Metagenome / Metatranscriptome Family F075222

Basic Information
Family ID	F075222
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	47 residues
Representative Sequence	TLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Number of Associated Samples	111
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.40 %
% of genes near scaffold ends (potentially truncated)	92.44 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Bacteria (91.597 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.924 % of family members)
Environment Ontology (ENVO)	Unclassified (31.933 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.336 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.73% β-sheet: 2.70% Coil/Unstructured: 67.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02130	YbeY	72.27
PF03462	PCRF	8.40
PF13343	SBP_bac_6	1.68
PF09335	SNARE_assoc	1.68
PF10017	Methyltransf_33	1.68
PF09084	NMT1	0.84
PF04365	BrnT_toxin	0.84
PF13847	Methyltransf_31	0.84
PF13442	Cytochrome_CBB3	0.84
PF07679	I-set	0.84
PF13751	DDE_Tnp_1_6	0.84
PF01850	PIN	0.84
PF13711	DUF4160	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0319	ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme	Translation, ribosomal structure and biogenesis [J]	72.27
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	8.40
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	8.40
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.68
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.68
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.68
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.84
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.84
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.44 %
Unclassified	root	N/A	7.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.44 %
Unclassified	root	N/A	7.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.60 %
Unclassified	root	N/A	7.56 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.34 %
Unclassified	root	N/A	7.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.52 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.84 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.84 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.84 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	60.50 %
Unclassified	root	N/A	7.56 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.84 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	60.50 %
Unclassified	root	N/A	7.56 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.52 %
candidate division KSB1	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1	0.84 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.84 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	11.76 %
Unclassified	root	N/A	7.56 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.52 %
unclassified candidate division KSB1	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1	0.84 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.84 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.84 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.76 %
Unclassified	root	N/A	7.56 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.52 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.84 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.84 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.84 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.76 %
Unclassified	root	N/A	7.56 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.52 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.84 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.84 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.84 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.76 %
Unclassified	root	N/A	7.56 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.52 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.84 %
Spirosoma	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	0.84 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.84 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.76 %
Unclassified	root	N/A	7.56 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.52 %
Spirosoma spitsbergense	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma spitsbergense	0.84 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.84 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	0.84 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100863260	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300002407\|C687J29651_10200026	Not Available	641	Open in IMG/M
3300003319\|soilL2_10030525	All Organisms → cellular organisms → Bacteria → Proteobacteria	3322	Open in IMG/M
3300004067\|Ga0055485_10006426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1856	Open in IMG/M
3300004067\|Ga0055485_10091331	Not Available	764	Open in IMG/M
3300004071\|Ga0055486_10194468	Not Available	513	Open in IMG/M
3300004114\|Ga0062593_100420673	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300004782\|Ga0062382_10159148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	961	Open in IMG/M
3300005172\|Ga0066683_10614870	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	656	Open in IMG/M
3300005186\|Ga0066676_10804417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	636	Open in IMG/M
3300005335\|Ga0070666_10362532	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1038	Open in IMG/M
3300005335\|Ga0070666_11138484	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	580	Open in IMG/M
3300005344\|Ga0070661_100297874	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300005444\|Ga0070694_100588761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	895	Open in IMG/M
3300005444\|Ga0070694_100877866	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	739	Open in IMG/M
3300005467\|Ga0070706_100427322	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300005471\|Ga0070698_102198612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300005518\|Ga0070699_101563813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	604	Open in IMG/M
3300005530\|Ga0070679_100067902	All Organisms → cellular organisms → Bacteria	3556	Open in IMG/M
3300005539\|Ga0068853_101419395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	672	Open in IMG/M
3300005549\|Ga0070704_100344728	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300005559\|Ga0066700_10813815	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	628	Open in IMG/M
3300005614\|Ga0068856_101249170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	759	Open in IMG/M
3300005713\|Ga0066905_100670263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	886	Open in IMG/M
3300005841\|Ga0068863_102359569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300006173\|Ga0070716_101035008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	651	Open in IMG/M
3300006196\|Ga0075422_10266265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	725	Open in IMG/M
3300006794\|Ga0066658_10307658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	847	Open in IMG/M
3300006846\|Ga0075430_100360980	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300006871\|Ga0075434_100767841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	981	Open in IMG/M
3300006871\|Ga0075434_102161836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300007076\|Ga0075435_100389823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1197	Open in IMG/M
3300009094\|Ga0111539_10994854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	975	Open in IMG/M
3300009100\|Ga0075418_10481067	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300009131\|Ga0115027_11607410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300009147\|Ga0114129_10761317	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300009156\|Ga0111538_14079126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300009166\|Ga0105100_10313214	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009176\|Ga0105242_10937846	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300009179\|Ga0115028_12095438	Not Available	502	Open in IMG/M
3300009610\|Ga0105340_1033197	Not Available	2005	Open in IMG/M
3300009799\|Ga0105075_1048442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300009822\|Ga0105066_1165678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300009823\|Ga0105078_1016373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	831	Open in IMG/M
3300010043\|Ga0126380_12133899	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	516	Open in IMG/M
3300010396\|Ga0134126_10063973	All Organisms → cellular organisms → Bacteria	4578	Open in IMG/M
3300010396\|Ga0134126_11229835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	831	Open in IMG/M
3300010399\|Ga0134127_10985337	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	902	Open in IMG/M
3300010401\|Ga0134121_10013492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6490	Open in IMG/M
3300011416\|Ga0137422_1076583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	804	Open in IMG/M
3300011430\|Ga0137423_1211926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300011433\|Ga0137443_1072594	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300011435\|Ga0137426_1008454	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300011441\|Ga0137452_1099571	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300012359\|Ga0137385_11465534	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	546	Open in IMG/M
3300012486\|Ga0157331_1009158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	700	Open in IMG/M
3300012891\|Ga0157305_10171748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300012915\|Ga0157302_10056505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1127	Open in IMG/M
3300013296\|Ga0157374_10056169	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300013306\|Ga0163162_10965609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	963	Open in IMG/M
3300014300\|Ga0075321_1060716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	693	Open in IMG/M
3300014870\|Ga0180080_1059297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	647	Open in IMG/M
3300015256\|Ga0180073_1083492	Not Available	680	Open in IMG/M
3300016357\|Ga0182032_10208895	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300018028\|Ga0184608_10386374	Not Available	610	Open in IMG/M
3300018059\|Ga0184615_10011179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4895	Open in IMG/M
3300018072\|Ga0184635_10276919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	662	Open in IMG/M
3300018077\|Ga0184633_10230468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	954	Open in IMG/M
3300018082\|Ga0184639_10229627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	983	Open in IMG/M
3300018084\|Ga0184629_10191716	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300018422\|Ga0190265_13583253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300018429\|Ga0190272_10855905	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	846	Open in IMG/M
3300019356\|Ga0173481_10267086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	779	Open in IMG/M
3300019361\|Ga0173482_10429151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	622	Open in IMG/M
3300020579\|Ga0210407_10982038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300021090\|Ga0210377_10010434	All Organisms → cellular organisms → Bacteria	7214	Open in IMG/M
3300021344\|Ga0193719_10323479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	644	Open in IMG/M
3300025159\|Ga0209619_10135110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1439	Open in IMG/M
3300025537\|Ga0210061_1077357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	580	Open in IMG/M
3300025912\|Ga0207707_10053894	All Organisms → cellular organisms → Bacteria	3501	Open in IMG/M
3300025917\|Ga0207660_10364154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	1160	Open in IMG/M
3300025920\|Ga0207649_10351791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1091	Open in IMG/M
3300025921\|Ga0207652_10098748	All Organisms → cellular organisms → Bacteria	2575	Open in IMG/M
3300025926\|Ga0207659_11107867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	681	Open in IMG/M
3300025926\|Ga0207659_11282826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	629	Open in IMG/M
3300025930\|Ga0207701_10349944	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300025931\|Ga0207644_10936059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	726	Open in IMG/M
3300025934\|Ga0207686_11290113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	599	Open in IMG/M
3300025936\|Ga0207670_11604179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	553	Open in IMG/M
3300025939\|Ga0207665_10996202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	666	Open in IMG/M
3300025986\|Ga0207658_11041836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	747	Open in IMG/M
3300025993\|Ga0208415_1015711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	723	Open in IMG/M
3300026088\|Ga0207641_10351039	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300026089\|Ga0207648_10363018	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300026314\|Ga0209268_1119031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	669	Open in IMG/M
3300026320\|Ga0209131_1240488	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300026537\|Ga0209157_1311189	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	574	Open in IMG/M
3300027513\|Ga0208685_1115539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300027526\|Ga0209968_1018994	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300027637\|Ga0209818_1095188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	782	Open in IMG/M
3300027778\|Ga0209464_10285057	Not Available	600	Open in IMG/M
3300027862\|Ga0209701_10382490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300027907\|Ga0207428_10308070	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300027907\|Ga0207428_10338938	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	1108	Open in IMG/M
3300028420\|Ga0210366_10527864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300028803\|Ga0307281_10024007	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300031170\|Ga0307498_10014304	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300031716\|Ga0310813_10982075	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	769	Open in IMG/M
3300031820\|Ga0307473_10609576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	755	Open in IMG/M
3300031941\|Ga0310912_10455808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	997	Open in IMG/M
3300031944\|Ga0310884_10668519	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	626	Open in IMG/M
3300031965\|Ga0326597_12185130	Not Available	506	Open in IMG/M
3300032174\|Ga0307470_10153349	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300032174\|Ga0307470_11164628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	624	Open in IMG/M
3300032211\|Ga0310896_10557448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	635	Open in IMG/M
3300033004\|Ga0335084_10525029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1215	Open in IMG/M
3300033412\|Ga0310810_10321354	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300033815\|Ga0364946_000448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	5956	Open in IMG/M
3300034177\|Ga0364932_0238760	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma spitsbergense	688	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.63%
Host-Associated	Host-Associated	24.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.78%
Plants	Host-Associated → Plants	24.37%
Aquatic	Environmental → Aquatic	21.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.49%
Sediment	Environmental → Aquatic → Sediment	12.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.88%
Freshwater	Environmental → Aquatic → Freshwater	5.04%
Marine	Environmental → Aquatic → Marine	4.20%
Floodplain	Environmental → Terrestrial → Floodplain	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.61%
Loam	Environmental → Terrestrial → Soil → Loam	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.52%
Sand	Environmental → Terrestrial → Soil → Sand	2.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.68%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.04%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.84%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.24%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.04%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.52%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.68%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.84%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.84%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002407	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028420	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075222

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1008632603	3300000364	Soil	MAQQIPRLTLRKGVKQIPRHQELYKKDFVFVNPASIGANLXXLXXSXQQVFNIR*
C687J29651_102000261	3300002407	Soil	ARFPHKGIKQIPRHQELYKKDFVFVNPTFIGPNLNELTASYQRIFNMR*
soilL2_100305253	3300003319	Sugarcane Root And Bulk Soil	TVLAQQVPRLTLRKGIKQIPRHQDFYKKDFVFVNPAFIGPNLNELIASYQQIFEVR*
Ga0055485_100064263	3300004067	Natural And Restored Wetlands	LAQQVPRITLRKGVKQIPRHQELYKKEFVFVNPAYLGANLTELIASYQQVFNIR*
Ga0055485_100913312	3300004067	Natural And Restored Wetlands	LAQQVPRITLRKGVKQIPRHQELYKKEFVFVNPAYLGANLTELIASYQQVFNVR*
Ga0055486_101944681	3300004071	Natural And Restored Wetlands	QQVPRITLRKGVKQIPRHQELYKKEFVFVNPAYLGANLTELIASYQQVFNIR*
Ga0062593_1004206731	3300004114	Soil	RITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR*
Ga0062382_101591481	3300004782	Wetland Sediment	VKQIPRHQELYKKDFVFVNPAFLGANLTELIASYQQVFNIR*
Ga0066683_106148701	3300005172	Soil	KGVKQIPRHQELYKRDFVFVNPASIGPNLNELIATYQKIFNVN*
Ga0066676_108044172	3300005186	Soil	TLRKGVKQIPRHQELYKRDFVFVNPASIGPNLNELIATYQKIFNVN*
Ga0070666_103625323	3300005335	Switchgrass Rhizosphere	LRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQVFNVR*
Ga0070666_111384841	3300005335	Switchgrass Rhizosphere	RKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR*
Ga0070661_1002978743	3300005344	Corn Rhizosphere	PRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR*
Ga0070694_1005887612	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LAQQIPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR*
Ga0070694_1008778662	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LRKGIKQIPRHQELYKKEFVFVKPASIGPNLTELIASYQQIFNVR*
Ga0070706_1004273221	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RKGIKQIPRHQELYKKEFVFVNPAFLGPNLNELIASYQQIFNTR*
Ga0070698_1021986121	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LAQQIPRISLRKGIKQIPRHQDLYKKEFVFVNPASIGPSLNELIVTYQQIFNVR*
Ga0070699_1015638131	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EGQTVLAQQVPRLTLRKGIKQIPRHQDLYKKDFVFVNPASIGPNLNELIASYQQTFDVR*
Ga0070679_1000679021	3300005530	Corn Rhizosphere	LRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR*
Ga0068853_1014193951	3300005539	Corn Rhizosphere	VLAQQIPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR*
Ga0070704_1003447283	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GQTVLAQQIPRITLRKGIKQIPRHQELYKKEFVFVNPAFLGPNLNELIASYQQIFNTR*
Ga0066700_108138152	3300005559	Soil	QQIPRLTLRKGVKQIPRHQELYKKEFVFVNPASIGANLNELIASYQQVFNVR*
Ga0068856_1012491701	3300005614	Corn Rhizosphere	RITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR*
Ga0066905_1006702631	3300005713	Tropical Forest Soil	KQIPRHQELYKKDFVFVNPASIGANLNELIASYQQIFTVR*
Ga0068863_1023595691	3300005841	Switchgrass Rhizosphere	IPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR*
Ga0070716_1010350082	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	KQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFNIR*
Ga0075422_102662652	3300006196	Populus Rhizosphere	IPRHQELYKKDFVFVNPASIGPNLNELITSYQQIFNVR*
Ga0066658_103076581	3300006794	Soil	AAVLAQQVPRLTLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR*
Ga0075430_1003609801	3300006846	Populus Rhizosphere	KQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFDVR*
Ga0075434_1007678413	3300006871	Populus Rhizosphere	PRHQELYKKDFVFVNPASIGPNLNDLIASYQQVFNVR*
Ga0075434_1021618362	3300006871	Populus Rhizosphere	VLAQQIPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQVFNVR*
Ga0075435_1003898231	3300007076	Populus Rhizosphere	AQQIPRMTLRKGVKQIPRHQELYKKDFVFVNPASIGPNLNALIASYQQIFDIR*
Ga0111539_109948541	3300009094	Populus Rhizosphere	QELYKKDFVFVNPASIGPNLNDLIASYQQVFNVR*
Ga0075418_104810673	3300009100	Populus Rhizosphere	VKQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFNVR*
Ga0115027_116074102	3300009131	Wetland	RLTLRKGVKQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFNVR*
Ga0114129_107613173	3300009147	Populus Rhizosphere	QIPRHQELYKKDFVFVNPASIGPNLNELIASYQQIFNVR*
Ga0111538_140791261	3300009156	Populus Rhizosphere	HQELYKKEFVFVNPASIGPNLNDLIASYQQVFNVR*
Ga0105100_103132142	3300009166	Freshwater Sediment	VLALQVPRITLRKGVKQIPRHQELYKNGFVFVNPAYLGANLTELIASYQQVFNIR*
Ga0105242_109378461	3300009176	Miscanthus Rhizosphere	MLSEEGQSVLAQQIPRITLRKGIKQIPRHHCLYKKEFVFVNPASIGPNLNDLIAS
Ga0115028_120954381	3300009179	Wetland	QIPRHQELYKKEFVFVNPASLGPNLTELIASYQQVFNVR*
Ga0105340_10331972	3300009610	Soil	PRHQELYKKEFVYVNPAYLGANLTELIASYQQVFNIR*
Ga0105075_10484421	3300009799	Groundwater Sand	SLMAQQIPRLTLRKGVKQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFNVR*
Ga0105066_11656781	3300009822	Groundwater Sand	KGVKQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFNVR*
Ga0105078_10163731	3300009823	Groundwater Sand	RHQELYKKDFVFVNPASIGANLNELIASYQQVFNVR*
Ga0126380_121338992	3300010043	Tropical Forest Soil	GVKQIPRHQELYKKDFVFVNPASIGANLNDLIASYQQIFNVR*
Ga0134126_100639731	3300010396	Terrestrial Soil	TLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR*
Ga0134126_112298351	3300010396	Terrestrial Soil	TLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQVFNVR*
Ga0134127_109853371	3300010399	Terrestrial Soil	QTVLAQQIPRITQRNGIKQIPRHQELYKKEFAFVNPASIGPQLNELAASYRQIFNVR*
Ga0134121_1001349210	3300010401	Terrestrial Soil	PRHQELYKKEFVFVNPASIGPNLNDLIASYQQVFNVR*
Ga0137422_10765831	3300011416	Soil	IPRLTLRKGIKQIPRYQDLYKKEFVFVNPASLGPNLNEVMASYQQIFNVR*
Ga0137423_12119262	3300011430	Soil	PRLTLRKGVKQIPRHQELYKRDFVFVNPASIGANLNELTASYQQIFNVR*
Ga0137443_10725941	3300011433	Soil	RNGIKQIPRYQELYKKEFVFVNPATLGPNLKEVMASYQQIFNVR*
Ga0137426_10084541	3300011435	Soil	HQELYKKEFVFVNPASLGPNLTELIASYQQVFNIR*
Ga0137452_10995713	3300011441	Soil	MAQQIPRLTLRNGIKQIPRYQELYKKEFVFVNPASLGPNLNEVMASYQQIFNVR*
Ga0137385_114655341	3300012359	Vadose Zone Soil	SLRKGIKQIPRHQELYKKEFVFVNPASIGPSLSELIATYQQIFNVR*
Ga0157331_10091581	3300012486	Soil	KQIPRHQELYKKDFVFVNPASIGPNLNDLIASYQQIFNIR*
Ga0157305_101717482	3300012891	Soil	EGQTVLAQQVPRITLRKGVKQIPRHQELYKKEFVFVNPAYLGANLTDLIASYQQVFNLR*
Ga0157302_100565053	3300012915	Soil	AQQIPCITLRKGIKQIARHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR*
Ga0157374_100561691	3300013296	Miscanthus Rhizosphere	QELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR*
Ga0163162_109656093	3300013306	Switchgrass Rhizosphere	QELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR*
Ga0075321_10607161	3300014300	Natural And Restored Wetlands	RITLRKGVKQIPRHQELYKKEFVFVNPASIGPNLNELTASYQQIFNVR*
Ga0180080_10592972	3300014870	Soil	MTLRKGIKQIPRHQELYKKDFVFVNPASIGPNLTELTASYQQIFNVR*
Ga0180073_10834921	3300015256	Soil	VTPERKGVKQIPRNQELYKKDFVFVSPASIGPNLKEMVASYQQIFDVR*
Ga0182032_102088951	3300016357	Soil	QIPRITLRKGIKQILRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0184608_103863741	3300018028	Groundwater Sediment	QIPRHQELYKKEFVFVNPASIGPNLNELIASYQQIFNVR
Ga0184615_100111792	3300018059	Groundwater Sediment	VRLQDLTPKRKGVKQIPRNQELYKKDFVFVSPASIEPNLKEMVAFYQQIFDVR
Ga0184635_102769192	3300018072	Groundwater Sediment	GVKQIPRHQELYKKEFVFVNPASIGANLNELIASYQQVFDVR
Ga0184633_102304681	3300018077	Groundwater Sediment	SVMAQQIPRMTLRKGIRQIPRHQELYKKDFVFVNPASIGPNLNELTASYQQIFNVR
Ga0184639_102296272	3300018082	Groundwater Sediment	EGQTVLAQQVPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNELIASYQQIFNVR
Ga0184629_101917163	3300018084	Groundwater Sediment	KQIPRHQELYKKDFVFVNPAFIGPNLNELTASYQQIFNVR
Ga0190265_135832531	3300018422	Soil	RHQELYKKEFVYVNPAYLGANLTELIASYQQVFNIR
Ga0190272_108559051	3300018429	Soil	YQDLYKKEFVFVNPASLGPNLNEVMASYQQIFNVR
Ga0173481_102670861	3300019356	Soil	KQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0173482_104291511	3300019361	Soil	IPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR
Ga0210407_109820382	3300020579	Soil	MPQQIPRLTLRKGVKQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFNIR
Ga0210377_100104344	3300021090	Groundwater Sediment	VRLQDLTPERKGVKQIPRNQELYKKDFVFVSPASIEPNLKEMVAFYQQIFDVR
Ga0193719_103234792	3300021344	Soil	IPRHQELYKKEFVFVNPASIGANLNELIASYQQVFDVR
Ga0209619_101351103	3300025159	Soil	KQIPRHQELYKKDFVFVNPTFIGPNLNELTASYQRIFNMR
Ga0210061_10773571	3300025537	Natural And Restored Wetlands	RHQELYKKEFVFVNPASIGPNLNELIASYQQIFNIR
Ga0207707_100538947	3300025912	Corn Rhizosphere	TLRKGIKQIPRHQDLYKKDFVFVNPASIGPNLNELIASYQQIFDVR
Ga0207660_103641543	3300025917	Corn Rhizosphere	PRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0207649_103517911	3300025920	Corn Rhizosphere	RITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR
Ga0207652_100987484	3300025921	Corn Rhizosphere	PRLTLRKGIKQIPRHQDLYKKDFVFVNPASIGPNLNELIASYQQIFDVR
Ga0207659_111078672	3300025926	Miscanthus Rhizosphere	AQQIPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0207659_112828261	3300025926	Miscanthus Rhizosphere	GQTFMAQQIPRSTLRKGIKQIPRYQELYKKEFVFVNPASLGPNLNEVMASYQQIFNVR
Ga0207701_103499441	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	SVLAQQIPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR
Ga0207644_109360591	3300025931	Switchgrass Rhizosphere	KGIKQIARHQELYKKDFVFVNPASIGPSLNDLIASYQQIFNVR
Ga0207686_112901131	3300025934	Miscanthus Rhizosphere	TLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0207670_116041792	3300025936	Switchgrass Rhizosphere	QIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR
Ga0207665_109962022	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GGKQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFDVR
Ga0207658_110418361	3300025986	Switchgrass Rhizosphere	PRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0208415_10157111	3300025993	Rice Paddy Soil	IPRHQELYKKEFVFVNPASIGPNLNELTASYQQIFNVR
Ga0207641_103510391	3300026088	Switchgrass Rhizosphere	GQTVLAQQIPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQVFNVR
Ga0207648_103630183	3300026089	Miscanthus Rhizosphere	RITLRKGIKQIARHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0209268_11190312	3300026314	Soil	GQTVLAQQIPRLTLRKGVKQIPRHQELYKRDFVFVNPASIGPNLNELIATYQKIFNVN
Ga0209131_12404882	3300026320	Grasslands Soil	EAQTMMAQQIPRLTIRKGVKQTARNQELYQKDFVFVNPASIGPNLSEMVASYRQIFDVR
Ga0209157_13111891	3300026537	Soil	KQIPRHQELYKKDFVFVNPASIGPNLNELIATYQKIFNVN
Ga0208685_11155392	3300027513	Soil	IPRHQELYKKEFVYVNPAYLGANLTELIASYQQVFNIR
Ga0209968_10189943	3300027526	Arabidopsis Thaliana Rhizosphere	ITLRKGVKQIPRHQELYKKEFVFVNPASIGPNLNELTASYQQIFNVR
Ga0209818_10951881	3300027637	Agricultural Soil	VLAQQIPRITLRNGIKQIPRHQDLYKKEFVFVNPASIGPHLNELAASYQQVFNVR
Ga0209464_102850571	3300027778	Wetland Sediment	VLAQQVPRITLRKGIKQIPRHQELYKKDFVFVNPAYLGANLTELIASYQQVFNIR
Ga0209701_103824902	3300027862	Vadose Zone Soil	AQQIPRMTIRKGVKQIPRNQELYKKDFIFVSPASIGPNLNEMIASYQQIFDVR
Ga0207428_103080703	3300027907	Populus Rhizosphere	LTLRKGVKQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFDVR
Ga0207428_103389383	3300027907	Populus Rhizosphere	QIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0210366_105278641	3300028420	Estuarine	QIPRHQELYKKDFVFVNPANLGANLTELIASYQQVFNIR
Ga0307281_100240071	3300028803	Soil	MAQQIPRLTLRKGIKQIPRYQELYKKEFVFVDPASLGPNLNEVMASYQQIFNVR
Ga0307498_100143041	3300031170	Soil	PRHQELYKKDFVFVNPASIGPNLNELIASYQQIFNVR
Ga0310813_109820751	3300031716	Soil	RKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR
Ga0307473_106095763	3300031820	Hardwood Forest Soil	TLRKGVKQIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFNIR
Ga0310912_104558083	3300031941	Soil	PRITLRKGIKQILRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNVR
Ga0310884_106685191	3300031944	Soil	KQIPRHQELYKKDFVFVNPASIGPNLNELITSYQQIFNVR
Ga0326597_121851301	3300031965	Soil	MAQQIPRMTLRKGIKQIPRHQELYKKDFVFVKPAFIGPNLNELTASYQQIFNVRYY
Ga0307470_101533493	3300032174	Hardwood Forest Soil	QIPRHQELYKKDFVFVNPASIGANLNELIASYQQVFDVR
Ga0307470_111646281	3300032174	Hardwood Forest Soil	RHQDLYKKEFVFVNPASIGPNLNELMATYQQIFNVR
Ga0310896_105574482	3300032211	Soil	QQVPRITLRKGVKQIPRHQELYKKEFVFVNPAYLGANLTDLIASYQQVFNLR
Ga0335084_105250293	3300033004	Soil	QQIPRMTLRKGVKQIPRHQELYKKDFVFVNPASIGPNLNALVASYQQIFDVR
Ga0310810_103213541	3300033412	Soil	AQQIPRITLRKGIKQIPRHQELYKKEFVFVNPASIGPNLNDLIASYQQIFNIR
Ga0364946_000448_720_866	3300033815	Sediment	VTPERKGVKQIPRNQELYKKDFVFVSPASIGPNLKEMVASYQQIFDVR
Ga0364932_0238760_2_115	3300034177	Sediment	PRHQELYKKDFVFVNPAFIGPNLIELTASYQQIFNVR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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