Metagenome / Metatranscriptome Family F075198

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075198
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	74 residues
Representative Sequence	LSDDIRPVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRI
Number of Associated Samples	101
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.80 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.235 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (12.605 % of family members)
Environment Ontology (ENVO)	Unclassified (21.849 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.782 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.71% β-sheet: 0.00% Coil/Unstructured: 71.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04069	OpuAC	57.14
PF03706	LPG_synthase_TM	11.76
PF01569	PAP2	6.72
PF06293	Kdo	2.52
PF13551	HTH_29	0.84
PF14333	DUF4389	0.84
PF01163	RIO1	0.84
PF00528	BPD_transp_1	0.84
PF04024	PspC	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	11.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.67 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.67 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.06 %
Unclassified	root	N/A	11.76 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	3.36 %

Name	Rank	Taxonomy	Distribution
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	19.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	17.65 %
Unclassified	root	N/A	11.76 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	2.52 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.84 %

Name	Rank	Taxonomy	Distribution
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	19.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.65 %
Unclassified	root	N/A	11.76 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2.52 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples	0.84 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.65 %
Unclassified	root	N/A	11.76 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	2.52 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	2.52 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2.52 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.84 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	0.84 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.65 %
Unclassified	root	N/A	11.76 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	2.52 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	2.52 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2.52 %
Modestobacter marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter marinus	0.84 %
Actinomycetospora cinnamomea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora cinnamomea	0.84 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10164759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300001454\|JGI20204J15135_1020730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300003219\|JGI26341J46601_10035179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1616	Open in IMG/M
3300003368\|JGI26340J50214_10011587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2782	Open in IMG/M
3300004633\|Ga0066395_10040808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2001	Open in IMG/M
3300004633\|Ga0066395_10686344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300005178\|Ga0066688_10860998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300005332\|Ga0066388_106929110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300005363\|Ga0008090_15812834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300005364\|Ga0070673_100980850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	786	Open in IMG/M
3300005435\|Ga0070714_100827086	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005435\|Ga0070714_101133706	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005436\|Ga0070713_100401603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1280	Open in IMG/M
3300005437\|Ga0070710_10524439	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005440\|Ga0070705_101523936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	561	Open in IMG/M
3300005467\|Ga0070706_101614299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300005578\|Ga0068854_101254926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300005841\|Ga0068863_101668950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300005950\|Ga0066787_10094182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → Modestobacter marinus	631	Open in IMG/M
3300006031\|Ga0066651_10600472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300006174\|Ga0075014_100404996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	744	Open in IMG/M
3300006175\|Ga0070712_100028889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	3713	Open in IMG/M
3300006175\|Ga0070712_101066720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	700	Open in IMG/M
3300006797\|Ga0066659_10727093	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300006804\|Ga0079221_11495722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	542	Open in IMG/M
3300007265\|Ga0099794_10663658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300009521\|Ga0116222_1023409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	2779	Open in IMG/M
3300009522\|Ga0116218_1145690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300009522\|Ga0116218_1346299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300009524\|Ga0116225_1013085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4445	Open in IMG/M
3300009524\|Ga0116225_1105663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1304	Open in IMG/M
3300009525\|Ga0116220_10118723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1127	Open in IMG/M
3300009552\|Ga0116138_1138398	Not Available	672	Open in IMG/M
3300010043\|Ga0126380_10238283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300010047\|Ga0126382_10008172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4895	Open in IMG/M
3300010047\|Ga0126382_11117837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300010047\|Ga0126382_12386759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300010048\|Ga0126373_12718010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300010335\|Ga0134063_10497707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300010358\|Ga0126370_10803639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300010360\|Ga0126372_10760205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300010361\|Ga0126378_10499755	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300010361\|Ga0126378_10845305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300010362\|Ga0126377_11040495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	886	Open in IMG/M
3300010366\|Ga0126379_12616030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300010376\|Ga0126381_101514379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	969	Open in IMG/M
3300010379\|Ga0136449_101696996	Not Available	952	Open in IMG/M
3300010398\|Ga0126383_10596927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1175	Open in IMG/M
3300012476\|Ga0157344_1010918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300012930\|Ga0137407_10312010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1440	Open in IMG/M
3300012957\|Ga0164303_10203034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300012977\|Ga0134087_10158021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	991	Open in IMG/M
3300014165\|Ga0181523_10428449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	735	Open in IMG/M
3300014165\|Ga0181523_10646976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300014491\|Ga0182014_10005403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14194	Open in IMG/M
3300014499\|Ga0182012_10959474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300014501\|Ga0182024_10233614	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
3300015371\|Ga0132258_12430982	Not Available	1312	Open in IMG/M
3300015372\|Ga0132256_102888386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300015372\|Ga0132256_103205545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300017926\|Ga0187807_1131276	Not Available	796	Open in IMG/M
3300017937\|Ga0187809_10404102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300017955\|Ga0187817_10079380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2050	Open in IMG/M
3300017955\|Ga0187817_11053207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300017993\|Ga0187823_10171354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300017994\|Ga0187822_10407209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	503	Open in IMG/M
3300017995\|Ga0187816_10183013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	910	Open in IMG/M
3300018001\|Ga0187815_10239921	Not Available	767	Open in IMG/M
3300018001\|Ga0187815_10250342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	750	Open in IMG/M
3300018013\|Ga0187873_1216628	Not Available	713	Open in IMG/M
3300018033\|Ga0187867_10272898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300018038\|Ga0187855_10615315	Not Available	633	Open in IMG/M
3300018431\|Ga0066655_10308682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1031	Open in IMG/M
3300018482\|Ga0066669_10298293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300020581\|Ga0210399_10173658	Not Available	1787	Open in IMG/M
3300020582\|Ga0210395_11445846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300020583\|Ga0210401_10551626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300021178\|Ga0210408_10221313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1506	Open in IMG/M
3300021178\|Ga0210408_10290395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1303	Open in IMG/M
3300021178\|Ga0210408_10591485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300021403\|Ga0210397_11472475	Not Available	529	Open in IMG/M
3300021477\|Ga0210398_10149841	Not Available	1898	Open in IMG/M
3300021478\|Ga0210402_10344319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1382	Open in IMG/M
3300025898\|Ga0207692_10146244	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300025903\|Ga0207680_10771657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	689	Open in IMG/M
3300025915\|Ga0207693_10111070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2150	Open in IMG/M
3300025915\|Ga0207693_10370068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1121	Open in IMG/M
3300025939\|Ga0207665_10592026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300025949\|Ga0207667_10096401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	3052	Open in IMG/M
3300026023\|Ga0207677_11096603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	725	Open in IMG/M
3300026331\|Ga0209267_1250073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300027497\|Ga0208199_1033202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300027497\|Ga0208199_1073333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300027696\|Ga0208696_1066307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1236	Open in IMG/M
3300027905\|Ga0209415_10205083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1854	Open in IMG/M
3300027910\|Ga0209583_10057802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1386	Open in IMG/M
3300028023\|Ga0265357_1026457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300028759\|Ga0302224_10177015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300028782\|Ga0307306_10108588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300028791\|Ga0307290_10169993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300029882\|Ga0311368_10059659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3432	Open in IMG/M
3300030013\|Ga0302178_10074509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1796	Open in IMG/M
3300030058\|Ga0302179_10220293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	838	Open in IMG/M
3300030494\|Ga0310037_10028692	Not Available	2676	Open in IMG/M
3300031474\|Ga0170818_103190719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300031525\|Ga0302326_11851739	Not Available	787	Open in IMG/M
3300031716\|Ga0310813_11796150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	576	Open in IMG/M
3300031718\|Ga0307474_10188882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1565	Open in IMG/M
3300031754\|Ga0307475_11263713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300031771\|Ga0318546_10787366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora cinnamomea	669	Open in IMG/M
3300031781\|Ga0318547_10982013	Not Available	528	Open in IMG/M
3300031823\|Ga0307478_10081391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2473	Open in IMG/M
3300031823\|Ga0307478_10966879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300031890\|Ga0306925_10284774	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300032074\|Ga0308173_10974251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300032160\|Ga0311301_10024134	All Organisms → cellular organisms → Bacteria	16622	Open in IMG/M
3300032160\|Ga0311301_10460813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1908	Open in IMG/M
3300032770\|Ga0335085_12318270	Not Available	537	Open in IMG/M
3300034817\|Ga0373948_0195073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	526	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.92%
Host-Associated	Host-Associated	10.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.95%
Aquatic	Environmental → Aquatic	15.97%
Plants	Host-Associated → Plants	10.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.75%
Freshwater	Environmental → Aquatic → Freshwater	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Peat	Environmental → Terrestrial → Peat	4.20%
Sediment	Environmental → Aquatic → Sediment	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	12.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.08%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.24%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.84%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.84%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_101647591	3300001356	Peatlands Soil	LGDDIRPVAAGNGLASLAPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAG
JGI20204J15135_10207302	3300001454	Arctic Peat Soil	LGDDIRPVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFL
JGI26341J46601_100351794	3300003219	Bog Forest Soil	LGDDIRPVAAGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRAST
JGI26340J50214_100115873	3300003368	Bog Forest Soil	LGDDIRRVAAGNGRASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRID
Ga0066395_100408081	3300004633	Tropical Forest Soil	LSDNVWPVATGDGRSSPPPGTATGKAHRQRRPTGAPPPLPHRVTITTTAWLILGALVLAGAFVATQRTPWLRVD
Ga0066395_106863441	3300004633	Tropical Forest Soil	LSKDIEPVATQDHQAIRPPGSAVHKTRRQRRPTGAPPPLPHPITITTTAWLVLAALVVAGAFAASQHTPWL
Ga0066688_108609981	3300005178	Soil	VSDDIRRVIAADGRASLPSGQVPRTTRRQRRPTGARPPLPHPITITTTAWLILGAVVLAGAFLASQHT
Ga0066388_1069291101	3300005332	Tropical Forest Soil	VSKDIEPVATQDHQAIRPPGSAVHKTRRQRRPTGAPPPLPHPVTITTTAWLIFAALVVAGAFAASQHT
Ga0008090_158128341	3300005363	Tropical Rainforest Soil	LSKDIEPVATKDYQVIRPPDSAVHKTRRQRRPTGAPPPLPHPVTITTTAWLVVGALVLAGAFVATQQTPWLRVDDRASAWVL
Ga0070673_1009808502	3300005364	Switchgrass Rhizosphere	LSEHIGRAVAGNGRASVPPGPAVRKARRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVIAGAFLAAKHTPWLRVDDRFST
Ga0070714_1008270862	3300005435	Agricultural Soil	VSDDIRRVIAADGRASLPSGQVPRTTRRQRRPTGAPPPLPHPITITTTAWLILGAVVLAGAFLASQ
Ga0070714_1011337061	3300005435	Agricultural Soil	VSENTEAVISRDGPDGLPPSSAVHRTRRQRRPTGAPPPLPHPITITTTAWLILGAVVLAGAFLASQ
Ga0070713_1004016032	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LSKDIKPVATYDGQAARPPGSVAGKARRQRRPTGAPPPLRHPVTITTTAWLILGAVAIAGAFLAAQHTPWLRIDDR
Ga0070710_105244391	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LSQDIGRVIAGDGPASSPPGPAINKTRRQRRPTGAPPPLPHPVAITTTVWLVLVAVVLAGAFVASQHTPWLRIDDRVSTWVL
Ga0070705_1015239361	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LSQDIGRVIAGDGPASSPPGPAINKTRRQRRPTGAPPPLPHPVAITTTVWLVLMAVVLAGAFVASQHTPW
Ga0070706_1016142991	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LSEHIGRTVAGDGRATVPPGPAVRKARRQRRPTGAPPPLPHPFAVSTAAWLVLGAAVIAGAFLASQHTPWLRVDD
Ga0068854_1012549262	3300005578	Corn Rhizosphere	LSEHIGRAVAGDGRATVPPGPAVRKGRRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVLAGAFLASQHTPW
Ga0068863_1016689501	3300005841	Switchgrass Rhizosphere	LSQDIGRVIAGDSPASSAPGPATQKTRRQRRPTGAPPPLPHPVAITTTVWLVLMAVVLAGAFVASQHTPWLRIDDRVSTWV
Ga0066787_100941821	3300005950	Soil	LSDDIRPVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRI
Ga0066651_106004722	3300006031	Soil	LSQDIGRVIAGDGPASSPPGPAIHKTRRQRRPTGAPPPLPHPVAITTMVWLALVAVVLAGAFVASQHTPWL
Ga0075014_1004049962	3300006174	Watersheds	VSTSLPPGPAVQKDRRQRRPTGAPPPLPHPLTITTTAWLILGAVVLAGAFLAAQHTPWLRIDDRASTWVLRLLAGIR
Ga0070712_1000288895	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LSKDIKPVATYDGQAARPPGSVAGKARRQRRPTGAPPPLPHPVTITTTAWLVLVAVAIAGAFLASQHTPWLRIDDRASTWVLRLLAG
Ga0070712_1010667202	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LSEHIGRAVAGDGRATLPPGAAVRKARRHRRPTGAPPPLPHPFTVSTAAWLVLGAIVLAGAFLASQHTPWLRLDDRFSTWVL
Ga0066659_107270931	3300006797	Soil	VSDDIRRVIAADGRASLPSGQVPRTTRRQRRPTGAPPPLPHPITITTTAWLILGAVVLAG
Ga0079221_114957222	3300006804	Agricultural Soil	LSEHTGRAAAGSGRSTVPGPAARTGRRQRRPTGAPPPLPHPVTITTTAWLVLVAMGLAGAFLAAQHTPWLRIDDRVSTAVLR
Ga0099794_106636582	3300007265	Vadose Zone Soil	LSDDIGRVIAPDGRASLRPGPAVRNTRRQRRPTGAPPPLPHPITISTTAWLVLGAVVLAGAFLASQHT
Ga0116222_10234094	3300009521	Peatlands Soil	MSEDTGRVAAGDGPAGLPPGPAAGKVHRQRRPSGAPPPLPHPATITTTAWLVLAAVVLAAACVAAQDTPWLRVDDRAGT
Ga0116218_11456901	3300009522	Peatlands Soil	LGDDIGRVAAGNGPASLPPGPAVHKDRRTRRPTGAPPPLPHPITISTTAWLILGAVALAGAFL
Ga0116218_13462991	3300009522	Peatlands Soil	LSEDIEPVATPDGPASLPPGTAVHKTRRQRRPTGAPPPLPHPITISTTAWLILGAVVLTAAFVASQHTPWLRV
Ga0116225_10130851	3300009524	Peatlands Soil	LGDDIGRVAAGNGPASLPPGPAVHKDRRTRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTP
Ga0116225_11056631	3300009524	Peatlands Soil	LGDDIRPVAAGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTP
Ga0116220_101187232	3300009525	Peatlands Soil	LSDDIGRVAAGNGQASSPPGPAVHKERRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVIAGAFLVSQHTPWLRLDDRFSTWVLR*
Ga0116138_11383982	3300009552	Peatland	LGDDIRPVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVLRLLAGI
Ga0126380_102382832	3300010043	Tropical Forest Soil	LSKDIEPLATQDHQAIRPPGPAVHKTRRQRRPTGAPPPLPHPVTITTTAWLILAALVVAGAFAASQHTPWLRIED
Ga0126382_100081721	3300010047	Tropical Forest Soil	LSKDIEPLATQDRQAIRPPGPAVHKTRRQRRPTGAPPPLPHPVTITTTAWLILAALVVAGAFAASQHTP
Ga0126382_111178371	3300010047	Tropical Forest Soil	LASGDGAAGLLGPAVGKGRRQRRPTGAPPPLPHPFTITTTAWLVLAAVVLIAAFVASQHTPWLRVEDRASTSVLRQLAGI
Ga0126382_123867591	3300010047	Tropical Forest Soil	VSKDIEPVATRDHQAIRPPGSAVHKTRRQRRPTGAPPPLPHPVTITTTAWLILAALVVAGAFAASQHTP
Ga0126373_127180101	3300010048	Tropical Forest Soil	LSKDIEPLATQDHQAIRPPGPAVHKTRRQRRPTGAPPPLPHPVTITTTAWLIFAALVVAGAFAASQHTPWLRIEDRASTWVLNQL
Ga0134063_104977071	3300010335	Grasslands Soil	VSDDIGRVIAADGRASSPSGPAVRTTRRQRRPTGAPPPLPHPITITTTAWLVLGAVVLAGAF
Ga0126370_108036392	3300010358	Tropical Forest Soil	VAAGDGRVSSPPGTAAGKGHHQRRPTGAPPPLPHPITITTTAWLVLAALVVAGAFAASQRTPWLRIEDR
Ga0126372_107602051	3300010360	Tropical Forest Soil	VAAGDGRVSLPPGTAVGKGRRQRRPTGAPPPLPHPITITTTAWLVLAALVVAGAFAASQRTPWLRIEDRASTWVLNQLAGI
Ga0126378_104997551	3300010361	Tropical Forest Soil	LAARDSPAGARPGQPIGKGRRRRPTGAPPPLPHPVTITTTAWLVLVALVLAGAFAASQHTPWLRIDDRVSTWVLHQL
Ga0126378_108453052	3300010361	Tropical Forest Soil	LSKDIEPLATQDHQAIRPPGPAVHKTRRQRRPTGAPPPLPHPVTITTTAWLILAALVVAGAFAASQHTPWLRIE
Ga0126377_110404951	3300010362	Tropical Forest Soil	LSEDIEPVATSDGPASRPPGAAVQKTRRQRRPTGAPPPLPHPITISTTAWLILGAVVLAAAFVVSQHTPWLRVDDRVST
Ga0126379_126160301	3300010366	Tropical Forest Soil	LSKDLESVAMRDSQAAWPPASAVSKVRRQRRPTGAPPPLPHPITISTTAWLVLGAVVLAGAFLASQHTPWLRVDD
Ga0126381_1015143792	3300010376	Tropical Forest Soil	LSKDIEPLATQDRQAIRPPGPAVHKTRRQRRPTGAPPPLPHPVTITTTAWLIFAALVVAGAFAASQHTPWLRIEDQASTWVLNQLAG
Ga0136449_1016969961	3300010379	Peatlands Soil	VAAGNGPASLPPGQAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGA
Ga0126383_105969271	3300010398	Tropical Forest Soil	LSKDIEPLATQDRQAIRPPGPAVHKTHRQRRPTGAPPPLPHPVTITTTAWLIFAALVVAGAFAASQHTPWLRIEDQAST
Ga0157344_10109181	3300012476	Arabidopsis Rhizosphere	VSEHIGRAVAGDGRASVPPGPAVRKARRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVIAGAFLAAKHTPWLRVDDRFSTWVLGWL
Ga0137407_103120103	3300012930	Vadose Zone Soil	LSEHIGRAVAGNGQATVPPGPAAHTGRRQRRPTGAPPPLPHPVTITTTAWLVLVAVVLAGAFLAAQHTPWLRIDDQASTWVLRS
Ga0164303_102030341	3300012957	Soil	LSQDIGRVIAGDGPASSPPGPAIRKTRRQRRPTGAPPPLPHPVAITTTVWLVIVAVVLAGAFVASQHTPWLRI
Ga0134087_101580212	3300012977	Grasslands Soil	LSDNVWPVAAGDGRSGLPPGTAHGKGRRQRRPSGAPPPLPHPVSITTTAWLTVAALVVAAAFTASLRTPWLRIDDQ
Ga0181523_104284491	3300014165	Bog	LGDDIRPVAAGNGLASLPPGPAVRKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVL
Ga0181523_106469761	3300014165	Bog	LGDDIRPVGAGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTP
Ga0182014_100054031	3300014491	Bog	LGDDIRPVAAGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVLRLLAGIRT
Ga0182012_109594741	3300014499	Bog	LGDDIRPVAAGNGPASLLPGPAAVHKDRRKRRPSGAPPPLPHPITISTTAWLVLGAVALAGAFLASQHTPWLRIDDRASTWVLRLL
Ga0182024_102336141	3300014501	Permafrost	LSDDIRPVAAGNGPASVPPGAAVHKTRRQRRPTGAPPPLPHPITFSTTAWLVLAAVVLTGAFVVAQ
Ga0132258_124309821	3300015371	Arabidopsis Rhizosphere	LSDDTRRVAGGDGGASPPGAAAGKGRRQRRPTGAPPPLPHPITIGTTAWLVLAAVVLAAAFVASQHG
Ga0132256_1028883861	3300015372	Arabidopsis Rhizosphere	VSEHIGRAVAGDGRASVPPGPAVRKARRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVIAGAFLASQHTPWLRVDDRFSTWVL
Ga0132256_1032055451	3300015372	Arabidopsis Rhizosphere	VSEHTGRTAAGDGRATVPPGPAVRKGRRQRRPTGAPPPLPHPFAVSTAAWLVLGAAVIAGAFLASQHTPWLRLDD
Ga0187807_11312761	3300017926	Freshwater Sediment	LSDDIGRVAAGNGQASSPPGPAVHKERRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVLAGAFLASQHTPWLRL
Ga0187809_104041022	3300017937	Freshwater Sediment	LGDDIGRVAAGNGPASLPPGPAVQKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLWIDDRASTWVLRL
Ga0187817_100793801	3300017955	Freshwater Sediment	LGDDIRPVAAANGPARLPPGPAVRKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTP
Ga0187817_110532071	3300017955	Freshwater Sediment	LGDDIRPVAAGNGLASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTP
Ga0187823_101713542	3300017993	Freshwater Sediment	VSDDIRRVIAADGRASLPSGQVPRTTRRQRRPTGAPPPLPHPITITTTAWLVLGAVVLAGAFLA
Ga0187822_104072091	3300017994	Freshwater Sediment	VSEHIGRMAAGDGRATVPPGPAVRKARRQRRPTGAPPPLPHPFAVSTAAWLVLVAAVIAGAFLASQHTPWL
Ga0187816_101830131	3300017995	Freshwater Sediment	LGDDIRPVAAGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVLRLLA
Ga0187815_102399211	3300018001	Freshwater Sediment	LSDDIGRVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTP
Ga0187815_102503421	3300018001	Freshwater Sediment	LGDDIRPVAVGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTP
Ga0187873_12166282	3300018013	Peatland	LSDDIRPVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPFTISTTAWLVLGAVALAGAFLASQHTPWLRIDDRA
Ga0187867_102728981	3300018033	Peatland	LSDDIRPVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPFTISTTAWLVLGAVALAGAFLASQHTPWLRIDDRASTWVLR
Ga0187855_106153151	3300018038	Peatland	LGDDIRPVAAGNGPASLPPGPAVHKDRRQRRPSGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLR
Ga0066655_103086822	3300018431	Grasslands Soil	LSDNVWPVAAGDGRSGLPPGTAPGKGRRQRRPSGAPPPLPHPVSITTTAWLTVAALVVAAAFTASLRTPWLRMDDQASTWVLNQLAGIR
Ga0066669_102982932	3300018482	Grasslands Soil	VSDDIRRVIAADGRASLPSGQVPRTTRRQRRPTGAPPPLPHPITITTTAWLILGAVVLAGAFLASQHTPWLRIDDQASTWVLRMLA
Ga0210399_101736582	3300020581	Soil	LGDDIRTVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVLRLL
Ga0210395_114458461	3300020582	Soil	VSEHIGRTAAGDGRATVPPGPAVRKARRQRRPTGAPPPLPHPFAVSTAAWLVLGAAVIAGAFLASQHTPWLRSDDRAS
Ga0210401_105516261	3300020583	Soil	LGDDIRTVAAGNGAASLPPGPAVHKDRRQRRPTGAPPPLPRPITISTTAWLILGAVALAGAFLAS
Ga0210408_102213133	3300021178	Soil	VSENTEAVISRDGPDGLPPSSAVHRTRRQRRPTGAPPPLPHPITITTTAWLILGAVVLAGAFLASQHT
Ga0210408_102903952	3300021178	Soil	VSDDIRRVIAADGRASLPSGQVPRTTRRQRRPTGAPPPLPHPITITTTAWLILGAVVLAGAFLASQHT
Ga0210408_105914851	3300021178	Soil	LSEHIGRTAAGDGRATVPPGPAVRKARRQRRPTGAPPPLPHPVNVSTTAWLVLVAVGLAGAFLAAKHTPWL
Ga0210397_114724751	3300021403	Soil	LGDDIGRVAAGNGRASLPPGPAVHKDRRQRRPTGAPPPLPHPITITTTAWLVLVAVVLAGAFLAAQHTPWLRI
Ga0210398_101498412	3300021477	Soil	LGDDIRTVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPW
Ga0210402_103443193	3300021478	Soil	LSEHIGRAVAGNSRATVPGPAAHTGRRHRRPTGAPPPLPHPITITTTAWLLLVAVVLAGAFLAAQHTPWLRIDDRASTW
Ga0207692_101462441	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LSEHIGRAVTGDGRATVPPGPAVRKARRQRRPTGAPPPLPHPVNVSTTAWLVLVAAGLAGAFLAAQHTPWLRVDDR
Ga0207680_107716572	3300025903	Switchgrass Rhizosphere	LSEHIGRAVAGDGRATVPPGPAVRKGRRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVLAGAFLASQHTPWLRVD
Ga0207693_101110701	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LSDDIGRVAAGNGQASSPPGPAVHKERRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVIAGAF
Ga0207693_103700683	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LSKDIKPVATYDGQAARPPGSVAGKARRQRRPTGAPPPLPHPVTITTTAWLVLVAVAIAGAFLASQHTPWLRIDDRASTWVLRLLA
Ga0207665_105920261	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LSKDIKPVATYDGQAARPPGSVAGKARRQRRPTGAPPPLPHPVTITTTAWLVLVAVAIAGAFLASQHTPWLRIDDRASTWVLRL
Ga0207667_100964011	3300025949	Corn Rhizosphere	LSEHIGRAVAGDGRATVPPGPAVRKGRRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVLAGAFLASQHTPWLRVDDRFS
Ga0207677_110966031	3300026023	Miscanthus Rhizosphere	LSQDIGRVIAGDGPASSPPGPAINKTRRQRRPTGAPPPLPHPVAITTTVWLVLVAVVLAGAFVASQHTPWLRIDDRVST
Ga0209267_12500731	3300026331	Soil	VSDDIRRVIAADGRASLPSGQVPRTTRRQRRPTGARPPLPHPITITTTAWLILGAVVLAGAFLASQHTPWLRIDDQAS
Ga0208199_10332021	3300027497	Peatlands Soil	LGDDIGRVAAGNGPASLPPGPAVHKDRRTRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWL
Ga0208199_10733331	3300027497	Peatlands Soil	LGDDIRPVAAGNGSASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWL
Ga0208696_10663071	3300027696	Peatlands Soil	LGDDIRPVAAGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWL
Ga0209415_102050833	3300027905	Peatlands Soil	MSRQTGAVTSPDVAASLSPGPAVLPTARRRRPTGAPPPLPRAFSFSTTAWLILGAVALAGAFLASQHTPWLRID
Ga0209583_100578022	3300027910	Watersheds	LSDDIGRVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQH
Ga0265357_10264572	3300028023	Rhizosphere	VAAGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVLRLLA
Ga0302224_101770152	3300028759	Palsa	LGDDIRPVAAGNGPASLPPGPAVHKDRRQRRPSGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDQA
Ga0307306_101085881	3300028782	Soil	VMVGDGPASLPPGPAVRKTRRQRRPTGAPPPLPHPVSITTTVWLVLVAMVLAGAFVATQHTPWL
Ga0307290_101699932	3300028791	Soil	LSEHIGRAVAGNSRATVPPGPAAHTGRRQRRPTGAPPPLPHPVTITTTAWLVLVAIVLAGAFLAAQHTPWLRIDDRFST
Ga0311368_100596594	3300029882	Palsa	LGDDIRPVAAGNGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVL
Ga0302178_100745091	3300030013	Palsa	LGDDIRPVAAGNGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVLR
Ga0302179_102202931	3300030058	Palsa	LGDDIRPVAAGNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVLRLLAGI
Ga0310037_100286921	3300030494	Peatlands Soil	LSDDIGRVAAGNGQASSPPGPAVHKERRQRRPTGAPPPLPHPFAVSTAAWLVLGAVVIAGAFLVSQHTPWLRLD
Ga0170818_1031907192	3300031474	Forest Soil	LSQDIGRVIAGDGPASSPPGPAIHKTRRQRRPTGAPPPLPHPVAITTTAWLVFTAMILAGAFAAS
Ga0302326_118517392	3300031525	Palsa	LSEDIEPVATRDGPASLPPGTAVHKTRRQRRPTGAPPPLPHPITISMTAWLILGAVVLAAAFVAAQH
Ga0310813_117961501	3300031716	Soil	LSEHIGRAVAGDGRATVPPGPAVRKARRQRRPTGAPPPLPHPFAVSTAAWLVLGAAVIAGAFLASQHTPWL
Ga0307474_101888822	3300031718	Hardwood Forest Soil	LGDDIGRVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITITTTAWLILGAVALAGAFLASQHT
Ga0307475_112637131	3300031754	Hardwood Forest Soil	LRDNIRTVAAGNGPASLPPGPAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPW
Ga0318546_107873662	3300031771	Soil	VLSDNTRRMAAGDAPAGLPPGHAIGKDHRRRRPTGEPPPLPHPVTITTTMWLVLVAMVLAGAFVAAQHTPWLRIDDRVSTGVLRL
Ga0318547_109820131	3300031781	Soil	LSKDIEPVATRDGQAAWPLGSAMGKVRRQRRPTGAPPPLPHPVTISTTAWLVLGAVVLAGAFLASQHTPWLRIDDQAS
Ga0307478_100813912	3300031823	Hardwood Forest Soil	LSDDIGRVATRNGPASLPPGPAVHKDRRKRRPTGAPPPLPHPFTISTAAWLVLGAVALAGAFLASQHTPWLRIDDGASTWVLRLL
Ga0307478_109668791	3300031823	Hardwood Forest Soil	LGDDIRTVAAGNGPASLPPGLAVHKDRRQRRPTGAPPPLPHPITISTTAWLILGAVALAGAFLASQHTPW
Ga0306925_102847741	3300031890	Soil	LSDNIGRGAAGDGPASMPGTAVGKARRQRRPTGEPPPLPHPVTITTTMWLVLVAMVLAGAFVAAQHTPWLRIDDR
Ga0308173_109742512	3300032074	Soil	LSEHIGRAVAGNGRTTVPPGPAVHTGRRQRRPTGAPPPLPHPVTVTTTAWLVLMAMVLAGAFLAAQHTPWLRIDDRASTSVLRFL
Ga0311301_100241341	3300032160	Peatlands Soil	MSRQTGAVTSPDVAASLSPGPAVLPTARRRRPTGAPPPLPRAFSFSTTAWLILGAVALAGAFLASQHTPWLRIDDRASTWVLRLLAGI
Ga0311301_104608131	3300032160	Peatlands Soil	LGDDIRPVAAGNGLASLAPGPAVHKDRRKRRPTGAPPPLPHPITISTTAWLILGAVALA
Ga0335085_123182701	3300032770	Soil	LSDDTRRVAAGDGAASPPGAAAGKGRRQRRPTGAPPPLPHPITIGTTAWLVLAAVVLAAAFVASQHGPWL
Ga0373948_0195073_3_182	3300034817	Rhizosphere Soil	VIVGEGPASLPPGPAVRKTRRQRRPTGVPPPLPHPVSITTTVWLVLVAMVLAGAFVATQH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075198

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences