone Soil	MNKKKLFAALAVLLAAPLLGAQQQYGRDTDTWKWDGRVDAGHWMNVFNVNGTVDFAPSPDNMVHLVA
Ga0137410_111674991	3300012944	Vadose Zone Soil	MMNKTRLFAAFALLLAAPVLGAQQQYGRDSDTWKWDGRVDAGHWMNVFNVNGTVDFAPSPDNTVHLVAEKRSNGREMDDIH
Ga0164299_106726862	3300012958	Soil	MKGMRVGAVIALLVAAPAIGAQQQYGRDSNTWRWDGRVEAGRWMHVFNVNGSVDFMPSDDGQVHLVAEKRTRDGRDQ
Ga0164301_110401631	3300012960	Soil	MKAMRLSAVLALLLAAPALGAQQQYGRESNTWRWDGRVDAGRWMHVFNVNGSVDFLPS
Ga0164302_115747391	3300012961	Soil	MNRTKLWAAIALMLVAPALGAQQQYGRDSDIWRWDGQVGAGRWMNVFNVNGSVDFLPSE
Ga0164302_118329272	3300012961	Soil	MNSTKLLGAIALLLVAPALGAQQQYGRDSDTWRWDGRVDAGHWMHVFNINGSVDFVPSSDNMVHVTAEKRSNGREM
Ga0157372_124092892	3300013307	Corn Rhizosphere	LAFAVAAPLLGAQQQFGRDGDVWRWDGRVDGGRWMNVFNVNGSVDFAPSADNMVHLLAEKRSNGREPDNIHYEVVQAGGNVTNCAIWNDNSRCEDGGM*
Ga0120172_11552852	3300013765	Permafrost	MNKTRLIAGLAVVLAAPVLSAQQQYGRNSDVWRWDGRVDAGRWMNVFNVNGSVDFAPSPDNLVHLVAEKRSNGGELDDIH
Ga0120181_11394832	3300013766	Permafrost	MNKTRLFAALAVLLTAPALGAQQQYGRDSDTWRWDGRVDAGRWMNVFNVNGSVDFAPSPD
Ga0120125_10913022	3300014056	Permafrost	MMNKTRLFAALAVLLAAPVLGAQQQYGRDSDTWKWDGRVDAGHWMNVFNVNGTVDFALSPDNMV
Ga0120104_10550732	3300014829	Permafrost	MLLAAPILGAQQQYGRDSDTWRWDGRVDTAHWMNVFNVNGSVEFTPSPDNMVHLVAQKRSNGRGTDDIHYEVVQVGGNVTICAIWLPGHG*
Ga0167652_10615322	3300015164	Glacier Forefield Soil	MNRTRIFAALAVSLAAPALGAQQQYGRDSDTWRWDGRVDAGRWMSVFNVNGSVDFAPSPDNMVHLIAEKRSNGHEMD
Ga0173480_106885371	3300015200	Soil	MNRTTFGAAIALLLAAPALGAQQQYGRDGDVWRWDGRVEPGRWMSVFNVNGSVDFAPSNDNMVHVVAEKRTNRGEPDDIHYEVVQE
Ga0137409_101115681	3300015245	Vadose Zone Soil	MLAAPALGAQQQYGRDSDTWKWDGRVDAGKWMSVFNVNGSVEFMPSTDNMVHLVAEKRTRDGG
Ga0184605_105441871	3300018027	Groundwater Sediment	MNRTRILAALALMVAAPVLGAQQQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFAPSPDNMVHLIAEK
Ga0184621_100637631	3300018054	Groundwater Sediment	MNRTRILAALALMVAAPALGAHQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFAPSPDNMVHLIAEKRSTGRGDQDDIHFEVVQTGGNVTVCAIWNDS
Ga0184619_100360361	3300018061	Groundwater Sediment	MNRTRFFAALAVLLAAPALGAQQQYGRDSDTWRWDGRVDAGRWMNVFNVNGTVDFAPSTDNMVHLVAEKRSNGREMDDIHYEVVQSGGN
Ga0193722_10199611	3300019877	Soil	MNRTRLLAALAVMLAAPALGAQQQYGRDSDTWRWDGRVDAGHWMNVFNMNGTVDFAPSPDNMVHLVAEKRSNG
Ga0193723_10821441	3300019879	Soil	MNRTRLLAALAVMLAAPAIGAQQAYGRDSDTWRWDGRVDAGHWMNVFNMNGTVEFAPSPDNM
Ga0193707_12016122	3300019881	Soil	MNRTRILAALALMVAAPALGAQQQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFAPSPDNMVHLLAEKRSTGRGDQDDIHFEVVQSGGN
Ga0193728_13405822	3300019890	Soil	MNKTRLFAALAVLLAAPVLGAQQQYGRDSDTWKWDGRVDAGHWMNVFNVNGTVDFAPSPDNMVHLVAEKRSNGREMDDIHFEVVQAGGNVTICAIWNNSG
Ga0193711_10460471	3300019997	Soil	MNRTKIVAALAFVLAAPALGAQQEFGRDSDTWRWDGRVDSGRWMHVFNVNGSVDFGVSPDNQVHLVAEKRSNGREMDDIHFEVVQVGGNVTIC
Ga0193724_10053681	3300020062	Soil	MNRTRLLAALAVMLAAPAIGAQQAYGRDSDTWRWDGRVDAGHWMNVFNINGTVEFAPSPDNMVHLVA
Ga0193706_11125972	3300021339	Soil	MNRTTIFAGLAFAVAAPLLGAQQQFGRDSDVWRWDGRVDGGRWMSVFNINGSVDFAPSADNMVHLVAEKRSNGRELDDIHYEV
Ga0193699_100538701	3300021363	Soil	MNRTRLFAALALLAAPALGAQQQFGRDSDTWRWDGRVDAGRWMHVFNVNGSVDFAPSPDNMV
Ga0193699_102947762	3300021363	Soil	MNKTRLFAALAVLLAAPALGAQQQFGRDTDTWKWDGRVDAGKWMHVFNVNGSVEFAPSPDNMVHVLAEKRSNGREMDDI
Ga0193695_11017201	3300021418	Soil	MNRTRIVAALAFMLAAPVLGAQQEYGRNSDTWRWDGRVDAGRWMNVFNVNGTVDFTP
Ga0222621_10426842	3300021510	Groundwater Sediment	MNRTRILAALALMVAAPALGAQQQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFGPSPDNMVH
Ga0193698_10488732	3300021968	Soil	MNRTRLLAAVAVMLAAPALGAQQQYGRDSDTWRWDGRVDAGHWMNVFNMNGTVEFA
Ga0222623_100271851	3300022694	Groundwater Sediment	MNRTRILAALALMVAAPALAAQQQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFAPSPDNMVHLIAEKRSTGRGDRDDIHFEVVQSGGNVTICVIWNDS
Ga0193714_10208521	3300023058	Soil	MNRTKTLAALAVMLAAPALGAQQQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFAPSPDNMVHLIAEKRST
Ga0247670_10033411	3300024283	Soil	MNRTRLLAALAVMLAAPAIGAQQQYGRDSDTWRWDGRVDAGHWMNVFNMNGTVDFAPSPDNMVHLVAEKRSNGREMDDIH
Ga0207660_100238971	3300025917	Corn Rhizosphere	MNSTKILGALALLLAVPTLGAQQQLGRDTDTWRWDGCVDAGRWMHVVNINGSVDFSPSS
Ga0207652_110688971	3300025921	Corn Rhizosphere	MNRTRLLAALAVMLAAPAIGAQQQYGRDSDTWRWDGRVDAGHWMNVFNMNGTVDFAPSPDNMVHLVAEKRSNGREMDDIHYEVVQVGGNVTICAIWNNSSRCEDG
Ga0207652_112211192	3300025921	Corn Rhizosphere	MNKTTFGAALALILVAPVLGAQQQFGRDSDVWRWDGRVDAGRWMHVFNLNGSVDFLPSNDNMVHLVAEKR
Ga0207652_117289211	3300025921	Corn Rhizosphere	MTKRTIGAIALFLAAPVLGAQQQFGRDTDTWRWDGRVDAGKWMSVFNVNGSVDFLPSNDNMVHLVAEKRTSRGEPDDIHFEVVQQ
Ga0207646_100339277	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNRTRLFAAIAVLITAPVLGAQQQYGRDTDTWKWDGRVDAGHWMNVFNVNGTVDFAPSP
Ga0207646_103103403	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNKAKLFAALAVLLAAPVLGAQQQYGRDTDTWKWDGRVDAGHWMNVFNVNGTVDFAPSPDNMVHLVAE
Ga0207681_112803542	3300025923	Switchgrass Rhizosphere	MNRTTFGAAIALLLAAPALGAQQQYGRDGDVWRWDGRVEPGRWMSVFNVNGSVEFAPSN
Ga0207687_100270201	3300025927	Miscanthus Rhizosphere	MNRTTFGAAIALLLAAPALGAQQQYGRDGDVWRWDGRVEPGRWMSVFNVNGSVEFAPSNDNMVHLVAEKRTNRGE
Ga0207687_117023761	3300025927	Miscanthus Rhizosphere	MNKRTIGAIALFLAAPVLGAQQQFGRDTDTWRWDGRVDAGKWMSVFNINGSVDFLPSNDNMVHLVAEKRTSRGEPDDIHF
Ga0207687_118374701	3300025927	Miscanthus Rhizosphere	MTKTRLAAALALMLAAPVLGAQQQYGRDSDTWRWDGRVEAGKWMNIFNVNGSVDFMPSEDNSVHVLAEKRTREGRETDDIHYEVVQAG
Ga0207700_114235622	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNRTRLLAALAVMLAAPAIGAQQQYGRGSDTWRWDGRVDAGHWMNVFNVNGTVDFAPSPDNMVHLVAEKRSNGREMDDIHFE
Ga0207667_111469211	3300025949	Corn Rhizosphere	MNSTKILGALALLLAAPALGAQQQFGRDTDTWRWDGRVDAGRWMHVVNVNGSVDFS
Ga0208778_10146792	3300026025	Rice Paddy Soil	MNKTKLLGAVAFMLAAPVLGAQQRYGRDSDTWRWDGRVEAGRWMHIFNINGQVDFMPSNDNMVHVVAEKRSNGREMDDIHFEVVQAGGSVTIC
Ga0209840_10816082	3300026223	Soil	MNRTRLFAALAVLLAAPALGAQQQYGRDSDTWKWDGRVDAGHWMNVFNINGSVDFAPSPDNMVHLV
Ga0209805_13841041	3300026542	Soil	MNKTTFGAAIALILAAPVVGAQQQFGRDSDVWRWDGRVDAGRWMNVFNINGSVDFLQSNDNMVHLVAEKRTSNGRERED
Ga0209161_101134653	3300026548	Soil	MNRTTLGAVIALAIAAPVLGAQQQYGRDSDVWRWDGRVDGGRWMNVFNVNGSVDFLPSN
Ga0209996_10321692	3300027395	Arabidopsis Thaliana Rhizosphere	MNRMRIVAALAFMLAAPALGAQQEFGRDSDTWRWDGRVEAGRWMHVFNVNGSVDFAPSPDNQVHLVAEKRSNGREMDDIHFEVVQV
Ga0209073_100317241	3300027765	Agricultural Soil	MKGMRVGAVIALLLAAPAIGAQQQYGRDSNTWRWDGRVEAGRWMHVFNVNGSVDFMPS
Ga0268264_118642262	3300028381	Switchgrass Rhizosphere	MNRTTFGAAIALLLAAPALGAQQQYGRDGDVWRWDGRVEPGRWMSVFNVNGSVEFAPSNDNMVHLVAEKRTN
Ga0307311_102666612	3300028716	Soil	MSRTRILAALALMVAAPALGAQQQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFAPSPDNMVHLIAEKRSTGRG
Ga0307298_102059852	3300028717	Soil	MNKVRILAALALLCTTSQLGAQQQYGRDSDSWKWDGRVEAGRWMNIFNVNGSVDFLPSTDNMVHVMAEKRNNGRGNDDIHYEVVQAGGNVTICAIWNEN
Ga0307280_101931771	3300028768	Soil	MNRTRLLAALAVMLAAPALGAQQQYGRDSDTWRWDGRVDAGHWMNVFNMNGTVEFAPSP
Ga0307290_102110731	3300028791	Soil	MSRTRILAALALMVAAPALGAQQQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFAPSPDNMVHLIAEKRSTGRGDQDDIHFEVV
Ga0307284_104285551	3300028799	Soil	MNRTTIFAGLAFAVAAPLLGAQQQFGRDSNVWRWDGRVDGGRWMSVFNINGSVDFAPSADNMVHLVAEKRSNGRELDDILYEVVQAGGNVTICA
Ga0307310_101484861	3300028824	Soil	MNRIKLVAALAFVLAAPALGAQQEYGRNSDTWRWDGRVDAGRWMNVFNVNGTVDFAPSTDNMVHLVAEKRANGHPMDDIH
Ga0307312_100919763	3300028828	Soil	MNRTRLFGALAVLLAAPALGAQQQYGRDSDTWKWDGRVDAGHWMNVYNINGTVDFTPSTDNMVHLVAVKRSNGREMDDIHYEV
Ga0307312_103350791	3300028828	Soil	MNRTRFFAALAVLLAAPALGAQQQYGRDSDTWRWDGRVDAGRWMNVFNVNGTVDFAPSTDNMVHLVAEKRSNGREIDDIHY
Ga0307278_102541592	3300028878	Soil	MNRTKILAALALLLVAPALGAQQQYGRDSDTWRWDGRVEAGRWMSVFNVNGSVDFAISPDNMVHLVAEKRSNGREMDDIH
Ga0307304_101133581	3300028885	Soil	MNRTTTMAALALMLAAPALGAQQEYGRDSDAWRWDGRVESGRWMNVFNVNGSVDFAPSSDNMVHLIAE
Ga0308194_101371871	3300031421	Soil	MSRTRILAALALMVAAPALGAQQQYGRDTDTWKWDGRVDAGRWMQVFNVNGSVDFAPSTDNMVHLIAEKRSTGRGDQ
Ga0307468_1018197151	3300031740	Hardwood Forest Soil	MNKRTIGAIALFLAAPVLGAQQQFGRDTDTWRWNGRVDAGKWMSVFNVNGSVDFLPSND
Ga0372943_0059840_1_186	3300034268	Soil	MNSKRLLGAVALLLAAPVLGAQQQYGRDSDTWRWDGRVDAGRWMHVFNVNGSVDFAPSNDNM
Ga0372943_0139488_2_172	3300034268	Soil	MMKRTTFLAGLAIVLAAPLAGAQQQYGRDSNVWRWDGRVDAGRWMHIFNVNGQVDFV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075469

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences