NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075383

Metagenome / Metatranscriptome Family F075383

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075383
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 70 residues
Representative Sequence FPDAGGERFGGAPDPARDRNDAESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Number of Associated Samples 109
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.36 %
% of genes near scaffold ends (potentially truncated) 96.64 %
% of genes from short scaffolds (< 2000 bps) 95.80 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.319 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(24.370 % of family members)
Environment Ontology (ENVO) Unclassified
(31.092 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.899 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF05960DUF885 6.72
PF01471PG_binding_1 3.36
PF01699Na_Ca_ex 2.52
PF01757Acyl_transf_3 2.52
PF00211Guanylate_cyc 1.68
PF07927HicA_toxin 0.84
PF02371Transposase_20 0.84
PF14559TPR_19 0.84
PF12848ABC_tran_Xtn 0.84
PF02129Peptidase_S15 0.84
PF00903Glyoxalase 0.84
PF13602ADH_zinc_N_2 0.84
PF15919HicB_lk_antitox 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG4805Uncharacterized conserved protein, DUF885 familyFunction unknown [S] 6.72
COG0387Cation (Ca2+/Na+/K+)/H+ antiporter ChaAInorganic ion transport and metabolism [P] 2.52
COG0530Ca2+/Na+ antiporterInorganic ion transport and metabolism [P] 2.52
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 1.68
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.84
COG3547TransposaseMobilome: prophages, transposons [X] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.32 %
UnclassifiedrootN/A1.68 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886007|SwRhRL2b_contig_2708695All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300003203|JGI25406J46586_10198116All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300004157|Ga0062590_103051912All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium502Open in IMG/M
3300005166|Ga0066674_10438815All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300005172|Ga0066683_10523893All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300005179|Ga0066684_10397185All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium925Open in IMG/M
3300005180|Ga0066685_11163615All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005186|Ga0066676_10933537All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia580Open in IMG/M
3300005187|Ga0066675_11177609All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300005294|Ga0065705_10549350All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300005332|Ga0066388_102964366All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium867Open in IMG/M
3300005332|Ga0066388_107867381All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005364|Ga0070673_100973519All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300005367|Ga0070667_101370784All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia663Open in IMG/M
3300005446|Ga0066686_11128765All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005450|Ga0066682_10852026All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300005454|Ga0066687_10593873All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium657Open in IMG/M
3300005467|Ga0070706_101307286All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia665Open in IMG/M
3300005540|Ga0066697_10301145All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium942Open in IMG/M
3300005555|Ga0066692_10360737All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales922Open in IMG/M
3300005558|Ga0066698_10331721All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1052Open in IMG/M
3300006028|Ga0070717_10830741All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300006031|Ga0066651_10030337All Organisms → cellular organisms → Bacteria2414Open in IMG/M
3300006032|Ga0066696_10786727All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300006034|Ga0066656_10753208All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300006046|Ga0066652_101919846All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300006163|Ga0070715_10111573All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300006796|Ga0066665_10725195All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales787Open in IMG/M
3300009088|Ga0099830_10175592All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1663Open in IMG/M
3300009137|Ga0066709_100776544All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1386Open in IMG/M
3300009137|Ga0066709_104178288All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300009551|Ga0105238_12564139All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium546Open in IMG/M
3300009553|Ga0105249_11178872All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium837Open in IMG/M
3300010041|Ga0126312_11144397All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300010046|Ga0126384_11980007All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia557Open in IMG/M
3300010159|Ga0099796_10224973All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia770Open in IMG/M
3300010321|Ga0134067_10502879All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300010336|Ga0134071_10078475All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales1542Open in IMG/M
3300010366|Ga0126379_13180121All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300010398|Ga0126383_13154688All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300012202|Ga0137363_10893276All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300012357|Ga0137384_11070468All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales647Open in IMG/M
3300012532|Ga0137373_10785537All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300012924|Ga0137413_11685567All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012944|Ga0137410_10915172All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales742Open in IMG/M
3300012960|Ga0164301_10793363All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium723Open in IMG/M
3300012972|Ga0134077_10459844All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300012976|Ga0134076_10046375All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales1630Open in IMG/M
3300012976|Ga0134076_10253356All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300012985|Ga0164308_11805381All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300012985|Ga0164308_12027310All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium536Open in IMG/M
3300012988|Ga0164306_10826147All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium748Open in IMG/M
3300013102|Ga0157371_10434768All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium963Open in IMG/M
3300013308|Ga0157375_10494357All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300014325|Ga0163163_12692388Not Available554Open in IMG/M
3300015356|Ga0134073_10054583All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales1081Open in IMG/M
3300015373|Ga0132257_101399551All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia890Open in IMG/M
3300016270|Ga0182036_11796519All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300017654|Ga0134069_1055070All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1256Open in IMG/M
3300017659|Ga0134083_10112407All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1081Open in IMG/M
3300018027|Ga0184605_10044514All Organisms → cellular organisms → Bacteria → Proteobacteria1874Open in IMG/M
3300018028|Ga0184608_10070470All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300018051|Ga0184620_10193960All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales672Open in IMG/M
3300018051|Ga0184620_10338732All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia510Open in IMG/M
3300018061|Ga0184619_10078124All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1467Open in IMG/M
3300018433|Ga0066667_10576286All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales936Open in IMG/M
3300018482|Ga0066669_11396895All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300019362|Ga0173479_10820435All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300019866|Ga0193756_1037159All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia685Open in IMG/M
3300019874|Ga0193744_1110898All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300019877|Ga0193722_1048774All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1075Open in IMG/M
3300019877|Ga0193722_1064733All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300019882|Ga0193713_1006860All Organisms → cellular organisms → Bacteria3540Open in IMG/M
3300019997|Ga0193711_1040069All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300019999|Ga0193718_1048683All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales925Open in IMG/M
3300020000|Ga0193692_1020294All Organisms → cellular organisms → Bacteria1590Open in IMG/M
3300020002|Ga0193730_1122451All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales711Open in IMG/M
3300020012|Ga0193732_1036086All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia852Open in IMG/M
3300020012|Ga0193732_1060548All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300020012|Ga0193732_1078841All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300020015|Ga0193734_1034002All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300020018|Ga0193721_1008083All Organisms → cellular organisms → Bacteria2756Open in IMG/M
3300021073|Ga0210378_10235421All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia695Open in IMG/M
3300021086|Ga0179596_10327228All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales767Open in IMG/M
3300021344|Ga0193719_10132125All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1082Open in IMG/M
3300021411|Ga0193709_1026753All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1395Open in IMG/M
3300021510|Ga0222621_1028411All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300022694|Ga0222623_10410555All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300022756|Ga0222622_10195122All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1339Open in IMG/M
3300022756|Ga0222622_10919826All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia641Open in IMG/M
3300024288|Ga0179589_10610952All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia511Open in IMG/M
3300025929|Ga0207664_11623175All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300025933|Ga0207706_11681090All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300025936|Ga0207670_11134364All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia661Open in IMG/M
3300026308|Ga0209265_1095198All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales802Open in IMG/M
3300026314|Ga0209268_1104675All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300026325|Ga0209152_10151879All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales878Open in IMG/M
3300026334|Ga0209377_1077779All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1414Open in IMG/M
3300026540|Ga0209376_1205895All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium889Open in IMG/M
3300026550|Ga0209474_10435483All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium670Open in IMG/M
3300026551|Ga0209648_10488856All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300026557|Ga0179587_10272942All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300026905|Ga0207516_1017858All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium579Open in IMG/M
3300027018|Ga0208475_1004905All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300027882|Ga0209590_10065552All Organisms → cellular organisms → Bacteria2073Open in IMG/M
3300028708|Ga0307295_10014617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1883Open in IMG/M
3300028720|Ga0307317_10169768All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales734Open in IMG/M
3300028778|Ga0307288_10373309All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300028796|Ga0307287_10184909All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales792Open in IMG/M
3300028807|Ga0307305_10532057Not Available525Open in IMG/M
3300028884|Ga0307308_10363309All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300030945|Ga0075373_11599303All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300031366|Ga0307506_10256714All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300031474|Ga0170818_106471440All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300031474|Ga0170818_113270858All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300031720|Ga0307469_10957286All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300032205|Ga0307472_101160848All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300033412|Ga0310810_10227459All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300034115|Ga0364945_0062169All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1057Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil24.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil19.33%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.24%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.72%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.20%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.36%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.68%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.68%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.84%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886007Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020000Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027018Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030945Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL2b_0206.000031902162886007Switchgrass RhizosphereGGKRFGGAPDPARDRNDAESGANEERSRTDASGPEAQKDRERNKDKKPVEGRFDFQKSGNFATCLS
JGI25406J46586_1019811613300003203Tabebuia Heterophylla RhizosphereSQAFPNAGGKGFSGASDPACNWDDANCGANEKRSRTNAPGPEAQKDGERDEDKKPVERRFKFQKSGNLATCLS*
Ga0062590_10305191213300004157SoilERFGGASDPARDRNDAESGANEEGSRTNASGPEAQKNRQRNEDKKPVEGRFEFQRFVNFATCLS*
Ga0066674_1043881523300005166SoilVSESGVEQSSQAFPDAGGERFSGAPDPARDRNDAESGANEERSRTDTPGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS*
Ga0066683_1052389323300005172SoilDPARDRNDAESGANEERSRTDACGPEAQKDRERNKDKKPVEGRFEFQKSGNFATCLS*
Ga0066684_1039718513300005179SoilGKRFGGAPDPPRDRNDAESGTNKKRSRTAASRPEAQQDRERNKDKQPVEGRFKFQKSANFATCLR*
Ga0066685_1116361513300005180SoilGVEQSSQAFPDAGGERFSGAPDPARDRNDAESGANEERSRTDTRGPEAQKHRERNEDEKPVEGRFEFQKSGNFATCLS*
Ga0066676_1093353723300005186SoilGAPDPARDRNDAESGANEERSRTDASGPEAQKDRERNKDKKPVEGRFDFQKSGNFATYLS
Ga0066675_1117760913300005187SoilEQSSQAFPDAGGERFSGAPDPARDRNDAESGANEKRRRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSWNFATCLS*
Ga0065705_1054935013300005294Switchgrass RhizosphereASDPARDRNDTDCGANKERSRTDAPGPKAQKDREQNEDKKPVEGRFKFQKSGNFATCTS*
Ga0066388_10296436613300005332Tropical Forest SoilSKGGIEQSSQAFPDARGQRFGSASDPTRNRNNPESGANEECSRTDASRPEAQKDRDRNEDKKPVERGFEFQKFENLATCLT*
Ga0066388_10786738113300005332Tropical Forest SoilSKGGIEQSSQAFPDARGQRFGSASDPTRNRNNPESGANEEGSRTDASGPEAQKDRDRNEDKKPVERGFEFQSLKFRDLLQLFNL*
Ga0070673_10097351923300005364Switchgrass RhizosphereISESGVEQSAQAFPDAGSERFGGAPYPTCDRNDAESGANKERSGTAASWPETQQDRERNEDKKPVERRFKFQMGENFATCLS*
Ga0070667_10137078423300005367Switchgrass RhizosphereERLSGATDPARDRNDAQSRTNEERSRADASGPEAQKNRDRNEDKKPVEGRFDFQKSGNFATWPG*
Ga0066686_1112876513300005446SoilGGERFSGAPDPARDRNDAESGANEKRRRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSWNFATCLS*
Ga0066682_1085202613300005450SoilGAPDPARDRNDAESGANEERSRTDTPGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0066687_1059387323300005454SoilGVEQSAQAFTDAGGERFGGASDPARNWNDSESGANEKRSRTDAARPEAQKDRERNKDKKPVEGRFKFQRSRNFATCLI*
Ga0070706_10130728613300005467Corn, Switchgrass And Miscanthus RhizosphereSAPDPARDRNDADSRADEERSRTDAAGPKAQKDRERHEDKKPVEGEFEFQKSGNFATCFR
Ga0066697_1030114523300005540SoilAFPDAGGKRFGGAPDPARDRNDPESGANEERSGTDASGPEAQKNRERNEDKKPVEGRFEFQKS*
Ga0066692_1036073713300005555SoilEQSSQAFPDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS*
Ga0066698_1033172113300005558SoilQAFPDAGGKRFGGAPDPARDRNDAESGANEERSGTDASGPEAQKNRERNEDKKPVEGRFEFQKSENFATCLS*
Ga0070717_1083074113300006028Corn, Switchgrass And Miscanthus RhizosphereQAFPDSGGKRFGSAPDPARHRNDTESGANEERSRTDAPGPEPQNDRERNKDKKPVEGRFKFQKSGNFATCTS*
Ga0066651_1003033713300006031SoilGGAPDPARDRDDAKSRGNEERSRTDASGPEAQQDSQRNEDQKPVEGRFEFQKSWNFATCFS*
Ga0066696_1078672713300006032SoilESGIEQSAQAFSDAEGKRFGGAPDPPRDRNDAESGTNKKRSRTAASRPEAQQDRERNKDKQPVEGRFKFQKSANFATCLR*
Ga0066656_1075320823300006034SoilQSSQAFPDAGGERFSGAPDPARDRNDAESGANEERSRTDTPGPEAQKNRERNEDKKPVEGRFEFQKSGNFATCLS*
Ga0066652_10191984623300006046SoilRFGGAPDPARDRNDAESGANEERSRTDTPGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS*
Ga0070715_1011157313300006163Corn, Switchgrass And Miscanthus RhizosphereDPARDRNDAESGANEEHSRTDAPGPEAQNDRERNKDKKPVERRFKFQKSGNFATCLS*
Ga0066665_1072519513300006796SoilQAFPDAGGERFSGAPDPARDRNDAESGANEKRRRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSWNFATCLS*
Ga0099830_1017559213300009088Vadose Zone SoilSSQALPDAGGERFGGTPDPARDRNDAESGANEERSRTDASGPEAQKDRERNKDKKPVEGRFDFQKSGNFATCLS*
Ga0066709_10077654423300009137Grasslands SoilPDAGGKRFGGAPDPARDRNDPESGANEERSGTDASGPEAQKNRERNEDKKPVEGRFEFQKS*
Ga0066709_10417828813300009137Grasslands SoilGVSESGVEQSSQAFPDAGGERFSGAPDPARDRNDAESGANEKRRRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSWNFATCLS*
Ga0105238_1256413913300009551Corn RhizosphereRFGGAPDPARDRNDAESGANEERSGTDASGPEAQKYRQRNKNKKPVEGRFEFQKFENFATCFS*
Ga0105249_1117887223300009553Switchgrass RhizosphereASDPARDWNDAESGTNEERSGTDAPGPEAQNNRQRNEDKKPVEGRFEFQKLENFATCLS*
Ga0126312_1114439713300010041Serpentine SoilQSSQAFADVSGKRFGSAPDPARDWNDAESGANEERSRTKTPGPEAQKDRYRNEDQKPIERRFEFQKSGNFATCLS*
Ga0126384_1198000713300010046Tropical Forest SoilTSQAFSDAGGERLGGAPDPARDRNNPERRANEERGRIDRSGPEPQKDRQRNEDKKPVEGGFEFQRSWTFAPRLS*
Ga0099796_1022497313300010159Vadose Zone SoilQSAQAFPYSGGKRFGSASDPARDRNDAESGANEERSRTDASGPEAQKDRERNKDKKPVEGRFDFQKSRNFATCLS*
Ga0134067_1050287923300010321Grasslands SoilQAFPDTGGECFGGASDPSRDWNDAESGANEERSRTDTPGPEAQKHRERNEDKKPVEGRFEFQKFGNFATCLS*
Ga0134071_1007847543300010336Grasslands SoilPDAGGERFSGAPDPARDRNDAESGANEKRRRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSWNFATCLS*
Ga0126379_1318012113300010366Tropical Forest SoilTPHRACERNDAEGGTNEKRSRTDAGGPKPQKNGQRNEDKEPVERRFEFQRSGNFATCLS*
Ga0126383_1315468823300010398Tropical Forest SoilFPDARGQRFGSASDPTRDRNNPESGANEKCSRTDASGPEAQKDRDGNEDKKPVERGFEFQKFENLATCLT*
Ga0137363_1089327613300012202Vadose Zone SoilGERFGGAPDPARDRNDAESGANEERSRTDASGPEAQKDRERNKDKKPVDGGFEFQRSANFATCFS*
Ga0137384_1107046823300012357Vadose Zone SoilERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS*
Ga0137373_1078553713300012532Vadose Zone SoilGVEQSSQAFPDAGGKRFGGAPDPARDRNNAESGANEQRSRTDASGPKAQKDCERNKDKKPVEGEFEFQRSGNFATCIS*
Ga0137413_1168556713300012924Vadose Zone SoilSQAFPSAGGERFGGASDPACDRNDTDSGANEERSRTDASGPEAQKDRERNEDKKPVEGRFEFQKSGNFAACFS*
Ga0137410_1091517223300012944Vadose Zone SoilPDTGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCRS*
Ga0164301_1079336313300012960SoilLPDAGGKRFGGAPDPARDRNDTESGANKERSRTDAPGPEAQKDREQNEDKKPVEGRFKFQTSGNFATCLS*
Ga0134077_1045984413300012972Grasslands SoilPDAGGERFSGAPDPARDRNDAESGANEERSRTDAPGPEAQNDRERNEDKKPVERRFEFQKSGNFATCLS*
Ga0134076_1004637513300012976Grasslands SoilSGAPDPARDRNDAESGANEKRRRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSWNFATCLS*
Ga0134076_1025335613300012976Grasslands SoilDAGGQPFGGAADPARDRNDAESGANEERSRTDACGPEAQKDRERNKNKKPVEGRFEFQKSGNFATCLS*
Ga0164308_1180538113300012985SoilSAQAFPDAGGEGFGGAPYPACDRNDAESGANKERSRTAASWPETQQNRERNEDKKPVERRFEFQMVENFATCVS*
Ga0164308_1202731023300012985SoilGGRRIINRERNDAESGANEERSGTDTSGPEAQKYRQRNKNKKPVEGRFEFQKSENFATCFS*
Ga0164306_1082614713300012988SoilDAGGECLGGAPDPARDRNDPERGTNKERSRTATSWPEAQQDREQNEDKKPVEGRFEFQRSENFATCLS*
Ga0157371_1043476813300013102Corn RhizosphereQTFPDSGRQRFRGTPDPACDRNDAESGANEQRSRTDTPGPEAQKDRERNEDKKPVERRFEFQKSQNFATCFG*
Ga0157375_1049435713300013308Miscanthus RhizosphereDAGSERFGGAPYPTCDRNDAESGANKERSGTAASWPETQQDRERNEDKKPVERRFKFQMGENFATCLS*
Ga0163163_1269238813300014325Switchgrass RhizospherePARDRNDSEGRANEERSRSDASGPEAQKDRGRNKDKKPVEREFEFQRSGNFATCLG*
Ga0134073_1005458313300015356Grasslands SoilPACDRNDTESGANEERSRTDASGPEAQKRRERNEDKKPVEGRFKFQKSWNFATCLS*
Ga0132257_10139955123300015373Arabidopsis RhizosphereGERFGGAADPARDWNDADGGANEERSRTNASRPESQKDREWNKDKKPVERGFEFQRSGNFATCLR*
Ga0182036_1179651913300016270SoilVSESGVEQSSRAFTDARGQCFGSASDPARNRNNSQSGANEQCSRTDAAGPKAQKNRQRNEDKKPVEGEFEFQKSGNFATCLS
Ga0134069_105507013300017654Grasslands SoilFGGASDPARNWNDSESGANEKRSRIDAARPEAQKDRERNKDKKPVEGRFKFQRSRNFATCLS
Ga0134083_1011240733300017659Grasslands SoilPDAGGERFSGAPDPARDRNDAESGANEKRRRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSWNFATCLS
Ga0184605_1004451433300018027Groundwater SedimentLPDAGGERFGGAPDPACDRNNTESGANEERSWTDASGPEAQKDRDRNKNEKPVEGRFDFQKSGNFASCIS
Ga0184608_1007047013300018028Groundwater SedimentEALSDAGGERFGGAPDPARDRNDAESGTNKERSRTAASGPEAQQDREQNEDKKPVEGWFDFQMSENFASCYG
Ga0184620_1019396013300018051Groundwater SedimentERFGGASDPARDRNDAESGTNEERSRADASGPEAQKDRDRHKDKKPVEGQFDFQKSGNFATCLS
Ga0184620_1033873213300018051Groundwater SedimentAFPDAGGERFGGAPDPARDWNDADSGANEKRSRTDAPGPKAQKDRERNKDKKPVEREFEFQRSGNFATCLS
Ga0184619_1007812413300018061Groundwater SedimentLPDAGGERFGGAPDPARDRNNTESGANEERSWTDASGPEAQKDRERNKDKKPVEGRFEFQKSGNFATCLS
Ga0066667_1057628623300018433Grasslands SoilEQSSQAFPDAGGERFSGAPDPARDRNDAESGANEKRRRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSWNFATCLS
Ga0066669_1139689523300018482Grasslands SoilFSDAGGECLGGAPDPTRHRNDPERGTNKERSRTATSWPEAQQDREQNEDKKPVEGWFDFQMSENFASCYG
Ga0173479_1082043523300019362SoilFTDAGGERFDGASDPARDWNDSESGANEKRSRTDAARPEAQKDRERNKDKKPVEGGCEFHGVVNPFVSMVEN
Ga0193756_103715913300019866SoilCGAPDPARDWNDADSGANEKRSRTDAPGPKAQKDRERNKDKKPVEREFEFQRSGNFATCL
Ga0193744_111089813300019874SoilVEQSSKAFPDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0193722_104877433300019877SoilEQSSKAFPDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0193722_106473323300019877SoilVSESSIEQSPQAVSHPGGERFGGAPDPARDRNDAESGANEERSGTDAPGPEAQKNRQRNEDKKPVERRFEFQKSKNFATCLS
Ga0193713_100686013300019882SoilPDAGGERFGGAPDPARDWNDADSGANEKRSRTDAPGPKAQKDRERNKDKKPVEREFEFQRSGNFATCLS
Ga0193711_104006913300019997SoilGGERCGGAPDPACDRNDTESGANEERSRTDASGPEPQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0193718_104868313300019999SoilPDSGGKRFGGASDPARDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0193692_102029443300020000SoilFPDAGGERFGGAPDPARDRNDAESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0193730_112245123300020002SoilGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCL
Ga0193732_103608623300020012SoilRFGGASDPARDRNDAQSGTNEERSRTDASGPEAQKDRDRNKNEKPVEGRFDFQKSGNFATCPS
Ga0193732_106054823300020012SoilSYASGKRFGGASDPARDWNDAESGTNEERSGADAPGPEAQNNRQRNEDKKPIERGSKFQKSRNFATCLS
Ga0193732_107884113300020012SoilGERFGGAPDPACDRNDAESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0193734_103400213300020015SoilGERFGGVANPARDGNDSESGANEERSRTDTSGPEAQKHRDWNENKKPVERRFEFQKSGNFATCLS
Ga0193721_100808313300020018SoilSESGVEQSSQAFPDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKDRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0210378_1023542113300021073Groundwater SedimentGGECFGGASDPARDWNDAESGTNEERSRTDASGPEAQKDRDRHKDKKPVEGWFDFQKSGNYATCPS
Ga0179596_1032722823300021086Vadose Zone SoilFPDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0193719_1013212533300021344SoilEQSAQALPDAGGQRFGGASDPARDRNDTESGANKERRRTDAPGPEAQKNRKRNEDKKPVEGRFEFQKSWNFATCLS
Ga0193709_102675343300021411SoilPDPACDRNDTESGANEERSRTDASGPEAQKHRDRNENKKPVEGRFEFQKSGNFATCLS
Ga0222621_102841133300021510Groundwater SedimentAYPDAGGERFGRAPDPARDRNDAESGANEERSRTDTAGPEAQKNRQQNEDKKPVKGRFEFQKSGNFAPCLS
Ga0222623_1041055513300022694Groundwater SedimentDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0222622_1019512213300022756Groundwater SedimentALPDSGGKRFGGASDPARDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVERRFEFQKFGNFATCLS
Ga0222622_1091982623300022756Groundwater SedimentESGIEQSSQAFPEAGGERFGGASDPARDRNDAQSGTNEERSRTDASGPEAQKDRDRNKNEKPVEGRFDFQKSGNFATCPS
Ga0179589_1061095223300024288Vadose Zone SoilQAFPDAAGERFGGAPDPARDRNDAESGANEERSRTDASGPEAQKDRERNKDKKPVEGRFDFQKSRNFATCLS
Ga0207664_1162317523300025929Agricultural SoilGISESGVEQSAQAFPDSGGKRFGSAPDPARDRNDAESGANEEHSRTDAPGPEAQNDRERNKDKKPVERRFKFQKSGNFATCLS
Ga0207706_1168109013300025933Corn RhizosphereFGGASDPARDRNDTDSGANEERSRTDASGPEAQKDREWNENKKPVEGRFEFQKSGNFATCLS
Ga0207670_1113436423300025936Switchgrass RhizosphereRGVSESGVEQCSQAFADAAGERFGGAPDPARDRNDSEGGANEERSRTDASGPEAQKDRGRNKDKKPVEREFEFQRSGNFATYIS
Ga0209265_109519813300026308SoilPDPARYRNDAESGANEERSRTDAPGPEAQNDRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0209268_110467533300026314SoilSSDAFADAGGERFSGAPDPARDRNDAESGANEESSRTDAPGPEAQKDRDRNEDKKPVEGRFKFQKSGNFATCLS
Ga0209152_1015187913300026325SoilSESSVEQPPHALPDTGGERFGRSSDPARDRNDAESGANEKRRRTDAAGPEAQNDRDWNENKKPIEGRFKFQKSGNFATCLS
Ga0209377_107777923300026334SoilRGVSESGVEQSSQAFPDAGGKRFGGAPDPARDRNDPESGANEERSGTDASGPEAQKNRERNEDKKPVEGRFEFQKS
Ga0209376_120589513300026540SoilECRIEQSAQAFPDAGGKRFGGAPDPARDRNDAESGANEERSGTDASGPEAQKNRERNEDKKPVEGRFEFQKSENFATCLS
Ga0209474_1043548313300026550SoilCRIEQSAQAFPDAGGKRFGGAPDPARDRNDAESGANEERSGTDASGPEAQKNRERNEDKKPVEGRFEFQKSENFATCLS
Ga0209648_1048885613300026551Grasslands SoilLGRVSESRVEQSSQAIPDAGGQRFGGAPDPARDRNDAESGANKEGSRTDASGPEPQNDRERNKDKKPVEGRFKFQKSENFATCLS
Ga0179587_1027294213300026557Vadose Zone SoilPDPARDRNDAESGANEERSRTDASGPEAQKDRERNKDKKPVERQFEFQRSGNFATCLS
Ga0207516_101785823300026905SoilQAFPEAGGERFGGASDPARDRNDAESGADEKRSRADASGPEAQKYRQRNKNKKPVEGRFEFQKFENFATCFS
Ga0208475_100490513300027018SoilPDAGGERFSGAPDPAGDRNDAESGANEERSRTDTPGPEAQKDRERNEDKKPVEGRFEFQKSGNFTTCLS
Ga0209590_1006555213300027882Vadose Zone SoilVSFPDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0307295_1001461723300028708SoilASGKRFGGASDPARDWNDAESGTNEERSGADAPGPEAQNNRQRNEDKKPIERGSKFQKSRNFATCLS
Ga0307317_1016976823300028720SoilGVEQSSHAYPDAGGERFGRAPDPARDRNDAESGANEERSRTDTAGPEAQKNRQQNEDKKPVKGRFEFQKSGNFAPCLS
Ga0307288_1037330913300028778SoilSGERFGRATDPARNRNDAQSGTNKERSRTATSWPEAQQDRERNKNEKPVERQFNFQKSANFATRLIESTGSS
Ga0307287_1018490913300028796SoilSQAFPDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0307305_1053205713300028807SoilFGGVANPARDGNDSESGANEERSRTDTSGPEAQKHRDWNEDKKPVERRFEFQKSGNFATCLS
Ga0307308_1036330923300028884SoilLPDAGGERFGGAPDPACDRNNTESGANEERSWTDASGPEAQKDRERNKDKKPVEGRFEFQKSGNFATCLS
Ga0075373_1159930323300030945SoilFGGAPDPARDRNDAESGANEERSRTDACGPEAQDDRERNEDKKPVEGRFKFQKSGNFATCIS
Ga0307506_1025671423300031366SoilLSHTIGERFGGAPDPARDRNDAESGANEERSGTDAPWPEAQKNRQRNEDKKPVEGWFEFQKSENFATCLS
Ga0170818_10647144023300031474Forest SoilALSHTSGERFGGAPDPARDRNDAESGANEERSGTDAPGPEAQKNRQRNKDKKPVEGRFEFQRFGNFATCLS
Ga0170818_11327085813300031474Forest SoilVSESGVEQCSQAFPDAGGERFGGAPDPACDRNDTESGANEERSRTDASGPEAQKHRERNEDKKPVEGRFEFQKSGNFATCLS
Ga0307469_1095728613300031720Hardwood Forest SoilSESGVEQSSQAFPDAGSERFGGAPDPARDRNDAESGANEERSGTDASGPKAQKNRQRNEDKKPVEGRFEFQKSENFATCLS
Ga0307472_10116084813300032205Hardwood Forest SoilFGGASDPTRDRNDTESGANKERSRTDAAGPEAQKDREQNKDKKPVEGRFKFQKSGNFATCLS
Ga0310810_1022745933300033412SoilCSQAFPDAGGERFGGAPYPASDRNDAESGANEERSGADASGPKAQKDRQRNEDKKPVKGQFEFQKSGNLATCLS
Ga0364945_0062169_2_2263300034115SedimentSAQAFPDSGSKRFGGASDPARDRNDTESGANKERSRTDAPRPEAQKDREQNENKKPVEGRFKFQKSGNFATCIS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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