Metagenome / Metatranscriptome Family F075276

Overview

Basic Information

• Family ID: F075276
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 119
• Average Sequence Length: 41 residues
• Representative Sequence: GSEDISMEDVLGKGVRKQPAAAKETVDEDVPQVETQTY
• Number of Associated Samples: 110
• Number of Associated Scaffolds: 119

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 103
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.126 % of family members)
• Environment Ontology (ENVO): Unclassified (24.370 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (47.899 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 24.24%
  β-sheet: 0.00%
  Coil/Unstructured: 75.76%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00889	EF_TS	57.98
PF00696	AA_kinase	8.40
PF00627	UBA	3.36
PF00072	Response_reg	0.84
PF14321	DUF4382	0.84
PF05193	Peptidase_M16_C	0.84
PF07244	POTRA	0.84
PF00884	Sulfatase	0.84
PF04879	Molybdop_Fe4S4	0.84
PF00227	Proteasome	0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0264	Translation elongation factor EF-Ts	Translation, ribosomal structure and biogenesis [J]	57.98
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	0.84

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Aquatic	Environmental → Aquatic	16.81%
Plants	Host-Associated → Plants	11.76%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Freshwater	Environmental → Aquatic → Freshwater	9.24%
Sediment	Environmental → Aquatic → Sediment	6.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.20%
Roots	Host-Associated → Plants → Roots	1.68%
Marine	Environmental → Aquatic → Marine	0.84%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.26%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.84%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.04%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.84%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental
3300004608	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome)	Environmental
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300026109	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405 (SPAdes)	Environmental
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1013978871	3300000955	Soil	AEAAGDDISMEDVLGGGTKKAPASAPESADEVPQVESQTF*
JGI12269J14319_101346311	3300001356	Peatlands Soil	GATDLAAVEEPGTEDISMEDVLGSGTRKQSAAAKENASEDVPQVETQTY*
JGI12269J14319_103284501	3300001356	Peatlands Soil	ISMEDVLGAGTRKQPAAAKDTVAEDVPQVETQTY*
JGI12630J15595_100871181	3300001545	Forest Soil	EGAGEAGSEDISMEDVLGKGTRKQPAPAKETVDEDVPQVETQTY*
JGIcombinedJ26739_1013789731	3300002245	Forest Soil	AGAPEAGSEDISMEDVLGKGVRKQPAPANEAVDEDVPQVETQTY*
JGI26338J50219_10179741	3300003367	Bog Forest Soil	NASEDGTGEDISMEDVLGAGTRKQPVAAKDSADEVVPQVETQTY*
Ga0055468_101239531	3300003993	Natural And Restored Wetlands	GSDYGDEGEDVSMEEVLGAGVRKSPVAAKDEEPQVESQSR*
Ga0068924_12774121	3300004608	Peatlands Soil	EEPGTEDISMEDVLGSGTRKQSAAAKENASEDVPQVETQTY*
Ga0066395_105326842	3300004633	Tropical Forest Soil	EASGEDISMEDVLGGGTKKSPAAAQDVADEVPQVESQTF*
Ga0066688_100107835	3300005178	Soil	HAGADDSASEDISMEEVLGAGTRKQPAAAKEEEAGEVPEVETQTY*
Ga0070660_1001567023	3300005339	Corn Rhizosphere	SGSEDISMEDVLGKGVRKQPAAAGETADEDVPQVETQTY*
Ga0070688_1003000041	3300005365	Switchgrass Rhizosphere	ESGSEDISMEDVLGKGVRKQPAAAGETADEDVPQVETQTY*
Ga0070709_107519402	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PEAAEGAAAGEGGGEDISMEDVLGAGTTRKQPAAAAKTEEVPQVESQTTY*
Ga0070741_101371274	3300005529	Surface Soil	GEDISMEDVLGGPARKQPAAAKAQADADEVPQIETQTY*
Ga0070735_100899264	3300005534	Surface Soil	GAGEDISMEDVLGGPARKQPAAAAKTQADTDEVPQIETQTY*
Ga0070697_1002489353	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VDSAATEDISMEDVLGAGVRKPAAAAATEETAEVPQVETF*
Ga0066704_106770312	3300005557	Soil	AGGDSSTEDISMEDVLGAGTRRKAAAAKEEAGEDVPQVETQAY*
Ga0068855_1021192441	3300005563	Corn Rhizosphere	AEELAAAGAPEAGAEDISMEDVLGAGVRKQPAAAKEAVEDEVPQVETQTF*
Ga0070762_100090215	3300005602	Soil	AAEDISMEDVLGAGTRKQPVAAKEAADETVPQVETQTY*
Ga0066788_101192012	3300005944	Soil	EDISMEDVLGKGVRKQPAPAKEAVEEDVPQVETQTY*
Ga0066787_100678241	3300005950	Soil	EGSTEDISMEDVLGGGVKPVAAAKEAVEEVPATVETTS*
Ga0066696_102601461	3300006032	Soil	ISMEEVLGKGTRKQPAARKEEVQEEASPVETQTF*
Ga0075023_1006199771	3300006041	Watersheds	AIDAGAEDISMEDVLGSGTKKAPAAAKEVADEVPQVESQTF*
Ga0075029_1003877781	3300006052	Watersheds	TPESASEDISMEDVLGKGVRKQPAPTKETVDEDVPQVETQTY*
Ga0075017_1001225091	3300006059	Watersheds	AGTPESASEDISMEDVLGKGVRKQPAPTKETVDEDVPQVETQTY*
Ga0075015_1002886921	3300006102	Watersheds	EDISMEDVLGAGTRKQPAAAKEDSAEVPQVETQTF*
Ga0075015_1008738231	3300006102	Watersheds	IDAGAEDISMEDVLGSGTKKAPAAAKEVADEVPQVESQTF*
Ga0075018_105535622	3300006172	Watersheds	DLNAAEDASSEEISMEDVLGAGARKQPAAAKESAGENVPQVETQTY*
Ga0070716_1002836723	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SPEAGAEDISMEDVLGKGVRKQPAPAKETVDEDVPQVETQTY*
Ga0068871_1002317821	3300006358	Miscanthus Rhizosphere	SEDISMEDVLGKGVRKQPAAAGETADEDVPQVETQTY*
Ga0068871_1002671844	3300006358	Miscanthus Rhizosphere	DISMEDVLGGGTKKQPAPAKAAAEEAPEVETQTY*
Ga0066658_100038551	3300006794	Soil	SMEDVLGGGTRKQHSAAKQRADDEVPQVETQTYP*
Ga0079220_120249052	3300006806	Agricultural Soil	AEQEDISMEEVLGKGTRKQPVTAKEEAAEEASPVETQTF*
Ga0075425_1017992692	3300006854	Populus Rhizosphere	DSSAEDISMEDVLGAGTRRKAAAAKEEAGEDVPQVETQAY*
Ga0075426_102610181	3300006903	Populus Rhizosphere	DISMEDVLGGSARKRPEAAKEQAAEEVPQVESQHTF*
Ga0099795_104917711	3300007788	Vadose Zone Soil	EDISMEDVLGKGVRKQPAPANETVDEDVPQVETQTY*
Ga0116135_11303462	3300009665	Peatland	EDISMEDVLGAGTRKQPAAAKESVADDVPQVETQTY*
Ga0116135_12883241	3300009665	Peatland	DAGAEDISMEDVLGAGTRKQPVAAKETVADDVPQVETQTY*
Ga0116223_102648321	3300009839	Peatlands Soil	EDISMEDVLGSGTRKQSAAAKENASEDVPQVETQTY*
Ga0126380_119351171	3300010043	Tropical Forest Soil	TAEAGAEDISMEDVLGGGTKKAPATAKEEADEVPQVESQTF*
Ga0126382_106859522	3300010047	Tropical Forest Soil	AEAGFDAGSDDISMEDVLGSGTKKAPAADKETADEVPQVESQTF*
Ga0134063_105870201	3300010335	Grasslands Soil	QEDISMEEVLGKGTRKQPVAAKEEAAEEASPVETQTF*
Ga0134126_101154701	3300010396	Terrestrial Soil	TGEDISMEDVLGGSTRKRPEAAKEAAAEEVPQVESQHTY*
Ga0138573_12028651	3300011089	Peatlands Soil	EDISMEEVLGAGTRKQPVAAKESVDETIPQVETQTY*
Ga0137392_107179811	3300011269	Vadose Zone Soil	ISMEDVLGGRTRKQPDAAKERVREDVPEVETQTY*
Ga0137389_103349681	3300012096	Vadose Zone Soil	EDISMEEVLGAGTRKQAETAKEEASEVPEVETQTY*
Ga0137389_103865821	3300012096	Vadose Zone Soil	VAEAEQEDISMEEVLGKGTRKQPVTAKEEAAEEASPVETQTF*
Ga0137399_109155712	3300012203	Vadose Zone Soil	TGEDISMEDVLGGPTRKQPATAAKAEAAPQVETQTTYS*
Ga0137362_116000321	3300012205	Vadose Zone Soil	GEDISMEDVLGGGTKKAPAAAQDVADEVPQVESQTF*
Ga0137381_106492501	3300012207	Vadose Zone Soil	GAEDISMEDVLGGGTKKAPSTAQDAADEVPQVESQTF*
Ga0137376_101261351	3300012208	Vadose Zone Soil	GEDISMEEVLGAGVRKQPAAAKEAVDEEDVPQVETQTY*
Ga0137376_109864391	3300012208	Vadose Zone Soil	ISMEEVLGKGTRKQPVTAKEEAAEEASPVETQTF*
Ga0137387_106615632	3300012349	Vadose Zone Soil	EQEDISMEEVLGKGTRKQPVTAKEEAAEEASPVETQTF*
Ga0137361_103345941	3300012362	Vadose Zone Soil	GSEDISMEDVLGKGVRKQPAPANEAVDEDVPQVETQTY*
Ga0137398_108735842	3300012683	Vadose Zone Soil	SEDISMEDVLGKGVRKQPAPANETVDEDAPQVETQTY*
Ga0137396_112378782	3300012918	Vadose Zone Soil	ELQAAGAPEAGSEDISMEDVLGKGVRKQPAPANETVDEDVPQVETQTY*
Ga0137419_107571792	3300012925	Vadose Zone Soil	GEAGLDAGAEDISMEDVLGSGTKKAPAAEKAAADEVPQVESQTF*
Ga0137416_117570222	3300012927	Vadose Zone Soil	GADDSASEDISMEEVLGAGTRKQPAAAKEEEAGEVPEVETQTY*
Ga0137407_112703091	3300012930	Vadose Zone Soil	TGEDISMEEVLGAGVRKQPAAAKEAVDEDVPQVETQTY*
Ga0153915_110600531	3300012931	Freshwater Wetlands	GPGTENVSMEEVLGGGRKGPAGAKEESDVPQVETQTF*
Ga0164300_102856891	3300012951	Soil	EAGAEDISMEDVLGGGTKKAPATAQDAAEEVPRVESQTL*
Ga0164303_100824901	3300012957	Soil	EDISMEDVLGGGTKKAPATAQDAAEEVPQVESQTL*
Ga0164303_115385672	3300012957	Soil	SPEAGAEDISMEDVLGKGVRKQPAPSKETVDEDVPQVETQTY*
Ga0153916_125922811	3300012964	Freshwater Wetlands	AEAGGEDLTMEDVLGAGTRKQPAAAKAAKQEESEVPQTQTF*
Ga0164304_117489611	3300012986	Soil	EELAAAGAPESGSEDISMEDVLGKGVRKQPAAASETADEDVPQVETQTY*
Ga0164305_100358265	3300012989	Soil	AEAGAEDISMEDVLGGGTKKAPATAQDAAEEVPQVESQTL*
Ga0157373_100494224	3300013100	Corn Rhizosphere	AAAGAPESGSEDISMEDVLGKGVRKQPAAAGETADEDVPQVETQTY*
Ga0182024_115409581	3300014501	Permafrost	SAPAEGAVEAGAEDISMEDVLGTGGRKQPAVVEEDEGEVPHQLETRTF*
Ga0132258_103723766	3300015371	Arabidopsis Rhizosphere	SEAAPDTAAEAGGEDISMEEVLGAGVRKQPAASKEAVDEDVPQVETQTY*
Ga0132257_1000244451	3300015373	Arabidopsis Rhizosphere	ISMEDVLGKGVRKQPAAAGETADEDVPQVETQTY*
Ga0187802_102252692	3300017822	Freshwater Sediment	AEEAAAARAADGASQFADVEEAGAEDISMEDVLDGGARKQPAAAKDDASADVPQVETQTY
Ga0187802_102957031	3300017822	Freshwater Sediment	AEDAGTEDISMEDVLGAGTRKQPAAAKDTVAEDVPQVETQTY
Ga0187825_100734583	3300017930	Freshwater Sediment	GEDISMEDVLGGGTKKAAAAAQDAADEVPQVESQTF
Ga0187819_107833371	3300017943	Freshwater Sediment	AEDISMEDVLGGDARKQPAAAPEPEADIPQVETRSF
Ga0187785_106330581	3300017947	Tropical Peatland	DISMEEVLGAGVRKQPAPAKEVVDEDVPQVETQTY
Ga0187872_100456561	3300018017	Peatland	EAGTEDISMEEVLGAGTRKQPVAAKESVDEAVPQVETQTY
Ga0187855_101627991	3300018038	Peatland	ASEDGTGEDISMEDVLGAGTRKQPAAAKESVADDVPQVETQTY
Ga0187765_103313031	3300018060	Tropical Peatland	ATLHAASEEESAAAAVVPAGEDAEDISMEDVLGAGTRKQPAAAKQETEVPQVETQTF
Ga0187770_100168235	3300018090	Tropical Peatland	VGMTASADDSAAEEISMEEVLGAGMPKQPATHNEAGEAAPEVEHQTH
Ga0193715_10900141	3300019878	Soil	EAGAEDISMEEVLGSGVRKQPAAAKEVVDEDVPQVETQTY
Ga0210407_109294662	3300020579	Soil	SESSEEAIGEDISMEDVLGAGTKKAPAAAKEVAEEVPQVESQTF
Ga0179596_103285351	3300021086	Vadose Zone Soil	LQAAGAPEAGSEDISMEDVLGKGVRKQPAPANEAVDEDVPQVETQTY
Ga0210397_107330642	3300021403	Soil	DDGTGEDISMEDVLGAGTRKQPSAAKESVAEDVPQVETQTY
Ga0210394_103964252	3300021420	Soil	DISMEDVLGAGTRKQPSAAKESVSEDIPQVETQTY
Ga0126371_127177452	3300021560	Tropical Forest Soil	GEMPGDDISMEDVLGGGTKKAPAAAKEEADEVPQVESQTF
Ga0207656_101290031	3300025321	Corn Rhizosphere	PESGSEDISMEDVLGKGVRKQPAAAGETADEDVPQVETQTY
Ga0208480_11365582	3300025633	Arctic Peat Soil	TGTETEDISMEEVLGAGTRKQPIAAKESAVEAPEVEHQTF
Ga0207692_104308112	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EHAAEASGEDISMEDVLGGGTKKAPAAAQDVADEVPQVESQTF
Ga0207645_110213432	3300025907	Miscanthus Rhizosphere	AGAEDISMEDVLGKGVRKQPAPAKETVDEDVPQVETQTY
Ga0207695_105443822	3300025913	Corn Rhizosphere	EDISMEDVLGGGVRKQPAAAKDEEPADAPQVETQAF
Ga0207700_110540321	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EGAETTGEDISMEDVLGGSTRKRPEAAKEAAAEEVPQVESQHTY
Ga0207665_112764092	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	IAEGDSATEDISMEDVLGAGTRRKAAAAKEEAGEDVPQVETQAY
Ga0207668_114903472	3300025972	Switchgrass Rhizosphere	AAAGAPESGSEDISMEDVLGKGVRKQPAAASETADEDVPQVETQTY
Ga0207676_101875231	3300026095	Switchgrass Rhizosphere	TGEEISKEDVLGGGTKKQPAPAKAAAEEAPEVETQTY
Ga0208774_10497531	3300026109	Rice Paddy Soil	ILAAEAGAGEDISMEDVLGGGANRKQPAAAKAAADSDEVPQIETQTY
Ga0209687_12490412	3300026322	Soil	SASEDTGEDISMEDVLGGGTKKQPAPAKAAAEEAPEVETQTY
Ga0209152_102212912	3300026325	Soil	SSAEDISMEDVLGAGTRRKAAAAKEEAGEDVPQVETQAY
Ga0209802_10890773	3300026328	Soil	AESGAEEAGAEDISMEEVLGAGTRKQAETAKEEAGEVPEVETQTY
Ga0209057_11494311	3300026342	Soil	QEDISMEEVLGKGTRKQPVAAKEEAAEEASPVETQTF
Ga0257164_10565742	3300026497	Soil	EDISMEDVLGKGVRKQAAPAIENVDEDVPQVETQTY
Ga0209808_11487862	3300026523	Soil	LTASDSSTEDISMEDVLGAGTRRKAAAAKEEAGEDVPQVETQAY
Ga0209160_10990051	3300026532	Soil	AEEAGAEDISMEEVLGAGTRKQAETAKEEAGEVPEVETQTY
Ga0209161_104789812	3300026548	Soil	GDSSAEDISMEDVLGAGTRRKAAAAKEEAGEDVPQVETQAY
Ga0209474_105532392	3300026550	Soil	GTEDISMEDVLGGGTKKQPSAAKEGAEELPQVETQTYS
Ga0209734_10421572	3300027535	Forest Soil	SDAGSEDISMEDVLGKGVRKQPAAAKETVDEDVPQVETQTY
Ga0208043_11672171	3300027570	Peatlands Soil	ASEDAGAEDISMEDVLGAGTRKQPVAAKESVADDVPQVETQTY
Ga0209220_10933321	3300027587	Forest Soil	GSEDISMEDVLGKGTRKQPAPAKETVDEDVPQVETQTY
Ga0209733_10864021	3300027591	Forest Soil	ISAADDSGGEDISMEDVLGAGTRKQPAATKDTVAEDIPQVETQTY
Ga0208324_10487641	3300027604	Peatlands Soil	RGMDINAVEDAGTEDISMEDVLGAGTRKQPAAAKDAVAEEVPQVETQTY
Ga0209810_13636442	3300027773	Surface Soil	IMAAEAGAGEDISMEDVLGGPTRKQPAPAKTQADTDEVPQIETQTY
Ga0209060_105407072	3300027826	Surface Soil	EIMAAEAGAGEDISMEDVLGGPARKQPAAAKAQADTDEVPQIETQTY
Ga0209693_105295471	3300027855	Soil	GGEDISMEDVLGGGTKKAPSAAQDVADEVPQVESQTF
Ga0209275_105895661	3300027884	Soil	ESGIDIDASEDGAAEDISMEDVLGAGTRKQPVAAKEAADETVPQVETQTY
Ga0209068_105095822	3300027894	Watersheds	EAGAEDISMEDVLGKGVRKQPAPANETVDEDVPQVETQTY
Ga0209068_108946212	3300027894	Watersheds	GGVDIRAAEDAGAEDISMEDVLGAGTRKQPAAAKDSTAEDVPQVETQTY
Ga0209526_104251692	3300028047	Forest Soil	QAAGAPEAGSEDISMEDVLGKGVRKQPAPANETVDEDVPQVETQTY
Ga0137415_112259692	3300028536	Vadose Zone Soil	GADDSASEDISMEEVLGAGTRKQPAAAKEEEAGEVPEVETQTY
Ga0170823_105665892	3300031128	Forest Soil	GSEDISMEDVLGKGVRKQPAAAKETVDEDVPQVETQTY
Ga0307468_1001295083	3300031740	Hardwood Forest Soil	PAAEAAGDDISMEDVLGGGTKKAPASAPESADEVPQVESQTF