Metagenome / Metatranscriptome Family F075315

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075315
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	42 residues
Representative Sequence	MYYETQVVFTEEIDTKNGVKEKKVRRNYLVECDSVSVAEAKV
Number of Associated Samples	107
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	96.64 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Archaea (43.697 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (33.613 % of family members)
Environment Ontology (ENVO)	Unclassified (85.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.034 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 40.00% Coil/Unstructured: 60.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00565	SNase	15.13
PF00004	AAA	9.24
PF01223	Endonuclease_NS	5.88
PF13177	DNA_pol3_delta2	5.88
PF03851	UvdE	5.88
PF00535	Glycos_transf_2	5.04
PF02229	PC4	4.20
PF03013	Pyr_excise	4.20
PF04055	Radical_SAM	2.52
PF01513	NAD_kinase	0.84
PF00709	Adenylsucc_synt	0.84
PF01327	Pep_deformylase	0.84
PF08406	CbbQ_C	0.84
PF00574	CLP_protease	0.84
PF01202	SKI	0.84
PF01467	CTP_transf_like	0.84
PF03819	MazG	0.84
PF01501	Glyco_transf_8	0.84
PF13578	Methyltransf_24	0.84
PF02562	PhoH	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	5.88
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	5.88
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.84
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.84
COG0714	MoxR-like ATPase	General function prediction only [R]	0.84
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG1442	Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.84
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.84
COG5597	N-acetylglucosaminyl transferase	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.47 %
Unclassified	root	N/A	23.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.62 %
Unclassified	root	N/A	23.53 %
Viruses	superkingdom	All Organisms → Viruses	21.85 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	43.70 %
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.01 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.01 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	10.08 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.88 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.52 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.01 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.08 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	5.88 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	2.52 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.01 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.08 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.52 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.84 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.84 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.01 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.08 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	5.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.52 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.84 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.84 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.01 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.08 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	5.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.52 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	0.84 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.84 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.01 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.08 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	5.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.52 %
Pelagibacteraceae bacterium TMED287	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	0.84 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.84 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.01 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.08 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	5.88 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2.52 %
Pelagibacteraceae bacterium TMED287	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	0.84 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.84 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2222084006\|2223486107	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	589	Open in IMG/M
3300000115\|DelMOSum2011_c10070371	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1264	Open in IMG/M
3300000117\|DelMOWin2010_c10180903	Not Available	665	Open in IMG/M
3300000158\|SI54feb11_100mDRAFT_c1047260	Not Available	598	Open in IMG/M
3300001354\|JGI20155J14468_10054452	All Organisms → Viruses → Predicted Viral	1665	Open in IMG/M
3300001960\|GOS2230_1048067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	666	Open in IMG/M
3300005603\|Ga0066853_10257884	All Organisms → cellular organisms → Archaea	574	Open in IMG/M
3300006025\|Ga0075474_10183127	Not Available	647	Open in IMG/M
3300006166\|Ga0066836_10542734	All Organisms → cellular organisms → Archaea	704	Open in IMG/M
3300006749\|Ga0098042_1102268	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300006751\|Ga0098040_1035564	All Organisms → Viruses → Predicted Viral	1581	Open in IMG/M
3300006751\|Ga0098040_1212362	Not Available	564	Open in IMG/M
3300006752\|Ga0098048_1234917	All Organisms → cellular organisms → Archaea	537	Open in IMG/M
3300006789\|Ga0098054_1234381	Not Available	664	Open in IMG/M
3300006789\|Ga0098054_1255459	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300006810\|Ga0070754_10116361	All Organisms → Viruses → Predicted Viral	1306	Open in IMG/M
3300006870\|Ga0075479_10184365	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	842	Open in IMG/M
3300006929\|Ga0098036_1130494	All Organisms → cellular organisms → Archaea	769	Open in IMG/M
3300006990\|Ga0098046_1139988	Not Available	521	Open in IMG/M
3300007234\|Ga0075460_10260111	Not Available	577	Open in IMG/M
3300007647\|Ga0102855_1077541	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	894	Open in IMG/M
3300009103\|Ga0117901_1312730	All Organisms → cellular organisms → Archaea	708	Open in IMG/M
3300009409\|Ga0114993_10396963	All Organisms → Viruses → Predicted Viral	1037	Open in IMG/M
3300009425\|Ga0114997_10361677	All Organisms → cellular organisms → Archaea	791	Open in IMG/M
3300009472\|Ga0115554_1110830	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1159	Open in IMG/M
3300009476\|Ga0115555_1417823	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	533	Open in IMG/M
3300009703\|Ga0114933_10140724	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1668	Open in IMG/M
3300009705\|Ga0115000_10732527	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	609	Open in IMG/M
3300009706\|Ga0115002_10706144	All Organisms → cellular organisms → Archaea	712	Open in IMG/M
3300009785\|Ga0115001_10364046	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	908	Open in IMG/M
3300009786\|Ga0114999_11342461	All Organisms → cellular organisms → Archaea	505	Open in IMG/M
3300009790\|Ga0115012_10107982	All Organisms → Viruses → Predicted Viral	1958	Open in IMG/M
3300010150\|Ga0098056_1287346	Not Available	543	Open in IMG/M
3300010155\|Ga0098047_10240592	All Organisms → cellular organisms → Archaea	689	Open in IMG/M
3300011252\|Ga0151674_1100732	All Organisms → cellular organisms → Archaea	774	Open in IMG/M
3300012523\|Ga0129350_1005432	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	902	Open in IMG/M
3300012920\|Ga0160423_10080883	All Organisms → Viruses → Predicted Viral	2312	Open in IMG/M
3300012954\|Ga0163111_11367358	All Organisms → cellular organisms → Archaea	697	Open in IMG/M
3300017706\|Ga0181377_1050197	All Organisms → cellular organisms → Archaea	801	Open in IMG/M
3300017720\|Ga0181383_1039702	All Organisms → Viruses → Predicted Viral	1266	Open in IMG/M
3300017725\|Ga0181398_1008281	All Organisms → Viruses → Predicted Viral	2681	Open in IMG/M
3300017727\|Ga0181401_1061482	All Organisms → Viruses → Predicted Viral	1006	Open in IMG/M
3300017731\|Ga0181416_1076059	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300017733\|Ga0181426_1121602	Not Available	526	Open in IMG/M
3300017739\|Ga0181433_1085466	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300017744\|Ga0181397_1009423	All Organisms → Viruses → Predicted Viral	3035	Open in IMG/M
3300017749\|Ga0181392_1239626	All Organisms → cellular organisms → Archaea	512	Open in IMG/M
3300017762\|Ga0181422_1079158	All Organisms → Viruses → Predicted Viral	1038	Open in IMG/M
3300017772\|Ga0181430_1246158	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	505	Open in IMG/M
3300018049\|Ga0181572_10850110	Not Available	542	Open in IMG/M
3300018421\|Ga0181592_10261914	All Organisms → Viruses → Predicted Viral	1265	Open in IMG/M
3300018421\|Ga0181592_10525408	Not Available	814	Open in IMG/M
3300018424\|Ga0181591_10727643	Not Available	696	Open in IMG/M
3300018424\|Ga0181591_11027874	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	558	Open in IMG/M
3300019751\|Ga0194029_1004062	All Organisms → Viruses → Predicted Viral	1934	Open in IMG/M
3300019765\|Ga0194024_1029708	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300020304\|Ga0211684_1032151	All Organisms → cellular organisms → Archaea	725	Open in IMG/M
3300020311\|Ga0211628_1064190	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300020378\|Ga0211527_10217031	Not Available	530	Open in IMG/M
3300020388\|Ga0211678_10156900	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	973	Open in IMG/M
3300020401\|Ga0211617_10484419	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300020402\|Ga0211499_10058343	All Organisms → cellular organisms → Archaea	1487	Open in IMG/M
3300020403\|Ga0211532_10288445	Not Available	634	Open in IMG/M
3300020411\|Ga0211587_10143309	All Organisms → cellular organisms → Archaea	1017	Open in IMG/M
3300020411\|Ga0211587_10243511	All Organisms → cellular organisms → Archaea	745	Open in IMG/M
3300020416\|Ga0211644_10093861	All Organisms → Viruses → Predicted Viral	1216	Open in IMG/M
3300020417\|Ga0211528_10194522	All Organisms → cellular organisms → Archaea	781	Open in IMG/M
3300020437\|Ga0211539_10397644	All Organisms → cellular organisms → Archaea	574	Open in IMG/M
3300020448\|Ga0211638_10101529	All Organisms → Viruses → Predicted Viral	1284	Open in IMG/M
3300020449\|Ga0211642_10526382	Not Available	506	Open in IMG/M
3300020470\|Ga0211543_10157826	All Organisms → Viruses → Predicted Viral	1136	Open in IMG/M
3300020470\|Ga0211543_10240268	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	889	Open in IMG/M
3300020470\|Ga0211543_10533973	Not Available	555	Open in IMG/M
3300020478\|Ga0211503_10037858	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	3076	Open in IMG/M
3300020478\|Ga0211503_10323080	All Organisms → cellular organisms → Archaea	840	Open in IMG/M
3300021957\|Ga0222717_10188162	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1233	Open in IMG/M
3300022053\|Ga0212030_1044852	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	625	Open in IMG/M
(restricted) 3300022888\|Ga0233428_1032821	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2318	Open in IMG/M
3300023116\|Ga0255751_10212964	All Organisms → Viruses → Predicted Viral	1071	Open in IMG/M
(restricted) 3300024258\|Ga0233440_1016040	All Organisms → cellular organisms → Archaea	3594	Open in IMG/M
(restricted) 3300024258\|Ga0233440_1019123	All Organisms → cellular organisms → Archaea	3129	Open in IMG/M
(restricted) 3300024302\|Ga0233449_1026040	All Organisms → cellular organisms → Archaea	2604	Open in IMG/M
(restricted) 3300024324\|Ga0233443_1276258	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	563	Open in IMG/M
(restricted) 3300024336\|Ga0233447_1113485	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	776	Open in IMG/M
3300024344\|Ga0209992_10013453	All Organisms → Viruses → Predicted Viral	4827	Open in IMG/M
3300025084\|Ga0208298_1088450	Not Available	570	Open in IMG/M
3300025102\|Ga0208666_1008486	All Organisms → Viruses → Predicted Viral	3636	Open in IMG/M
3300025103\|Ga0208013_1045816	All Organisms → Viruses	1201	Open in IMG/M
3300025108\|Ga0208793_1171690	Not Available	560	Open in IMG/M
3300025118\|Ga0208790_1094585	Not Available	876	Open in IMG/M
3300025127\|Ga0209348_1096828	Not Available	922	Open in IMG/M
3300025127\|Ga0209348_1155024	All Organisms → cellular organisms → Archaea	670	Open in IMG/M
3300025127\|Ga0209348_1171888	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300025128\|Ga0208919_1215094	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
3300025132\|Ga0209232_1179842	Not Available	657	Open in IMG/M
3300025137\|Ga0209336_10134327	All Organisms → cellular organisms → Archaea	666	Open in IMG/M
3300025610\|Ga0208149_1080548	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	802	Open in IMG/M
3300025645\|Ga0208643_1026772	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1946	Open in IMG/M
3300025727\|Ga0209047_1099419	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	990	Open in IMG/M
3300025803\|Ga0208425_1018398	All Organisms → Viruses → Predicted Viral	1871	Open in IMG/M
3300025803\|Ga0208425_1108663	Not Available	642	Open in IMG/M
3300025806\|Ga0208545_1079908	Not Available	894	Open in IMG/M
3300026257\|Ga0208407_1196040	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	594	Open in IMG/M
3300026321\|Ga0208764_10252470	Not Available	860	Open in IMG/M
3300027687\|Ga0209710_1145558	All Organisms → cellular organisms → Archaea	867	Open in IMG/M
3300027838\|Ga0209089_10118402	All Organisms → Viruses → Predicted Viral	1618	Open in IMG/M
3300027839\|Ga0209403_10458927	All Organisms → cellular organisms → Archaea	654	Open in IMG/M
3300027844\|Ga0209501_10377902	All Organisms → cellular organisms → Archaea	846	Open in IMG/M
3300027906\|Ga0209404_10126548	Not Available	1535	Open in IMG/M
3300028436\|Ga0256397_1000208	All Organisms → cellular organisms → Archaea	4298	Open in IMG/M
3300029319\|Ga0183748_1042621	All Organisms → Viruses → Predicted Viral	1350	Open in IMG/M
3300031510\|Ga0308010_1267859	All Organisms → cellular organisms → Archaea	595	Open in IMG/M
3300031588\|Ga0302137_1219772	All Organisms → cellular organisms → Archaea	650	Open in IMG/M
3300031675\|Ga0302122_10071392	All Organisms → Viruses → Predicted Viral	1515	Open in IMG/M
3300031702\|Ga0307998_1076207	All Organisms → cellular organisms → Archaea	1278	Open in IMG/M
3300031886\|Ga0315318_10294601	Not Available	930	Open in IMG/M
3300032032\|Ga0315327_10210341	Not Available	1220	Open in IMG/M
3300032047\|Ga0315330_10054012	All Organisms → Viruses → Predicted Viral	2683	Open in IMG/M
3300032132\|Ga0315336_1220044	Not Available	684	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.32%
Freshwater	Environmental → Aquatic → Freshwater	1.68%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	36.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.33%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.76%
Coastal	Environmental → Aquatic → Marine → Coastal	10.92%
Strait	Environmental → Aquatic → Marine → Strait	8.40%
Inlet	Environmental → Aquatic → Marine → Inlet	5.04%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.52%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.52%
River	Environmental → Aquatic → Freshwater → River	1.68%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	33.61%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.33%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.92%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.40%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.04%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.04%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.68%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.68%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.68%
Oil-Contaminated	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated	0.84%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.84%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	33.61%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	16.81%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	9.24%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.40%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	5.04%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.04%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.36%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.52%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.68%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.68%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.68%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.68%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.68%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.68%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.68%
Marine	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated → Marine	0.84%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.84%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.84%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.84%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2222084006	Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - oil_dispersant_7	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000158	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 54 02/08/11 100m	Environmental	Open in IMG/M
3300001354	Pelagic Microbial community sample from North Sea - COGITO 998_met_05	Environmental	Open in IMG/M
3300001960	Marine microbial communities from South of Charleston, South Carolina, USA - GS014	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300009103	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300011252	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeate	Environmental	Open in IMG/M
3300012523	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020304	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556110-ERR599176)	Environmental	Open in IMG/M
3300020311	Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX556071-ERR599171)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020401	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)	Environmental	Open in IMG/M
3300020402	Marine microbial communities from Tara Oceans - TARA_B000000609 (ERX555971-ERR599057)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022053	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022888 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_120_MG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300024258 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_120_MG	Environmental	Open in IMG/M
3300024302 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_200_MG	Environmental	Open in IMG/M
3300024324 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_200_MG	Environmental	Open in IMG/M
3300024336 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_135_MG	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025727	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027839	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028436	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - Kryos LI F3	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental	Open in IMG/M
3300031675	Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCM	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2223898541	2222084006	Marine	MYYEVQVVFTEEIPTKNGMREKKNRKMFLVECDSVSVAEAK
DelMOSum2011_100703711	3300000115	Marine	MYYETQVVFTEEIDTKNGVKEKKVRRNYLVECDSVSVAE
DelMOWin2010_101809032	3300000117	Marine	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSVAEAKVNEFLKDSPNEFEV
SI54feb11_100mDRAFT_10472602	3300000158	Marine	MTYYETQVIFTEEIPTKNGVREKKTRRAFLVECDSV
JGI20155J14468_100544525	3300001354	Pelagic Marine	MYYEVQVVFTEEIPTKNGFREKKSRKTFLVECVSVSI
GOS2230_10480672	3300001960	Marine	MYYEAQVLFTEEVDTKNGVKEKKVRRNYLVECDSVSVA*
Ga0066853_102578841	3300005603	Marine	MYFEATVIFIEEIQTKNGVKEKKVRKTYLVECDSVSVAESKVNEWLKT
Ga0075474_101831272	3300006025	Aqueous	MYREYYYEVNVVFTEEIPTKNGFREKKLRRSFLVECMS
Ga0066836_105427341	3300006166	Marine	MYFEATVVFIEEIQTKNGVKEKKVRRVYLVECDSVSV
Ga0098042_11022681	3300006749	Marine	MYYEVQVLFIEEVQVKNGTKEKKVRKNYLVECDACSVAETKV
Ga0098040_10355647	3300006751	Marine	MYFETQVIFTEDIPTKNGVREKKTRRAFLVECDSVSVAEA
Ga0098040_12123622	3300006751	Marine	MYFETQVIFTEEIPTKNGIKEKKTRRAFLVECDSVSVAEA
Ga0098048_12349171	3300006752	Marine	MYFEAQVIFIEEIATKNGTREKKIRRHYLVECDSVTVAEAKVNEYLKDSHYPF
Ga0098054_12343813	3300006789	Marine	MFEVTVIFIEEIATKNGVKEKKIRRNYLVTECDSVSVAEAKIHEYLKDSA
Ga0098054_12554592	3300006789	Marine	MYYEATVVFIEEIQTKNGVKEKKVRKTYLVECDSVSVAESKVNEWLKTS
Ga0070754_101163614	3300006810	Aqueous	MYFEVQVIFTEEIQTKSGIREKQRRKHLLVECDSV
Ga0075479_101843651	3300006870	Aqueous	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSVAEAKVNEFLKDS
Ga0098036_11304941	3300006929	Marine	MFFEATVVFIEEIQMKNGVKEKKVRRSYLVECDSVT
Ga0098046_11399882	3300006990	Marine	MYYEVQVLFIEEVQVKNGTKEKKVRKNYLVECDACSVAETKVREWL
Ga0075460_102601111	3300007234	Aqueous	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSVAE
Ga0102855_10775412	3300007647	Estuarine	MYYEVQVMFVEEIQTKNGVKEKRVRRNYLVDCDAVSVAEAKI
Ga0117901_13127302	3300009103	Marine	MYFEATVVFIEEIQTKNGVKEKKVRKTYLVECDSVSVAEAKVNEWLKDSPFVFE
Ga0114993_103969632	3300009409	Marine	MYYETQVVFTEEIDTKNGVKEKKVRRNYLIECDSVSV
Ga0114997_103616772	3300009425	Marine	MYYETQVVFTEEIDTKNGVKEKKVRRNYLVECDSVSVA
Ga0115554_11108301	3300009472	Pelagic Marine	MFVEEIQTKNGVKEKRVRKNYLVDCEAVSVAETKINE
Ga0115555_14178233	3300009476	Pelagic Marine	MYFEAQVVFIEEIATKNGTREKKTRRHFLVECDSVS
Ga0114933_101407241	3300009703	Deep Subsurface	MYYEATVVFIEEIQTKNGVKEKKVRKTYLVECDSVSVAEAKVNEWLKT
Ga0115000_107325271	3300009705	Marine	MYFEVQVMFVEEIQTKNGVKEKKIRKNYLVQCDSVTV
Ga0115002_107061442	3300009706	Marine	MYYETQVVFTEEIDTKNGVKEKKVRRNYLIECDSVSVAEAKVTEFLKDSAFF
Ga0115001_103640462	3300009785	Marine	MFVEEIQTKNGVKEKKVRRNYLVDCEAVSVAETKMNE
Ga0114999_113424612	3300009786	Marine	MYFEVQVIFVEEIQTKNGVKEKKIRKNYLVQCDSVTVAEAKI
Ga0115012_101079827	3300009790	Marine	MYYEVQVLFIEEVQVKNGTKEKKVRKNYLVECDACSVAE
Ga0098056_12873461	3300010150	Marine	MFEVTVIFIEEIATKNGVKEKKIRRNYLVTECDSVSVAEAKIHEYLKDSAYPFE
Ga0098047_102405922	3300010155	Marine	MYYEATVIFIEEIQMKNGVKEKKVRKTYLVECDSVSVAESKVNE
Ga0151674_11007321	3300011252	Marine	MFVEEIQTKNGVKEKRVRRNYLVDCDAVSVAEAKINEYLKD
Ga0129350_10054321	3300012523	Aqueous	MYFEVQVIFTEEIQTKSGIREKQRRKHLLVECDSVTVAEATVN
Ga0160423_100808835	3300012920	Surface Seawater	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSV
Ga0163111_113673581	3300012954	Surface Seawater	MYFEATVVFIEEIQTKNGVREKKVRKTYLVECDSISVAEAKVNE
Ga0181377_10501971	3300017706	Marine	MYYEVQVVFTEEIPTKNGFREKKLRKSFLVECMSVSVAEAKVNEFL
Ga0181383_10397024	3300017720	Seawater	MYYEVQVLFIEEVQVKNGTKEKKVRKNYLVECDACSVAENKVREWLK
Ga0181398_10082817	3300017725	Seawater	MYFEVQVIFTEEIPTKNGVREKKTRRAFLVECDSVSVAEAK
Ga0181401_10614822	3300017727	Seawater	MYFEVQVIFTEEIPTKNGVREKKTRRAFLVECDSVSVAEA
Ga0181416_10760592	3300017731	Seawater	MYFEVQVIFTEEIPTKNGVREKKTRRAFLVECDSVSVAEAKVNE
Ga0181426_11216022	3300017733	Seawater	MYYEVNVVFTEEIPTKNGFRVKKIRKSFLVECMSVSVAEAKVNE
Ga0181433_10854663	3300017739	Seawater	MYYEVQVLFIEEVQVKNGTKEKKVRKNYLVECEACSVAENKVREWLKNSPF
Ga0181397_10094235	3300017744	Seawater	MYYEVQVMFVEEIQTKNGVKEKRVRKYYLVECDAVS
Ga0181392_12396261	3300017749	Seawater	MYYEVQVMFVEEIQTKNGVKEKRVRKNYLVDCEAVSVAETKINEY
Ga0181422_10791581	3300017762	Seawater	MYFEAQVVFTEEIPTKNGVREKKTRRNFLVECDSVS
Ga0181430_12461582	3300017772	Seawater	MYYEVQVVFTEEIATKNSVREKKTRRAFLVECDSVSVAEA
Ga0181572_108501101	3300018049	Salt Marsh	MYYEAQVVFTEEIPTKNGVREKRTRRSFLVECDSVSV
Ga0181592_102619144	3300018421	Salt Marsh	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSVAEAKV
Ga0181592_105254081	3300018421	Salt Marsh	MYYEAQVVFVEEIPTKNGVREKRTRRAFLVECDSVSVAEAKVNEVL
Ga0181591_107276433	3300018424	Salt Marsh	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSV
Ga0181591_110278741	3300018424	Salt Marsh	MYYEAQVVFTEEIPTKNGVREKRTRRSFLVECDSVSVAEAKVN
Ga0194029_10040625	3300019751	Freshwater	MYYEVQVVFTEEIPIKYGFREKKSRKTFLVECVSVSI
Ga0194024_10297084	3300019765	Freshwater	MYREYYYEVNVVFTEEIPTKNGFREKKLRRSFLVECMSVSVAEAKVNE
Ga0211684_10321512	3300020304	Marine	MYFEVQVIFVEEIQTKNGIKEKKIRKNYLVKCDSVTVAEAKI
Ga0211628_10641902	3300020311	Marine	MYYEAQVVFTEEIDTKNGVKEKKVRRNYLVECDSVSVAEAKVNEFLKDSAFFFEV
Ga0211527_102170312	3300020378	Marine	MYFEATVVFIEEIQMKNGVKEKKVRRSYLVECDSV
Ga0211678_101569001	3300020388	Marine	MFFEATVVFIEEIQMKNGVKEKKVRRSYLVECDSVTVAEAKVNEWVK
Ga0211617_104844191	3300020401	Marine	MYYEAQVVFVEEIPTKNGVREKKTRRSFLVECDSVSVAEAKVN
Ga0211499_100583433	3300020402	Marine	MYFEATVVFIEEIQTKNGVKEKKVRRSYLVECDSV
Ga0211532_102884452	3300020403	Marine	MYYEVQVLFIEEVQVKNGTKEKKVRKNYLVECDACSVAENK
Ga0211587_101433092	3300020411	Marine	MYFEATVVFIEEIQTKNGVKEKKVRRSYLVECDSVTVA
Ga0211587_102435111	3300020411	Marine	MTYYETQVIFTEEIPTKNGVKEKKTRRNFLVECDSVSVAEA
Ga0211644_100938611	3300020416	Marine	MYYEAQVVFVEEIPTKNGVREKKTRRAFLVECDSVSVA
Ga0211528_101945221	3300020417	Marine	MTYFEAQVIFIEEIATKNGTREKKVRQHYLVECDSVTVAEAKVNEYLKDS
Ga0211539_103976442	3300020437	Marine	MYFEATVVFIEEIQTKNGVKEKKVRRNYLVECDSVTVAEAK
Ga0211638_101015294	3300020448	Marine	MYYEVQVLFIEEVQVKNGTKEKKVRKNYLVECDACSVAESKVREWLKDSPFAFD
Ga0211642_105263823	3300020449	Marine	MYYEAQVVFTEEIPTKNGVREKKTRRSFLVECDSV
Ga0211543_101578262	3300020470	Marine	MYYEAQVVFVEEIPTKNGVREKKTRRAFLVECDSVSVAEAKVNEM
Ga0211543_102402682	3300020470	Marine	MYFEATVVFIEEIQMKNGVKEKKVRRSYLVECDSVSVAEAKVN
Ga0211543_105339732	3300020470	Marine	MYFEAQVIFTEEIPTKNGVKEKKTRKAFLVECDSVSVA
Ga0211503_100378585	3300020478	Marine	MYYEATVVFIEEIQTKNGVKEKKVRKTYLVECDSVSVAEAKVNEW
Ga0211503_103230802	3300020478	Marine	MYFEATVVFIEEIQTKNGVKEKKVRKTYLVECDSVSVAEAKVNEWLKTSPFAFE
Ga0222717_101881621	3300021957	Estuarine Water	MYYEVAVVFTEEIQTKNGVREKKVTKNYLVECFAVTAAEAKISEYL
Ga0212030_10448521	3300022053	Aqueous	MYFEVQVIFTEEIQTKSGIREKQRRKHLLVECDSVTVAEATVNSYLKDA
(restricted) Ga0233428_10328211	3300022888	Seawater	MYYETQVVFTEEIDTKNGVKEKKVRRNYLIECDSVSVAEAK
Ga0255751_102129641	3300023116	Salt Marsh	MYYEVNVVFTEEIPTKNGFREKKLRKSFLVECMSV
(restricted) Ga0233440_10160405	3300024258	Seawater	MYYETQVVFTEEIDTKNGVKEKKVRRNYLVECDSVSV
(restricted) Ga0233440_10191234	3300024258	Seawater	MYYETQVVFTEEIDTKNGVKEKKVRRNYLIECDSVSVAEAKVTEFLKDSAF
(restricted) Ga0233449_10260401	3300024302	Seawater	MYYETQVVFTEEIDTKNGVKEKKVRRNYLIECDSVSVA
(restricted) Ga0233443_12762581	3300024324	Seawater	MYYETQVVFTEEIDTKNGVKEKKVRRNYLVECDSVSVAEAKV
(restricted) Ga0233447_11134852	3300024336	Seawater	MYYETQVVFTEEIDTKNGVKEKKVRRNYLVECDSVSVAEAKVTE
Ga0209992_100134531	3300024344	Deep Subsurface	MYYEATVVFIEEIQTKNGVKEKKVRKTYLVECDSVSVAEAKVNE
Ga0208298_10884502	3300025084	Marine	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSVAEAKVNEF
Ga0208666_10084861	3300025102	Marine	MYYEVQVLFIEEVQVKNGTKEKKVRKNYLVECDACSVAETKVREWLKNSPF
Ga0208013_10458161	3300025103	Marine	MTYYETQVIFTEEIPTKNGVREKKTRRAFLVECDSVSVAEAKVNETL
Ga0208793_11716902	3300025108	Marine	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSVAEAK
Ga0208790_10945851	3300025118	Marine	MYFETQVIFTEEIPTKNGVREKKTRRAFLVECDSVSVAEAKVNE
Ga0209348_10968283	3300025127	Marine	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSVAEAKVNE
Ga0209348_11550241	3300025127	Marine	MYFEATVVFIEEIQTKNGVKEKKVRRSYLVECDSVTVAEAK
Ga0209348_11718882	3300025127	Marine	MYYEVQVVFIEEIQTKNGVREKKVRENYLVECDAVSVAEAKVME
Ga0208919_12150941	3300025128	Marine	MFFEATVVFIEEIQMKNGVKEKKVRRSYLVECDSVTV
Ga0209232_11798421	3300025132	Marine	MYFEAQVIFTEEIPTKNGIKEKKTRRNFLVECDSVSVAE
Ga0209336_101343272	3300025137	Marine	MYYEVQVMFVEEIQTKNGVKEKRVRKYYLVECDAVSVAEAKIT
Ga0208149_10805481	3300025610	Aqueous	MYFEVQVIFTEEIQTKSGIREKQRRKHLLVECDSVTVAEATVNNYLKDA
Ga0208643_10267724	3300025645	Aqueous	MYYEVAVVFTEEIQTKNGVREKKTTKNYLVECFAVTAA
Ga0209047_10994191	3300025727	Marine	MYFEATVIFIEEIQTKNGVKEKKVRKTYLVECDSVSVAESKVNEWLKTS
Ga0208425_10183981	3300025803	Aqueous	MYREYYYEVNVVFTEEIPTKNGFREKKLRRSFLVECMSVSVAEAKV
Ga0208425_11086631	3300025803	Aqueous	MYYEVNVVFTEEIPTKNGFREKKIRKSFLVECMSVSVAEAKVNEFLKDSPN
Ga0208545_10799084	3300025806	Aqueous	MFEVNVIFIEEIATKNGVKEKKIRRNYLVMNCDTVSVAEAKIYEHLKDSAYP
Ga0208407_11960401	3300026257	Marine	MYYEATVVFIEEIQTKNGVKEKKVRKTYLVECDSVSVAEAKVNEWLKTSPFAFE
Ga0208764_102524702	3300026321	Marine	MYFEATVVFIEEIQTKNGVKEKKVRRVYLVECDSVS
Ga0209710_11455581	3300027687	Marine	MYFEVQVIFVEEIQTKNGVKEKKIRKNYLVQCDSVTVAEAKINEYL
Ga0209089_101184023	3300027838	Marine	MYYETQVVFTEEIDTKNGVKEKKVRRNYLIECDSVS
Ga0209403_104589271	3300027839	Marine	MYYETQVVFTEEIDTKNGVKEKKVRRNYLVECDSV
Ga0209501_103779021	3300027844	Marine	MYYETQVVFTEEIDTKNGVKEKKVRRNYLVECDSVSVAEAIVTEF
Ga0209404_101265481	3300027906	Marine	MYYEAQVVFVEEIPTKNGVREKKTRRAFLVECDSVS
Ga0256397_10002081	3300028436	Seawater	MSYYEVQVVFIEEIQTKNGSKEKKVRRNYLVECDSA
Ga0183748_10426211	3300029319	Marine	MYYEAQVVFIEEIPTKNGVREKKTRRAFLVECDSVSVA
Ga0308010_12678592	3300031510	Marine	MYYEVAVVFKEEIQTKNGVREKKTTKNYLVECFAVTAA
Ga0302137_12197721	3300031588	Marine	MYFEAQVIFIEEIQTKNGTREKKVRRHYLVECDSVTVAETKVNEHLK
Ga0302122_100713921	3300031675	Marine	MYFEAQVIFIEEIQTKNGTREKKVRRHYLVECDSVT
Ga0307998_10762071	3300031702	Marine	MYFEVQVIFVEEIQTKNGIKEKKIRKNYLVECDSVTVAEAKINEHLKDSHFPF
Ga0315318_102946012	3300031886	Seawater	MYYEATVVFIEEIQMKNGVKEKKVRKTYLVECDSVSVAESKVNEWLKDS
Ga0315327_102103411	3300032032	Seawater	MFEVNVIFIEEIATKNGVKEKKIRRNYLVMNCDTVSVAEAKIYEHL
Ga0315330_100540125	3300032047	Seawater	MYYEVQVMFVEEIQTKNGVKEKRVRKYYLVECDAVSV
Ga0315336_12200442	3300032132	Seawater	MYFETQVIFTEEIPTKNGVREKKTRRAFLVECDSVSVAEAKVNELLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters