Metagenome / Metatranscriptome Family F075240

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075240
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	104 residues
Representative Sequence	VANDRELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHEAGRQSRELRELLAPLRKVVAKAA
Number of Associated Samples	107
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.04 %
% of genes near scaffold ends (potentially truncated)	26.05 %
% of genes from short scaffolds (< 2000 bps)	84.03 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.210 % of family members)
Environment Ontology (ENVO)	Unclassified (32.773 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.261 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.42% β-sheet: 0.00% Coil/Unstructured: 32.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.47.1.1: STAT	d1uura1	1uur	0.73583
a.47.1.1: STAT	d1bg1a1	1bg1	0.69776
a.2.14.1: DnaK suppressor protein DksA, alpha-hairpin domain	d1tjla1	1tjl	0.68628
a.2.5.1: Prefoldin	d1fxkc_	1fxk	0.67491
a.4.5.61: PadR-like	d1yg2a_	1yg2	0.67031

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00196	GerE	44.54
PF02113	Peptidase_S13	22.69
PF06725	3D	5.88
PF10647	Gmad1	0.84
PF00533	BRCT	0.84
PF12826	HHH_2	0.84
PF00501	AMP-binding	0.84
PF00877	NLPC_P60	0.84
PF01416	PseudoU_synth_1	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	22.69
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	0.84
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.35 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.35 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	68.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	67.23 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.84 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	67.23 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.68 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	67.23 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	67.23 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.68 %
Kribbella catacumbae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	0.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105119075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300000550\|F24TB_10787404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1427	Open in IMG/M
3300000956\|JGI10216J12902_108781413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	923	Open in IMG/M
3300001431\|F14TB_100021793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300004156\|Ga0062589_102506641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300004479\|Ga0062595_102597467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300004480\|Ga0062592_100671867	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300004480\|Ga0062592_100757779	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300004643\|Ga0062591_101469223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300005166\|Ga0066674_10015951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3186	Open in IMG/M
3300005168\|Ga0066809_10011418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1680	Open in IMG/M
3300005329\|Ga0070683_100011052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7782	Open in IMG/M
3300005332\|Ga0066388_100579439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1748	Open in IMG/M
3300005344\|Ga0070661_101014634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300005356\|Ga0070674_101831562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300005446\|Ga0066686_10157293	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300005457\|Ga0070662_101431679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300005535\|Ga0070684_100023715	All Organisms → cellular organisms → Bacteria	5137	Open in IMG/M
3300005558\|Ga0066698_10302965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1107	Open in IMG/M
3300005713\|Ga0066905_100000081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17272	Open in IMG/M
3300005713\|Ga0066905_100112663	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300005764\|Ga0066903_100402505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2253	Open in IMG/M
3300005983\|Ga0081540_1023390	All Organisms → cellular organisms → Bacteria	3615	Open in IMG/M
3300006046\|Ga0066652_101170852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300006173\|Ga0070716_100409218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300006577\|Ga0074050_11687336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300006579\|Ga0074054_10022103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300006604\|Ga0074060_12024321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300006605\|Ga0074057_10046987	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300006606\|Ga0074062_12936800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300006791\|Ga0066653_10103059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300006852\|Ga0075433_11161162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300006854\|Ga0075425_101127773	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300006871\|Ga0075434_102249277	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006881\|Ga0068865_100599358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300006904\|Ga0075424_101831924	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300009148\|Ga0105243_11171930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300009162\|Ga0075423_10220101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1990	Open in IMG/M
3300009162\|Ga0075423_12772136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300009553\|Ga0105249_12908246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300010043\|Ga0126380_10318226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1116	Open in IMG/M
3300010046\|Ga0126384_10976343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300010047\|Ga0126382_10318043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1177	Open in IMG/M
3300010304\|Ga0134088_10726351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300010322\|Ga0134084_10290444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300010329\|Ga0134111_10007983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3303	Open in IMG/M
3300010358\|Ga0126370_11074549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300010360\|Ga0126372_11216745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300010362\|Ga0126377_12254040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300011000\|Ga0138513_100080195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012198\|Ga0137364_10439232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300012200\|Ga0137382_10022794	All Organisms → cellular organisms → Bacteria	3627	Open in IMG/M
3300012200\|Ga0137382_10324654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1077	Open in IMG/M
3300012204\|Ga0137374_11283206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012208\|Ga0137376_10221875	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300012285\|Ga0137370_10032665	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300012355\|Ga0137369_10426904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	950	Open in IMG/M
3300012355\|Ga0137369_10491753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300012515\|Ga0157338_1024243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300012895\|Ga0157309_10367451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012930\|Ga0137407_12336891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300012948\|Ga0126375_10555970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300012958\|Ga0164299_10725466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300012960\|Ga0164301_11704235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300012961\|Ga0164302_10145302	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300012961\|Ga0164302_10425771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300012971\|Ga0126369_13430816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300012986\|Ga0164304_10241213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1206	Open in IMG/M
3300012989\|Ga0164305_11237432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300014157\|Ga0134078_10222569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300015371\|Ga0132258_10784171	All Organisms → cellular organisms → Bacteria	2402	Open in IMG/M
3300015371\|Ga0132258_12166354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1396	Open in IMG/M
3300015372\|Ga0132256_100062879	All Organisms → cellular organisms → Bacteria	3490	Open in IMG/M
3300015373\|Ga0132257_100632054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1325	Open in IMG/M
3300015374\|Ga0132255_100121124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3595	Open in IMG/M
3300017654\|Ga0134069_1058807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300018031\|Ga0184634_10057142	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300018053\|Ga0184626_10330524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300018054\|Ga0184621_10004458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3779	Open in IMG/M
3300018072\|Ga0184635_10097053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1164	Open in IMG/M
3300018072\|Ga0184635_10419687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300018081\|Ga0184625_10338884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300018081\|Ga0184625_10414913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300019875\|Ga0193701_1002501	All Organisms → cellular organisms → Bacteria	3295	Open in IMG/M
3300019876\|Ga0193703_1016882	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300019883\|Ga0193725_1149074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300020002\|Ga0193730_1013229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2350	Open in IMG/M
3300020005\|Ga0193697_1142751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300020016\|Ga0193696_1009929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2597	Open in IMG/M
3300021078\|Ga0210381_10028803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1544	Open in IMG/M
3300021078\|Ga0210381_10221176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	666	Open in IMG/M
3300022756\|Ga0222622_10392494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	975	Open in IMG/M
3300025916\|Ga0207663_10130489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1735	Open in IMG/M
3300025920\|Ga0207649_10460247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300025927\|Ga0207687_10760330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300025937\|Ga0207669_11626565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300025944\|Ga0207661_10029146	All Organisms → cellular organisms → Bacteria	4236	Open in IMG/M
3300025944\|Ga0207661_10068745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2885	Open in IMG/M
3300026306\|Ga0209468_1121890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300026324\|Ga0209470_1051568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1982	Open in IMG/M
3300027560\|Ga0207981_1009160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1759	Open in IMG/M
3300028712\|Ga0307285_10222827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300028718\|Ga0307307_10024226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1695	Open in IMG/M
3300028720\|Ga0307317_10251173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300028720\|Ga0307317_10292473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300028744\|Ga0307318_10102493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	969	Open in IMG/M
3300028778\|Ga0307288_10209346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300028802\|Ga0307503_10267269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300028803\|Ga0307281_10132300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300028810\|Ga0307294_10390554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300028819\|Ga0307296_10530532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300028875\|Ga0307289_10058459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1547	Open in IMG/M
3300028878\|Ga0307278_10059643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1722	Open in IMG/M
3300028884\|Ga0307308_10142602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1146	Open in IMG/M
3300028885\|Ga0307304_10350387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300031170\|Ga0307498_10207272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300031198\|Ga0307500_10061245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300031226\|Ga0307497_10015019	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300031740\|Ga0307468_101964622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.51%
Host-Associated	Host-Associated	18.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.11%
Plants	Host-Associated → Plants	18.49%
Aquatic	Environmental → Aquatic	8.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.61%
Sediment	Environmental → Aquatic → Sediment	6.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.88%
Freshwater	Environmental → Aquatic → Freshwater	1.68%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.18%
Loam	Environmental → Terrestrial → Soil → Loam	10.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.84%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1051190751	3300000364	Soil	VADDRELLERIQALTDAMAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA
F24TB_107874042	3300000550	Soil	VADDRELLGRIQALTDAMAEGPALPRSEMEPTVTDGYARALELDAECLRIERRIDELTHQTVVVGHDMPSGELSALLDRLQEATRLSTELRELLAPLRKIVAEAA*
JGI10216J12902_1087814132	3300000956	Soil	VADDRELLERIQALTDALAEGQTLPRSEMEPTVTDGYARALELDADCLRIEQRIDALTQDSVEGHRIPRGELSDLLRRFQEASRQSAELRALLAPLRKVVSRAAA*
F14TB_1000217932	3300001431	Soil	VADDRELLGRIQALTDAMAEGPALPRSEMEPTVTDGYARALELDAECLRIERRIDELTHQTVVVGHEMPSGELSALLDRLQEATRLSTELRELLAPLRKIVAEAA*
Ga0062589_1025066411	3300004156	Soil	MAEGQSLPRSEMEPIVTDGYARALELDAECLRIERRLDELGQYAVEGHAFQRGELSTLLVRFHDAHEQSRELRALLAPLRKLVSRAAA*
Ga0062595_1025974671	3300004479	Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELSALLKRLQEATRQSTELRELLAPLRKIVAEAA*
Ga0062592_1006718672	3300004480	Soil	VADDRELLERIQALTDAMAEGQVLPRSEMEPTVTDGYARALELDAECLRIERRIDELTEASVEGRTVARGEMAALLRRYQEATRQSAELRTLLAPLRKV
Ga0062592_1007577792	3300004480	Soil	VADDRELLERIQALTEAMAEGPAPPRKEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0062591_1014692232	3300004643	Soil	VADDRELLERIQALTDAMAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0066674_100159514	3300005166	Soil	VADDRELLERIQALADAMAEGPALPRSKMEPIVTEGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA*
Ga0066809_100114182	3300005168	Soil	VADDRDLLERIQALTAAVAEGQALPRDEVEPTVTDGYARALELDAECLRIERRIDELTHDTVVVGHDMPRGELSALLRRLQHATRQSTELRELLAPLRKLVAKAA*
Ga0070683_10001105210	3300005329	Corn Rhizosphere	VADDRELLERIQALADAMAEGQALPRSEMEPTVTDGYARALELDAECLRIERRIDAMTQDAVEGHSIERGEMSSLLERFQEASRQSAELRAMLGPLRKAVSRLAA*
Ga0066388_1005794391	3300005332	Tropical Forest Soil	VADDRELLDRIQALADAMAEGPALPRSEMEPTVTDGYARALELDAECLRIERRIDELTEASVEGRPVVRGEMSALLRRYQEATRQSAELRTLLAPLRKVVSRAAA*
Ga0070661_1010146341	3300005344	Corn Rhizosphere	VADDRELLERIQALADAMAEGQALPRSEMEPTVTDGYARALELDAECLRIERRIDAMTQDAVEGHGVERGEMSALLKRFQEASRQSAELRAMLGPLRKAVSRLAA*
Ga0070674_1018315621	3300005356	Miscanthus Rhizosphere	VADDRELLERIQALTDAMAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNESASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0066686_101572932	3300005446	Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDELTHDTGVVGHDMAGGELPALLRRLQEAARQSTELRELLAPLRKIVSRAAA*
Ga0070662_1014316791	3300005457	Corn Rhizosphere	RIQALTDAMAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNESASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0070684_1000237153	3300005535	Corn Rhizosphere	VADDRELLERIQALADAIAEGQALPRSEMEPTVTDGYARALELDAECLRIERKIDALTQDSVEGRSVPRGEMSTLHRRYQEASTQSAELRAILAPLRKAVSRLAA*
Ga0066698_103029653	3300005558	Soil	LVADDRELLERIQALADAMAEGPALPRSKMEPIVTEGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA*
Ga0066905_1000000818	3300005713	Tropical Forest Soil	VADDRELLERIQALADAVAEGPALPRSEMEPIVTDGYARALELDAECLRIEQRIDELTEDAVEGHVLPRGELSNLLRRMHEANEQSRELRELLAPLRKICARAAA*
Ga0066905_1001126632	3300005713	Tropical Forest Soil	MAEGAALPRSEMEPTVTDGYARALELDAECLRIERRIDELTQASVEGRAVPRGELTTLTRRLQEASRQSAELRTLLAPLRKVVSRAAA*
Ga0066903_1004025053	3300005764	Tropical Forest Soil	MTEIVKSLGPGVEKDGPLGPWNPNESPANNRLLVADDDRELLDRIQALTDAMAEGAALPRSEMEPTVTDGYARALELDAECLRIEARIDALTQDSVEGLSVPRGEMTALHRRLQEASAQSAELRAMLAPLRKIVSRAAA*
Ga0081540_10233903	3300005983	Tabebuia Heterophylla Rhizosphere	VADDRELLERIQALTDAMAEGPALPRSEMEPTVTDGYARALELDAECLRIERRIDELTEASVEGHSVPRGELSALLRRYQEATRQSSELRTLLAPLRKVVSRAAA*
Ga0066652_1011708522	3300006046	Soil	LVADDRELLERIQALTDAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA*
Ga0070716_1004092182	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VANDGELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDELTDASAAGRPAPRGELSALLERFQEASKQSAELRELLAPLRKIVSRAAA*
Ga0074050_116873361	3300006577	Soil	MGRSAHSPRPGRLQIIALLVANDGELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGRQVPRGELSALIRRLNEASRQSRELRELLAPLRKLVAKAA*
Ga0074054_100221031	3300006579	Soil	EGPALPRSKMEPIVTDGYARALELDAECLRIEQRIEDLTEATAAGQQVPRGELSALLRRLHEASHQSRELRELLAPLRKLVAKAA*
Ga0074060_120243212	3300006604	Soil	MGRSAHSPRLGRLQIIALLVANDGELLERIRALTAAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGRQVPRGELSALIRRLNEASRQSRELRELLAPLRKLVAKAA*
Ga0074057_100469873	3300006605	Soil	VANDGELLERIRALTAAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIEDLTEATAAGQQVPRGELSALLRRLHEASHQSRELRELLAPLRKLVAKAA*
Ga0074062_129368002	3300006606	Soil	VANDGELLERIRALTAAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEATAAGRQVPRGELSALLRRLHEASHQSRELRELLAPLRKLVAKAA*
Ga0066653_101030593	3300006791	Soil	LERIQALADAMAEGPALPRSKMEPIVTEGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA*
Ga0075433_111611621	3300006852	Populus Rhizosphere	VADDRELLGRIQALTDAMAEGSALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELSVLLERLQEATRQSTELRELLAPLRKIVAEAA*
Ga0075425_1011277732	3300006854	Populus Rhizosphere	VADDRELLERIRALAAATAEGAALPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELSALLGRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0075434_1022492771	3300006871	Populus Rhizosphere	LLVADDRELLERIRALAAATAEGAALPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELSALLGRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0068865_1005993582	3300006881	Miscanthus Rhizosphere	VADDRELLERIQALTDAMAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNESASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVV
Ga0075424_1018319242	3300006904	Populus Rhizosphere	VADDRELLERIQALADAMAEGQSLPRSEMEPIVTDGYARALELDAECLRIEQRLDELAEESAAGRRAQRGELAGLLRRLHDATEQSKELRTMLAPLRKVVSRAAA*
Ga0105243_111719302	3300009148	Miscanthus Rhizosphere	VADDRELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDELTNESASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0075423_102201012	3300009162	Populus Rhizosphere	LVADDRELLGRIQALTDAMAEGSALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELSVLLERLQEATRQSTELRELLAPLRKIVAEAA*
Ga0075423_127721361	3300009162	Populus Rhizosphere	VADDRELLERIQALTDAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDELTCDTVAGHDMADGELSDLLRRLREATRQSTELRELLAPLRKMVAKAA
Ga0105249_129082461	3300009553	Switchgrass Rhizosphere	VADDRELLERIQALTEAMAEGPAPPRKEMEPTVTDGYARALELDAECLRIEQRIDELTNESASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0126380_103182262	3300010043	Tropical Forest Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPTVTDGYARALELDAECLRIERRIDELTEASVEGRPVVRGEMSALLRRYQEATRQSAELRTLLAPLRKVVSRAAA*
Ga0126384_109763432	3300010046	Tropical Forest Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPTVTDGYARALELDAECLRIEQKIDALTEASAEGRAVPRGELSALLRRYQEATRQSTELRTLLAPLRKVVSRAAA*
Ga0126382_103180432	3300010047	Tropical Forest Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPTVTDGYARALELDAECLRIEGQIDALTEASVQGHGVPRGELSALLKRYQEATRQSAELRALLAPLRKVVSRAAA*
Ga0134088_107263511	3300010304	Grasslands Soil	LVADDRELLERIQALADAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDELTHDTGVVGHDMAGGELPALLRRLQEAARQSTELRELLAPLRKIVSRAAA*
Ga0134084_102904442	3300010322	Grasslands Soil	ANNRLLVADDRELLERIQALADAMAEGPALPRSKMEPIVTEGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA*
Ga0134111_100079833	3300010329	Grasslands Soil	LVADDRELLERIQALTDAMAEGPALPRSKMEPIVTEGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA*
Ga0126370_110745491	3300010358	Tropical Forest Soil	DDRELLERIQALTDAMAEGAALPRSEMEPTVTDGYARALELDAECLRIEARIDALTEDSVEGLSVPRREMTALHRRLQEASAQSAELRAMLAPLRKIVSRAAA*
Ga0126372_112167452	3300010360	Tropical Forest Soil	MTEIVKSLGPDAEQDGPLGPWNRAEPPANNRFLVADDDRELLERIQALTDAMAEGAALPRSEMEPTVTDGYARALELDAECLRIEAKIDALTQDSVEGLSVPRREMTALHRRLQEASAQSAELRAMLAPLRKIVSRAAA*
Ga0126377_122540402	3300010362	Tropical Forest Soil	VADDQELLERIQALADAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDELTEDAAAGREVPRGELKALLRRLRDASMQSAELRALLGPLRKVVARAAA*
Ga0138513_1000801951	3300011000	Soil	VADDRELLERIQALTDAMAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELAALLRRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0137364_104392321	3300012198	Vadose Zone Soil	VANDGELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLIEETAAGQDVPGGELSALLRRLHEASRQSRELRELLAPLRKLVVKAA*
Ga0137382_100227946	3300012200	Vadose Zone Soil	EAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDHLTEETAAGQDVPGGELSALLRRLHEASRQSRELRELLAPLRKLVAKAA*
Ga0137382_103246541	3300012200	Vadose Zone Soil	VANDGELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLIEETAAGHEAPRGELAALLRRLDEASRQSRELRELLAPLRKVVVKAA*
Ga0137374_112832061	3300012204	Vadose Zone Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELSALLERLQEATRQGTELRELLAPLRKIVAEAA*
Ga0137376_102218752	3300012208	Vadose Zone Soil	VANDGELLERIRALTEAMAEGQALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLIEETAAGHEAPRGELAALLRRLDEASRQSRELRELLAPLRKVVVKAA*
Ga0137370_100326652	3300012285	Vadose Zone Soil	VANDGELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDHLIEETAAGQDVPGGELSALLRRLHEASRQSRELRELLAPLRKLVVKAA*
Ga0137369_104269042	3300012355	Vadose Zone Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELSALLERLQEATRQGTELRELLAPLRKIVAEAAY*
Ga0137369_104917531	3300012355	Vadose Zone Soil	VVADDRELLERIQALTDAMAKGPALPRSEMEPIVTDGYARALELDAECLRIERHIDELTQDTGVVGHAMALGELPALLRRLQEATRQSTELREQLAPLRKIVSRAAA*
Ga0157338_10242431	3300012515	Arabidopsis Rhizosphere	VADDRELLERIQALADAMAEGQALPRSEMEPTVTDGYARALELDAECLRIERRIDDLTEETVEGHAIARGEIATLLKRLHEASQQSRELRELLAP
Ga0157309_103674511	3300012895	Soil	AMAEGPAPPRKEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA*
Ga0137407_123368912	3300012930	Vadose Zone Soil	LVADDRELLERIQALTDAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDELTHDTGVVGHDMAGGELPALLRRLQEAARQSTELRELLAPLRKIVSRAAA*
Ga0126375_105559702	3300012948	Tropical Forest Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPTVTDGYARALELDAECLRIEGQIDALTEASVQGHGVPRGELSTLLKRYQEATRQSAELRALLAPLRKVVSRAAA*
Ga0164299_107254661	3300012958	Soil	VAADSEQQQRIQALTDAMAEGSALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELLALLERLQEATRQSSELRELLAPLRKIVAEAA*
Ga0164301_117042351	3300012960	Soil	VADDRELLERIRALTAAVAEGQVLPRDEVEPTVTDGYARALELDAECLRIERRIDELTHDTVVVGYEMPRGELGALLERLQEASRQSTELRELLGPLRKVVGKAA*
Ga0164302_101453022	3300012961	Soil	VGDDRELLERIHALCDAMAEGQSLPRSEMEPIVTDGYARALELDAECLRIERRLDELGQYAVEGHAFQRGELSTLLGRFHDAHEQSRELRALLAPLRKLVSRAAA*
Ga0164302_104257712	3300012961	Soil	LVADDRELLGRIQALTDAMAEGSALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELSALLKRLQEATRQST
Ga0126369_134308161	3300012971	Tropical Forest Soil	LADDRELLERIQALADSMAEGQTLPRSEMEPIVTDGYARALELDAECLRIEQRLDELAAYTAAGEVLPRGELARLLRRLHDASEQS
Ga0164304_102412132	3300012986	Soil	VADDRELLERIQALTDAMAEGSALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELLALLERLQEATRQSSELRELLAPLRKIVAEAA*
Ga0164305_112374322	3300012989	Soil	RLLVANDGELLERIRALTAAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIEDLTEATAAGQQVPRGELSALLRRLHEASHQSRELRELLAPLRKLVAKAA*
Ga0134078_102225692	3300014157	Grasslands Soil	VADDRELLERIQALADAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRRLHETSRHSAELRALLAPLRKVVSRAA*
Ga0132258_107841713	3300015371	Arabidopsis Rhizosphere	VADDRELLERIQALADAMAEGQTLPRSEMEPIVTDGYARALELDAECLRIEQRLDELAAYTAAGEVLPRGELARLLRRLHDASEQSRELRELLGPLRKIVSRAAA*
Ga0132258_121663543	3300015371	Arabidopsis Rhizosphere	LAEDPANNRFLVADDRELRERIQALADAMAEGQALPRSEMEPTVTDGYARALELDAECLRIERRIDALTEDSVEGRSVPRSEMSALHRRLQEASAQSADLRELLGPLRKAVSRLAA*
Ga0132256_1000628793	3300015372	Arabidopsis Rhizosphere	VADDRELLERIQALADAMAEGQTLPRSEMEPIVTDGYARALELDAETLRIEQRLDELAAYTAAGEVLPRGELARLLRRLHDASEQSRELRELLGPLRKIVSKAAA*
Ga0132257_1006320542	3300015373	Arabidopsis Rhizosphere	LAEDPANNRFLVADDRELRERIQALADAMAEGQALPRSEMEPTVTDGYARALELDAECLRIERRIDALTEDSVEGRSVPRSEMSALHRRLQEASTQSAELRAMLAPLRKAVSRLAA*
Ga0132255_1001211242	3300015374	Arabidopsis Rhizosphere	VADDRELLERIQALADAMAEGQTLPRSEMEPIVTDGYARALELDAETLRIEQRLDELAAYTAAGEVLPRGELARLLRRLHDASEQSRELRELLGPLRKIVSRAAA*
Ga0134069_10588072	3300017654	Grasslands Soil	LVADDRELLERIQALADAMAEGPALPRSKMEPIVTEGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA
Ga0184634_100571422	3300018031	Groundwater Sediment	VANDGELLERIRALTEAMAEGQALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQDVPRGELSALLRRLDEASGQSRELRELLAPLRKVVAKAA
Ga0184626_103305241	3300018053	Groundwater Sediment	VANDGELLERIRALTEAMAEGQALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0184621_100044584	3300018054	Groundwater Sediment	VANDRELLERIRALTEAMAEGQALPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEASRQSSELRELLAPIRKVVAKAA
Ga0184635_100970532	3300018072	Groundwater Sediment	VADDRELLERIQALTDAMAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHEASRQSSELRELLAPIRKVVAKAA
Ga0184635_104196871	3300018072	Groundwater Sediment	VADDRELLERIQALTDATAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDELTHDTVVVGHEMPSGELSALLKRLQEATRQSTELRELLGPLRKVVGKAA
Ga0184625_103388842	3300018081	Groundwater Sediment	VADDRELLERIQALTDATAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTHDTVVVGHEMPSGELSALLKRLQEATRQSTELRELLAPLRKIVAEAA
Ga0184625_104149131	3300018081	Groundwater Sediment	VADDRELLERIQALTDAIAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA
Ga0193701_10025013	3300019875	Soil	VANDRELLERIRALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0193703_10168823	3300019876	Soil	TEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0193725_11490741	3300019883	Soil	VANDGELLERIRALTEAMAEGQALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHETSRQS
Ga0193730_10132293	3300020002	Soil	VANDRELLERIRALAEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0193697_11427511	3300020005	Soil	VANDRELLERIRALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0193696_10099295	3300020016	Soil	VANDRELLERIRALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHETSRQSRELRELLAPLRKVVAKAA
Ga0210381_100288032	3300021078	Groundwater Sediment	VANDRELLERIWALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0210381_102211761	3300021078	Groundwater Sediment	NDRELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIERRIDDLTEETAAGQDVPRGELSALLRRLDEASGQSRELRELLAPLRKVVAKAA
Ga0222622_103924942	3300022756	Groundwater Sediment	VANDRELLERIRALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAEGREVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0207663_101304893	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VANDGELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDELTDASAAGRPAPRGELSALLERFQEASKQSAELRELLAPLRKIVSRAAA
Ga0207649_104602472	3300025920	Corn Rhizosphere	VADDRELLERIQALADAIAEGQALPRSEMEPTVTDGYARALELDAECLRIERRIDAMTQDAVEGHGVERGEMSALLKRFQEASRQSAELRAMLGPLRKAVSRLAA
Ga0207687_107603302	3300025927	Miscanthus Rhizosphere	VADDRELLERIQALTEAMAEGPAPPRKEMEPTVTDGYARALELDAECLRIEQRIDELTNDSASGRPAPRGELSALLRRFQEASRQSAELRALLAPLVLSETFPVPVL
Ga0207669_116265652	3300025937	Miscanthus Rhizosphere	VADDRELLERIQALTDAMAEGPAPPRSEMEPTVTDGYARALELDAECLRIEQRIDELTNESASGRPAPRGELSALLRRFQEASRQSAELRALLAPLRKVVSRAAA
Ga0207661_100291461	3300025944	Corn Rhizosphere	VADDRELLERIQALADAIAEGQALPRSEMEPTVTDGYARALELDAECLRIERKIDALTQDSVEGRSVPRGEMSTLHRRYQEASTQSAELRAILAPLRKAVSRLAA
Ga0207661_100687451	3300025944	Corn Rhizosphere	VADDRELLERIQALADAMAEGQALPRSEMEPTVTDGYARALELDAECLRIERRIDAMTQDAVEGHGVERGEMSALLKRFQEASRQSAELRAMLGPLRKAVSRLAA
Ga0209468_11218902	3300026306	Soil	LLVADDRELLERIQALADAMAEGPALPRSKMEPIVTEGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA
Ga0209470_10515682	3300026324	Soil	VADDRELLERIQALADAMAEGPALPRSKMEPIVTEGYARALELDAECLRIERRIDELTEDTAAGREVARGELSQLLRHLHETSRQSAELRALLAPLRKVVSRAA
Ga0207981_10091602	3300027560	Soil	VADDRDLLERIQALTAAVAEGQALPRDEVEPTVTDGYARALELDAECLRIERRIDELTHDTVVVGHDMPRGELSALLRRLQHATRQSTELRELLAPLRKLVAKAA
Ga0307285_102228272	3300028712	Soil	VANDRELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAEGREVPGEELSALLRRLHEVSQQSREL
Ga0307307_100242261	3300028718	Soil	VANDRELLERIRALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGKEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0307317_102511731	3300028720	Soil	VANDRELLERIRALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEVNQQSRELRELLAPLRKVVAKAA
Ga0307317_102924732	3300028720	Soil	AMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAEGREVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0307318_101024932	3300028744	Soil	VADDRELLERIQALADAMAEGAALPRSEMEPTVTDGYARALELDAECLRIEQRIDELTAYSAAGHPAPRGELSALLTRFQEASSQSGELRELLAPLRKVVSRAAA
Ga0307288_102093462	3300028778	Soil	ALIEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0307503_102672692	3300028802	Soil	MAEGQALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHETSRQSRELRELLAPLRKVVAKAA
Ga0307281_101323002	3300028803	Soil	VANDGELLERIRALTEAMAEGQALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHETSRQSRELRELLAPLRKVVAKAA
Ga0307294_103905541	3300028810	Soil	MAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0307296_105305321	3300028819	Soil	ANDGELLERIRALTEAMAEGQALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHEASRQSSELRELLAPIRKVVAKAA
Ga0307289_100584593	3300028875	Soil	VVNNRLLVANDRELLERIWALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0307278_100596432	3300028878	Soil	VADDRELLERIQALTDAMAEGPALPRSEMEPIVTDGYARALELDAECLRIERRIDDLTRDTVVVGHEMPSGELSALLERLQEATRQSTELRELLAPLRKIVAEAA
Ga0307308_101426023	3300028884	Soil	RIRALAEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEETVAGQEVPGEELSALLRRLHEVSQQSRELRELLAPLRKVVAKAA
Ga0307304_103503872	3300028885	Soil	VADDRELLERIQALADAMADGPALPRSEMEPTVTDGYARALELDAECLRIEQRIDELIADSAAGHAAPRGELSALLRRFQEANRQSTELRALLAPLRKVVSRAAA
Ga0307498_102072722	3300031170	Soil	VANDRELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHEAGRQSRELRELLAPLRKVVAKAA
Ga0307500_100612452	3300031198	Soil	VANDRELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDDLTEETAAGQEVPGEELSALLRRLHEAGRQSRELRE
Ga0307497_100150193	3300031226	Soil	MGRSAHSPRPGGLQIIALLVANDGELLERIRALTEAMAEGPALPRSKMEPIVTDGYARALELDAECLRIEQRIDVLTEETGAGNDVPPGELSALLARLHEASQQSRHLRELLAPLRKVVAKAA
Ga0307468_1019646222	3300031740	Hardwood Forest Soil	VANDRELLERIRALTEAMAEGQTLPRSKMEPIVTDGYARALELDAECLRIEQRIDGLTEDTVAGQEVPGEELSALLRRLHDVSQQTRELRELLAPLRKVVAEAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075240

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences