Basic Information | |
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Family ID | F075362 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 119 |
Average Sequence Length | 123 residues |
Representative Sequence | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Number of Associated Samples | 104 |
Number of Associated Scaffolds | 119 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 16.24 % |
% of genes near scaffold ends (potentially truncated) | 31.93 % |
% of genes from short scaffolds (< 2000 bps) | 68.07 % |
Associated GOLD sequencing projects | 97 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (97.479 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (17.647 % of family members) |
Environment Ontology (ENVO) | Unclassified (29.412 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (49.580 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 7.20% β-sheet: 52.00% Coil/Unstructured: 40.80% | Feature Viewer |
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Pfam ID | Name | % Frequency in 119 Family Scaffolds |
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PF01757 | Acyl_transf_3 | 23.53 |
PF02230 | Abhydrolase_2 | 13.45 |
PF13180 | PDZ_2 | 6.72 |
PF04389 | Peptidase_M28 | 5.88 |
PF02225 | PA | 2.52 |
PF00296 | Bac_luciferase | 2.52 |
PF00881 | Nitroreductase | 1.68 |
PF00441 | Acyl-CoA_dh_1 | 1.68 |
PF00528 | BPD_transp_1 | 1.68 |
PF00106 | adh_short | 0.84 |
PF09084 | NMT1 | 0.84 |
PF13452 | MaoC_dehydrat_N | 0.84 |
PF13633 | Obsolete Pfam Family | 0.84 |
PF12412 | DUF3667 | 0.84 |
PF04679 | DNA_ligase_A_C | 0.84 |
COG ID | Name | Functional Category | % Frequency in 119 Family Scaffolds |
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COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 2.52 |
COG1960 | Acyl-CoA dehydrogenase related to the alkylation response protein AidB | Lipid transport and metabolism [I] | 1.68 |
COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 0.84 |
COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 0.84 |
COG4521 | ABC-type taurine transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 0.84 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 97.48 % |
Unclassified | root | N/A | 2.52 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2162886012|MBSR1b_contig_3824776 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1259 | Open in IMG/M |
3300000363|ICChiseqgaiiFebDRAFT_11238466 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1756 | Open in IMG/M |
3300000550|F24TB_11031501 | All Organisms → cellular organisms → Bacteria | 1099 | Open in IMG/M |
3300002886|JGI25612J43240_1063987 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 563 | Open in IMG/M |
3300004114|Ga0062593_100079569 | All Organisms → cellular organisms → Bacteria | 2212 | Open in IMG/M |
3300004479|Ga0062595_102356507 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 526 | Open in IMG/M |
3300005330|Ga0070690_100224643 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1317 | Open in IMG/M |
3300005336|Ga0070680_100000096 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 50255 | Open in IMG/M |
3300005406|Ga0070703_10224010 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 750 | Open in IMG/M |
3300005440|Ga0070705_101694562 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 534 | Open in IMG/M |
3300005444|Ga0070694_101441732 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 582 | Open in IMG/M |
3300005445|Ga0070708_100149777 | All Organisms → cellular organisms → Bacteria | 2169 | Open in IMG/M |
3300005445|Ga0070708_100264436 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1617 | Open in IMG/M |
3300005445|Ga0070708_100374508 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1342 | Open in IMG/M |
3300005467|Ga0070706_100148356 | All Organisms → cellular organisms → Bacteria | 2189 | Open in IMG/M |
3300005467|Ga0070706_100175956 | All Organisms → cellular organisms → Bacteria | 1998 | Open in IMG/M |
3300005468|Ga0070707_100169557 | All Organisms → cellular organisms → Bacteria | 2127 | Open in IMG/M |
3300005471|Ga0070698_100114059 | All Organisms → cellular organisms → Bacteria | 2667 | Open in IMG/M |
3300005518|Ga0070699_100046916 | All Organisms → cellular organisms → Bacteria | 3738 | Open in IMG/M |
3300005518|Ga0070699_100115917 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2354 | Open in IMG/M |
3300005542|Ga0070732_10469614 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 761 | Open in IMG/M |
3300005546|Ga0070696_100631053 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 867 | Open in IMG/M |
3300005586|Ga0066691_10096120 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1658 | Open in IMG/M |
3300005616|Ga0068852_100745567 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 991 | Open in IMG/M |
3300005764|Ga0066903_100652607 | All Organisms → cellular organisms → Bacteria | 1840 | Open in IMG/M |
3300005844|Ga0068862_100001824 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 19303 | Open in IMG/M |
3300005937|Ga0081455_10169705 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1663 | Open in IMG/M |
3300006041|Ga0075023_100060516 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1214 | Open in IMG/M |
3300006047|Ga0075024_100016171 | All Organisms → cellular organisms → Bacteria | 2997 | Open in IMG/M |
3300006163|Ga0070715_10773824 | Not Available | 580 | Open in IMG/M |
3300006173|Ga0070716_101166387 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 617 | Open in IMG/M |
3300006237|Ga0097621_101262249 | All Organisms → cellular organisms → Bacteria | 697 | Open in IMG/M |
3300006806|Ga0079220_10010839 | All Organisms → cellular organisms → Bacteria | 3531 | Open in IMG/M |
3300006806|Ga0079220_10645546 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 764 | Open in IMG/M |
3300006806|Ga0079220_11271891 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 614 | Open in IMG/M |
3300006845|Ga0075421_100233963 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2259 | Open in IMG/M |
3300006852|Ga0075433_10323723 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1364 | Open in IMG/M |
3300006854|Ga0075425_100366729 | All Organisms → cellular organisms → Bacteria | 1658 | Open in IMG/M |
3300006903|Ga0075426_10700403 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 759 | Open in IMG/M |
3300006904|Ga0075424_101296453 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 774 | Open in IMG/M |
3300006904|Ga0075424_102799193 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 508 | Open in IMG/M |
3300006914|Ga0075436_100106219 | All Organisms → cellular organisms → Bacteria | 1958 | Open in IMG/M |
3300007255|Ga0099791_10012066 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3632 | Open in IMG/M |
3300009143|Ga0099792_10192001 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1156 | Open in IMG/M |
3300009143|Ga0099792_10353845 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 887 | Open in IMG/M |
3300010401|Ga0134121_11629316 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 666 | Open in IMG/M |
3300011269|Ga0137392_10025426 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4223 | Open in IMG/M |
3300012199|Ga0137383_10250847 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1297 | Open in IMG/M |
3300012205|Ga0137362_10049720 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3412 | Open in IMG/M |
3300012205|Ga0137362_10085847 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2632 | Open in IMG/M |
3300012211|Ga0137377_10003239 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 12527 | Open in IMG/M |
3300012362|Ga0137361_10045140 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3603 | Open in IMG/M |
3300012363|Ga0137390_10618168 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1050 | Open in IMG/M |
3300012917|Ga0137395_10040418 | All Organisms → cellular organisms → Bacteria | 2880 | Open in IMG/M |
3300012917|Ga0137395_10160705 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1544 | Open in IMG/M |
3300012923|Ga0137359_10095455 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 2622 | Open in IMG/M |
3300012923|Ga0137359_10264174 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1535 | Open in IMG/M |
3300012957|Ga0164303_11256408 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 545 | Open in IMG/M |
3300015052|Ga0137411_1203523 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2132 | Open in IMG/M |
3300017936|Ga0187821_10452915 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 532 | Open in IMG/M |
3300017939|Ga0187775_10102206 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 964 | Open in IMG/M |
3300017993|Ga0187823_10175830 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 689 | Open in IMG/M |
3300018032|Ga0187788_10147920 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 883 | Open in IMG/M |
3300019877|Ga0193722_1054230 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1012 | Open in IMG/M |
3300019881|Ga0193707_1058727 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1213 | Open in IMG/M |
3300019888|Ga0193751_1090993 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1195 | Open in IMG/M |
3300020021|Ga0193726_1067880 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 1663 | Open in IMG/M |
3300020082|Ga0206353_10279697 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1875 | Open in IMG/M |
3300020199|Ga0179592_10125484 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1178 | Open in IMG/M |
3300021086|Ga0179596_10631083 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 543 | Open in IMG/M |
3300025885|Ga0207653_10042586 | All Organisms → cellular organisms → Bacteria | 1493 | Open in IMG/M |
3300025903|Ga0207680_10638474 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 762 | Open in IMG/M |
3300025904|Ga0207647_10078680 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1980 | Open in IMG/M |
3300025910|Ga0207684_10078472 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 2808 | Open in IMG/M |
3300025910|Ga0207684_10137037 | All Organisms → cellular organisms → Bacteria | 2102 | Open in IMG/M |
3300025910|Ga0207684_11610366 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 525 | Open in IMG/M |
3300025922|Ga0207646_10092336 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2709 | Open in IMG/M |
3300025922|Ga0207646_10183050 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1892 | Open in IMG/M |
3300025923|Ga0207681_10131794 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1849 | Open in IMG/M |
3300025936|Ga0207670_10071020 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2406 | Open in IMG/M |
3300025960|Ga0207651_10054666 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2737 | Open in IMG/M |
3300026088|Ga0207641_10047224 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3630 | Open in IMG/M |
3300026285|Ga0209438_1012296 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 2870 | Open in IMG/M |
3300026304|Ga0209240_1131026 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 835 | Open in IMG/M |
3300026340|Ga0257162_1016429 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 880 | Open in IMG/M |
3300026355|Ga0257149_1061904 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 545 | Open in IMG/M |
3300026360|Ga0257173_1058503 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 556 | Open in IMG/M |
3300026371|Ga0257179_1015238 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 849 | Open in IMG/M |
3300026374|Ga0257146_1004213 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 2388 | Open in IMG/M |
3300026446|Ga0257178_1014480 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 903 | Open in IMG/M |
3300026481|Ga0257155_1023481 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 894 | Open in IMG/M |
3300026496|Ga0257157_1024802 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 981 | Open in IMG/M |
3300026498|Ga0257156_1000210 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 9235 | Open in IMG/M |
3300026508|Ga0257161_1006655 | All Organisms → cellular organisms → Bacteria | 2019 | Open in IMG/M |
3300026514|Ga0257168_1000358 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4348 | Open in IMG/M |
3300027645|Ga0209117_1035966 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1523 | Open in IMG/M |
3300027765|Ga0209073_10522759 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 503 | Open in IMG/M |
3300027842|Ga0209580_10485223 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 615 | Open in IMG/M |
3300027910|Ga0209583_10627619 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 551 | Open in IMG/M |
3300028047|Ga0209526_10197617 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1394 | Open in IMG/M |
3300028587|Ga0247828_10127992 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1243 | Open in IMG/M |
3300028799|Ga0307284_10070645 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1264 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10020274 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1710 | Open in IMG/M |
3300031231|Ga0170824_128577386 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 504 | Open in IMG/M |
3300031740|Ga0307468_100555604 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 926 | Open in IMG/M |
3300031820|Ga0307473_10080470 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1668 | Open in IMG/M |
3300032174|Ga0307470_10072499 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1865 | Open in IMG/M |
3300032180|Ga0307471_100189603 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | 2041 | Open in IMG/M |
3300032205|Ga0307472_100127235 | All Organisms → cellular organisms → Bacteria | 1814 | Open in IMG/M |
3300032205|Ga0307472_100463270 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1081 | Open in IMG/M |
3300032770|Ga0335085_10003934 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 25084 | Open in IMG/M |
3300033432|Ga0326729_1003471 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3150 | Open in IMG/M |
3300033500|Ga0326730_1017172 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1532 | Open in IMG/M |
3300033501|Ga0326732_1001147 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 5879 | Open in IMG/M |
3300033502|Ga0326731_1043140 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1064 | Open in IMG/M |
3300033513|Ga0316628_101310020 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 965 | Open in IMG/M |
3300034817|Ga0373948_0148712 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 584 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 17.65% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 14.29% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 9.24% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 5.88% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 5.88% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.04% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 3.36% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 3.36% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.52% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.52% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.52% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 1.68% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.68% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.68% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.68% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.68% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 1.68% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.68% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.68% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.68% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.68% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.68% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.84% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.84% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.84% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.84% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.84% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.84% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 0.84% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.84% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.84% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.84% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.84% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2162886012 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000550 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly | Environmental | Open in IMG/M |
3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
3300002886 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
3300005542 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 | Environmental | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005586 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 | Environmental | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
3300006047 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 | Environmental | Open in IMG/M |
3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006914 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Host-Associated | Open in IMG/M |
3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300015052 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300017936 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1 | Environmental | Open in IMG/M |
3300017939 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG | Environmental | Open in IMG/M |
3300017993 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3 | Environmental | Open in IMG/M |
3300018032 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG | Environmental | Open in IMG/M |
3300019877 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1 | Environmental | Open in IMG/M |
3300019881 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2 | Environmental | Open in IMG/M |
3300019888 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2 | Environmental | Open in IMG/M |
3300020021 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1 | Environmental | Open in IMG/M |
3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020199 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026285 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes) | Environmental | Open in IMG/M |
3300026340 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A | Environmental | Open in IMG/M |
3300026355 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A | Environmental | Open in IMG/M |
3300026360 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B | Environmental | Open in IMG/M |
3300026371 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B | Environmental | Open in IMG/M |
3300026374 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A | Environmental | Open in IMG/M |
3300026446 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B | Environmental | Open in IMG/M |
3300026481 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A | Environmental | Open in IMG/M |
3300026496 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A | Environmental | Open in IMG/M |
3300026498 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A | Environmental | Open in IMG/M |
3300026508 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A | Environmental | Open in IMG/M |
3300026514 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B | Environmental | Open in IMG/M |
3300027645 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
3300027842 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
3300028799 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123 | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
3300033432 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction | Environmental | Open in IMG/M |
3300033500 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction | Environmental | Open in IMG/M |
3300033501 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction | Environmental | Open in IMG/M |
3300033502 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
MBSR1b_0732.00004080 | 2162886012 | Miscanthus Rhizosphere | MTSRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
ICChiseqgaiiFebDRAFT_112384663 | 3300000363 | Soil | GTLRAMTSRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
F24TB_110315012 | 3300000550 | Soil | MPRWTRALVLAAGLVCGLPPVAGAQNLAALRPEWVVEPVSSGRARVVGYLYNSNIMDGANVLLRVDRLGSDGAVTGTYRGRVVGDVLSGGRSLFDVPVAETGTYRVTVEAVDWVKECR* |
F14TB_1003613862 | 3300001431 | Soil | MPRWTRALVLAAGLVCGLPPVAGAQNLAGLRPEWVVEPVSSGRARVVGYLYNSNIMDGANVLLRVDRLGSDGAVTGTYRGRVVGDVLSGGRSLFDVPVAETGTYRVTVEAVDWVKECR* |
JGI25612J43240_10639871 | 3300002886 | Grasslands Soil | MSRWIRALVPVAGLAGLLVVSPXASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDTDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0062593_1000795693 | 3300004114 | Soil | MTSRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0062595_1023565071 | 3300004479 | Soil | MSRWIRALVPVAGLAGLLVMSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWVRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQV |
Ga0070690_1002246432 | 3300005330 | Switchgrass Rhizosphere | SRSYSTPPGKIRGTLRAMTSRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0070680_10000009652 | 3300005336 | Corn Rhizosphere | MTSRARSLALALPLLAALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0070703_102240101 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIHALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0070705_1016945621 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | LAATSRYTRGMSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADRAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0070694_1014417321 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | YTRAMSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSPFDVPVGEAGATYQLSVETVDWVKECR* |
Ga0070708_1001497772 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIHALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADGAVAGTYRGRLVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0070708_1002644362 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWMRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPDAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAAATYQVSVETVDWVKECR* |
Ga0070708_1003745081 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIRALVPTAGLIGLLAASAGAQGLVASSPHLRSEWSVEAPSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPV |
Ga0070706_1001483564 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWMRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNINDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVDEAAATYQVSVETVDWVKECR* |
Ga0070706_1001759561 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIHALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADRAVAGTYRVRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0070707_1001695573 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADRAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0070698_1001140592 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIRALVPTAGLIGLLAASAGAQGLVASSPHLRSEWSVEAPSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVEAVDWVNVCR* |
Ga0070699_1000469162 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIRALVPTAGLIGLLAASAGAQGLVASSPHLRSEWSVEAPSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEGGATYQVSVEAVDWVNVCR* |
Ga0070699_1001159172 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSRARSFALALPLLAALAAPAAAQEMTGAAGGYMRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0070732_104696142 | 3300005542 | Surface Soil | MPTSMRSLVLAAGFVAALVTGAGAQDLSGPSSPLLQPEWTVEPARGGGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWVKECR* |
Ga0070696_1006310532 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIRALVPVAGLAGLLAASPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0066691_100961202 | 3300005586 | Soil | MSRWMRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNINDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVDEAAAAYQVSVETVDWVKECR* |
Ga0068852_1007455671 | 3300005616 | Corn Rhizosphere | TSRSYSTPPGKIRGTLRAMTSRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0066903_1006526072 | 3300005764 | Tropical Forest Soil | MPIGKRALVLAAGLLCAMAAPANAQGLRPEWTVEPASGGRARVVGYLYNGDIRDAANVSLRVDRIAADGAVTATYSRRVVGDVLSGGRSLFDVPVGEPGANYRVVVETFDWVKECR* |
Ga0068862_10000182417 | 3300005844 | Switchgrass Rhizosphere | MTSRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRSIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0081455_101697052 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MNVRTKRKAAGGVMLMSLASVVGAQGLAGLRPEWTVEAAAGGRARVVGYLYNSNIQDGANVLLRVDRIGSDGAVIGTYRRRVVGDVLSGGRSLFDVPVAETGTYRVTVETVDWVKECR* |
Ga0075023_1000605162 | 3300006041 | Watersheds | LGAMSPWIRALVPTAGLIGLLAVSPGAGAEGPVASSPQLRSEWSVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRALFDVPVGEAGAAYQVSVEAVDWVKECR* |
Ga0075024_1000161712 | 3300006047 | Watersheds | MSPWIRALVPTAGLIGLLAVSPGAGAEGPVASSPQLRSEWSVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRALFDVPVGEAGAAYQVSVEAVDWVKECR* |
Ga0070715_107738241 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWMRALVPTAGLIGLLAASLGASAQGLVASSPHLRSEWSVEAPSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVRSGGRSFFDVPVGEAAATYQVSVEVV |
Ga0070716_1011663872 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWLRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0097621_1012622492 | 3300006237 | Miscanthus Rhizosphere | MSRWIRALVPAAGLIGLLAATPGADAQGLVASSPHLRSEWSVEAPAAGGAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0079220_100108391 | 3300006806 | Agricultural Soil | LTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0079220_106455461 | 3300006806 | Agricultural Soil | PAAAQEPTGLGAGYLRSDWAVEAAPGGRAHVVGYLYNRNIQDAANVWLRVDRLRPDGTVADSYRRRLVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0079220_112718911 | 3300006806 | Agricultural Soil | MPRSMRSLVLVAGLAGTLVTGAGAQDLSGPSSPLLQPEWTVEPARGGGTHVVGYLYNRSIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWVKECR* |
Ga0075421_1002339632 | 3300006845 | Populus Rhizosphere | MTSRARSFALALPLLAALAAPAAAQEMTGAAGGYMRSEWAVEPAPGGRAHVVGYLYNRSIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0075433_103237232 | 3300006852 | Populus Rhizosphere | MSRWLRALVPAAGLVGLLATSAHAQGVVATRADLRSEWSVETPTRGRAQVVGYLYNTRIQDAANVWLRVDRLGADGTVAGSYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSVDSVEWVKECR* |
Ga0075425_1003667292 | 3300006854 | Populus Rhizosphere | MSRWLRALVPAAGLVGLLATSAHAQGVVATRADLRSEWSVETPTRGRAHVVGYLYNTRIQDAANVWLRVDRLGADGTVVGSYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSVDSVEWVKECR* |
Ga0075426_107004032 | 3300006903 | Populus Rhizosphere | MSRWLRALVPAAGLVGLLATSAHAQGVVATRADLRSEWSVETPTRGRAHVVGYLYNTRIQDAANVWLRVDRLGADGTVVGSYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSV |
Ga0075424_1012964532 | 3300006904 | Populus Rhizosphere | MTSRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDHVAPDGTVADSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR* |
Ga0075424_1027991931 | 3300006904 | Populus Rhizosphere | MSRWLRALVPAAGLVGLLATSAHAQGVVATRADLRSEWSVETPTRGRAHVVGYLYNTRIQDAANVWLRVDRLGADGTVVGSYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSVGSVEWVKECR* |
Ga0075436_1001062192 | 3300006914 | Populus Rhizosphere | MSRWLRALVPAAGLVGLLATSAHAQGVVATRADLRSEWSVETPTRGRAHVVGYLYNTRIQDAANVWLRVDRLGADGTVAGSYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSVDSVEWVKECR* |
Ga0099791_100120662 | 3300007255 | Vadose Zone Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDTDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0099792_101920012 | 3300009143 | Vadose Zone Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0099792_103538452 | 3300009143 | Vadose Zone Soil | MRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGE |
Ga0134121_116293162 | 3300010401 | Terrestrial Soil | MSRWIRALVPVAGLAGLLVVSPSAGAQGLVASSPYFRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0137392_100254263 | 3300011269 | Vadose Zone Soil | MRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0137383_102508473 | 3300012199 | Vadose Zone Soil | MRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNINDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVDEAAATYQVSVETVDWVKECR* |
Ga0137362_100497201 | 3300012205 | Vadose Zone Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGGDGAVASTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0137362_100858473 | 3300012205 | Vadose Zone Soil | MRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPDAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAAATYQVSVETVDWVKECR* |
Ga0137377_100032392 | 3300012211 | Vadose Zone Soil | MRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAAATYQVSVETVDWVKECR* |
Ga0137361_100451402 | 3300012362 | Vadose Zone Soil | MSRWIRALVPVAGLAGLLVVSPSAGAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0137390_106181682 | 3300012363 | Vadose Zone Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0137395_100404182 | 3300012917 | Vadose Zone Soil | MSRWIHALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0137395_101607052 | 3300012917 | Vadose Zone Soil | MRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAPGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0137359_100954553 | 3300012923 | Vadose Zone Soil | MSRWIRTLVPVAGLAGLLVVSPSAGAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR* |
Ga0137359_102641743 | 3300012923 | Vadose Zone Soil | MRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPDAGRAHVVGYLYNSNIKDAANVWLRVDRLGADSAVAGTYRRRVVGDVLSGGRSLFDVPVGEAAATYQVSVETVDWVKECR* |
Ga0164303_112564081 | 3300012957 | Soil | MSRWIRALVPVAGLAGLLVVNPSAGAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVET |
Ga0137411_12035231 | 3300015052 | Vadose Zone Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDTDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVD |
Ga0187821_104529152 | 3300017936 | Freshwater Sediment | MPTSMRSLVLAAGFAGALVTGAGAQDLSGPSSPLLQPEWTVEPARGGGTHVVGYLYNRSIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWV |
Ga0187775_101022062 | 3300017939 | Tropical Peatland | MPTSTRSLILAASLVTTLAGAAAAQELRPEWSVEPASGGRAHVVGYLYNGNIRDAANVQLRVDRLGGGGAVTASYRGRVVGDVLSGGRSLFDVPVGEAGASYRVEVVNVDWVKECR |
Ga0187823_101758302 | 3300017993 | Freshwater Sediment | MPTSMRSLVLAAGFAGVLVTGAGAQDLSGPSSPLLQPEWTVEPARGGGTHVVGYLYNRSIKDAANVWLRVDRLGADGAVAATYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWVKECR |
Ga0187788_101479201 | 3300018032 | Tropical Peatland | QQQREQEGDRRGMEATARHAGTLLHAARPGYTSAMPTSTRSLILAASLVTTLAGAAAAQELRPEWSVEPASGGRAHVVGYLYNGNIRDAANVQLRVDRLGGGGAVTASYRGRVVGDVLSGGRSLFDVPVGEAGASYRVEVVNVDWVKECR |
Ga0193722_10542302 | 3300019877 | Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGTDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0193707_10587272 | 3300019881 | Soil | MSRWIRALVPVAGLAGLLAASPSASAQGLVASSPYLRSEWSVETPAAGRAHLVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0193751_10909932 | 3300019888 | Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0193726_10678802 | 3300020021 | Soil | RWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEAPAAGRAHLVGYLYNSSIKDAANVWVRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0206353_102796972 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | MTSRARSLALALPLLAALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
Ga0179592_101254842 | 3300020199 | Vadose Zone Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDTDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0179596_106310831 | 3300021086 | Vadose Zone Soil | MSRWMRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0207653_100425862 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIHALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEGGATYQVSVEAVDWVNVCR |
Ga0207680_106384741 | 3300025903 | Switchgrass Rhizosphere | ALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
Ga0207647_100786803 | 3300025904 | Corn Rhizosphere | GKIRGTLRAMTSRARSLALALPLLAALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
Ga0207684_100784722 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIRALVPTAGLIGLLAASAGAQGLVASSPHLRSEWSVEAPSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEGGATYQVSVEAVDWVNVCR |
Ga0207684_101370372 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWIHALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADRAVAGTYRVRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0207684_116103661 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | EGGAGAAARHPRTLPLPARSRYTLAMSRWMRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNINDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVDEAAATYQVSVETVDWVKECR |
Ga0207646_100923362 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRWMRALVPAVGLIGLLVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNINDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVDEAAATYQVSVETVDWVKECR |
Ga0207646_101830501 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | GAAARHPRTLPLAATSRYTRGMSRWIHALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADRAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0207681_101317942 | 3300025923 | Switchgrass Rhizosphere | MTAMHDRSGARKAFKARRGFLAKLAVTALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
Ga0207670_100710201 | 3300025936 | Switchgrass Rhizosphere | SRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
Ga0207651_100546664 | 3300025960 | Switchgrass Rhizosphere | MTSRARSLALALPLLAALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRNIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGCRSLFDVPVGEPTATYRVSVETLDWVKECR |
Ga0207641_100472241 | 3300026088 | Switchgrass Rhizosphere | MTSRARSFALALPLLAALAAPAAAQEMTGAAGGYMRSEWAVEPAPGGRAHVVGYLYNRSIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
Ga0209438_10122962 | 3300026285 | Grasslands Soil | MSRWIRALVPVAGLAGLLVVSPGASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDTDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0209240_11310262 | 3300026304 | Grasslands Soil | MSRWMRALVPAVGLIGLVVASASAQGLVASSPHLRSEWSVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKEC |
Ga0257162_10164292 | 3300026340 | Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257149_10619041 | 3300026355 | Soil | AAARHPRTLPLAATSRYTRGMSRWIRALVPVAGLAGLLVVSPGASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257173_10585031 | 3300026360 | Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQ |
Ga0257179_10152381 | 3300026371 | Soil | VAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257146_10042132 | 3300026374 | Soil | MSRSIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257178_10144802 | 3300026446 | Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257155_10234812 | 3300026481 | Soil | PLAATSRYTRGMSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257157_10248022 | 3300026496 | Soil | ASAQGLVASSPYLRSEWGVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257156_10002108 | 3300026498 | Soil | MSRWIRALVPVAGLAGLLVVSPGASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257161_10066552 | 3300026508 | Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVETPAAGRAHLVGYLYNSNIKDAANVWLRVDRLGSDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0257168_10003581 | 3300026514 | Soil | MSRWIRTLVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLDTDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVET |
Ga0209117_10359662 | 3300027645 | Forest Soil | LAATSRYTRGMSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVETPAAGRAHLVGYLYNSNIKDAANVWLRVDRLGSDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0209073_105227591 | 3300027765 | Agricultural Soil | GTLVTGAGAQDLSGPSSPLLQPEWTVEPARGGGTHVVGYLYNRSIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWVKECR |
Ga0209580_104852231 | 3300027842 | Surface Soil | LAAGFVAALVTGAGAQDLSGPSSPLLQPEWTVEPARGEGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWVKECR |
Ga0209583_106276192 | 3300027910 | Watersheds | LYPSRQGHGTLGAMSPWIRALVPTAGLIGLLAVSPGAGAEGPVASSPQLRSEWSVEAPAAGRAHVVGYLYNSNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRALFDVPVGEAGAAYQVSVEAVDWVKECR |
Ga0209526_101976172 | 3300028047 | Forest Soil | MSRWLRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0247828_101279922 | 3300028587 | Soil | SWAAPAAAQEMTGAAGGYMRSEWAVEPAPGGRAHVVGYLYNRSIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
Ga0307284_100706452 | 3300028799 | Soil | MSRWIRALVPVAGLAGLLVMSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWVRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
(restricted) Ga0255310_100202742 | 3300031197 | Sandy Soil | MPTSMRSLVLAAGFVGALATGAGTQDLSGPSSPLLQPEWTVEPARGGGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWVKECR |
Ga0170824_1285773862 | 3300031231 | Forest Soil | ATSRYTRAMSGWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGGDGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVLVETVDWVKECR |
Ga0307469_106210982 | 3300031720 | Hardwood Forest Soil | MSRWTRALVLAAGLVCGLPPVAGAQDLAGLRPEWVVEPVSGGSARVVGYLYNSNMKDGANVLLRVDRLGSDGAVTGTYRRRVVGDVLSGGRSLFDVPVAETGTYRVTVEVVDWVKECR |
Ga0307468_1005556042 | 3300031740 | Hardwood Forest Soil | MSRWIRALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADRAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0307473_100804702 | 3300031820 | Hardwood Forest Soil | MSRWIRALVPTAGLIGLLAASAGASAQGLVASSPHLRSEWSVEAPSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVEAVDWVNVCR |
Ga0307470_100724993 | 3300032174 | Hardwood Forest Soil | LAASPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRVQDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0307471_1001896032 | 3300032180 | Hardwood Forest Soil | MSRWLRILVPAAGLIGLLAASAHAQGVGVTRADLRSEWSVETPARGRAHVVGYLYNTRIQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSVDSVEWVKECR |
Ga0307472_1001272352 | 3300032205 | Hardwood Forest Soil | MSRWIHALVPVAGLAGLLVVSPSASAQGLVASSPYLRSEWSVEARSAGRAHVVGYLYNSRIQDAANVWLRVDRLGADGAVAGTYRGRVVGDVLSGGRSLFDVPVGEAGATYQVSVETVDWVKECR |
Ga0307472_1004632702 | 3300032205 | Hardwood Forest Soil | MSRWLRILVPAAGLIGLLAASAHAQGVGVTRADLRSEWSVETPARGRAHVVGYLYNTRIQDAANVWLRVDRLGADGSVAGTYRGRVVGDVLSGGRLFFDVPVGEAGASYQVSVDSVEWVKECR |
Ga0335085_1000393430 | 3300032770 | Soil | MSTSTRALVLAAGLVCAMAAGGGAQDLAASGSSLRPEWSVEPAAGGHARVVGYLYNSNIRDAANVSLRVDRVGSDGSVTATYRRRVVGDVLSGGRSLFDVPVGESGATYRVSVEAVDWVKECR |
Ga0326729_10034712 | 3300033432 | Peat Soil | MPTSTRALVLAAGFVCALVAGAGAQDLSGPSSPLLQPDWTVEPARGGGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYRVAVETVDWVKECR |
Ga0326730_10171721 | 3300033500 | Peat Soil | MPTSTRALVLAAGLVCALVAGAGAQDLSGPSSPLLQPDWTVEPARGGGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYRVAVETVDWVKECR |
Ga0326732_10011471 | 3300033501 | Peat Soil | PMPTSTRALVLAAGFVCALVAGAGAQDLSGPSSPLLQPDWTVEPARGGGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYRVAVETVDWVKECR |
Ga0326731_10431402 | 3300033502 | Peat Soil | MPTSTRALVLAAGFVCALVAGAGAQDLSGPLSPLLQPDWTVEPARGGGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGGRSLFDVPVGEAGATYRVAVETVDWVKECR |
Ga0316628_1013100201 | 3300033513 | Soil | MPTSMRSLVLAAGFAGALVTGAGAQDLSGSSSPLLQPEWTVEPARGGGAHVVGYLYNRNIKDAANVWLRVDRLGADGAVAGTYRRRVVGDVLSGNRSLFDVPVGEGGATYRVAVETVDWVKECR |
Ga0373948_0148712_145_519 | 3300034817 | Rhizosphere Soil | MTSRARSLALALPLLTALAAPAAAQEMTGPAGGYLRSEWAVEPAPGGRAHVVGYLYNRSIKDAANVWLRVDRVAPDGTVAGSYRRRVVGDVLSGGRSLFDVPVGEPTATYRVSVETLDWVKECR |
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