Metagenome / Metatranscriptome Family F075440

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075440
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	103 residues
Representative Sequence	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD
Number of Associated Samples	88
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	30.25 %
% of genes from short scaffolds (< 2000 bps)	82.35 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.866 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.689 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.15% β-sheet: 0.00% Coil/Unstructured: 28.85%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF03401	TctC	22.69
PF00355	Rieske	4.20
PF01032	FecCD	3.36
PF00005	ABC_tran	1.68
PF01381	HTH_3	0.84
PF02776	TPP_enzyme_N	0.84
PF00501	AMP-binding	0.84
PF13560	HTH_31	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	22.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.87 %
Unclassified	root	N/A	36.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.87 %
Unclassified	root	N/A	36.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.87 %
Unclassified	root	N/A	36.13 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.66 %
Unclassified	root	N/A	36.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49.58 %
Unclassified	root	N/A	36.13 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.36 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.84 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41.18 %
Unclassified	root	N/A	36.13 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.04 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.52 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	27.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.04 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	3.36 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.84 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.84 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	27.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.04 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2.52 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.84 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.84 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	27.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.04 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2.52 %
Frigoriglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus	0.84 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.84 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	27.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.04 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2.52 %
Frigoriglobus tundricola	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus → Frigoriglobus tundricola	0.84 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.84 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.13 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	27.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.04 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2.52 %
Rhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp.	0.84 %
Frigoriglobus tundricola	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus → Frigoriglobus tundricola	0.84 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_101810558	Not Available	824	Open in IMG/M
3300002568\|C688J35102_120975160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4100	Open in IMG/M
3300003911\|JGI25405J52794_10076659	Not Available	733	Open in IMG/M
3300004633\|Ga0066395_10338336	Not Available	833	Open in IMG/M
3300004778\|Ga0062383_10570900	Not Available	572	Open in IMG/M
3300005186\|Ga0066676_10160886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1419	Open in IMG/M
3300005332\|Ga0066388_100005943	All Organisms → cellular organisms → Bacteria → Proteobacteria	8626	Open in IMG/M
3300005332\|Ga0066388_100052157	All Organisms → cellular organisms → Bacteria → Proteobacteria	4218	Open in IMG/M
3300005332\|Ga0066388_100466266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1903	Open in IMG/M
3300005332\|Ga0066388_100766761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1562	Open in IMG/M
3300005332\|Ga0066388_101255713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1272	Open in IMG/M
3300005332\|Ga0066388_101384306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1220	Open in IMG/M
3300005332\|Ga0066388_101432665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1203	Open in IMG/M
3300005332\|Ga0066388_104003561	Not Available	751	Open in IMG/M
3300005332\|Ga0066388_106322463	Not Available	598	Open in IMG/M
3300005332\|Ga0066388_107924503	Not Available	531	Open in IMG/M
3300005446\|Ga0066686_10067494	All Organisms → cellular organisms → Bacteria → Proteobacteria	2232	Open in IMG/M
3300005547\|Ga0070693_100866479	Not Available	674	Open in IMG/M
3300005713\|Ga0066905_100032461	All Organisms → cellular organisms → Bacteria → Proteobacteria	2982	Open in IMG/M
3300005713\|Ga0066905_100408055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1104	Open in IMG/M
3300005713\|Ga0066905_100575537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp.	949	Open in IMG/M
3300005764\|Ga0066903_101420474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1305	Open in IMG/M
3300005764\|Ga0066903_104906755	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005833\|Ga0074472_10827051	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300005833\|Ga0074472_11311384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1812	Open in IMG/M
3300005841\|Ga0068863_100130764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2397	Open in IMG/M
3300005983\|Ga0081540_1039107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2490	Open in IMG/M
3300006046\|Ga0066652_100161449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1890	Open in IMG/M
3300006604\|Ga0074060_10573900	Not Available	634	Open in IMG/M
3300006606\|Ga0074062_10209704	Not Available	755	Open in IMG/M
3300006755\|Ga0079222_10291912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1058	Open in IMG/M
3300006954\|Ga0079219_10778589	Not Available	746	Open in IMG/M
3300009012\|Ga0066710_101440084	Not Available	1066	Open in IMG/M
3300009090\|Ga0099827_10921663	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300009094\|Ga0111539_10342297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1741	Open in IMG/M
3300009137\|Ga0066709_100821772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1348	Open in IMG/M
3300009143\|Ga0099792_10001591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8460	Open in IMG/M
3300009792\|Ga0126374_10414523	Not Available	946	Open in IMG/M
3300009821\|Ga0105064_1029352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1029	Open in IMG/M
3300010043\|Ga0126380_11098664	Not Available	678	Open in IMG/M
3300010046\|Ga0126384_10085698	All Organisms → cellular organisms → Bacteria → Proteobacteria	2283	Open in IMG/M
3300010046\|Ga0126384_10370485	All Organisms → cellular organisms → Bacteria → Proteobacteria	1200	Open in IMG/M
3300010046\|Ga0126384_10969815	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300010046\|Ga0126384_11907392	Not Available	566	Open in IMG/M
3300010047\|Ga0126382_10484230	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300010047\|Ga0126382_11065224	Not Available	714	Open in IMG/M
3300010047\|Ga0126382_11204624	Not Available	678	Open in IMG/M
3300010358\|Ga0126370_10167493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1622	Open in IMG/M
3300010359\|Ga0126376_10279630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1438	Open in IMG/M
3300010359\|Ga0126376_12655639	Not Available	550	Open in IMG/M
3300010360\|Ga0126372_10654935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1017	Open in IMG/M
3300010360\|Ga0126372_10811131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	928	Open in IMG/M
3300010360\|Ga0126372_12071308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	617	Open in IMG/M
3300010362\|Ga0126377_10378252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1421	Open in IMG/M
3300010362\|Ga0126377_10441110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1322	Open in IMG/M
3300010362\|Ga0126377_10697110	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus → Frigoriglobus tundricola	1068	Open in IMG/M
3300010362\|Ga0126377_12828583	Not Available	559	Open in IMG/M
3300010366\|Ga0126379_10298593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1615	Open in IMG/M
3300010366\|Ga0126379_11022646	Not Available	931	Open in IMG/M
3300010398\|Ga0126383_10128079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2328	Open in IMG/M
3300010398\|Ga0126383_11497633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	764	Open in IMG/M
3300010403\|Ga0134123_10623099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1041	Open in IMG/M
3300012199\|Ga0137383_10215817	All Organisms → cellular organisms → Bacteria → Proteobacteria	1406	Open in IMG/M
3300012204\|Ga0137374_10138853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2196	Open in IMG/M
3300012206\|Ga0137380_10358422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1300	Open in IMG/M
3300012208\|Ga0137376_11031103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	704	Open in IMG/M
3300012211\|Ga0137377_10133050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2377	Open in IMG/M
3300012212\|Ga0150985_105898564	Not Available	770	Open in IMG/M
3300012355\|Ga0137369_10080089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2741	Open in IMG/M
3300012685\|Ga0137397_10047299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3083	Open in IMG/M
3300012922\|Ga0137394_10033842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4164	Open in IMG/M
3300012925\|Ga0137419_10731777	Not Available	805	Open in IMG/M
3300012927\|Ga0137416_10767114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	851	Open in IMG/M
3300012944\|Ga0137410_10386823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1125	Open in IMG/M
3300012948\|Ga0126375_10682656	Not Available	797	Open in IMG/M
3300012948\|Ga0126375_11368758	Not Available	598	Open in IMG/M
3300012948\|Ga0126375_12023212	Not Available	510	Open in IMG/M
3300014154\|Ga0134075_10279669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	725	Open in IMG/M
3300014969\|Ga0157376_10357264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1400	Open in IMG/M
3300015051\|Ga0137414_1172035	Not Available	7006	Open in IMG/M
3300015372\|Ga0132256_100257920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1815	Open in IMG/M
3300015374\|Ga0132255_103964745	Not Available	628	Open in IMG/M
3300017656\|Ga0134112_10364014	Not Available	592	Open in IMG/M
3300017944\|Ga0187786_10148175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	845	Open in IMG/M
3300018028\|Ga0184608_10039259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1821	Open in IMG/M
3300018071\|Ga0184618_10311304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	671	Open in IMG/M
3300018076\|Ga0184609_10351811	Not Available	687	Open in IMG/M
3300018081\|Ga0184625_10154346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1199	Open in IMG/M
3300018482\|Ga0066669_12003117	Not Available	542	Open in IMG/M
3300020170\|Ga0179594_10035252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1621	Open in IMG/M
3300020170\|Ga0179594_10131291	Not Available	918	Open in IMG/M
3300021086\|Ga0179596_10715151	Not Available	507	Open in IMG/M
3300021560\|Ga0126371_12917997	Not Available	579	Open in IMG/M
3300022534\|Ga0224452_1135892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	757	Open in IMG/M
3300025915\|Ga0207693_10393188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1084	Open in IMG/M
3300026324\|Ga0209470_1087252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1419	Open in IMG/M
3300026555\|Ga0179593_1068549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3969	Open in IMG/M
3300027273\|Ga0209886_1024406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	911	Open in IMG/M
3300027654\|Ga0209799_1059449	Not Available	857	Open in IMG/M
3300027716\|Ga0209682_10007429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2818	Open in IMG/M
3300027874\|Ga0209465_10155005	Not Available	1138	Open in IMG/M
3300027903\|Ga0209488_10000457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	34185	Open in IMG/M
3300027907\|Ga0207428_10208458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1469	Open in IMG/M
3300027910\|Ga0209583_10513511	Not Available	594	Open in IMG/M
3300027915\|Ga0209069_10103170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1379	Open in IMG/M
3300028536\|Ga0137415_10316482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1364	Open in IMG/M
3300030521\|Ga0307511_10371581	Not Available	603	Open in IMG/M
3300031152\|Ga0307501_10133920	Not Available	659	Open in IMG/M
3300031184\|Ga0307499_10009035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1997	Open in IMG/M
3300031184\|Ga0307499_10069659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	905	Open in IMG/M
3300031184\|Ga0307499_10168202	Not Available	655	Open in IMG/M
3300031198\|Ga0307500_10055984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	966	Open in IMG/M
3300031226\|Ga0307497_10229876	Not Available	819	Open in IMG/M
3300031455\|Ga0307505_10454472	Not Available	614	Open in IMG/M
3300031720\|Ga0307469_10871821	Not Available	832	Open in IMG/M
3300031740\|Ga0307468_100242328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1260	Open in IMG/M
3300032174\|Ga0307470_10036660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2391	Open in IMG/M
3300032180\|Ga0307471_100503575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1359	Open in IMG/M
3300034818\|Ga0373950_0141730	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.76%
Host-Associated	Host-Associated	9.24%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.51%
Aquatic	Environmental → Aquatic	9.24%
Plants	Host-Associated → Plants	9.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.51%
Sediment	Environmental → Aquatic → Sediment	7.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.20%
Freshwater	Environmental → Aquatic → Freshwater	1.68%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.50%
Loam	Environmental → Terrestrial → Soil → Loam	18.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.68%
Sand	Environmental → Terrestrial → Soil → Sand	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.52%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.68%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1018105582	3300001431	Soil	MASEIETYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD*
C688J35102_1209751605	3300002568	Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLLQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD*
JGI25405J52794_100766591	3300003911	Tabebuia Heterophylla Rhizosphere	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWDDEEID*
Ga0066395_103383361	3300004633	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRSLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDEEDID*
Ga0062383_105709002	3300004778	Wetland Sediment	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAIADDLQDAAAMVPSDWPTRDQLRGLLAEIATSKDQLVQKWNAVPERIRNAMPNKRPDAVGDDWDEEDIE*
Ga0066676_101608861	3300005186	Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0066388_1000059434	3300005332	Tropical Forest Soil	MASEIEAYLDAFDEVQQLLVQLAAVVDKINSVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATSKDQLARKWSAVPERIRDAMPNKRPDMVDADWEEDTD*
Ga0066388_1000521572	3300005332	Tropical Forest Soil	MASEIEAYLDAFEDVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDDEEID*
Ga0066388_1004662663	3300005332	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0066388_1007667611	3300005332	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0066388_1012557133	3300005332	Tropical Forest Soil	YLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0066388_1013843062	3300005332	Tropical Forest Soil	MASEIETYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWDDEEID*
Ga0066388_1014326651	3300005332	Tropical Forest Soil	MASEIETYLDAFEEVQALLVQLAAVVDKINSVTDAIADDAGDAAAMIPQDWPTRDELKSLLEKVATSKDDLELKWAAIPERIRSAMPNKRPDMVDEDWDEDND*
Ga0066388_1040035612	3300005332	Tropical Forest Soil	MASEIEVYLDAFDEVQQLLVQLSAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATSKDDLAAKWNAVPERIRDAMPNKRPDMVDEDWDEDVD*
Ga0066388_1063224631	3300005332	Tropical Forest Soil	RLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDDEEID*
Ga0066388_1079245032	3300005332	Tropical Forest Soil	DAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0066686_100674943	3300005446	Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWEEEDID*
Ga0070693_1008664792	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MASEIETYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDI
Ga0066905_1000324612	3300005713	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWDDEEID*
Ga0066905_1004080552	3300005713	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDA
Ga0066905_1005755372	3300005713	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKDQLIQKWNAVPERIRNAMPNKRPDAVSDDWEEEDID*
Ga0066903_1014204741	3300005764	Tropical Forest Soil	AKMASEIEAYLDAFEDVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDDEEID*
Ga0066903_1049067552	3300005764	Tropical Forest Soil	MASEIEVYLDAFDEVQQLLVQLSAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATQKDDLAAKWNAVPERIRDAMPNKRPDMVDEDWDEDVD*
Ga0074472_108270511	3300005833	Sediment (Intertidal)	MASEIEAYLDAFEEVQGLLKRLSVVVDQINAVAEAITDDLQDAAAMIPSDWPTRDQLRTLLAEVASSKDRLEQKWNAVPERIRNAMPNKRPDMVGEDWDEDAE*
Ga0074472_113113843	3300005833	Sediment (Intertidal)	MASEIEAYLDAFEEVQGLLKRLTVVVDQINAVAEAITDDLQDAAAMIPSDWPTRDQLRTLLAEIATSKDQLERKWNAVPERIRNAMPNKRPDMVGEDWDEDAE*
Ga0068863_1001307641	3300005841	Switchgrass Rhizosphere	MASEIETYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0081540_10391071	3300005983	Tabebuia Heterophylla Rhizosphere	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWNAVPERIRNAMPNKRPDAVSDDWDDEEID*
Ga0066652_1001614492	3300006046	Soil	MASEIETYLDAFEEVQALLVQLAAVVDKINSVTDAIADDAGDAAAMIPQDWPTRDELKSLLEKVATSKDDLELKWAAIPERIRNAMPNKRPDMVDEDWDEDND*
Ga0074060_105739001	3300006604	Soil	EIEMYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWEEEDID*
Ga0074062_102097041	3300006606	Soil	MASEIEMYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWEEEDID*
Ga0079222_102919122	3300006755	Agricultural Soil	MASEIETYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0079219_107785891	3300006954	Agricultural Soil	KRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLLQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0066710_1014400842	3300009012	Grasslands Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAIVPSDWPTRDQLRGLLSEIATSKEQLIQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD
Ga0099827_109216631	3300009090	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLIQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0111539_103422972	3300009094	Populus Rhizosphere	MASEIETYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDDVSDDWDEEDID*
Ga0066709_1008217721	3300009137	Grasslands Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLIQKWSAVPERIRNAMPNKRPDAVSDDW
Ga0099792_100015914	3300009143	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLLQKWNAVPERIRNAMPNKRPDAISDDWDEEDVD*
Ga0126374_104145232	3300009792	Tropical Forest Soil	AKMASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDDEEID*
Ga0105064_10293522	3300009821	Groundwater Sand	MASEIEAYLDAFEEVQRLLMRLSAMADQINAVAEAIADDPRDAAAMIPPDWPTRDQLRGLLAEIATSQDQLALKWKAVPERIRNAMPNKRPDMVGEDWDEDTE*
Ga0126380_110986641	3300010043	Tropical Forest Soil	MRALAEDCAMASEIEVYLDAFDEVQQLLVQLSAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATQKDDLAAKWNAVPERIRDAMPNKRPDMVDEDWDEDVD*
Ga0126384_100856982	3300010046	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKDQLIQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0126384_103704852	3300010046	Tropical Forest Soil	MPALAEDCVMASEIEVYLDAFDEVQELLVQLAAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATSKDDLATKWNAVPERIRDAMPNKRPDMVDQDWDEDVD*
Ga0126384_109698152	3300010046	Tropical Forest Soil	MSRLTGRLAKMASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWNAVPERIRNAMPNKRPDAVSDDWDDEEID*
Ga0126384_119073922	3300010046	Tropical Forest Soil	KMASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0126382_104842302	3300010047	Tropical Forest Soil	PPLGNADRPFAIARRVANMRPLAEDCAMASEIEVYLDAFDEVQQLLVQLSAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATSKDDLATKWNAVPERIRDAMPNKRPDMVDEDWDEDVD*
Ga0126382_110652242	3300010047	Tropical Forest Soil	MASEIEAYLDSFEAVQRLLMRLSAVADQINMVAEALDDDPRDAAAMIPSDWPTRDQLRALLEEAANSQDQLALQWNKLPERIRNAMSNKRPEMVGEDWDDEDMD*
Ga0126382_112046241	3300010047	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDDEEID*
Ga0126370_101674933	3300010358	Tropical Forest Soil	MASDIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRSLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDEEDID*
Ga0126376_102796302	3300010359	Tropical Forest Soil	MRPLAEDCAMASEIEVYLDAFDEVQQLLVQLSAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATQKDDLAAKWNAVPERIRDAMPNKRPDMVDEDWDEDVD*
Ga0126376_126556392	3300010359	Tropical Forest Soil	EDCEMASEIETYLDAFEEVQRLLKKLSAMADQINAVAEAIADDPRDAAAMIPPDWPTRDQLRGLLAEIASSQDQLALKWKAVPERIRNAMPNKRPDMVGEDWDEDSD*
Ga0126372_106549351	3300010360	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLLQKWSAVPERIRNA
Ga0126372_108111313	3300010360	Tropical Forest Soil	LIGRLAKMASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0126372_120713082	3300010360	Tropical Forest Soil	MRALAEDCAMASEIEVYLDAFDEVQQLLVQLSAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATQKDDLAAKWNAVPERIRDAMPNKR
Ga0126377_103782522	3300010362	Tropical Forest Soil	MRALAEDCAMASEIEVYLDAFDEVQQLLVQLSAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATSKDDLAAKWNAVPERIRDAMPNKRPDMVDEDWDEDVD*
Ga0126377_104411102	3300010362	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLVQKWNAVPERIRNAMPNKRPDAVS
Ga0126377_106971102	3300010362	Tropical Forest Soil	MTALLEDCEMASEIETYLDAFEEVQRLLKKLSAMADQINAVAEAIADDPRDAAAMIPPDWPTRDQLRGLLAEIASSQDQLALKWKAVPERIRNAMPNKRPDMVGEDWDEDSD*
Ga0126377_128285832	3300010362	Tropical Forest Soil	MAGISEEFVMPSEIESYLDAFEEVQRLLVQLAAVVDKINGVTDAIADDARDAAAMIPNDWPTRDELRALLEQVATSKDELELKWAAIPERIRNAMPNKRPDMVDADWDEDND*
Ga0126379_102985933	3300010366	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWNAVPERIRNAM
Ga0126379_110226461	3300010366	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRSLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0126383_101280792	3300010398	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKDQLIQKWHAVPERIRNAMPNKRPDAVGDDWDEEDID*
Ga0126383_114976331	3300010398	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKDQLIQKWNAVPERIRNAMPNKRPDAVSDDWEEEDID*
Ga0134123_106230991	3300010403	Terrestrial Soil	MASEIETYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEED
Ga0137383_102158172	3300012199	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKGQLIQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0137374_101388535	3300012204	Vadose Zone Soil	MASEIEVYLDEFEGVQRLLVQLAVVVYKINGVTDAIADDPRDAAAMIPSDWPTRDQLRELLEQVANSKDELARKWSAVPERIRNAMPNKRPDMVDEDWEEDSE*
Ga0137380_103584222	3300012206	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLIQKWSAVPERIRNAMPNKRPDAVSDDWDEEDAD*
Ga0137376_110311031	3300012208	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLIQKWSAVPERIRNAMPNKRPDAVSD
Ga0137377_101330501	3300012211	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKGQLIQKWSTVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0150985_1058985641	3300012212	Avena Fatua Rhizosphere	MASEIEVYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLLQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0137369_100800892	3300012355	Vadose Zone Soil	MASEIEVYLDEFEGVQRLLVQLAVVVDKINGVTDAIADDPRDAAAMIPSDWPTRDQLRELLEQVANSKDELARKWSAVPERIRNAMPNKRPDMVDEDWEEDSE*
Ga0137397_100472992	3300012685	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKDQLLQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0137394_100338423	3300012922	Vadose Zone Soil	MASEIEMYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKDQLLQKWSAVPERIRNAMPNKRPDAVSDDWDEEDAD*
Ga0137419_107317772	3300012925	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLLQKWNAVPERIRNAMPNKRPDAISDDWDEEDAD*
Ga0137416_107671141	3300012927	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD*
Ga0137410_103868231	3300012944	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGVLSEIATSKEQRIQKWSGVPERIRNA
Ga0126375_106826561	3300012948	Tropical Forest Soil	LDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDDEEID*
Ga0126375_113687581	3300012948	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDEEDID*
Ga0126375_120232121	3300012948	Tropical Forest Soil	EAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKDQLIQKWNAVPERIRNAMPNKRPDAVSDDWEEEDID*
Ga0134075_102796692	3300014154	Grasslands Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIKKWHAVPERIRNAMPNKRPDAVSDDWDDEEID*
Ga0157376_103572642	3300014969	Miscanthus Rhizosphere	MASEIETYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLCGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0137414_117203516	3300015051	Vadose Zone Soil	MPPDWEAFKDGVGIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEHFFKVERGARAHQECHAQQAADAISDDWDEEDVD*
Ga0132256_1002579202	3300015372	Arabidopsis Rhizosphere	MASEIETYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKGPDAVSDDWDEEDID*
Ga0132255_1039647451	3300015374	Arabidopsis Rhizosphere	KMASEIETYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID*
Ga0134112_103640141	3300017656	Grasslands Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLIKKWHAVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0187786_101481752	3300017944	Tropical Peatland	MASEIETYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0184608_100392592	3300018028	Groundwater Sediment	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKDQLLQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD
Ga0184618_103113042	3300018071	Groundwater Sediment	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKDQLLQKWSAVPERIRNAMPNKRPD
Ga0184609_103518111	3300018076	Groundwater Sediment	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAIADDLQDAAAMVPSDWPTRDQLRGLLAEIASSKDQLVQKWNAVPERIRNAMPNKRPDVVGDDWDEEEID
Ga0184625_101543463	3300018081	Groundwater Sediment	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAIADDLQDAAAMVPSDWPTRDQLRGLLAEIATSKDQLVQKWNAVPERIRNAMPNKRPDVVGDDWDEEEID
Ga0066669_120031171	3300018482	Grasslands Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLLQKWSVVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0179594_100352522	3300020170	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLIQKWSAVPERIRNAMPNKRPDAVSDDWDEEDAD
Ga0179594_101312911	3300020170	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKDQLLQKWSAVPERIRNAMPNKRPDAVSDDWDEEDAD
Ga0179596_107151511	3300021086	Vadose Zone Soil	TGRLLKMASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLLQKWNAVPERIRNAMPNKRPDAISDDWDEEDVD
Ga0126371_129179971	3300021560	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0224452_11358922	3300022534	Groundwater Sediment	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKDQLLQKWSAVPERIRNAMPNKRPDAV
Ga0207693_103931882	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MASEIETYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0209470_10872522	3300026324	Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0179593_10685494	3300026555	Vadose Zone Soil	MASEIEAYLDAFEEVQQLLVQLAGVVDKINGVTDAIADDPRDAAAMIPADWPTRDQLRALLEKVANSKDELELKWSTIPERIRNAMPNKRPDMVDEDWEEDTD
Ga0209886_10244062	3300027273	Groundwater Sand	LEDCIMASEIEAYLDAFEAVQRLLQRLSAAADQINMVAEAFEDDPRDAAAMIPSDWPTRDQLRALLEEVANSKDQLALQWNKLPERIRNAMSNKRPEMVDEDWDEDTD
Ga0209799_10594492	3300027654	Tropical Forest Soil	VYLDAFDEVQELLVQLAAVVDKINAVTDAIADDPRDAAAMIPSDWPTKDELRALLEEVATSKDDLATKWNAVPERIRDAMPNKRPDMVDQDWDEDVD
Ga0209682_100074292	3300027716	Wetland Sediment	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAIADDLQDAAAMVPSDWPTRDQLRGLLAEIATSKDQLVQKWNAVPERIRNAMPNKRPDAVGDDWDEEDIE
Ga0209465_101550052	3300027874	Tropical Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRSLLAEIATSKEQLIQKWHAVPERIRNAMPNKRPDAVGDDWDEEDID
Ga0209488_1000045732	3300027903	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLLQKWNAVPERIRNAMPNKRPDAISDDWDEEDVD
Ga0207428_102084582	3300027907	Populus Rhizosphere	MASEIETYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0209583_105135111	3300027910	Watersheds	DAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRSLLSEIASSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD
Ga0209069_101031702	3300027915	Watersheds	MASEIETYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWEEEDID
Ga0137415_103164821	3300028536	Vadose Zone Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLIQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD
Ga0307511_103715811	3300030521	Ectomycorrhiza	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLLQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD
Ga0307501_101339202	3300031152	Soil	KMASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKDQLLQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD
Ga0307499_100090351	3300031184	Soil	SEIEMYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWEEEDID
Ga0307499_100696592	3300031184	Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLLQKWSAVPERIRNAMPNKRPDAVSDDWEEEDVD
Ga0307499_101682021	3300031184	Soil	AFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLLQKWSAVPERIRNAMPNKRPDAVSDDWDEEDVD
Ga0307500_100559842	3300031198	Soil	MASEIEMYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWEEEDID
Ga0307497_102298762	3300031226	Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIASSKEQLLQKWNAVPERIRNAMPNKRPDAVSDDWDEEDTD
Ga0307505_104544722	3300031455	Soil	MASEIEMYLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRP
Ga0307469_108718212	3300031720	Hardwood Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDVD
Ga0307468_1002423282	3300031740	Hardwood Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRSLLSEIATSKEQLIQKWNAVPERIRNAMPNKRPDAVSDDWDDEDID
Ga0307470_100366601	3300032174	Hardwood Forest Soil	ASEIETYLDAFEEVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0307471_1005035752	3300032180	Hardwood Forest Soil	MASEIEAYLDAFEEVQRLLKRLSAVVDQINSVAEAITDDLQDAAAMVPSDWPTRDQLRSLLSEIATSKEQLIQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID
Ga0373950_0141730_251_544	3300034818	Rhizosphere Soil	YLDAFEDVQRLLKRLSAVVDQINSVAEAISDDLQDAAAMVPSDWPTRDQLRGLLSEIATSKEQLVQKWNAVPERIRNAMPNKRPDAVSDDWDEEDID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075440

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences