NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075252

Metagenome / Metatranscriptome Family F075252

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075252
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 82 residues
Representative Sequence VLFLRRGLPGSVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPL
Number of Associated Samples 94
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.58 %
% of genes near scaffold ends (potentially truncated) 97.48 %
% of genes from short scaffolds (< 2000 bps) 86.55 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.479 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(23.529 % of family members)
Environment Ontology (ENVO) Unclassified
(39.496 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.496 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 63.30%    β-sheet: 0.00%    Coil/Unstructured: 36.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF03404Mo-co_dimer 73.11
PF07681DoxX 3.36
PF03239FTR1 1.68
PF00149Metallophos 1.68
PF00140Sigma70_r1_2 1.68
PF10517DM13 0.84
PF07992Pyr_redox_2 0.84
PF07690MFS_1 0.84
PF00296Bac_luciferase 0.84
PF13473Cupredoxin_1 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 3.36
COG4270Uncharacterized membrane proteinFunction unknown [S] 3.36
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 1.68
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.84

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.48 %
UnclassifiedrootN/A2.52 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459003|FZ032L002F4PH0All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium569Open in IMG/M
3300000955|JGI1027J12803_100830310All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300002914|JGI25617J43924_10251928All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300004463|Ga0063356_100820436All Organisms → cellular organisms → Bacteria1301Open in IMG/M
3300004463|Ga0063356_100921239All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1237Open in IMG/M
3300004463|Ga0063356_104622992All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300004643|Ga0062591_100742930All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300005187|Ga0066675_10140680All Organisms → cellular organisms → Bacteria1646Open in IMG/M
3300005330|Ga0070690_100805638All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300005333|Ga0070677_10581962All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300005446|Ga0066686_10742364All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005468|Ga0070707_100461806All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1231Open in IMG/M
3300005545|Ga0070695_100669668All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300005546|Ga0070696_100388826All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300005553|Ga0066695_10583446All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300005554|Ga0066661_10346899All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300005557|Ga0066704_10367893All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300005559|Ga0066700_10127532All Organisms → cellular organisms → Bacteria1699Open in IMG/M
3300005598|Ga0066706_10038828All Organisms → cellular organisms → Bacteria3123Open in IMG/M
3300005617|Ga0068859_103058418All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300005719|Ga0068861_100483503All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300005842|Ga0068858_100700860All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300006028|Ga0070717_10513152All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300006173|Ga0070716_100184601All Organisms → cellular organisms → Bacteria1372Open in IMG/M
3300006173|Ga0070716_101229903All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300006755|Ga0079222_11900049All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia581Open in IMG/M
3300006791|Ga0066653_10347165All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300006800|Ga0066660_10904229All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300007265|Ga0099794_10190735All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1048Open in IMG/M
3300007788|Ga0099795_10235162All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium785Open in IMG/M
3300010048|Ga0126373_12917063All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300012200|Ga0137382_10221819All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1304Open in IMG/M
3300012208|Ga0137376_11138185All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia667Open in IMG/M
3300012208|Ga0137376_11409892All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium587Open in IMG/M
3300012210|Ga0137378_10191459All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1903Open in IMG/M
3300012211|Ga0137377_11565292All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia584Open in IMG/M
3300012285|Ga0137370_10184752All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300012361|Ga0137360_11147533All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium672Open in IMG/M
3300012361|Ga0137360_11297986All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium629Open in IMG/M
3300012362|Ga0137361_10231512All Organisms → cellular organisms → Bacteria1679Open in IMG/M
3300012362|Ga0137361_10463889All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1163Open in IMG/M
3300012362|Ga0137361_10527182All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300012362|Ga0137361_10988184All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia761Open in IMG/M
3300012362|Ga0137361_11456367All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia607Open in IMG/M
3300012582|Ga0137358_10476703All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300012582|Ga0137358_10735437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia659Open in IMG/M
3300012683|Ga0137398_10157150All Organisms → cellular organisms → Bacteria1479Open in IMG/M
3300012923|Ga0137359_10567352All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300012923|Ga0137359_10733737All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia859Open in IMG/M
3300012925|Ga0137419_10279353All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1269Open in IMG/M
3300012929|Ga0137404_10500378All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300012930|Ga0137407_10168956All Organisms → cellular organisms → Bacteria1945Open in IMG/M
3300012930|Ga0137407_10526592All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300012951|Ga0164300_10030678All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1970Open in IMG/M
3300012985|Ga0164308_10431831All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1085Open in IMG/M
3300015195|Ga0167658_1044784All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300018431|Ga0066655_10029078All Organisms → cellular organisms → Bacteria2672Open in IMG/M
3300018468|Ga0066662_11740880All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300019865|Ga0193748_1000897All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1755Open in IMG/M
3300019872|Ga0193754_1007023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1136Open in IMG/M
3300019881|Ga0193707_1022313All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2093Open in IMG/M
3300019881|Ga0193707_1196282All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300019887|Ga0193729_1035497All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2083Open in IMG/M
3300019888|Ga0193751_1020508All Organisms → cellular organisms → Bacteria3265Open in IMG/M
3300019996|Ga0193693_1011728All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1747Open in IMG/M
3300020006|Ga0193735_1048950All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1259Open in IMG/M
3300020012|Ga0193732_1022521All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1091Open in IMG/M
3300020018|Ga0193721_1144640All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium578Open in IMG/M
3300020140|Ga0179590_1214810All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium527Open in IMG/M
3300021405|Ga0210387_11671319All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium540Open in IMG/M
3300021413|Ga0193750_1006803All Organisms → cellular organisms → Bacteria2967Open in IMG/M
3300021418|Ga0193695_1003748All Organisms → cellular organisms → Bacteria2798Open in IMG/M
3300021475|Ga0210392_10422425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia974Open in IMG/M
3300024330|Ga0137417_1105784All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1001Open in IMG/M
3300024330|Ga0137417_1250630All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1107Open in IMG/M
3300025903|Ga0207680_10657909All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia750Open in IMG/M
3300025910|Ga0207684_10223398All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1625Open in IMG/M
3300025915|Ga0207693_11013362All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300025929|Ga0207664_10096233All Organisms → cellular organisms → Bacteria2436Open in IMG/M
3300025972|Ga0207668_11107245All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia710Open in IMG/M
3300026309|Ga0209055_1285249All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300026315|Ga0209686_1218967All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium516Open in IMG/M
3300026324|Ga0209470_1038132All Organisms → cellular organisms → Bacteria2400Open in IMG/M
3300026324|Ga0209470_1350134All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium530Open in IMG/M
3300026334|Ga0209377_1161959All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium828Open in IMG/M
3300026361|Ga0257176_1070790All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia563Open in IMG/M
3300026377|Ga0257171_1005225All Organisms → cellular organisms → Bacteria2032Open in IMG/M
3300026514|Ga0257168_1118217All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300026540|Ga0209376_1090885All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium1592Open in IMG/M
3300026547|Ga0209156_10053839All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2125Open in IMG/M
3300026547|Ga0209156_10214529All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia912Open in IMG/M
3300026551|Ga0209648_10121602All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2105Open in IMG/M
3300027748|Ga0209689_1029434All Organisms → cellular organisms → Bacteria3286Open in IMG/M
3300027748|Ga0209689_1086500All Organisms → cellular organisms → Bacteria1647Open in IMG/M
3300027748|Ga0209689_1087642All Organisms → cellular organisms → Bacteria1634Open in IMG/M
3300027787|Ga0209074_10523462All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia518Open in IMG/M
3300028828|Ga0307312_10109377Not Available1721Open in IMG/M
3300030945|Ga0075373_10801465All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia768Open in IMG/M
3300030945|Ga0075373_11532952All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia567Open in IMG/M
3300031057|Ga0170834_105274258All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1518Open in IMG/M
3300031057|Ga0170834_106946914All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2136Open in IMG/M
3300031122|Ga0170822_10544846All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia945Open in IMG/M
3300031128|Ga0170823_11560624All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1443Open in IMG/M
3300031152|Ga0307501_10204643All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium566Open in IMG/M
3300031231|Ga0170824_114273023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia744Open in IMG/M
3300031231|Ga0170824_114279054All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia744Open in IMG/M
3300031474|Ga0170818_103082840All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1164Open in IMG/M
3300031474|Ga0170818_104375873All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1044Open in IMG/M
3300031912|Ga0306921_10724489All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300031942|Ga0310916_11435458All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia564Open in IMG/M
3300031946|Ga0310910_10461711All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1008Open in IMG/M
3300032001|Ga0306922_11345526All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300032001|Ga0306922_12415215All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium501Open in IMG/M
3300032042|Ga0318545_10150305All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia828Open in IMG/M
3300032180|Ga0307471_101439025All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300032180|Ga0307471_104276314All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300032205|Ga0307472_101866043All Organisms → cellular organisms → Bacteria599Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil23.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.40%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil6.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.52%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.52%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.52%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.84%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.84%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459003Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019865Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1EnvironmentalOpen in IMG/M
3300019872Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300019996Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021413Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030945Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_024976602170459003Grass SoilVLFLRRGLPGLVCGLFGGTLLVSGFGNLSLGLAVGAILGTAYTFALPHPIDRDGAAADRAMTAAAFGLPMWG
JGI1027J12803_10083031013300000955SoilMLATIFSTIALLILRRALSGFTCGLLCGIFLARGFRSISIGLAVGAALGTVYALALPRPTRDAGAAADRAMTTAAFGLPIWGALNVILLPLLAGQ
JGI25617J43924_1008531623300002914Grasslands SoilVPILRRALPGFTCGLLCGILLAGGFGSISLGLVVGAVLGTAYALALPLPTRDAGAAADRAMTAAAF
JGI25617J43924_1025192823300002914Grasslands SoilVPILRRALPGFICGVLSGILLAGGFSSISLGLAVGAVLGTAYALALPRPTRDGGAAADRAMTAAVFGLPTWGA
Ga0063356_10082043633300004463Arabidopsis Thaliana RhizosphereVRILRRALPGFACGLLCGILLVGGFGSISLGLAVGAVLGTAYTLALPLPTGDAGAAADRAMTAAAFGLPIWGALNVILLPLLAGQMPQWTAEGMRGLFPALVGWL
Ga0063356_10092123913300004463Arabidopsis Thaliana RhizosphereVLFLRRGLPGLICGLFGGTLLVGGFGNLSLGLAVGAILGTAYTLALPHPIDWDGAAADRAMTA
Ga0063356_10462299213300004463Arabidopsis Thaliana RhizosphereVPILRRAGPGFTCGLLCGFLLAGGFGSISLGLAVGAVLGTAYALALPRSVREGGAAVDRAMTTAVFGLPIWGALNVVLLPLLAGQTPQWTAEGMRGLFPALVGWL
Ga0062591_10074293023300004643SoilVPILRRALPGFTCGLLCGIFLARGFGNISIGLAMGAVLGTVYALALPRLTRDAGAAADRAMTTAAFGLPIWGALNVILLPLLAGQTPQWTAEGMRGLFPALVGWLLFGF
Ga0066675_1014068023300005187SoilVPILRRALPGFTCGVLCGILLARGFGSISIGLAVGAVLGTAYALALPRPTRDAGAAADRGMTTAAFGLAIWGALNVVLLPLLAGQTPQWTAEGMRGLF
Ga0070690_10080563823300005330Switchgrass RhizosphereVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLP
Ga0070677_1058196223300005333Miscanthus RhizosphereMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQTPQWTAEGMRGLFPALVG
Ga0066686_1074236423300005446SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFAGQTPQWTAEGMR
Ga0070707_10046180613300005468Corn, Switchgrass And Miscanthus RhizosphereVFLRRALPGFVCGLVCGTLLVGGLGELSLGLLIGAALGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVI
Ga0070695_10066966823300005545Corn, Switchgrass And Miscanthus RhizosphereVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMW
Ga0070696_10038882623300005546Corn, Switchgrass And Miscanthus RhizosphereVPFLRRALPGFVCGLLCGILLAGAFGNVSLGLAVGAVLGTAYALALPRPIGGQGAAADRAMTAAAFGLPIWGSLNVIL
Ga0066695_1058344623300005553SoilVPILRRALPGFTCGVLCGILLVGGFGSISLGLAVGGVLGTAYAFALPRPTRDAGVAADRAMTTAAFGLPIWGALNVVLLPLLAG
Ga0066661_1034689933300005554SoilVLFLRRGLPGLVCGLFGGTLLVGGFGDLSLGLAAGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFAGQTPQWTAEGMRMLFPAL
Ga0066704_1036789313300005557SoilVPILRRALPGFTCGLLCGILLVGGFGNISLGLAVGAVLGTAYALALPLPTRDAGAAADRAMTAAAFGLPIWGALNVILLPLLAGQMPQWTAEGMRGLFPALV
Ga0066700_1012753213300005559SoilVLFLRRGLPGSVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVI
Ga0066706_1003882813300005598SoilVPILRRALPGFTCGVLCGILLARGFGSISIGLAVGAVLGTAYALALPRPTRDAGAAADRGMTTAAFGLAIWGALNVVLLPLLAGQTPQWTAEG
Ga0068859_10305841823300005617Switchgrass RhizosphereVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILL
Ga0068861_10048350313300005719Switchgrass RhizosphereVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPM
Ga0068858_10070086023300005842Switchgrass RhizosphereVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAF
Ga0070717_1051315223300006028Corn, Switchgrass And Miscanthus RhizosphereVAILRRVLPGFACGVLCGILLAGGFCSISIGLAVGAVLGMAYAFALPRPIGDHGAAADRAMTAAAFGLLFWGALNVILLPLLAGQMPQWTAEGMRGLFP
Ga0070716_10018460123300006173Corn, Switchgrass And Miscanthus RhizosphereVPFLRRALPGFVCGLLCGILLAGAFGNVSLGLAVGAVLGTAYALALPRPIGGQGAAADRAMTAAAFGLPIWGSLNVILLPLLAG
Ga0070716_10122990323300006173Corn, Switchgrass And Miscanthus RhizosphereVPILRRALPGFTCGLLCGILLVGGFGNISLGLAVGAMLGTAYALALPLPTRDAGAAADRAMTAAAFGLPIWGALNVILLPLLAGQMPQWTAEGMRGLFP
Ga0079222_1190004913300006755Agricultural SoilMLLVRRALPGFLCGVLCGTLLTPAVSNHSLGLALGAILGTLYAMALPRPIGGDGATADRAMTAAAFGLPMWGACNV
Ga0066653_1034716513300006791SoilVLFLRREFPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFARQTPQWTAEGMRTLFPALV
Ga0066660_1090422913300006800SoilVPILRRALPGFTCGLLCGILLVGGFGNISLGLAVGAVLGTAYALALPLPTRDAGAAADRAMTAAAFGLPIWGAVNVI
Ga0099794_1019073513300007265Vadose Zone SoilVLFFLRRGLPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPLWGAIN
Ga0099795_1023516213300007788Vadose Zone SoilVLFLRRGLPGSVCGLFGGILLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWG
Ga0126373_1291706313300010048Tropical Forest SoilVPWFTCGLLSGIFLVRGFGNISLGLGVGAVLGTAYALALPLPTRDVGAAADRAMTAAAFGLPIWGAVNVILLPLLAGQTPRWTAEGM
Ga0137382_1022181923300012200Vadose Zone SoilMLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFAGQTPQWTAEGMRMLFPAL
Ga0137363_1017438713300012202Vadose Zone SoilVLFAWRGLPGLVCGLVCGTLLGGGFGNVSLGFAVGGVLGLAYALALPRPLGGKGAAADRA
Ga0137376_1113818513300012208Vadose Zone SoilVPILRRALPGFTCGVLCGVVLAGGFGSISTGLAVGAVLGTAYALALPRPNRDAGAAADRAMTTAAFGLPIWGALNVVLLPLL
Ga0137376_1140989223300012208Vadose Zone SoilVLFLRRGLPGLVCGLFGGTLLVDGFGNLWLGLAVGATLGTAYTFALPHPIGLDGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQTPQWTAEGMRMLFPALV
Ga0137378_1019145913300012210Vadose Zone SoilLPGFICGVLCGIVLAGGFGSISVGLAVGAVLGTAYAVALPRPIRDAGVAADRAMTIAAFGLPIWGVLNVVLLPL
Ga0137377_1156529213300012211Vadose Zone SoilVLFLRRGFPGLVCGLFGGTLLVDGFGNLSLGLAVGAILGTAYTFALPHLIGRDGAAADRAMTAAAFGLPMWG
Ga0137370_1018475223300012285Vadose Zone SoilVPILRRALPGFTCGVLCGIVLAGGFGSISIGLAVGAVLGTAYALALPRPTRDAGAAADRAMTTAAFGLPIWGALNVVLLPLLAGQMPQWTAEGMRGLFPALVGWLLFGF
Ga0137360_1114753313300012361Vadose Zone SoilVLFLRRGLPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPLWGAINVILLPLF
Ga0137360_1129798613300012361Vadose Zone SoilVLFLRRGLPGLVCGLFGGTLLVGGFGDLSLGLAAGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPM
Ga0137361_1023151243300012362Vadose Zone SoilVLFLRRGLPGSVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAI
Ga0137361_1046388923300012362Vadose Zone SoilVLFLRRGLPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPLWGAINVILLPLFSGQTPQWTAEGM
Ga0137361_1052718213300012362Vadose Zone SoilMLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLP
Ga0137361_1098818423300012362Vadose Zone SoilVLFAWRGLPGLVCGLVCGTLLGGGFGNVSLGFAVGGVLGLAYALALPRPLGGKGAAADRAMAAAAF
Ga0137361_1145636723300012362Vadose Zone SoilMLFLRRGFPGLVCGLFGGTLLVGGLGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTA
Ga0137358_1047670313300012582Vadose Zone SoilVLFLRRGLPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPLWGAINVILLPL
Ga0137358_1073543713300012582Vadose Zone SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLP
Ga0137398_1015715043300012683Vadose Zone SoilVLFLRRGLPGSVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHQIGRDGAAADRAMTAAAFGLPMWGAINV
Ga0137359_1056735233300012923Vadose Zone SoilVLFLRRGLPGSVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPL
Ga0137359_1073373723300012923Vadose Zone SoilMLFLRRGFPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTA
Ga0137419_1027935313300012925Vadose Zone SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPISRDGTAADRAMTAAAFGLPM
Ga0137404_1050037813300012929Vadose Zone SoilVLFLRRGLPGLVCGLFGGTLLVGGFGNLSLGLVIGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLP
Ga0137407_1016895653300012930Vadose Zone SoilVLFLRRGLPGLVCGLFGGTLLVGGFGDLSLGLAAGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFAG
Ga0137407_1052659233300012930Vadose Zone SoilVLFLRRGLPGSVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFAG
Ga0164300_1003067813300012951SoilVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPLWGAVNVILLP
Ga0164308_1043183113300012985SoilVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLTGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAINVILLPLFAGQTPQWTAE
Ga0167658_104478423300015195Glacier Forefield SoilVLLRRGLPGLVCGLVCGTLLAGGFGNLLLGLAAGAILGIAYAFALPRPLGRNGAVADRAMTAAAFGLPMWGAINVILLPLFAGQMPLWTAEGMRA*
Ga0066655_1002907833300018431Grasslands SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAF
Ga0066662_1174088013300018468Grasslands SoilVPILRRALPGFTCGLLCGILLVGGFGNISLGLVVGAVLGTAYALALPLPTRDAGAAADRAMTAAAFGLPIWGAVNVILLPLLAGQTPHWTAEGMRG
Ga0193748_100089723300019865SoilVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFG
Ga0193754_100702323300019872SoilVFLRRALPGFVCGMVCGTLLAGGLGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAA
Ga0193707_102231333300019881SoilVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVIL
Ga0193707_119628223300019881SoilVLFLRRGLPGLVCGLFGGTLLVGGFGDLSLGLAAGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFAGQTPQWTAEGMR
Ga0193729_103549723300019887SoilVFLRRALPGLVCGLVCGTLLAGGLGDLSLGLLIGAVLGTAYALALPRPIGGDGGAADRAMTAAAFGLPMWGAVNVILLPLFAGQTPQWTA
Ga0193751_102050813300019888SoilVFLRRGFPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGIAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILL
Ga0193693_101172823300019996SoilVFLRRALPGFVCGTVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVIL
Ga0193735_104895023300020006SoilVFLRRALPGLVCGLVCGTLLAGGLGDLSLGLLIGAVLGTAYALALPRPIGGDGGAADRAMTAAAFGLPMWGAVNVILLPLFAGQT
Ga0193732_102252123300020012SoilVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQTPQWTAEGM
Ga0193721_114464013300020018SoilVFLRRALPGLVCGLVCGTLLAGGLGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQTPQWTAEGMRG
Ga0179590_121481013300020140Vadose Zone SoilMLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLP
Ga0210387_1167131923300021405SoilVPILRRALPGFICGVLCGISLAGGFGSISIGLAVGAVLGTAYALALPRPTRDAGAAADRAMTAAAFGLPIWGALNVILLPLLTGQTPHWT
Ga0193750_100680343300021413SoilVLFFLRRGLPGLVCGLFGGTLLVGGFGNLSLGLAVGAVLGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFAGQ
Ga0193695_100374843300021418SoilVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLF
Ga0210392_1042242523300021475SoilVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAINVIQIG
Ga0137417_110578423300024330Vadose Zone SoilMLFLRRGFPGLVCGLFGGTLLVGGLGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFAGQTP
Ga0137417_125063013300024330Vadose Zone SoilMLFLRRGFPGLVCGLFGGTLLVGGLGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPLWGAINVILLPLFS
Ga0207680_1065790913300025903Switchgrass RhizosphereVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQ
Ga0207684_1022339833300025910Corn, Switchgrass And Miscanthus RhizosphereVPILRRALPGFTCGLLCGILLAGGFGSISLGLAVGAVLGTAYALALPLPTSDAGAAADRAMTAATFGLPIWGALNVILLPLLA
Ga0207693_1101336223300025915Corn, Switchgrass And Miscanthus RhizosphereVPFLRRALPGFVCGLLCGILLAGAFGNVSLGLAVGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPIWG
Ga0207664_1009623333300025929Agricultural SoilVPILRRVLPGFACGVLCGILLAGGFGSISIGLAVGAVLGMAYALALPRPIGDHGAAADRAMTAAAFGLLFWGALNVILLPLLAGQMPQWTAEGMRGLFPTLI
Ga0207668_1110724513300025972Switchgrass RhizosphereVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQTPQWTAE
Ga0209055_128524913300026309SoilVPILRRALPGFTCGLLCGILLVGGFGNISLGLVVGAVLGTAYALALPLPTRDAGAAADRAMTAAAFGLPIWGAVNVILLPLLAGQTPHWTA
Ga0209686_121896723300026315SoilVLFLRRGLPGLVCGLFGGTLLLDGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILL
Ga0209470_103813213300026324SoilVPILRRALPGFTCGVLCGTLLAGGFGISLGLAIGAVLGTAYALALPRLTGDAGAAADRAMTTAAFGLPIWGAVNVVLLPL
Ga0209470_135013413300026324SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLVVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFA
Ga0209377_116195923300026334SoilVPILRRALPGFTCGLLCGILLVGGFGNISLGLAVGAVLGTAYALALPLPTRDAGAAADRAMTAAAFGLPIWGAVNVILLPLLAGQTPHWTAEGMRGLFPALV
Ga0257176_107079023300026361SoilMLFLRRGFPGLVCGLFGGTLLVGGLGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLP
Ga0257171_100522513300026377SoilVPILRRALPGFTCGLLCGILLAGGFGNISLGLAVGAVLGTVYALALPRPTRDAGAAADRAMTAATFGLPIWGALNVILLPLLAGQAPQWT
Ga0257168_111821723300026514SoilVPILRRALPGFTCGLLCGILLARGFGNISIGLAVGAVLGTVYALALPRPTRDAGAAADRAMTAAAFGLPIWGALNVILLPLLAGQMPQW
Ga0209376_109088533300026540SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAIN
Ga0209156_1005383943300026547SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLVVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAIN
Ga0209156_1021452923300026547SoilVLFLRRGFPGLVCGLFCGTLLVGGFGNLSLGLTIGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAIN
Ga0209648_1012160213300026551Grasslands SoilVPILRRALPGFICGVLSGILLAGGFSSISLGLAVGAVLGTAYALALPRPTRDGGAAADRAMTAAVFGLPTWGALNVV
Ga0209689_102943443300027748SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLWLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINV
Ga0209689_108650043300027748SoilVLFLRRGLPGLVCGLFGGTLLVGGFGDLSLGLAAGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPL
Ga0209689_108764243300027748SoilVLFLRRGLPGSVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPQPIGRDGAAADRAMTAAAFGLPMWGAINVILLPL
Ga0209074_1052346223300027787Agricultural SoilMLLVRRALPGFLCGVLCGTLLTPAVSNHSLGLALGAILGTLYAMALPRPIGGDGATADRAMTAAAFGLPMWGAC
Ga0307312_1010937713300028828SoilVLFLRRGFPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAF
Ga0075373_1080146513300030945SoilVLFLRRGLPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAA
Ga0075373_1153295223300030945SoilVPILRRAGLGFTCGLLCGILLAGGFGSISLGLAVGAVLGTAYALALPRPTRDPGTAADRAMTTAAFGLPIWGALNVVLLP
Ga0170834_10527425813300031057Forest SoilVPILRRALPGFACGLLCGILLAGGFGSISLGLAVGAVLGTAYALALPRSAREGGAAVDRAMTTAAFGLPIWGAL
Ga0170834_10694691423300031057Forest SoilVFLRRALPGFVCGMVCGTLLAGALGDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQT
Ga0170822_1054484623300031122Forest SoilVPILRRALPGFACGVLCGVLLAGGFGSISLGLAVGAVLGTAYALALPRSAREGGVAVDRAMTTAAFGLPIWGALNVVLLPLLARQTPRWTA
Ga0170823_1156062413300031128Forest SoilVFLRRALPGFVCGMVCGTLLAGALSDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQT
Ga0307501_1020464323300031152SoilVLFLRRGLPGLVCGLFGGTLLVGGFGNLSLGLAVGAILGTAYTFALPHPIGRDGAAADRAMTAAAFGLPMWGAINVILLPLFASQ
Ga0170824_11427302323300031231Forest SoilVFLRRALPGFVCGMVCGTLLAGALGDLWLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQTPQWTAEG
Ga0170824_11427905423300031231Forest SoilVFLRRALPGFVCGMVCGTLLAGALSDLSLGLLIGAVLGTAYALALPRPIGGEGAAADRAMTAAAFGLPMWGAVNVILLPLFAGQTPQWTAEG
Ga0170818_10308284023300031474Forest SoilVPILRRALPGFTCGVLCGILLAGGFGSISIGLAVGAVLGTAYALALPRPTRDAGAAADRAMTTAAFGLPIWGALNVVLLPLLAGGTPQW
Ga0170818_10437587313300031474Forest SoilVPILRRALPGFACGLLCGILLARGFGSISLGLAVGAVLGTASALALPRPTRDPGAAADRAMTTAAFGLPIWGALNVVLLP
Ga0306921_1072448913300031912SoilMLATIFSTIALLILRRALPGFTCGLLCGIFLARGFGSISIGLALGAALGTVYALALPRPTRDAGAAADRAMTTAVFGLPIWGA
Ga0310916_1143545823300031942SoilMLLMRRALPGFLCGVFCGTLLTPAVGNHSLGLAFGAILGTLYAMALPRPIGGDGATADRAMTAAAFGLPMWGACNVILV
Ga0310910_1046171113300031946SoilMLLMRRALPGFLCGVFCGTLLTPAVGNHSLGLAFGAILGTLYAMALPRPIGGDGATADRAMTAAAFGLPMWGACN
Ga0306922_1134552623300032001SoilVRILRRALPGFACGLLCGILLVGGFGNISLGLAVGAVLGTAYALALPLPTHDTGAAADRAMTAAAFGLPIWGAVNVILLPLLAGQTPQWTAEGMRGLFPALVGWLL
Ga0306922_1241521523300032001SoilMLLMRRALPGFLCGVFCGTLLTPAVGNHSLGLAFGAILGTLYAMALPRPIGGDGATADRAMTAAAFGLPMWGA
Ga0318545_1015030523300032042SoilMLLMRRALPGFLCGVFCGTLLTPAVGNHSLGLAFGAILGTLYAMALPRPIGGDGATADRAMTAAAFGLPMWGACNVILVPLFGGQMPQWSAE
Ga0307471_10143902533300032180Hardwood Forest SoilVPILRRALPGFTCGLLCGILLAGGFGSISLGLAVGAVLGTAYALALPLPTRDAGAAADLAMTAAAFGLLIWGALNVILLPLLA
Ga0307471_10427631413300032180Hardwood Forest SoilVPILRRALPGFACGVLCGILLERGFGSISLGLAVGAVLGTAYALALPRPTRDPGAAFDRAMTAAALGLPIWGALNVVLLPLLAGQTPQWTAEGMRRLFPALVG
Ga0307472_10186604323300032205Hardwood Forest SoilVPILRRVLPGFACGVLCGILLAGGFCSISIGLAVGAVLGMAYALALPRPIGDHGAAADRAMTAAAFGLLFWGALNVILLPLLAGQMPQWTAEGMRGLFPTLI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.