Metagenome / Metatranscriptome Family F075460

Basic Information
Family ID	F075460
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	41 residues
Representative Sequence	VPVWGVVPERVGIAAGPEARLYREGLEEYDKVLRRALRGR
Number of Associated Samples	103
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.52 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (91.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (7.563 % of family members)
Environment Ontology (ENVO)	Unclassified (22.689 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.580 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.76% β-sheet: 0.00% Coil/Unstructured: 63.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF09996	DUF2237	9.24
PF04185	Phosphoesterase	3.36
PF00266	Aminotran_5	2.52
PF04545	Sigma70_r4	2.52
PF07883	Cupin_2	1.68
PF02774	Semialdhyde_dhC	1.68
PF02653	BPD_transp_2	1.68
PF08352	oligo_HPY	1.68
PF05988	DUF899	1.68
PF00005	ABC_tran	1.68
PF04087	DUF389	1.68
PF00557	Peptidase_M24	1.68
PF07978	NIPSNAP	1.68
PF01243	Putative_PNPOx	1.68
PF14542	Acetyltransf_CG	1.68
PF01551	Peptidase_M23	0.84
PF07837	FTCD_N	0.84
PF03631	Virul_fac_BrkB	0.84
PF12897	Asp_aminotransf	0.84
PF11336	DUF3138	0.84
PF09723	Zn-ribbon_8	0.84
PF09140	MipZ	0.84
PF13683	rve_3	0.84
PF03841	SelA	0.84
PF12697	Abhydrolase_6	0.84
PF05157	T2SSE_N	0.84
PF00216	Bac_DNA_binding	0.84
PF09948	DUF2182	0.84
PF01425	Amidase	0.84
PF12277	DUF3618	0.84
PF00587	tRNA-synt_2b	0.84
PF06262	Zincin_1	0.84
PF00903	Glyoxalase	0.84
PF13191	AAA_16	0.84
PF04984	Phage_sheath_1	0.84
PF13376	OmdA	0.84
PF13336	AcetylCoA_hyd_C	0.84
PF12680	SnoaL_2	0.84
PF02775	TPP_enzyme_C	0.84
PF01042	Ribonuc_L-PSP	0.84
PF00696	AA_kinase	0.84
PF13185	GAF_2	0.84
PF00174	Oxidored_molyb	0.84
PF02614	UxaC	0.84
PF07045	DUF1330	0.84
PF03640	Lipoprotein_15	0.84
PF00180	Iso_dh	0.84
PF00248	Aldo_ket_red	0.84
PF00313	CSD	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	3.36
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	1.68
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	1.68
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	1.68
COG1808	Uncharacterized membrane protein AF0785, contains DUF389 domain	Function unknown [S]	1.68
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.84
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.84
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.84
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG3643	Glutamate formiminotransferase	Amino acid transport and metabolism [E]	0.84
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.84
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.84
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.84
COG1904	Glucuronate isomerase	Carbohydrate transport and metabolism [G]	0.84
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.84
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	0.84
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.84
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.84
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.60 %
Unclassified	root	N/A	8.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.95 %
Unclassified	root	N/A	8.40 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	69.75 %
Unclassified	root	N/A	8.40 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.01 %
Unclassified	root	N/A	8.40 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	7.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.56 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	7.56 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.52 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.84 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.56 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples	7.56 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.68 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.84 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.84 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.84 %
Streptosporangiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	7.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.56 %
Mumia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Mumia	1.68 %
Allonocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis	0.84 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.84 %
Humibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus	0.84 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	7.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.56 %
Mumia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Mumia	1.68 %
unclassified Humibacillus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus	0.84 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	0.84 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.84 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.40 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	7.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.56 %
Mumia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Mumia	1.68 %
Humibacillus sp. DSM 29435	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus → Humibacillus sp. DSM 29435	0.84 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	0.84 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.84 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig65884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
2170459007\|GJ61VE201CCEO3	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
2170459008\|GA8OVOZ02I6JYX	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
2199352024\|deeps__Contig_125351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300000956\|JGI10216J12902_115013131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → unclassified Humibacillus → Humibacillus sp. DSM 29435	795	Open in IMG/M
3300001398\|JGI20207J14881_1000317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17831	Open in IMG/M
3300001398\|JGI20207J14881_1056056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	690	Open in IMG/M
3300003369\|JGI24140J50213_10111349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	899	Open in IMG/M
3300003369\|JGI24140J50213_10265043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300004081\|Ga0063454_101965248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	516	Open in IMG/M
3300004092\|Ga0062389_100438631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1437	Open in IMG/M
3300004152\|Ga0062386_100888507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300004479\|Ga0062595_101643122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300005172\|Ga0066683_10686039	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005336\|Ga0070680_100905138	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005455\|Ga0070663_100774955	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005529\|Ga0070741_10000590	All Organisms → cellular organisms → Bacteria	126482	Open in IMG/M
3300005529\|Ga0070741_10249986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1690	Open in IMG/M
3300005532\|Ga0070739_10011162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8518	Open in IMG/M
3300005538\|Ga0070731_10901596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300005546\|Ga0070696_100833306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	761	Open in IMG/M
3300005557\|Ga0066704_10397865	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300005598\|Ga0066706_11002838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Mumia	644	Open in IMG/M
3300005712\|Ga0070764_10385716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300005899\|Ga0075271_10077464	Not Available	617	Open in IMG/M
3300006028\|Ga0070717_11857010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300006034\|Ga0066656_10595329	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300006046\|Ga0066652_101794074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300006358\|Ga0068871_100829988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300006638\|Ga0075522_10016593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4716	Open in IMG/M
3300006638\|Ga0075522_10498429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300006755\|Ga0079222_11604100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300006797\|Ga0066659_11430403	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300006800\|Ga0066660_10863531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300009839\|Ga0116223_10331861	All Organisms → cellular organisms → Bacteria → Terrabacteria group	903	Open in IMG/M
3300010038\|Ga0126315_10349154	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300010325\|Ga0134064_10294096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Mumia	616	Open in IMG/M
3300010373\|Ga0134128_10875729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	994	Open in IMG/M
3300010375\|Ga0105239_10834359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1057	Open in IMG/M
3300010375\|Ga0105239_11598581	Not Available	754	Open in IMG/M
3300010379\|Ga0136449_102809866	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300010379\|Ga0136449_103744677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300010937\|Ga0137776_1693727	All Organisms → cellular organisms → Bacteria → Terrabacteria group	573	Open in IMG/M
3300011991\|Ga0120153_1052557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300012204\|Ga0137374_10792793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300012205\|Ga0137362_10952548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300012205\|Ga0137362_11627674	Not Available	532	Open in IMG/M
3300012212\|Ga0150985_113352826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012353\|Ga0137367_10165802	Not Available	1608	Open in IMG/M
3300012469\|Ga0150984_105529571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300012469\|Ga0150984_106950252	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300012685\|Ga0137397_10758021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	720	Open in IMG/M
3300012925\|Ga0137419_11103591	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012960\|Ga0164301_11086641	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012961\|Ga0164302_11604518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300012987\|Ga0164307_10625032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300013100\|Ga0157373_10576665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300013105\|Ga0157369_11526795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300013105\|Ga0157369_12689882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300013768\|Ga0120155_1037838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1488	Open in IMG/M
3300014168\|Ga0181534_10909535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	526	Open in IMG/M
3300014168\|Ga0181534_10955720	Not Available	515	Open in IMG/M
3300014489\|Ga0182018_10251589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300014495\|Ga0182015_10481240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300014497\|Ga0182008_10890658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300014501\|Ga0182024_12907691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	507	Open in IMG/M
3300014638\|Ga0181536_10201233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	992	Open in IMG/M
3300014838\|Ga0182030_10240445	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2088	Open in IMG/M
3300014838\|Ga0182030_10675793	Not Available	975	Open in IMG/M
3300016341\|Ga0182035_11414333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300016422\|Ga0182039_10443441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1111	Open in IMG/M
3300017973\|Ga0187780_10081733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	2221	Open in IMG/M
3300019787\|Ga0182031_1479323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1721	Open in IMG/M
3300020080\|Ga0206350_10159173	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300021073\|Ga0210378_10049565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1657	Open in IMG/M
3300021363\|Ga0193699_10402497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300025604\|Ga0207930_1067554	Not Available	861	Open in IMG/M
3300025854\|Ga0209176_10029408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1166	Open in IMG/M
3300025862\|Ga0209483_1248781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300025909\|Ga0207705_10065549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2626	Open in IMG/M
3300025909\|Ga0207705_10120284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1948	Open in IMG/M
3300025909\|Ga0207705_10537518	Not Available	908	Open in IMG/M
3300025913\|Ga0207695_10683080	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300025916\|Ga0207663_11307630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300025917\|Ga0207660_10334906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300025919\|Ga0207657_10326590	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300025919\|Ga0207657_10653629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	818	Open in IMG/M
3300025924\|Ga0207694_11047523	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300025927\|Ga0207687_11617189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300025929\|Ga0207664_10824644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300025929\|Ga0207664_11793116	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300025929\|Ga0207664_11988857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300026325\|Ga0209152_10470830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300027574\|Ga0208982_1098269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	595	Open in IMG/M
3300027634\|Ga0209905_1050761	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300027773\|Ga0209810_1032241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3070	Open in IMG/M
3300027867\|Ga0209167_10350073	Not Available	803	Open in IMG/M
3300028558\|Ga0265326_10032443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300028577\|Ga0265318_10234078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300028877\|Ga0302235_10081534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1493	Open in IMG/M
3300029915\|Ga0311358_11006095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	573	Open in IMG/M
3300030503\|Ga0311370_12178780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	546	Open in IMG/M
3300030519\|Ga0302193_10294645	Not Available	857	Open in IMG/M
3300030617\|Ga0311356_11318107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10020381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1705	Open in IMG/M
3300031234\|Ga0302325_12339387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	644	Open in IMG/M
3300031239\|Ga0265328_10117983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	988	Open in IMG/M
3300031543\|Ga0318516_10233071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300031561\|Ga0318528_10296327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	868	Open in IMG/M
3300031670\|Ga0307374_10655180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300031711\|Ga0265314_10254139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1007	Open in IMG/M
3300031859\|Ga0318527_10139212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M
3300031902\|Ga0302322_100262370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1923	Open in IMG/M
3300031912\|Ga0306921_12753659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	504	Open in IMG/M
3300031938\|Ga0308175_102322512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300032066\|Ga0318514_10772520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300032783\|Ga0335079_10670911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300033824\|Ga0334840_051328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300033887\|Ga0334790_032671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2131	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.83%
Host-Associated	Host-Associated	19.33%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.95%
Plants	Host-Associated → Plants	19.33%
Aquatic	Environmental → Aquatic	5.88%
Modeled	Engineered → Modeled	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.65%
Peat	Environmental → Terrestrial → Peat	7.56%
Freshwater	Environmental → Aquatic → Freshwater	5.04%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%
Roots	Host-Associated → Plants → Roots	0.84%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.08%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Sand	Environmental → Terrestrial → Soil → Sand	0.84%
Clay	Environmental → Terrestrial → Soil → Clay	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.08%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.04%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.36%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.52%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.68%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.68%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.84%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.84%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.84%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.84%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459008	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005899	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075460

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0884.00003850	2166559005	Simulated	VAVWGVIPERVGIAAGPEARLYRDGLAEYDAVFRRVARKL
L02_02359810	2170459007	Grass Soil	IAVWGVVPERVAIASGPEANLSREGLELYAAVLRKAQG
F48_04758810	2170459008	Grass Soil	VIPERVGIAAGPEARLYRQGLDEYDAVFRRVLRRI
deeps_02269020	2199352024	Soil	VPVWGVVPERVGIAAGPEARLYREGLEEYDKVLRRALRGR
JGI10216J12902_1150131311	3300000956	Soil	IPERVGIAAGPEARLYREGLSEYGTVLQRALRRR*
JGI20207J14881_100031716	3300001398	Arctic Peat Soil	EQKVALWGVIPERVGIAAGPEARLSREGLEGYDAVLRRALRGWY*
JGI20207J14881_10560561	3300001398	Arctic Peat Soil	IWGIIPERVGIASGPEARLYREGLDAYDTVLKKALRKR*
JGI24140J50213_101113493	3300003369	Arctic Peat Soil	ENQVPIWGVIPERVGIASGPEARLYREGLDAYAGVLKKAVRRRS*
JGI24140J50213_102650431	3300003369	Arctic Peat Soil	EIWGVIPERVGIAAGPEARLSRDGLEGYDAVLHRALRGWR*
Ga0063454_1019652481	3300004081	Soil	WWKGEGVPIWGVVPERVGIAAGPEARLYREGLDEYGKVLRYALRSR*
Ga0062389_1004386311	3300004092	Bog Forest Soil	KAEKVPIWGIIPERVGIAAGPEARLFREGLDEYDKVLRKALRRG*
Ga0062386_1008885071	3300004152	Bog Forest Soil	VPVWGIIPERVGIAAGPAGRIHPEGLEQYRAVLKRAMRGAR*
Ga0062595_1016431221	3300004479	Soil	VWGVVPERVGIAAGPEARLYREGLTEYDKVLRRVLRGSR*
Ga0066683_106860391	3300005172	Soil	AWWKTERVPIWGLIPERVGIAAGPEARLYREGRERYATVLQRALRQKH*
Ga0070680_1009051383	3300005336	Corn Rhizosphere	WWKGEGVPIWGVVPERVAIAAGPEARLYREGLAEYDTVLRKALKR*
Ga0070663_1007749551	3300005455	Corn Rhizosphere	DVPIWGVVPERVGIAAGPEARLYREGLDEYGHVLRRVLRSRR*
Ga0070741_100005901	3300005529	Surface Soil	EKVPIWGVVPERVGIAAGPEARLYREGLEEYAKVLRRALRGGR*
Ga0070741_102499861	3300005529	Surface Soil	WGIVPERVGIASGPEARLSREGLALYSGVLRRARGRR*
Ga0070739_100111621	3300005532	Surface Soil	PIWGVIPERVGIAAGPEARLYREGLEEYASVLKRALRRVK*
Ga0070731_109015962	3300005538	Surface Soil	WKGESVPVWAVVPERVGIAAGPESRLYRDGLDEYDRLLRRVLRAL*
Ga0070696_1008333063	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	PIWGVVPERVGIAAGPEARLYRDGLDEYGKVLRRVMRTR*
Ga0066704_103978651	3300005557	Soil	PVWGVVPERVAIAAGPEARLYREGLEEYDAVLRRALRRR*
Ga0066706_110028381	3300005598	Soil	VWGVIPERVGIAAGPESRLYREGLDEYDKVLRRALRGTR*
Ga0070764_103857162	3300005712	Soil	TAGVPVWGVIPERVGIAAGPSGRIYAEGLEEYQGVLKKALRGLR*
Ga0075271_100774642	3300005899	Rice Paddy Soil	GVIPERVGIAAGPEGRLYREGLTEYDAVLRRALRGRR*
Ga0070717_118570102	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KTPIWGIVPERVGIASGPEARLSREGLALYSAVLRRARGRR*
Ga0066656_105953292	3300006034	Soil	IPERVGIASGPEGRLYREGLNEYDAVLKRALRGKR*
Ga0066652_1017940743	3300006046	Soil	WGLIPERVGIAAGPDARLYREGRERYATVLQRALRQKH*
Ga0068871_1008299881	3300006358	Miscanthus Rhizosphere	WGVIPERVGIAAGPEARLYREGLNEYEAVLRRALRKR*
Ga0075522_100165931	3300006638	Arctic Peat Soil	IWGVIPERVGIAAGPEARLYRQGLDEYGSVLRRVLRKR*
Ga0075522_104984291	3300006638	Arctic Peat Soil	EIWGVIPERVGIAAGPEARLSREGLEGYDAVLHRALRGWH*
Ga0079222_116041002	3300006755	Agricultural Soil	VVPERVGIAAGPEARLYRDGLDEYAKMLRRIRRTN*
Ga0066659_114304032	3300006797	Soil	GVIPERVGIAAGPEGRLYREGLNEYDAVLRRALRGKR*
Ga0066660_108635313	3300006800	Soil	WGVIPERVGIASGPEARLDREGLQLYTGVLRRAQRGLR*
Ga0116223_103318611	3300009839	Peatlands Soil	KVPIWGVIPERVGIASGPASRIYREGLEAYQEILRKVMRAVR*
Ga0126315_103491541	3300010038	Serpentine Soil	IWGVIPERVGIAAGPEARLYRDGLDEYGHVLRQVLRSS*
Ga0134064_102940961	3300010325	Grasslands Soil	KVPVWGVIPERVAIAAGPESRLYREGLDEYDKVLRRALRGTR*
Ga0134128_108757291	3300010373	Terrestrial Soil	KKEGVRIWGVIPERVGIAAGPEARLYREGLQGYDGVLRAALRATR*
Ga0105239_108343591	3300010375	Corn Rhizosphere	PIWGVVPERVGIAAGPEARLYRDGLDEYGKVLRRVMRSR*
Ga0105239_115985811	3300010375	Corn Rhizosphere	KVPIWGVVPERVGIAAGPEARLYRDGLDEYGNVLRRVLRAAR*
Ga0136449_1028098662	3300010379	Peatlands Soil	VIPERVGIAAGPEARLYREGLNEYDVVLRRVLRGTR*
Ga0136449_1037446771	3300010379	Peatlands Soil	VPVWGVIPERVGIAAGPEARLYAGGLESYDAVLRRALRQRSS*
Ga0137776_16937272	3300010937	Sediment	RVAVWGVIPERVGIAAGPEARLHREGIERYSAVLRRALRKG*
Ga0120153_10525572	3300011991	Permafrost	AWWKGENVSVWGVIPERVGIAAGPEARLYREGLHEYEAILRRALRKR*
Ga0137374_107927933	3300012204	Vadose Zone Soil	GVVPERVGIAAGPEARLYREGLVEYDKVLRRVLRGRR*
Ga0137362_109525482	3300012205	Vadose Zone Soil	PLWGVIPERVAIAAGPEARLYRQGLEEYDAVLRRALRAR*
Ga0137362_116276741	3300012205	Vadose Zone Soil	AEKVAIWGVIPERVGIAAGPEARLYRQGLDEYDAVLRRVLRAS*
Ga0150985_1133528262	3300012212	Avena Fatua Rhizosphere	WKGESVPIWGVVPERVGIAAGPEARLYRDGLDEYGNVLRRVLRSR*
Ga0137367_101658021	3300012353	Vadose Zone Soil	KEQKVPVWGVIPERVGIAAGPEARLYREGLDEYGTVLLRALRRRR*
Ga0150984_1055295712	3300012469	Avena Fatua Rhizosphere	VPIWAVVPERVGIAAGPESRLYREGLEEYDKALRRALAGR*
Ga0150984_1069502521	3300012469	Avena Fatua Rhizosphere	VPIWGVVPERVGIAAGPEARLYRDGLDEYGSVLRRVLRSR*
Ga0137397_107580212	3300012685	Vadose Zone Soil	VIPERVGIASGPEARLYREGLDAYDAVLKKALRKR*
Ga0137419_111035912	3300012925	Vadose Zone Soil	AEKVPIWGVVPERVGIAAGPEARLYREGLDEYDKVLRRALRAR*
Ga0164301_110866411	3300012960	Soil	WWKGEGGPIWGVVPERVGIAAGPEARLYREGLDEYGKVLRSVLRTR*
Ga0164302_116045181	3300012961	Soil	EKVPVWGVIPERVGIAAGPEARLYRQGLDEYDAVLRRLLRKL*
Ga0164307_106250323	3300012987	Soil	WGVVPERVGIAAGPEARLYREGLDEYGKVLRRVLRAT*
Ga0157373_105766651	3300013100	Corn Rhizosphere	EGVPIWGVIPERVAIAAGPEGRLHREGLDLYADVLRKARARR*
Ga0157369_115267952	3300013105	Corn Rhizosphere	SVWGVIPERVAIAAGPEGRLHREGLDLYADVLRKARARR*
Ga0157369_126898821	3300013105	Corn Rhizosphere	VPVWGVIPERVGIAAGPEARLYRQGLDEYDAVLRRLLRKL*
Ga0120155_10378383	3300013768	Permafrost	VWGVIPERVGIAAGPEARLYREGLNEYEAILRRALRKRA*
Ga0181534_109095352	3300014168	Bog	VWGIIPERVGIASGPESRLYREGLEAYETVLKKAQKAVRKR*
Ga0181534_109557201	3300014168	Bog	IWGIIPERVGIASGPEARLYREGLDAYDAVLKKALRKR*
Ga0182018_102515892	3300014489	Palsa	AWWKEQKVPVWGVIPERVGIAAGPEARLFREGLEEYDAVLRQALRAKRR*
Ga0182015_104812402	3300014495	Palsa	WGVIPERVGIAAGPEARLFREGLEEYDAVLRQALRAKRR*
Ga0182008_108906582	3300014497	Rhizosphere	VWGVIPERVGIAAGPEARLYREGLDLYADVLKRAQRRR*
Ga0182024_129076912	3300014501	Permafrost	PIWGIIPERVGIAAGPEARLYREGLEAYGAVLKKVLRKRSA*
Ga0181536_102012331	3300014638	Bog	GVIPERVAIATGPEARLSREGLEGYDAVLRRALRGRR*
Ga0182030_102404451	3300014838	Bog	QKVEIWGVIPERVGIAAGPEAHLSREGLNGYDAVLSRALRGWK*
Ga0182030_106757931	3300014838	Bog	QKVEIWGVIPERVGIAAGPEAHLSREGLNGYDAVLSRALRAWK*
Ga0182035_114143333	3300016341	Soil	PVWGVVPERVGIAAGPEARLHRDGLEHYSGVLKRATRAAR
Ga0182039_104434411	3300016422	Soil	AYWRSEQVPVWGVVPERVGIAAGPEARLHRDGLEHYSGVLKRATRAAR
Ga0187780_100817331	3300017973	Tropical Peatland	PVWGVVPERVAIASGPASSLSAEGLEHYDKVLRRAIAKPR
Ga0182031_14793232	3300019787	Bog	EAAITWWKEQKIEIWGVIPERVGIAAGPERRLSREGVEGYDSVLHQALRGWR
Ga0206350_101591731	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	IPERVGIAAGPEGRLYREGLNEYDAVLRRALRGKR
Ga0210378_100495654	3300021073	Groundwater Sediment	WGVIPERVGIAAGPEARLYREGLNEYGTVLQRALRRRR
Ga0193699_104024972	3300021363	Soil	ENVPVWGVIPERVGIAAGPEARLYRDGLTEYDTVLRRALRKR
Ga0207930_10675541	3300025604	Arctic Peat Soil	WWKEQKMEVWGVIPERVGIAAGPEARLSREGLEGYDAVLHQALRGWR
Ga0209176_100294082	3300025854	Arctic Peat Soil	AERVPIWGVIPERVGIASGPESKLYREGLDAYDAVLKKALRKRWQ
Ga0209483_12487812	3300025862	Arctic Peat Soil	VALWGVIPERVGIAAGPEARLSREGLEGYDAVLRRALRGWH
Ga0207705_100655491	3300025909	Corn Rhizosphere	VIPERVGIAAGPEARLYREGLIEYDTVLRRALRKR
Ga0207705_101202841	3300025909	Corn Rhizosphere	RAEKVPIWGVIPERVGIAAGPEARLYRQGLDEYDAVLRRALRGR
Ga0207705_105375184	3300025909	Corn Rhizosphere	PIWGVVPERVGIAAGPEARLYRDGLDEYDSVLKRVLRGR
Ga0207695_106830801	3300025913	Corn Rhizosphere	WGVIPERVGIAAGPEGRLYREGLNEYDAVLRRALRGKR
Ga0207663_113076301	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AWWKGENVAVWGVIPERVGIAAGPEARLYRDGLAEYDAVFRRVARKL
Ga0207660_103349062	3300025917	Corn Rhizosphere	VSVWGVIPERVAIAAGPEGRLHREGLDLYADVLRKARARR
Ga0207657_103265903	3300025919	Corn Rhizosphere	GVVPERVGIAAGPGARLYREGLDEYGHVLRRVLRSRR
Ga0207657_106536292	3300025919	Corn Rhizosphere	VIPERVGIAAGPEARLYREGLNEYETVLRRALRKR
Ga0207694_110475233	3300025924	Corn Rhizosphere	GVVPERVAIAAGPEARLYREGLAEYDTVLRKALKR
Ga0207687_116171891	3300025927	Miscanthus Rhizosphere	KNENVPIWGVVPERVGIAAGPEARLYRDGLDEYGKVLRRVMRTR
Ga0207664_108246442	3300025929	Agricultural Soil	KLPIWGVIPERVGIAAGPDARLNRDGLDHYAGVLRRALRQAH
Ga0207664_117931162	3300025929	Agricultural Soil	GVAIWGVIPERVGIAAGPESRLYREGLDLYADVLKRAQRRR
Ga0207664_119888571	3300025929	Agricultural Soil	GVVPERVGIAAGPEARLYREGLDEYGKVLRRVLRATRSTAH
Ga0209152_104708302	3300026325	Soil	IPERVGIAAGPEARLYREGLDLYDEVLRKALRKRA
Ga0208982_10982691	3300027574	Forest Soil	PERVGIAAGPEARLYREGLDEYDAVLKKALRKRPG
Ga0209905_10507612	3300027634	Thawing Permafrost	EIWGVIPERVGIAAGPEARLSREGLEGYDVVLSRALRGWR
Ga0209810_10322411	3300027773	Surface Soil	PIWGVIPERVGIAAGPEARLYREGLEEYASVLKRALRRVK
Ga0209167_103500731	3300027867	Surface Soil	PERVAIASGPEARLSREGIEAYAGVLRRATRRRPH
Ga0265326_100324433	3300028558	Rhizosphere	WWKSQSVAIWGVIPERVGVAAGPEARLYREGLNEYDVVLRRALRRTR
Ga0265318_102340784	3300028577	Rhizosphere	QKVAIWGVIPERVGIAAGPESRLYREGLNEYAAVLRRALRGAR
Ga0302235_100815344	3300028877	Palsa	SKVPIWGIIPERVGIASGPEARLYREGLDAYDAVLKKALRKR
Ga0311358_110060952	3300029915	Bog	WGIIPERVGIASGPEARLYREGLDAYSAVLKKAIRKRPS
Ga0311370_121787802	3300030503	Palsa	IVPERVGIAAGPEARLYRDGLDEYDAVLKKALRKRPG
Ga0302193_102946451	3300030519	Bog	IPERVGIAAGPESKLYRDGIEAYDAVLKKALRKRQA
Ga0311356_113181072	3300030617	Palsa	VPIWGVIPERVGIATGPAGRIYREGLEAYQEILRKVMRAALR
(restricted) Ga0255310_100203811	3300031197	Sandy Soil	WWREQKTPIWGIVPERVGIASGPEARLSREGLALYAAVLRRARR
Ga0302325_123393871	3300031234	Palsa	VAIWGVVPERVGIAAGPEARLFRDGLESYEAILRTILKQRRSRAAR
Ga0265328_101179832	3300031239	Rhizosphere	QSVAIWGVIPERVGVAAGPEARLYREGLNEYDVVLRRALRRTR
Ga0318516_102330712	3300031543	Soil	KSQNVPIWGVVPERVGIAAGPEARLYRDGLDEYGKVFRRVLRTS
Ga0318528_102963271	3300031561	Soil	VWGVVPERVGIAAGPEARLHRDGLEHYSGVLKRATRAAR
Ga0307374_106551801	3300031670	Soil	IAWWKEQKVELWGVIPERVGIAAGPEARLSREGLEGYDAVLRRALRGWH
Ga0265314_102541391	3300031711	Rhizosphere	SQSVTIWGVIPERVGVAAGPEARLYREGLNEYDVVLRRALRRTR
Ga0318527_101392121	3300031859	Soil	VPVWGVVPERVGIAAGPEARLHRDGLEHYSGVLKRATRAAR
Ga0302322_1002623701	3300031902	Fen	VWGVIPERVGIAAGPEARLYRDGLHEYEAILRRALRKR
Ga0306921_127536591	3300031912	Soil	IWGVIPERVGIAAGPEARLFREGLDAYDAVLKKALRRRSG
Ga0308175_1023225123	3300031938	Soil	EGVPVWGVVPERVAIAAGPEARLYREGLDEYDGVLRKALRGR
Ga0318514_107725201	3300032066	Soil	WRAEKVPIWGVIPERVGIAAGPEARLYRPGLNEYDAVLRRALRSRRRD
Ga0335079_106709111	3300032783	Soil	IPERVGIAAGPDARLYREGLNEYDKVLRRALRGKR
Ga0334840_051328_1081_1206	3300033824	Soil	MEIWGVIPERVGIAAGPERRLSREGLEGYDAVLHQALRGWR
Ga0334790_032671_2002_2130	3300033887	Soil	KLEIWGVIPERVGIAAGPEARLSREGLEGYDAVLNRALRGWR

Hidden Markov Model


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