NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075206

Metagenome / Metatranscriptome Family F075206

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075206
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 106 residues
Representative Sequence IRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPEWSGTVHSHIALYTDESPSTRFSAQDRIAMRLWYDRWHADGVFCLIYSAHDAHCEADGVAGGMHTKPRMVR
Number of Associated Samples 110
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.20 %
% of genes near scaffold ends (potentially truncated) 90.76 %
% of genes from short scaffolds (< 2000 bps) 91.60 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(30.252 % of family members)
Environment Ontology (ENVO) Unclassified
(27.731 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(39.496 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.74%    β-sheet: 14.81%    Coil/Unstructured: 64.44%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF04173DoxD 26.05
PF00326Peptidase_S9 11.76
PF07681DoxX 6.72
PF01432Peptidase_M3 3.36
PF04264YceI 3.36
PF10282Lactonase 2.52
PF00365PFK 1.68
PF00805Pentapeptide 0.84
PF13200DUF4015 0.84
PF02239Cytochrom_D1 0.84
PF02897Peptidase_S9_N 0.84
PF02412TSP_3 0.84
PF00069Pkinase 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 32.77
COG4270Uncharacterized membrane proteinFunction unknown [S] 6.72
COG0339Zn-dependent oligopeptidase, M3 familyPosttranslational modification, protein turnover, chaperones [O] 3.36
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.36
COG1164Oligoendopeptidase FAmino acid transport and metabolism [E] 3.36
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 3.36
COG02056-phosphofructokinaseCarbohydrate transport and metabolism [G] 1.68
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 0.84
COG1505Prolyl endopeptidase PreP, S9A serine peptidase familyAmino acid transport and metabolism [E] 0.84
COG1770Protease IIAmino acid transport and metabolism [E] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_120770306All Organisms → cellular organisms → Bacteria1531Open in IMG/M
3300003323|rootH1_10321503All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300003993|Ga0055468_10045001All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1100Open in IMG/M
3300003996|Ga0055467_10026243All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1356Open in IMG/M
3300004013|Ga0055465_10039243All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300004114|Ga0062593_100660246All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1011Open in IMG/M
3300004778|Ga0062383_10132523All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1100Open in IMG/M
3300004782|Ga0062382_10448878All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium614Open in IMG/M
3300004808|Ga0062381_10074346All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1016Open in IMG/M
3300005343|Ga0070687_101112055All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium578Open in IMG/M
3300005445|Ga0070708_100778755All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium899Open in IMG/M
3300005518|Ga0070699_100786100All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium871Open in IMG/M
3300005539|Ga0068853_102252856All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium528Open in IMG/M
3300005549|Ga0070704_101746585All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium575Open in IMG/M
3300005552|Ga0066701_10328695All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium948Open in IMG/M
3300005558|Ga0066698_10134146All Organisms → cellular organisms → Bacteria1661Open in IMG/M
3300005840|Ga0068870_10329988All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium972Open in IMG/M
3300005889|Ga0075290_1000381All Organisms → cellular organisms → Bacteria5091Open in IMG/M
3300005937|Ga0081455_10065333All Organisms → cellular organisms → Bacteria3043Open in IMG/M
3300006173|Ga0070716_101568705All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium540Open in IMG/M
3300006844|Ga0075428_100943601All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium914Open in IMG/M
3300006845|Ga0075421_101757376All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium669Open in IMG/M
3300006914|Ga0075436_101509965All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium510Open in IMG/M
3300007004|Ga0079218_13304784All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium546Open in IMG/M
3300009147|Ga0114129_10784777All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300009148|Ga0105243_12987185All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium513Open in IMG/M
3300009157|Ga0105092_10097171All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1613Open in IMG/M
3300009171|Ga0105101_10145008All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300009817|Ga0105062_1044952All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium799Open in IMG/M
3300009840|Ga0126313_11339887All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium592Open in IMG/M
3300010039|Ga0126309_10091010All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1552Open in IMG/M
3300010041|Ga0126312_11459808All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium507Open in IMG/M
3300010396|Ga0134126_10428666All Organisms → cellular organisms → Bacteria1533Open in IMG/M
3300011431|Ga0137438_1262031All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium517Open in IMG/M
3300012043|Ga0136631_10155213All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium885Open in IMG/M
3300012355|Ga0137369_10998043All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium555Open in IMG/M
3300012679|Ga0136616_10059438All Organisms → cellular organisms → Bacteria1831Open in IMG/M
3300012684|Ga0136614_10089839All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2329Open in IMG/M
3300012684|Ga0136614_11073046All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium552Open in IMG/M
3300012907|Ga0157283_10230276All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium603Open in IMG/M
3300012908|Ga0157286_10262949All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium614Open in IMG/M
3300012912|Ga0157306_10485034All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium504Open in IMG/M
3300012916|Ga0157310_10067173All Organisms → cellular organisms → Bacteria → Acidobacteria1080Open in IMG/M
3300012957|Ga0164303_10385513All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium860Open in IMG/M
3300012958|Ga0164299_11649486All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium507Open in IMG/M
3300012960|Ga0164301_11682863All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium529Open in IMG/M
3300012975|Ga0134110_10302856All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium690Open in IMG/M
3300012985|Ga0164308_11675138All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium589Open in IMG/M
3300012986|Ga0164304_10392257All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium984Open in IMG/M
3300012989|Ga0164305_10269255All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300013096|Ga0157307_1192068All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium501Open in IMG/M
3300014268|Ga0075309_1055483All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium910Open in IMG/M
3300014326|Ga0157380_10928880All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium898Open in IMG/M
3300015371|Ga0132258_11266264All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1864Open in IMG/M
3300015373|Ga0132257_100212181All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2299Open in IMG/M
3300017787|Ga0183260_10015745All Organisms → cellular organisms → Bacteria → Proteobacteria5797Open in IMG/M
3300018028|Ga0184608_10079994All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1338Open in IMG/M
3300018056|Ga0184623_10029485All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium2466Open in IMG/M
3300018070|Ga0184631_10142945All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium960Open in IMG/M
3300018074|Ga0184640_10211312All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium877Open in IMG/M
3300018076|Ga0184609_10086597All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1391Open in IMG/M
3300018422|Ga0190265_10007539All Organisms → cellular organisms → Bacteria7898Open in IMG/M
3300018422|Ga0190265_11812623All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium718Open in IMG/M
3300018429|Ga0190272_10005402All Organisms → cellular organisms → Bacteria6068Open in IMG/M
3300018429|Ga0190272_10117360All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1754Open in IMG/M
3300018429|Ga0190272_11581503All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium671Open in IMG/M
3300018920|Ga0190273_11446174All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium603Open in IMG/M
3300019487|Ga0187893_10520718All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium771Open in IMG/M
3300019881|Ga0193707_1032633All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300021073|Ga0210378_10257140All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium660Open in IMG/M
3300021078|Ga0210381_10126149All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium852Open in IMG/M
3300021080|Ga0210382_10045063All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300021080|Ga0210382_10092729All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300022534|Ga0224452_1277942All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium511Open in IMG/M
3300022756|Ga0222622_10494883All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium873Open in IMG/M
3300025552|Ga0210142_1080820All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium637Open in IMG/M
3300025908|Ga0207643_10560348All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium734Open in IMG/M
3300025912|Ga0207707_11215828All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium609Open in IMG/M
3300025932|Ga0207690_10288348All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1280Open in IMG/M
3300025953|Ga0210068_1067965All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium557Open in IMG/M
3300026003|Ga0208284_1001386All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1830Open in IMG/M
3300027743|Ga0209593_10165810All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium788Open in IMG/M
3300027778|Ga0209464_10101909All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium984Open in IMG/M
3300027843|Ga0209798_10417531All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium625Open in IMG/M
3300027882|Ga0209590_10562739All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium734Open in IMG/M
3300028380|Ga0268265_11462941All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium686Open in IMG/M
3300028587|Ga0247828_11151778All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium516Open in IMG/M
3300028592|Ga0247822_10137661All Organisms → cellular organisms → Bacteria1788Open in IMG/M
3300028719|Ga0307301_10323196All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium507Open in IMG/M
3300028784|Ga0307282_10107105All Organisms → cellular organisms → Bacteria1302Open in IMG/M
3300028784|Ga0307282_10355883All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium708Open in IMG/M
3300028793|Ga0307299_10170683All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium819Open in IMG/M
3300028799|Ga0307284_10311593All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium633Open in IMG/M
3300028803|Ga0307281_10358583All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium552Open in IMG/M
3300028811|Ga0307292_10482575All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium531Open in IMG/M
3300028812|Ga0247825_10563286All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium814Open in IMG/M
3300028814|Ga0307302_10066984All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300028824|Ga0307310_10375146All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium702Open in IMG/M
3300028872|Ga0307314_10045218All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300028872|Ga0307314_10110838All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium759Open in IMG/M
3300028881|Ga0307277_10040379All Organisms → cellular organisms → Bacteria1882Open in IMG/M
3300028885|Ga0307304_10245785All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium778Open in IMG/M
3300028885|Ga0307304_10250640All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium771Open in IMG/M
3300030336|Ga0247826_11362818All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium572Open in IMG/M
3300030606|Ga0299906_10630756All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium810Open in IMG/M
3300030620|Ga0302046_11241261All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium585Open in IMG/M
3300031114|Ga0308187_10499616All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium500Open in IMG/M
3300031229|Ga0299913_10463845All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1253Open in IMG/M
3300031716|Ga0310813_11541105All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium620Open in IMG/M
3300031731|Ga0307405_11501970All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium592Open in IMG/M
3300031824|Ga0307413_10190090All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1473Open in IMG/M
3300031824|Ga0307413_11422796All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium610Open in IMG/M
3300031901|Ga0307406_11398467All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium613Open in IMG/M
3300031996|Ga0308176_10008464All Organisms → cellular organisms → Bacteria7038Open in IMG/M
3300032000|Ga0310903_10018276All Organisms → cellular organisms → Bacteria2325Open in IMG/M
3300032002|Ga0307416_100239974All Organisms → cellular organisms → Bacteria1755Open in IMG/M
3300032074|Ga0308173_12192858All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium521Open in IMG/M
3300032126|Ga0307415_101225852All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium708Open in IMG/M
3300033551|Ga0247830_10194580All Organisms → cellular organisms → Bacteria1510Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil30.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.04%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment4.20%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand4.20%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.20%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.20%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.36%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.36%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.52%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.52%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.68%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.68%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.68%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.84%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.84%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.84%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.84%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.84%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.84%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.84%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.84%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300004808Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1FreshEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005889Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009171Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300012043Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012679Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)EnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017787Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018070Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025552Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025953Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026003Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)EnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027843Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_12077030613300002568SoilEASVAAQQERVACLSAEVRHDSVFVLRVLPLEVPGDSMTIGADESIERCGPPSWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQHWHVDGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
rootH1_1032150313300003323Sugarcane Root And Bulk SoilVLITRAKPLPPEAADSLGISATASVDQCGPPVWSGTVHTHVALYTDDLPSTKFSAQDRTAMRLWYDRWHADGVFCLLYSREDAHCEADGVVGGLRSRPRYVQ*
Ga0055468_1004500123300003993Natural And Restored WetlandsCLAADIRGDTVFVSRVHRVSPDAADSMGVSATASIEQCGPPEWDGTVHTHVALYTDDSPSQRFSGQDRTAMQMWYDRWRADGVFCVAYSEQSAHCEADGVVGGMRSRPRYVH*
Ga0055467_1002624323300003996Natural And Restored WetlandsGDTVFVSRVHRVSPDAADSMGVSATASIEQCGPPEWDGTVHTHVALYTDDSPSQRFSGQDRTAMQMWYDRWRADGVFCVAYSEQSAHCEADGVVGGMRSRPRYVH*
Ga0055465_1003924313300004013Natural And Restored WetlandsQERVACLAAEVRNDSVFVVRVLPLEISGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVGYSRRDAHCEADGVIGGVRSQPSVTR*
Ga0062593_10066024623300004114SoilSSIRNDTVFVTSVVPLEPEGADSMGISATRSVEECGPPRWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWHSDGVFCLIYSARDAHCEADGVVGGMRQKGR*
Ga0062383_1013252323300004778Wetland SedimentACLGAAIRNDTVFVDHILALAPQEADSMSISATASVERCGPPEWQGTVHTHVALYTAELPSKRFSAQDRGVMRQWYGRWNADGVFCVVYSRRDAHCEADGVIGGLRSPPIIVR*
Ga0062382_1044887823300004782Wetland SedimentEERVACLGASVRNDTVFVSRILALGPQEADSMSISAETSIDRCGPPEWSGTVHTHVALYTAELPSTRFSAQDRGVMRRWYERWHADGVFCVAYSPRNAHCEADGVAGGMRSPPTITH*
Ga0062381_1007434613300004808Wetland SedimentERVACLASTIRNDTVFVSRIDPLEPEDADSMGISATASIGRCGPPEWSGTVHSHIALYTDDQPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSPHDAHCEADGVVGGMRTKPQMVR*
Ga0070687_10111205523300005343Switchgrass RhizosphereAADIRGDTVFVSRVQRVSPDAADSMGVSATASIEQCGPPEWDGTVHTHVALYTDDSPSQRFSGQDRTAMQMWYDRWHTDGVFCVAYSEQSAHCEADGVVGGMRSRPRDVH*
Ga0070708_10077875513300005445Corn, Switchgrass And Miscanthus RhizosphereCLAASIRNDTVFVNRILPLPPEEADSMGIASTSSVERCGPPEWSGTVHSHVYLFTDSLPSTRFSAQDRGVMRMWYERWHSDGVFCVVYSARDAHCEADGVVGGMRSRPRLVR*
Ga0070699_10078610013300005518Corn, Switchgrass And Miscanthus RhizosphereIRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPEWSGTVHSHIALYTDESPSTRFSAQDRIAMRLWYDRWHADGVFCLIYSAHDAHCEADGVAGGMHTKPRMVR*
Ga0068853_10225285623300005539Corn RhizosphereACLASTIRSDTVFVTRVSALEPEEADSMGISATTSVEHCGPPSWSGTVHTHIAMYSDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNQ*
Ga0070704_10174658513300005549Corn, Switchgrass And Miscanthus RhizosphereIRNDTVFVDRILALAPGEADSMSSSATASVERCGPPEWQGTVHTHVALYTDSLPSKRFSAQDRGVMHQWYQRWNADGVFCVVYSARDAHCEADGVVGGLRSPPIIR*
Ga0066701_1032869513300005552SoilALEPSEADSMSISAAASIERCGPPEWSGTVHTHVALYTADLPSTKFSAQDRGVMRQWYERWHADGVFCLVYSARSAHCEADGVVGGMRSRPVIVR*
Ga0066698_1013414613300005558SoilLWQASVQAHEERAACLGAIVREDTVFVSRILPLPPEEADSMAISATASIERCGPPAWAGSVHTHVAAYDGDRPSTRFSGQDRVVQRMWYDRWHSDGVFCVVYSEQDAHCEADGVVGGIRSRPHTVP*
Ga0068870_1032998813300005840Miscanthus RhizosphereRVACLSAEVRQDSVFVVRVLPLEVSGDSVTIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWDQRWRADGVFCGVYGRRDAHCEADGVIGGIRSEPSVTR*
Ga0075290_100038113300005889Rice Paddy SoilDTVFVSRILPLDPVEADSMGISSEASVERCGPPQWAGTVHTHVALYTDSLPSTRFSAQDRGVMSRWYERWHADGVFCVVYSAHDAHCEADGVVGGMHSRPRIVR*
Ga0081455_1006533343300005937Tabebuia Heterophylla RhizosphereDTVFVTRIRPVESEAADSMGISAVASVEKCGPPEWSGTVHTHIALYTDDRPSAKFSAQDRTAMRLWYDRWHADGVFCLVYSEEDAHCEADGVVGGMRSAPRYVR*
Ga0070716_10156870523300006173Corn, Switchgrass And Miscanthus RhizosphereRSILPLPPEAADSMAISATASIERCGPPDWAGTVHTHIAAYDGDRPSTRFSGQDRVVQRMWYNRWHSDGVFCVVYSEQDAHCEADGVVGGVRRSRPHTVP*
Ga0075428_10094360123300006844Populus RhizosphereVTRVRPLDPEDADSLGISAVASVEECGPPTWAGTVHTHIALYTDDLPSTRFSAQDRTAMRLWYDRWHSDGVFCLIYSRENAHCEADGVVGGLRSPPRVIR*
Ga0075421_10175737613300006845Populus RhizosphereEVRNDSVFVVRVLPLEISGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSVQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
Ga0075436_10150996523300006914Populus RhizosphereVVRNDSVFVSRILALVPQEADSMSIASAASIKRCGPPEWAGTVHTHVALYSDDLPSKRFSAQDRGVMRQWYERWHADGVFCVVYSARDAHCEADGVVGGMRARPRMMR*
Ga0079218_1330478413300007004Agricultural SoilVYVSAIEPLDPEGADSMGISAVASVERCGPPEWSGTVHTHIALYTEDRPSTRFSGQDRIAMRLWYDRWHSDAVFCLVYSDRHAHCEADGVVGGMRSTPRVIR*
Ga0114129_1078477713300009147Populus RhizosphereLRVLPLETSGADSMTIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYERWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
Ga0105243_1298718513300009148Miscanthus RhizosphereSTIRSDTVFVTRVSALEPEEADSMGISATRSVEQCGPPTWSGTVHTHIAMYSDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNQ*
Ga0105092_1009717113300009157Freshwater SedimentRGDTVFVNHVHRVTPDAADSMGVSATASIEQCGPPEWDGTVHTHVALYTEDSPSRRFSGQDRTVMQMWYHRWRTDGVFCVAYSEQSAHCEADGVVGGMHSRPRYVH*
Ga0105101_1014500813300009171Freshwater SedimentDADSMGISATRSVEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKGGTALRRPP*
Ga0105062_104495213300009817Groundwater SandREERAACLGATVRDGTVLVSRVLPLEPDAADSMGISAIASIERCGPPEWSGSVHTHVALYTEELPSTRFSGQDRVVMRMWYDRWHADGVFCLVYSEREAHCEADGVVGGIRSRPRLVR*
Ga0126313_1133988713300009840Serpentine SoilTRVTPLEPEDADSMGISATKSVDQCGPPTWSGTLHTHIAMYSDSLPSTRFSAQDRTAMRLWYDRWHANGVFCLIYSARDAHCEADGVAGGMRSQPRVVNE*
Ga0126309_1009101023300010039Serpentine SoilVSQIDPLEPEEADSMGILATASIDKCGPPEWSGTVHSHIALYTDELPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSAHDAHCEADGVVGGMRTRPLIVR*
Ga0126312_1145980813300010041Serpentine SoilLEPEEADSMGISATASVAQCGPPNWSGTVHTHVALYSEDLPSTKFSAQDRIAMRLWYDRWHADGVFCVVYSREDAHCEADGVAGGMRTKPGAVP*
Ga0134126_1042866613300010396Terrestrial SoilSVRNDTVFVARILALVADGADSMSIGSDASIERCGPPDWSGTVHTHVAAYDNDVPSTTFSAQDRGVMRRWYERWQADGVFCVVYSARDAHCEADGVVGGMRSRPSMK*
Ga0137438_126203113300011431SoilPEDADSMGISATRSVEQCGPPQWSGTVHSHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKAEGR*
Ga0136631_1015521313300012043Polar Desert SandSFIRNDTVFVTGIDPLEPEDADSMAISAIRSVERCSPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKAVGR*
Ga0137369_1099804323300012355Vadose Zone SoilADSMGIGSSESIERCGPPEWSGTVHTHVAMYSDSLPSTLFSAQDRGVMRRWYQRWHSDAVFCLLYSARDAHCEADGVVGGLRSRPTIVR*
Ga0136616_1005943813300012679Polar Desert SandIAPLEPEDADSMGVSAVASVERCGPPQWSGTVHSHIALYTEDSPSTRFSGQDRIAMRLWYDRWHSDGVFCLVYSDRQAHCEADGVIGGMRRGGKR*
Ga0136614_1008983923300012684Polar Desert SandVTAVAPLEPEDADSMGISATASVEQCGPPQWSGTVHTHIALYTDELPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVAGGMRRKAGRRLGG*
Ga0136614_1107304623300012684Polar Desert SandASSTRNDTVFVSAIAALEPVDADSMGISATASVERCGPPAWSGTVHTHVAMYTDDQPSTRFSGQDRVAMRLWYDRWRSDGVFCVVYSDRKAHCEADGIVGGMRSAPRVVR*
Ga0157283_1023027623300012907SoilLEPEEADSMGISATKSVEQCGPPAWSGTVHTHIAMYTDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNQ*
Ga0157286_1026294913300012908SoilEPEEADSMGISATKSVEQCGPPAWSGTVHTHIAMYTDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNQ*
Ga0157306_1048503413300012912SoilLASSIRNDTVFVTSVVPLEPEGADSMGISATRSVDACGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWQSDGVFCLIYSARDAHCEADGVVGGMRGNGGRAGRR*
Ga0157310_1006717333300012916SoilSGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
Ga0164303_1038551323300012957SoilVRNDSVFVLRVLPLETSGADSMTIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTSFSAQDRGVMRRWYERWRADGVFCVIYSRRDAHCEADGVVGGIRSQPSVTR*
Ga0164299_1164948623300012958SoilLETSAADSMTIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYKRWQADGVFCVVYSRRDAHCEADGVIGGIRSPPSVTR*
Ga0164301_1168286313300012960SoilDSLGISATASIDKCGPPEWSGTVHTHIALYTDSLPSTRFSAQDRTAMRLWYERWHSDGVFCLIYSAHDAHCEADGVVGGMRSQPRILPQ*
Ga0134110_1030285623300012975Grasslands SoilAAEEERVACLGASIRNDTVFVDRILALEPSEADSMSISAAASIERCGPPEWSGTVHTHVALYTADLPSTKFSAQDRGVMRQWYQRWHADGVFCLVYSARSAHCEADGVVGGMRSRPVIVR
Ga0164308_1167513813300012985SoilRVLPLETSGADSMTIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYERWRADGVFCVIYSRRDAHCEADGVVGGIRSQPSVTR*
Ga0164304_1039225713300012986SoilVARILVLVPDGADSMSISSDASIERCGPPEWSGTVHTHVAAYDHDLPSTIFSAQDRGVMRRWYQRWQADGVFCLIYSARDAHCEADGVVGGMRSRPTLR*
Ga0164305_1026925513300012989SoilEDADSLGISATASIDKCGPPEWSGTVHTHIALYTDSLPSTRFSAQDRTAMRLWYERWHSDGVFCLIYSAHDAHCEADGVVGGMRSQPRILPQ*
Ga0157307_119206823300013096SoilCIASTIRSDTVFVTRVSALEPEEADSMGISATKSVEQCGPPTWSGTVHTHIAMYTDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNQ*
Ga0075309_105548313300014268Natural And Restored WetlandsSVAAKEERVACLASSIRNDTVYVSAIEPLDPEGADSMGISAVASVERCGPPEWSGTVHTHIALYTEDSPSTRFSGQDRIAMRLWYDRWQSDAVFCLVYSDRHAHCEADGVVGGMRSKPRLR*
Ga0157380_1092888023300014326Switchgrass RhizosphereVSPDAADSMGVSATASIEQCGPPEWDGTVHTHVALYTDDSPSQRFSGQDRTAMQMWYDRWHTDGVFCVAYSEQSAHCEADGVVGGMRSRPRDVH*
Ga0132258_1126626423300015371Arabidopsis RhizosphereVACLAATVRNDTVFVARILALVAGGADSMSISSEASIDRCGPPDWAGTVHTHVAAYDNGVPSAMFSAQDRGVMRRWYERWQSDGVFCLVYSAEEAHCEADGVVGGMRSRPVVR*
Ga0132257_10021218133300015373Arabidopsis RhizosphereVACLAATVRNDTVFVARILALVAGGADSMSISSEASIDRCGPPDWAGTVHTHVAAYDNGVPSAMFSAQDRGVMRRWYERWQSDGVFCLVYSAEEAHCEADRVVGGMRSRPVVR*
Ga0183260_1001574563300017787Polar Desert SandVFVSAIAPLEPEDADSMGVSAVASVERCGPPQWSGTVHSHIALYTEDSPSTRFSGQDRIAMRLWYDRWHSDGVFCLVYSDRQAHCEADGVIGGMRRGGKR
Ga0184608_1007999423300018028Groundwater SedimentVFVTAIAPLEPEDADSMGISATRSVEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRR
Ga0184623_1002948533300018056Groundwater SedimentVFVTAIAPIEPEDADSMGISATRSVEQCGPPQWSGTVHTHIALYTDELPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKAGGR
Ga0184631_1014294513300018070Groundwater SedimentLASSIRNDTVFVTAIAPLEPEDADSMGISATHSVEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRSTRGRRR
Ga0184640_1021131213300018074Groundwater SedimentPDAADSMGVSATASIERCGPPEWDGTVHTHVALYTEEGPSRRFSGQDRTVMRMWYDRWHSDGVFCVVYSKRSAHCEADGIVGGLRSRPSVVR
Ga0184609_1008659723300018076Groundwater SedimentGDTVFVSRILRVEPDAADSMGISAIASIERCGPPEWDGTVHTHVALYTEDSPSRRFSGQDRIAMRMWYDRWRSDAVFCVVYSERSAHCEADGVVGGLRSRPRVVR
Ga0190265_1000753933300018422SoilVTAIAPLEPEDADSMGISATGSVEECGPPRWSGTVHTHITLYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKAGRR
Ga0190265_1181262323300018422SoilPAPLWAPYVFWMTQPQPVAAVAPVEPEDADSMGISAISSVERCGPPQWSGTVHSHVALYTEDLPSTRFSGQDRIAMRLWYDRWHADGVFCLVWSERDAHCEADGVVGGMRSAPQRVR
Ga0190272_1000540263300018429SoilVACLASSIRNDTVFVTAVAPLEPEGADSMGISATRSVEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLLYSDRDAHCEADGVVGGMRRKAAVGR
Ga0190272_1011736023300018429SoilVFVTAIAPLEPEDADSMGISATRSVEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKAGTR
Ga0190272_1158150323300018429SoilVTRILRVEPATADSMGISATASIEQCGPPEWNGTVHTHVALYTEDSPSRRFSGQDRTVMRMWYDRWHSDGVFCIVYSERSAHCEADGIVGGLRSRPRVR
Ga0190273_1144617413300018920SoilRILRIEPDAADSMGISAIASIERCGPPEWDGTVHTHVALYTEDSPSRRFSGQDRTVMRMWYDRWHSDGVFCIVYSERSAHCEADGIVGGLRSRPRVVR
Ga0187893_1052071813300019487Microbial Mat On RocksRVLRIEPDAADSMGISAVASIEGCGPPEWDGTVHTHVALYTEDSPSRRFSGQDRTVMRMWYDRWRSDGVFCVVYSERNAHCEADGVVGGRRSRPSIAP
Ga0193707_103263313300019881SoilAREERVACLASTIRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0210378_1025714013300021073Groundwater SedimentLAAEILGDTVFVSRILRVEPDAADSMGISATASIERCGPPEWDGTVHTHVALYTEDSPSRRFSGQDRTVMRMWYDRWRSDGVFCIVYSERSAHCEADGVVGGLRSRPRVVR
Ga0210381_1012614923300021078Groundwater SedimentCLASTIRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0210382_1004506313300021080Groundwater SedimentAQEERVACLASTIRNDTVFVSRVLPVDAEGADSMGIGSSESIERCGPPEWSGTVHTHVAMYSDSLPSTLFSAQDRGVMRRWYQRWHSDGVFCLLYSARDAHCEADGVVGGLRSRPTIVR
Ga0210382_1009272933300021080Groundwater SedimentPEDADSMGISATRSVEQCGPPQWSGTVHSHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRR
Ga0224452_127794223300022534Groundwater SedimentRNDTVFVTAIAPLEPEDADSMGISATRSVEQCGPPQWSGTVHTHIALYTDELPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRQR
Ga0222622_1049488323300022756Groundwater SedimentSLAARAERVACLASSIRNDTVFVTAIAPLEPEDADSMGISATRSVEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRR
Ga0210142_108082013300025552Natural And Restored WetlandsKRILPLPPEEADSMGISSTSSVVRCGPPEWSGTVHTHVYLFTDSSPSTTFSVQDRGVMRMWYERWHSDGVFCLVYSARDAHCEADGVVGGMHAPPRIVR
Ga0207643_1056034823300025908Miscanthus RhizosphereFVSRVSALKPEEADSMGISATTSVEHCGPPTWSGTVHTHIAMYSDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNE
Ga0207707_1121582813300025912Corn RhizosphereARQERVACLAAEVRNDSVFVVRVLPLEISGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR
Ga0207690_1028834833300025932Corn RhizosphereRVLPLEISGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR
Ga0210068_106796513300025953Natural And Restored WetlandsVSRVLPLPAEAADSMGVSATSAIERCGPPEWSGTVHTHIALYSAEGPSRRFSGQDRVVMRMWYDRWHTDGVFCLVYSERDANCEADGVVGGLRSRPRLVR
Ga0208284_100138613300026003Rice Paddy SoilRNDTVFVSRILALAPEGADSMSIASEASVARCGPPEWSGTLHTHVALYTAELPSTRFSAQDRGVMRRWYERWHADGVFCVVYSAHDAHCEADGVVGGMHSRPRIVR
Ga0209593_1016581013300027743Freshwater SedimentADSTGISAQESIDQCGPPTWSGTVHTHVALYTDDSPSRRFSGQDRVAMSLWYDRWHADGVFCVIWSDRDAHCEADGVVGGLRSRPRTAQ
Ga0209464_1010190923300027778Wetland SedimentERVACLASTIRNDTVFVSRIDPLEPEDADSMGISATASIGRCGPPEWSGTVHSHIALYTDDQPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSPHDAHCEADGVVGGMRTKPQMVR
Ga0209798_1041753123300027843Wetland SedimentERVACLGAAIRNDTVFVDHILALAPQEADSMSISATASVERCGPPEWQGTVHTHVALYTAELPSKRFSAQDRGVMRQWYGRWNADGVFCVVYSRRDAHCEADGVIGGLRSPPIIVR
Ga0209590_1056273923300027882Vadose Zone SoilVFVSRILPLDAEGADSMGIGSTESIERCGPPEWSGTVHTHVAMYSDTLPSTRFSAQDRGVMQRWYQRWHADGVFCLVYSARDAHCEADGVVGGLRSRPTIVR
Ga0268265_1146294113300028380Switchgrass RhizosphereEVRNDSVFVVRVLPLEISGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR
Ga0247828_1115177823300028587SoilTRVSALEPEEADSMGISATTSVEHCGPPSWSGTVHTHIAMYSDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRTQPRVVNE
Ga0247822_1013766133300028592SoilLAARQERVACLATEVRNDSVFVVRVLPLEISGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR
Ga0307301_1032319623300028719SoilDTVFVDRILALAPEEADSMSSSATASVERCGPPEWQGTVHTHVALYDDSLPSRRFSARDRGVMRQWYGQWNADGVFCLIYSARDAHCEADGVVGGLRSRPAIVR
Ga0307282_1010710513300028784SoilVFVSRIDPVEPEEADSMGISATASIDRCGPPQWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSAHDAHCEADGVMGGMRTRPHLVR
Ga0307282_1035588323300028784SoilSSIRNDTVFVTAIAPLEPEDADSMGISATRSVEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVDGMRRR
Ga0307299_1017068323300028793SoilSTIRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPAWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0307284_1031159323300028799SoilSLAAREERVACLASTIRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPEWSGTVHSHIALYTDESPSTRFSAQDRTAIRLWYDRWHADGVFCLIYSAHDAHCEADGVAGGMHTKPHLVR
Ga0307281_1035858313300028803SoilSLAARAERVACLASSIRNDTVFVTAIAPLEPEDADSMGISATRSVEQCGPPQWSGTVHSHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKAEG
Ga0307292_1048257513300028811SoilLAPEEADSMSISSTASVERCGPPEWQGTVHTHVALYTDSLPSKRFSAQDRGVMHQWYGRWNADGVFCVVYSAHDAHCEADGVVGGLRSRPIIVR
Ga0247825_1056328613300028812SoilEVRNDSVFVVRVLPLEISGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSEPSVTR
Ga0307302_1006698433300028814SoilKASLAAREERVACLASTIRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPSWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0307310_1037514613300028824SoilDSMGISATASIDRCGPPQWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSAHDAHCEADGVAGGMHTRPHIVR
Ga0307314_1004521813300028872SoilAAREERVACLASTIRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0307314_1011083823300028872SoilLPLEAEGADSMGIGSSESIRRCGPPEWSGTVHTHVAMYSDSLPSTLFSAQDRGVMRRWYQRWHSDGVFCLLYSARDAHCEADGVVGGLRSRPTIVR
Ga0307277_1004037933300028881SoilEEADSMGISAIASIERCGPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0307304_1024578513300028885SoilACLASTVRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0307304_1025064023300028885SoilLASTIRNDTVFVSRIDPLEPEEADSMGISATASIERCGPPEWSGTVHSHIALYTDESPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSAHDAHCEADGVAGGMHTRPHIVR
Ga0247826_1136281813300030336SoilVFVSHVRQVSPDAADSLGVSATASIEQCGPPEWDGTVHTHVALYTDDSPSQRFSGQDRTAMQMWYDRWHADGVFCVAYSKQSAHCEADGVVGGMRSRPRYVH
Ga0299906_1063075613300030606SoilAGCLASSIRNDTVFVSAVAPLEPEEADSMSISAIASVERCGPPQWSGTVHTHIALYTDDSPSTRFSGQDRIAMRLWYDRWQSDGVFCVIYSEENAHCEADGVAGGMRRGKAVRR
Ga0302046_1124126123300030620SoilSAVAPLEPEEADSMSISAIASVERCGPPQWSGTVHTHIALYTDDSPSTRFSGQDRIAMRLWYDRWQSDGVFCVIYSEENAHCEADGVAGGMRRGKAVRR
Ga0308187_1049961613300031114SoilTVFVERILALMPHEADSMSIGSASSIERCGPPDWSGTVHSHVALYTAESPSKRFSAQDRGVMRQWYERWKMDGVFCLIYSARDAHCEADGVVGGMRSRPVIVR
Ga0299913_1046384523300031229SoilDTVFVTRVLRVEPDAADSMGVSATASIERCGPPDWDGTVHTHVALYTEESPSRRFSGQDRAVMRMWYDRWRADAVFCVAYSERSAHCEADGVVGGLRSRPRYVH
Ga0310813_1154110513300031716SoilMVKSEEADSLGISARASVEQCGPPAWSGTVHTHIALYSDSLPSTRFSAQDRAAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNE
Ga0307405_1150197013300031731RhizosphereAALEPEQADSMGISALASVEQCGPPAWSGTVHTHIALYTEDSPSSRFSGQDRVAMRLWYDRWHSDGVFCLIYSDRNAHCEADGVVGGMRRGVGREVLRR
Ga0307413_1019009033300031824RhizosphereVSRILALQPDQADSMSIASESSVERCGPPEWAGTLHTHVALYTAELPSTRFSAQDRGVMLRWYQRWRSDGVFCVVYSARDAHCEADGVVGGMRRTPPTMAR
Ga0307413_1142279613300031824RhizosphereTSVAAREERVACLASTIRNDTVWVNRVTPVEPEEADSMGISAVASVDQCGPPEWSGTVHTHIALYTDDLPSTKFSAQDRVAMRLWYDRWHADGVFCVVYSPEDAHCEADGVVGGLRSRPRAVH
Ga0307406_1139846713300031901RhizosphereQSLAAQQERAACLGASIRNDTVFVDHILALAPEEADSMSISAAASVERCGPPAWQGTVHTHVALYTDSLPSKRFSAQDRGVMRQWYARWNADGVFCLVYSATDAHCEADGVVGGMRSRPILVR
Ga0308176_1000846413300031996SoilCLGATVRNDTVFVARILALVPDGADSMSIGSDVSIARCGPPEWKGTVHTHVAAYDNDLPSTTFSAQDRGVMRRWYQRWQADGVFCVAYSAKDAHCEADGVVGGMRAPPVLK
Ga0310903_1001827613300032000SoilVASREERVACLASTIRSDTVFVTRVSALEPEEADSMGISATTSVEHCGPPSWSGTVHTHIAMYSDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRTQPRVVNE
Ga0307416_10023997413300032002RhizosphereSMAARQERVACLAAEVRNDSVFVVRVLPLEISGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVT
Ga0308173_1219285813300032074SoilRILALVPDGADSMSIGSDVSIARCGPPEWKGTVHTHVAAYDNDLPSTTFSAQDRGVMRRWYQRWQADGVFCVAYSAKDAHCEADGVVGGMRAPPVLK
Ga0307415_10122585213300032126RhizosphereSVAAGEERVACLASSIRNDSVFVSGIAPLEPEQADSMGISAVASVEKCGPPAWSGTVHTHIALYTDDSPSTRFSGQDRVAMRLWYDRWHSDGVFCLIYSDRHAHCEADGVVGGMRSRPRAVH
Ga0247830_1019458013300033551SoilSVFVVRVLPLEVSGDSMAIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSEPSVTR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.