Metagenome / Metatranscriptome Family F075261

Basic Information
Family ID	F075261
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	52 residues
Representative Sequence	AAPLAVGVFLGSLLGARLAPRIHTKVVVYLLVGVMLYLAGHLTLHLLRGAL
Number of Associated Samples	106
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.69 %
% of genes near scaffold ends (potentially truncated)	97.48 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (97.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (10.084 % of family members)
Environment Ontology (ENVO)	Unclassified (16.807 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.101 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.70% β-sheet: 0.00% Coil/Unstructured: 44.30%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF07843	DUF1634	90.76
PF02470	MlaD	6.72
PF02567	PhzC-PhzF	1.68
PF13518	HTH_28	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG4272	Uncharacterized membrane protein	Function unknown [S]	90.76
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	1.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.20 %
Unclassified	root	N/A	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.04 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.20 %
Unclassified	root	N/A	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.04 %
Unclassified	root	N/A	2.52 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.84 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.04 %
Unclassified	root	N/A	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.04 %
Unclassified	root	N/A	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %
Enterococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.04 %
Unclassified	root	N/A	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %
Enterococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001100\|JGI12703J13194_104947	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300001174\|JGI12679J13547_1001354	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300001471\|JGI12712J15308_10021872	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300001593\|JGI12635J15846_10102902	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300001661\|JGI12053J15887_10416034	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300003505\|JGIcombinedJ51221_10174033	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300004091\|Ga0062387_101487392	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300004156\|Ga0062589_100983012	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005434\|Ga0070709_10187063	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300005439\|Ga0070711_100030169	All Organisms → cellular organisms → Bacteria	3587	Open in IMG/M
3300005451\|Ga0066681_10328312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	938	Open in IMG/M
3300005541\|Ga0070733_10656300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	704	Open in IMG/M
3300005568\|Ga0066703_10790065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus	543	Open in IMG/M
3300005602\|Ga0070762_10036801	All Organisms → cellular organisms → Bacteria → Proteobacteria	2648	Open in IMG/M
3300005602\|Ga0070762_11079052	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005610\|Ga0070763_10146862	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300006050\|Ga0075028_100078710	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300006052\|Ga0075029_100538196	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300006052\|Ga0075029_101244435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	521	Open in IMG/M
3300006173\|Ga0070716_100082861	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300006755\|Ga0079222_10259440	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300006797\|Ga0066659_10250494	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300009523\|Ga0116221_1307758	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300009624\|Ga0116105_1141526	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300009759\|Ga0116101_1003927	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300010336\|Ga0134071_10791660	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300010359\|Ga0126376_13162358	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300010362\|Ga0126377_12151085	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300010376\|Ga0126381_104161130	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300010379\|Ga0136449_104090906	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300010379\|Ga0136449_104581952	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300010396\|Ga0134126_12809071	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300011120\|Ga0150983_12897321	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300011120\|Ga0150983_13536967	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300011269\|Ga0137392_10078107	All Organisms → cellular organisms → Bacteria	2563	Open in IMG/M
3300012209\|Ga0137379_11264743	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300012212\|Ga0150985_110497686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1530	Open in IMG/M
3300012356\|Ga0137371_11080141	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300012363\|Ga0137390_11754849	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300012927\|Ga0137416_10919496	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012930\|Ga0137407_11383339	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300012955\|Ga0164298_11379098	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300013296\|Ga0157374_12130035	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300014169\|Ga0181531_10018515	All Organisms → cellular organisms → Bacteria	3991	Open in IMG/M
3300014169\|Ga0181531_10436550	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300014498\|Ga0182019_10871570	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300015167\|Ga0167661_1075415	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300017822\|Ga0187802_10070369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300017823\|Ga0187818_10199692	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300017933\|Ga0187801_10481308	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300017937\|Ga0187809_10148618	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300017948\|Ga0187847_10394838	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300017948\|Ga0187847_10721787	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300017972\|Ga0187781_10122654	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300017973\|Ga0187780_10119558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1820	Open in IMG/M
3300017973\|Ga0187780_10924859	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300018006\|Ga0187804_10482346	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300018062\|Ga0187784_10109016	All Organisms → cellular organisms → Bacteria → Acidobacteria	2256	Open in IMG/M
3300018085\|Ga0187772_10025522	All Organisms → cellular organisms → Bacteria	3461	Open in IMG/M
3300018085\|Ga0187772_10766698	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300018090\|Ga0187770_11799249	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300018431\|Ga0066655_11145564	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300018468\|Ga0066662_11730740	Not Available	654	Open in IMG/M
3300020582\|Ga0210395_11102100	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300020583\|Ga0210401_10550351	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300021178\|Ga0210408_11068505	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300021401\|Ga0210393_10870016	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300021405\|Ga0210387_10441352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300021406\|Ga0210386_11650813	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300021433\|Ga0210391_10273220	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300021433\|Ga0210391_10431026	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300021474\|Ga0210390_11591367	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300021477\|Ga0210398_11496348	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300021479\|Ga0210410_10400741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300021560\|Ga0126371_11960712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	704	Open in IMG/M
3300022557\|Ga0212123_10164351	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300024176\|Ga0224565_1016180	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300025929\|Ga0207664_10201259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300025931\|Ga0207644_10927510	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300026557\|Ga0179587_11013121	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300027080\|Ga0208237_1038101	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300027559\|Ga0209222_1090606	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300027676\|Ga0209333_1172126	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300027803\|Ga0209910_10007053	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300027869\|Ga0209579_10064423	All Organisms → cellular organisms → Bacteria → Acidobacteria	1940	Open in IMG/M
3300027884\|Ga0209275_10295773	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300027898\|Ga0209067_10415054	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300027903\|Ga0209488_10388481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300027908\|Ga0209006_10264435	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300028666\|Ga0265336_10064860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300028759\|Ga0302224_10314342	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300028776\|Ga0302303_10296706	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300028780\|Ga0302225_10601647	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300029999\|Ga0311339_10253585	All Organisms → cellular organisms → Bacteria → Acidobacteria	1933	Open in IMG/M
3300030045\|Ga0302282_1358623	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300030058\|Ga0302179_10499271	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300030509\|Ga0302183_10159124	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300030509\|Ga0302183_10430742	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300030760\|Ga0265762_1123031	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300031090\|Ga0265760_10222266	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300031231\|Ga0170824_107635519	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300031231\|Ga0170824_109419961	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300031231\|Ga0170824_128747951	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300031239\|Ga0265328_10273504	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300031258\|Ga0302318_10451880	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300031446\|Ga0170820_12732651	Not Available	1260	Open in IMG/M
3300031474\|Ga0170818_115164494	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300031708\|Ga0310686_118709771	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031715\|Ga0307476_10967289	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300031754\|Ga0307475_11218734	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300031939\|Ga0308174_10248732	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300032783\|Ga0335079_10753061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300032783\|Ga0335079_11498574	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300032892\|Ga0335081_12010663	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300032897\|Ga0335071_10409567	All Organisms → cellular organisms → Bacteria → Acidobacteria	1309	Open in IMG/M
3300033433\|Ga0326726_11467933	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300034124\|Ga0370483_0285318	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300034163\|Ga0370515_0213940	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.80%
Host-Associated	Host-Associated	4.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.51%
Aquatic	Environmental → Aquatic	14.29%
Plants	Host-Associated → Plants	4.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.27%
Freshwater	Environmental → Aquatic → Freshwater	10.08%
Peat	Environmental → Terrestrial → Peat	8.40%
Sediment	Environmental → Aquatic → Sediment	3.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.84%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.02%
Loam	Environmental → Terrestrial → Soil → Loam	16.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.84%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.20%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.36%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.68%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.84%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.84%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.84%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.84%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001100	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1	Environmental	Open in IMG/M
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12703J13194_1049473	3300001100	Forest Soil	RGDILVELAAPLAVGVFLGSLLGARLAPRIQTKYVMYLLVAIMLYLAGHLFFHVFTGGRTV*
JGI12679J13547_10013541	3300001174	Forest Soil	PLAVGVFVGSLLGARLAPRIRTKVVVYLLVGVMFYLAGHLIIHLLRGWL*
JGI12712J15308_100218721	3300001471	Forest Soil	GDILVEIAAPLAVGVFLGSLLGARLAPRIHNRHLAYLLVAIMLYLAASLLIHLFRGGWA*
JGI12635J15846_101029024	3300001593	Forest Soil	LVQYAAPLAVGVFMGSLLGARVAPRINTKVVVYLLVGVMFYLAGHLIIHLLRGWL*
JGI12053J15887_104160343	3300001661	Forest Soil	VGVFLGSLLGARMAPRIHAKYVVYLLVAIMLYLAAHLIVHLLRTGMA*
JGIcombinedJ51221_101740333	3300003505	Forest Soil	YYRRGDILVEYAAPLAVGVFVGSLLGARVAPRVHTKVVVYLLCGVMFYLAGHLLIHLLRGWL*
Ga0062387_1014873921	3300004091	Bog Forest Soil	AAPLAVGVFVGSLLGARLAPRIQTKYVIYLLVGIMFYLACHLAVHLLRGGAA*
Ga0062589_1009830123	3300004156	Soil	VGVFAGSLLGARLAPRVHAKYVIYLLVVVMFYLSGNMLVHFYREFLR*
Ga0070709_101870633	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VYYRRGDILVQYAAPMSVGVFLGSMLGARLAPRIHTKVVVYLLVGVMLYLAGHLSIHLLRGLL*
Ga0070711_1000301691	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RRGDILVQYAAPLAVGVFMGSLLGARIAPRVHTKVVVYLLVGVMFYLAGHLLVHLLRGWL
Ga0066681_103283123	3300005451	Soil	VEVAAPLAVGVFLGSLLGARMAPRIHAKYVVYLLVAIMLYLATHLIVHLLRTGMA*
Ga0070733_106563003	3300005541	Surface Soil	ILIEYAAPLAVGVFVGSLLGARLAPRVHTRVLAYLLVVIMLFLSVQMFLHLLRGWL*
Ga0066703_107900652	3300005568	Soil	LVEIAAPLAVGVFLGSLLGARLAPRIQTKYVVYLLVAIMLYLAGHLCVHLFTGAAA*
Ga0070762_100368011	3300005602	Soil	AVGVFLGSLLGARLAPRIHTRHLAYLLVAIMLYLAGSLLFHLFRGGLA*
Ga0070762_110790522	3300005602	Soil	GDILVGLAAPLAVGVFLGSLLGARLAPRIHTKYVVYLLVAIMLYLAGHLFVHLLTGKSA*
Ga0070763_101468621	3300005610	Soil	GVFLGSLLGARLAPRIHTKYVVYLLVAIMLYLAGHLFVHLLTGGAA*
Ga0075028_1000787101	3300006050	Watersheds	LVDVAAPLAVGVFMGSLLGARYAARIHTKVIVYLLVGVMFYLAIHLGYHLLRGVL*
Ga0075029_1005381961	3300006052	Watersheds	LVQAAAPLAVGVFLGSLLGARMAPRVHRKYVVYLLVAIMFYLSAHLLLHLLRGGL*
Ga0075029_1012444352	3300006052	Watersheds	VQYAAPLAVGVFMGSLLGARIAPRVHTKVVVYLLVGVMLYLAGHLTIHLLGWL*
Ga0070716_1000828611	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LAVGVFLGSLLGARLAPRVHTRIVMYLLVAVMLYLAGHLIFHLLQVGL*
Ga0079222_102594403	3300006755	Agricultural Soil	CCRVFAGVLRRVARRGDILVEVAAPLAVGVFLGSLLGARLSPRIHKKVVVYLLVGVMFYLAGHLLLHLAQVHL*
Ga0066659_102504943	3300006797	Soil	RGDILVEVAAPLAVGVFLGSLLGARMAPRIHAKYVVYLLVAIMLYLATHLIVHLLRTGMA
Ga0116221_13077581	3300009523	Peatlands Soil	IAAPLAVGVFLGSLLGARLAPRIRTKYVVYLLVAIMLYLAGHLFLHLLTGRAA*
Ga0116105_11415263	3300009624	Peatland	AVGVFIGSLLGARLAPRVRTKVVVYLLVGVMFYLAGSLILHLVRGWL*
Ga0116101_10039271	3300009759	Peatland	EVAAPLAVGVFMGSLLGARMAPRIQTKYVVYLLVGIMLYLAGHMLVHLFAGGAA*
Ga0134071_107916602	3300010336	Grasslands Soil	AVGVFLGSLLGARLAPRVHARHVVFLLVAIMLYLAGHLLVHLATGGTA*
Ga0126376_131623582	3300010359	Tropical Forest Soil	PLAVGVFLGSLLGARLAPRVHTKVVMYLLVGIMLYLAGHLVSHLLRGAA*
Ga0126377_121510851	3300010362	Tropical Forest Soil	IAAPLAVGVFLGSLLGARLAPRVHTKIVVYLLVAVMLYLAGHLTIHLLHEVL*
Ga0126381_1041611303	3300010376	Tropical Forest Soil	AEIAAPLAVGVFLGSLLGARLAPRIHTKIVVYLLVAVMLYLAGHLTFHLLRGIL*
Ga0136449_1040909061	3300010379	Peatlands Soil	YRRGDILVQYAAPLAVGVFLGSLLGARLCPRIHTKIVMYLLVAIMLYLSGHLCFHLLRGWL*
Ga0136449_1045819521	3300010379	Peatlands Soil	ILVQYAAPLAVGVFLGSLLGARLCPRIHTKIVVYLLVAIMLYLSGHLFLHLLRGWL*
Ga0134126_128090712	3300010396	Terrestrial Soil	APLAVGVFLGSLLGARLSPRIHKKVVVYLLVGVMFYLAGHLLLHLAKVHL*
Ga0150983_128973211	3300011120	Forest Soil	IVVELAAPLAVGVFMGSLLGARMAPRIHAKYVMYLLVAIMLYLAGHLILHLLKVRL*
Ga0150983_135369671	3300011120	Forest Soil	DILVTLAAPLAVGVFAGSLLGARLAPRIRTKYVVYLLVAITLYLAGHLIFHLLKGGAA*
Ga0137392_100781074	3300011269	Vadose Zone Soil	APLAVGVFMGSLLGARLAPRIRTRYIVYLLVAIMLYLAGHLLVHLARGGAA*
Ga0137379_112647432	3300012209	Vadose Zone Soil	PLAVGVFVGSLLGARMAPRIHTKIVVYLLVGLMFYLAGHLLIHLLRGWL*
Ga0150985_1104976863	3300012212	Avena Fatua Rhizosphere	PLAVGVFVGSLIGARLAPRIHTKVVVYLLVGVMLYLAAHLSFHLLKGVL*
Ga0137371_110801412	3300012356	Vadose Zone Soil	APLAVGVFVGSLLGARMAPRIHTKIVVYLLVGVMFYLAGHLLIHLLRGWL*
Ga0137390_117548493	3300012363	Vadose Zone Soil	GVFLGSLLGARMAPRIHAKYVVYLLVAIMLYLAAHLIVHLLRTGMA*
Ga0137416_109194963	3300012927	Vadose Zone Soil	APLAVGVFLGSLLGARMAPRIQAKYVVYLLVAIMVYLAAHLIVHLLRTGRA*
Ga0137407_113833392	3300012930	Vadose Zone Soil	VGVFLGSLLGARLAPRIHSKYVVYLLVAIMLYLSGHLAFHLLRRWL*
Ga0164298_113790981	3300012955	Soil	AAPLAVGVFVGSLLGARLAPRVHTKIVVYLLVGVMFYLAGHLAIHLLRGGM*
Ga0157374_121300351	3300013296	Miscanthus Rhizosphere	PLAVGVFMGSLLGARMAPRIHTKIVVYLLVAVMLYLAGHLTLHLLGIL*
Ga0181531_100185151	3300014169	Bog	APLAVGVFLGSLLGARLAPRIRTKYVVYLLVGIMLYLAVHLCVHLFTGGAV*
Ga0181531_104365503	3300014169	Bog	VEIAAPLAVGVFLGSLLGARLAPRIRTKYVVYLLVAIMLYLSGHLLTHLFSGGAA*
Ga0182019_108715703	3300014498	Fen	EYAAPLSVGVFLGSLLGARLAPRIHTKVVVYLLVGVMLYLAGHLAIHLLRGWL*
Ga0167661_10754152	3300015167	Glacier Forefield Soil	AAPMSVGVFMGSMLGARLAPRIHTKVVVYLLVGVMLYLAGHLSIHLLRGLL*
Ga0187802_100703693	3300017822	Freshwater Sediment	VQVAAPLAVGVFVGSLLGARLAPRVHSKIVVYLLVGVMLYLAGHLTFHLLRGLL
Ga0187818_101996923	3300017823	Freshwater Sediment	LVEIAAPLAVGVFLGSLLGARLTPRIQTRYVMYLLVAIMLYLAGHLVVHLMTGGPA
Ga0187801_104813082	3300017933	Freshwater Sediment	APLAVGVFLGSLLGARLAPRVHTRVVVYLLVAIMFYLSAHMFLHLLWGWQ
Ga0187809_101486183	3300017937	Freshwater Sediment	GVFLGSLLGARLSPRIHKKVVVYLLVGVMFYLAAHLLLHLAKVHL
Ga0187847_103948381	3300017948	Peatland	GVFLGSLLGARLAPRIKTRYVIYLLVAIMFYLAGHLIVHLFKGGAA
Ga0187847_107217872	3300017948	Peatland	GDILVDYAAPLAVGVFLGSLLGARLAPRVHSKVVVYLLVGVMFYLAGHLIFHLLRGWL
Ga0187781_101226543	3300017972	Tropical Peatland	PLAVGVFLGSLLGARLAPRVHTKVVVYLLVVIMLYLSAHMLIHILGSL
Ga0187780_101195581	3300017973	Tropical Peatland	DILVQYAAPLAVGVFLGSLLGARLAPRIHTKIVVYLLVAIMFYLSGHLFLHLLRGWL
Ga0187780_109248591	3300017973	Tropical Peatland	IAAPLAVGVFLGSLLGARLCPRIHTKIVVYLLVGVMLYLAAHLTIHLLQGRL
Ga0187782_112616091	3300017975	Tropical Peatland	VFLGSLLGARLAPRIHTKVVMYLLIAIMFYLSGHMFLHLLGRL
Ga0187804_104823463	3300018006	Freshwater Sediment	AAPLAVGVFLGSLLGARLAPRIHTKVVVYLLVGVMLYLAGHLTLHLLRGAL
Ga0187784_101090161	3300018062	Tropical Peatland	VGVFLGSWLGARLAPRVHSKVVVYLLVGIMLYLAGHLVSHLLRGLP
Ga0187772_100255226	3300018085	Tropical Peatland	LAVGVFAGSLLGARLAPRIHTKYVVYLLVAIMLYLAGHLIVHLLKGGAA
Ga0187772_107666981	3300018085	Tropical Peatland	GDILIPYAAPLAVGVFVGSLLGARLAPRIHSKVVMYLLVAIMFYLSGHMFLHLMGWL
Ga0187770_117992491	3300018090	Tropical Peatland	ILVQYAAPLAVGVFMGSLLGARLAPRIHTKVVVYLLVAIMFYLSGHLFLHLLRGAL
Ga0066655_111455642	3300018431	Grasslands Soil	VVAVLLGVLGFRGGLLAARLAPRVHKRIVVYLLVAVMFYLAGHLLLHLAQVHL
Ga0066662_117307401	3300018468	Grasslands Soil	LAAAALGLFVGSLLGPGSAPCSHSKVVFDLLVGGMFYLAGHLIFHLLRGWL
Ga0210395_111021002	3300020582	Soil	APLAVGVFGGSLLGARMAPRINTKVVVYLLVGVMLYLAGHLIIHLLRGRL
Ga0210401_105503511	3300020583	Soil	AAPLAVGVFLGSLLGARLAPRIHTKYVVYLLVAIMLYLAGHLFVHLLTGGAA
Ga0210408_110685053	3300021178	Soil	VYYRRGDILVQYAAPLAVGVFLGSLLGARLAPRVHTKIVVYLLVAVMLYLSGHLFVHLLRGWL
Ga0210393_108700162	3300021401	Soil	DYRRGDILVDIAAPLAVGVFLGSLLGARVAPRIRTKYVVYLLVAIMLYLAGHLTVHLFKGGSA
Ga0210387_104413523	3300021405	Soil	APLSIGVFVGSLLGARLAPRIRTQYVIYLLVAIMLYLALHLMVHLHAGAN
Ga0210386_116508131	3300021406	Soil	ILVQYAAPLAVGVFLGSLLGARVAPRINRKVVVYLLVGVMLYLAAHLTFHLLRGIL
Ga0210391_102732203	3300021433	Soil	GVFLGSLLGARMAPRIQTKYVVYLLVAIMLYLAGHLIVHLLRGGAA
Ga0210391_104310261	3300021433	Soil	AVGVFLGSLLGARVAPRIRTKYVIYLLVAIMLYLAVHLTVHLLTGGSPA
Ga0210390_115913671	3300021474	Soil	QYAAPLAVGVFLGSLLGARVAPRINRKVVVYLLVGVMLYLAAHLTFHLLRGIL
Ga0210398_114963481	3300021477	Soil	RRGDILVQVAAPLAVGVFVGSLLGARTAPRINTKVVVYLLVGVMIYLAGHLILHLLWGWL
Ga0210410_104007411	3300021479	Soil	PLAVGVFLGSLLGARLASRIDTRIVMYLLVAVMLYLAGHLVVHLLQGGL
Ga0126371_119607123	3300021560	Tropical Forest Soil	DIQAEIAAPLAVGVFLGSLLGARLAPRVHTKIVVYLLVTVMLYLAVHLTIHWLRGIM
Ga0212123_101643511	3300022557	Iron-Sulfur Acid Spring	VDIAAPLAVGVFVGSLLGARLAPRIHTKVVVYLLIGVMLYLGGHLAIHLLRGAL
Ga0224565_10161803	3300024176	Plant Litter	RRGDILVEIAAPLAVGVFLGSLLGARLAPRIRTQYVLYLIVGIMLYLAGHLFVHLLRGSA
Ga0207664_102012594	3300025929	Agricultural Soil	RRGDILVQYAAPLAVGVFMGSLLGARMAPRIHTKVVVYLLVAVMLYLAGHLIFHLLRVAL
Ga0207644_109275103	3300025931	Switchgrass Rhizosphere	VGVFAGSLLGARLAPRVHAKYVIYLLVVVMFYLSGNMLVHFYREFLR
Ga0179587_110131212	3300026557	Vadose Zone Soil	VFLGSLLGARMAPRIQAKYVVYLLVAIMLYLAAHLIVHLLRTGRA
Ga0208237_10381011	3300027080	Forest Soil	TLAAPLAVGVFAGSLLGARLAPRIRTKYVVYLLVAIMLYLAGHLIFHLLKGGAA
Ga0209222_10906063	3300027559	Forest Soil	APLAVGVFLGSLLGARLAPRIHTKYVVYLLVAIMLYLAVHLIVHLLRGGAA
Ga0209333_11721262	3300027676	Forest Soil	PLAVGVFVGSLLGARMAPRINTKVVVYLLVGVMLYLAGHLIIHLLRGRL
Ga0209910_100070532	3300027803	Thawing Permafrost	VFLGSLLGARLAPRIKTKYVIYLLVAIMFYLAGHLIVHLLRGGVA
Ga0209579_100644234	3300027869	Surface Soil	APLAVGVFVGSLMGARLAPRIHTKVVVYLLVGVMFYLAGHLIVHLLQVWL
Ga0209275_102957733	3300027884	Soil	PLAVGVFLGSLLGARVAPRIRTKYVVYLLVAIMLYLAGHLTVDLFKGGSA
Ga0209067_104150543	3300027898	Watersheds	APLAVGVFLGSLLGARLAPRIHTRIVVYLLVAVMLYLAGHLAFHLLQGAL
Ga0209488_103884813	3300027903	Vadose Zone Soil	VQYAAPMSVGVFMGSLLGARLAPRVHTKVVVYLLVGVMLYLAGHLSIHLLWGLL
Ga0209006_102644351	3300027908	Forest Soil	ILVDIAAPLAVGVFLGSLLGARVAPRIRTKYVVYLLVAIMLYLAGHLTVHLFKGGSA
Ga0265336_100648603	3300028666	Rhizosphere	GVFVGSLLGARLAPRVHNKVVVYLLVGVMFYLAGHLIVHLLRGWL
Ga0302224_103143422	3300028759	Palsa	VGVFVGSLLGARLAPRIRTKFIVYLLVAVMFYLAGHLGIHLLRELL
Ga0302303_102967061	3300028776	Palsa	EIAAPLAVGVFLGSLLGARLAPRIQTKYVIYLLVAIMLYLAVHLVVHLLTGVPA
Ga0302225_106016471	3300028780	Palsa	AAPLAVGVFLGSLLGARLAPRVQTKYVVYLLVAIMLYLAGHMIMHLLAGGAA
Ga0311339_102535851	3300029999	Palsa	ILVEVAAPLAVGVFLGSLLGARVAPRINTRHLAYLLVAIMLYLAGSLLVHLFRGGLA
Ga0302282_13586231	3300030045	Fen	ILVEIAAPLSVGVFLGSLLGARLAPRIQTKYVVYLLVGIMLYLAGHLAVHLFTGGSA
Ga0302179_104992711	3300030058	Palsa	PLAVGVFVGSLLGARLAPRIRTKFIVYLLVAVMFYLAGHLGIHLLRELL
Ga0302183_101591243	3300030509	Palsa	DILVELAAPLAVGVFLGSLLGARMAPRIHTKVVVYLLVGVMFYLAGHLILHLMQGWL
Ga0302183_104307421	3300030509	Palsa	QIAAPLAVGVFLGSLLGARLAPRIRTKFVVYLLVAIMLYLAGHLLVHLASGGAA
Ga0265762_11230312	3300030760	Soil	AAPLAVGVFLGSLLGARAAPRIRTRYVVYLLVAIMLYLAGHLIVHVFQHLHGGAA
Ga0265760_102222663	3300031090	Soil	AAPLAVGVFVGSLLGARMAPRINTKVVVYLLVGVMLYLAGHLIIHLLRGRL
Ga0170824_1076355191	3300031231	Forest Soil	LAVGVFLGSLLGARLAPRIHTKVVMYLLVGVMFYLAGRLIVHLLQGWL
Ga0170824_1094199612	3300031231	Forest Soil	PLAVGVFVGSLLGARLAPRIHTKVVVYLLVGVMFYLAGHLAIHLAKELL
Ga0170824_1287479513	3300031231	Forest Soil	LVQLAAPLAVGVFLGSLLGARLAPRIHTKVVVYLLVGVMFYLAGHLIVHLLQGWL
Ga0265328_102735041	3300031239	Rhizosphere	AVGVFVGSLLGARLAPRVHNKVVVYLLVGVMFYLAGHLIVHLLQGWL
Ga0302318_104518801	3300031258	Bog	LAVGVFLGSLLGARLAPRIQTKYVVYLLVGIMLYLAVHLGVHLFSGGAA
Ga0170820_127326513	3300031446	Forest Soil	VFVGSLVGARLAPRVHTKVVVYLLVGIMFYLAVHLIVHLLRGWL
Ga0170818_1151644942	3300031474	Forest Soil	LAVGVFVGSLLGARMAPRIHTKIVVYLLVGVMFYLAGHLLIHLLRGWL
Ga0310686_1187097713	3300031708	Soil	VFVGSLIGARLAPRIHTKVVVYLLVGVMFYLAGHLIVHLLQGWL
Ga0307476_109672891	3300031715	Hardwood Forest Soil	PLAVGVFLGSLLGARLAPRIHTKYVVYLLVAIMLYLAGHLFVHLLTGKSA
Ga0307475_112187343	3300031754	Hardwood Forest Soil	QIAAPLAVGVFLGSLLGARLAPRIDTRIVMYLLVAVMLYLAGHLVVHLLQGGL
Ga0308174_102487323	3300031939	Soil	RRGDILVEVAAPLAVGVFLGSLLGARLSPRIHKKVVVYLLVGVMFYLAGHLLLHLAQVHL
Ga0335079_107530611	3300032783	Soil	PLAVGVFVGSVLGAHWAPRVHSRIVVYLLVAVMLYLAGHLGFHLLLGIL
Ga0335079_114985741	3300032783	Soil	RRGDILVQVAAPLAAGVFVGSLLGARLAPRIHSRIVIYLLVAVMLYLAGHLIFHLSRGLA
Ga0335081_120106631	3300032892	Soil	ILPEIAAPLAVGVFVGSLLGARLAPRVHTKIVMYLLVGVMFYLAGNLAFHLLQGKL
Ga0335071_104095671	3300032897	Soil	DIQVEIAAPLAVGVFLGSLLGARLAPRVHHRVVVYLLVAVMLYLAVHLGVHLLREVL
Ga0326726_114679331	3300033433	Peat Soil	DIQPEIAAPLAVGVFIGSLLGARLAPRVHTRIVVYLLVGIMLYLSLHLTLHLLRGVL
Ga0370483_0285318_413_568	3300034124	Untreated Peat Soil	APLAVGVFLGSLLGARMAPRIQTKYVVYLLVGIMLYLAGHMIVHLFAGGAA
Ga0370515_0213940_3_155	3300034163	Untreated Peat Soil	PLAVGVFLGSLLGARLAPRIQTKYVIYLLVAIMLYLAGHLLLHLLKGGAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075261

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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