Metagenome Family F075197

Basic Information
Family ID	F075197
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	46 residues
Representative Sequence	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSILR
Number of Associated Samples	113
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.12 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (53.782 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (25.210 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.059 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.68% β-sheet: 0.00% Coil/Unstructured: 76.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01047	MarR	21.01
PF07690	MFS_1	10.92
PF12802	MarR_2	7.56
PF13463	HTH_27	5.04
PF00378	ECH_1	4.20
PF13417	GST_N_3	2.52
PF02900	LigB	1.68
PF03060	NMO	0.84
PF00043	GST_C	0.84
PF04909	Amidohydro_2	0.84
PF00171	Aldedh	0.84
PF02321	OEP	0.84
PF06230	LpxI_C	0.84
PF02798	GST_N	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.68
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.84
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.84
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.84
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.84
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.84
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.84
COG3494	Uncharacterized conserved protein, DUF1009 family	Function unknown [S]	0.84
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.78 %
Unclassified	root	N/A	46.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.78 %
Unclassified	root	N/A	46.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.78 %
Unclassified	root	N/A	46.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.52 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.22 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.84 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.84 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.22 %
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15	0.84 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.84 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.84 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.22 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.84 %
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15	0.84 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.84 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.22 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.84 %
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15	0.84 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.84 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0299588	Not Available	579	Open in IMG/M
3300000956\|JGI10216J12902_116226972	Not Available	821	Open in IMG/M
3300001471\|JGI12712J15308_10181995	Not Available	549	Open in IMG/M
3300002245\|JGIcombinedJ26739_101290504	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300002245\|JGIcombinedJ26739_101569884	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300002917\|JGI25616J43925_10339859	Not Available	556	Open in IMG/M
3300003319\|soilL2_10045887	All Organisms → cellular organisms → Bacteria → Proteobacteria	1182	Open in IMG/M
3300004082\|Ga0062384_101368891	Not Available	520	Open in IMG/M
3300004091\|Ga0062387_101698743	Not Available	512	Open in IMG/M
3300004114\|Ga0062593_100901329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300005334\|Ga0068869_101396653	Not Available	620	Open in IMG/M
3300005337\|Ga0070682_100604818	Not Available	866	Open in IMG/M
3300005341\|Ga0070691_10316954	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300005466\|Ga0070685_10211049	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300005535\|Ga0070684_101973434	Not Available	551	Open in IMG/M
3300005547\|Ga0070693_101045180	Not Available	620	Open in IMG/M
3300005578\|Ga0068854_101627918	Not Available	589	Open in IMG/M
3300005591\|Ga0070761_10883811	Not Available	564	Open in IMG/M
3300005616\|Ga0068852_102031872	Not Available	597	Open in IMG/M
3300005718\|Ga0068866_10931322	Not Available	613	Open in IMG/M
3300005844\|Ga0068862_102615795	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005994\|Ga0066789_10496297	Not Available	510	Open in IMG/M
3300006174\|Ga0075014_100439638	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300006176\|Ga0070765_102127854	Not Available	524	Open in IMG/M
3300006195\|Ga0075366_10669523	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300006358\|Ga0068871_100886746	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300006638\|Ga0075522_10021252	All Organisms → cellular organisms → Bacteria → Proteobacteria	4082	Open in IMG/M
3300006641\|Ga0075471_10480975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300006804\|Ga0079221_11407258	Not Available	555	Open in IMG/M
3300006853\|Ga0075420_101822877	Not Available	520	Open in IMG/M
3300007004\|Ga0079218_12099692	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300007004\|Ga0079218_13801826	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	513	Open in IMG/M
3300009147\|Ga0114129_12302318	Not Available	647	Open in IMG/M
3300009551\|Ga0105238_12276252	Not Available	577	Open in IMG/M
3300009624\|Ga0116105_1215785	Not Available	535	Open in IMG/M
3300009661\|Ga0105858_1219248	Not Available	567	Open in IMG/M
3300009701\|Ga0116228_10610704	All Organisms → cellular organisms → Bacteria → Proteobacteria	740	Open in IMG/M
3300011269\|Ga0137392_10869694	Not Available	743	Open in IMG/M
3300012357\|Ga0137384_10138708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2035	Open in IMG/M
3300012683\|Ga0137398_10563218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	786	Open in IMG/M
3300012924\|Ga0137413_10704405	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300012929\|Ga0137404_10739128	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300012958\|Ga0164299_11472876	Not Available	530	Open in IMG/M
3300013297\|Ga0157378_12993638	Not Available	524	Open in IMG/M
3300014155\|Ga0181524_10320276	Not Available	699	Open in IMG/M
3300014326\|Ga0157380_10733853	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300014498\|Ga0182019_10978766	Not Available	613	Open in IMG/M
3300015373\|Ga0132257_101033870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1035	Open in IMG/M
3300016387\|Ga0182040_11128468	Not Available	657	Open in IMG/M
3300017972\|Ga0187781_10132356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1744	Open in IMG/M
3300017975\|Ga0187782_11673831	Not Available	503	Open in IMG/M
3300018060\|Ga0187765_11178761	Not Available	536	Open in IMG/M
3300018062\|Ga0187784_11575873	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300018476\|Ga0190274_11379700	Not Available	793	Open in IMG/M
3300019890\|Ga0193728_1157292	Not Available	994	Open in IMG/M
3300020580\|Ga0210403_10982182	Not Available	662	Open in IMG/M
3300020582\|Ga0210395_11448713	Not Available	500	Open in IMG/M
3300021168\|Ga0210406_11375352	Not Available	505	Open in IMG/M
3300021171\|Ga0210405_10579853	Not Available	875	Open in IMG/M
3300021181\|Ga0210388_10179373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1848	Open in IMG/M
3300021402\|Ga0210385_10623549	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300021403\|Ga0210397_10628860	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300021403\|Ga0210397_11609570	Not Available	504	Open in IMG/M
3300021406\|Ga0210386_11122811	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300021420\|Ga0210394_10059347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3330	Open in IMG/M
3300021474\|Ga0210390_10919864	Not Available	718	Open in IMG/M
3300022915\|Ga0247790_10169445	Not Available	569	Open in IMG/M
3300024251\|Ga0247679_1017274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1230	Open in IMG/M
3300025906\|Ga0207699_10256460	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300025926\|Ga0207659_11737246	Not Available	531	Open in IMG/M
3300025931\|Ga0207644_11774983	Not Available	516	Open in IMG/M
3300025934\|Ga0207686_10697773	Not Available	806	Open in IMG/M
3300025940\|Ga0207691_11273762	Not Available	608	Open in IMG/M
3300025942\|Ga0207689_10578081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300025961\|Ga0207712_11384864	Not Available	629	Open in IMG/M
3300026095\|Ga0207676_10201991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1757	Open in IMG/M
3300026095\|Ga0207676_10509630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300026291\|Ga0209890_10079912	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300026320\|Ga0209131_1043904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2553	Open in IMG/M
3300027523\|Ga0208890_1000595	All Organisms → cellular organisms → Bacteria → Proteobacteria	3365	Open in IMG/M
3300027528\|Ga0208985_1085873	Not Available	606	Open in IMG/M
3300027729\|Ga0209248_10016292	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300027867\|Ga0209167_10351792	Not Available	801	Open in IMG/M
3300027867\|Ga0209167_10395748	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300027895\|Ga0209624_10953733	Not Available	558	Open in IMG/M
3300028138\|Ga0247684_1092635	Not Available	505	Open in IMG/M
3300028380\|Ga0268265_12244021	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300028536\|Ga0137415_10215145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1737	Open in IMG/M
3300028773\|Ga0302234_10388653	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300028794\|Ga0307515_10443963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300028808\|Ga0302228_10480356	Not Available	548	Open in IMG/M
3300028906\|Ga0308309_10447676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300029882\|Ga0311368_10388968	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300029951\|Ga0311371_11355323	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300029987\|Ga0311334_10802923	Not Available	774	Open in IMG/M
3300030007\|Ga0311338_11927812	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300030058\|Ga0302179_10031609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2467	Open in IMG/M
3300030490\|Ga0302184_10245495	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300030524\|Ga0311357_10257522	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300030618\|Ga0311354_10189833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2206	Open in IMG/M
3300030618\|Ga0311354_10601329	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300031027\|Ga0302308_10372697	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300031028\|Ga0302180_10370498	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300031128\|Ga0170823_16143942	Not Available	755	Open in IMG/M
3300031231\|Ga0170824_102939935	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300031233\|Ga0302307_10320059	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300031234\|Ga0302325_10233724	All Organisms → cellular organisms → Bacteria → Proteobacteria	3096	Open in IMG/M
3300031547\|Ga0310887_10464645	Not Available	756	Open in IMG/M
3300031708\|Ga0310686_104007512	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031726\|Ga0302321_100511696	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300031820\|Ga0307473_10168836	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300031852\|Ga0307410_10603295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916	Open in IMG/M
3300031995\|Ga0307409_100303098	All Organisms → cellular organisms → Bacteria → Proteobacteria	1487	Open in IMG/M
3300032012\|Ga0310902_11339066	Not Available	508	Open in IMG/M
3300032144\|Ga0315910_10199667	All Organisms → cellular organisms → Bacteria → Proteobacteria	1500	Open in IMG/M
3300032261\|Ga0306920_101235978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15	1077	Open in IMG/M
3300032892\|Ga0335081_12198135	Not Available	581	Open in IMG/M
3300034163\|Ga0370515_0067990	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300034965\|Ga0370497_0182876	Not Available	537	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.31%
Host-Associated	Host-Associated	21.85%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Plants	Host-Associated → Plants	21.85%
Aquatic	Environmental → Aquatic	5.88%
Solid Waste	Engineered → Solid Waste	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.98%
Peat	Environmental → Terrestrial → Peat	13.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.40%
Freshwater	Environmental → Aquatic → Freshwater	4.20%
Roots	Host-Associated → Plants → Roots	2.52%
Marine	Environmental → Aquatic → Marine	0.84%
Sediment	Environmental → Aquatic → Sediment	0.84%
Peat Moss	Host-Associated → Plants → Peat Moss	0.84%
Grass	Engineered → Solid Waste → Grass	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.45%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.52%
Coastal	Environmental → Aquatic → Marine → Coastal	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.84%
Composting	Engineered → Solid Waste → Grass → Composting	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.84%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.84%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.20%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.68%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.68%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.84%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.84%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.84%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_02995882	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MATVESFSTFGLDPRRKLSYWNDRATETFSPLVSDP
JGI10216J12902_1162269722	3300000956	Soil	MASVESFSTFGLDPRRKLTYWNDRATETFSPLVSDPADIRTFNGSIARATIGDLT
JGI12712J15308_101819951	3300001471	Forest Soil	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDIRVF
JGIcombinedJ26739_1012905042	3300002245	Forest Soil	MAPIVSFSTAGLDPRRKLAFWNDQACESFSPLVSDPVDIRTFHGSIARTTI
JGIcombinedJ26739_1015698841	3300002245	Forest Soil	MRTIGGSNMARIVSFSTAGLDARRKLVHWNERASESFSPLVSDPVDIHTFNGSI
JGI25616J43925_103398591	3300002917	Grasslands Soil	MAHIESFSTIGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSIVRGSIGD
soilL2_100458871	3300003319	Sugarcane Root And Bulk Soil	MATVESFSTAGLDPRRKLAYWNERACESFSPLVSDPADIRTFNGSIARA
Ga0062384_1013688912	3300004082	Bog Forest Soil	MAHIESFSTAGLDPRHKLTFWNDRASESFSPLVSEPQDIRAFNGSIARGTLGELS
Ga0062387_1016987431	3300004091	Bog Forest Soil	MMLESFSTVGMDPRRKLTFWNDRASESFSPLVSEPDDIQMFNGSIVRGSI
Ga0062593_1009013291	3300004114	Soil	MASVESFSTIGLDPRRKLTYWNDRATETFSPLVSDPVDIRTFNGSIARASIGDLTLA
Ga0068869_1013966531	3300005334	Miscanthus Rhizosphere	MATIESFSTFGLDPRRKLTYWNERACESFSPLVSDPVDIR
Ga0070682_1006048182	3300005337	Corn Rhizosphere	MATVESFSTTGLDPRRKLTYWNDRACETFSPLVSDPVDIRTFNGSI
Ga0070691_103169542	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MASVESFSTYGLDPRRKLTYWNDRACETFSPLVSDPADIRSFNGSIARAAIGDLTL
Ga0070685_102110492	3300005466	Switchgrass Rhizosphere	MAQIVSFTTAGLDPRRKLAYWNDRACESFSPLVSDPADIRSFNGSIARTA
Ga0070684_1019734342	3300005535	Corn Rhizosphere	MASVESFSTIGLDPRRKLTYWNDRATETFSPLVSDPVDIRTFNGSIARASI
Ga0070693_1010451801	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MATVESFSTNGLDPRRKLNYWNDRASEAFSPLVSDPVDIRTFNGSI
Ga0068854_1016279182	3300005578	Corn Rhizosphere	MASVESFSTIGLDPRRKLTYWNDRATETFSPLVSDPVDIRTFNGSIARASIGDLTL
Ga0070761_108838111	3300005591	Soil	MAAIVSFSTAGLDPRRKLACWNDQASETFSPLVSD
Ga0068852_1020318721	3300005616	Corn Rhizosphere	MATVESFSTTGLDPRRKLTYWNDRACETFSPLVSDPVDIRTFN
Ga0068866_109313222	3300005718	Miscanthus Rhizosphere	MATVESFSTFGLDPRRKLSYWNDRATETFSPLVSD
Ga0068862_1026157951	3300005844	Switchgrass Rhizosphere	MAQIVSFTTAGLDPRRKLAYWNDRACESFSPLVSDP
Ga0066789_104962971	3300005994	Soil	LVPIQSFSTAGMDPRRKLAFWNDRVSESLTPLVSEPVDVRDFNGSISQVSIDDMS
Ga0075014_1004396381	3300006174	Watersheds	MAPIVSFSTAGLDPRRKLAFWNDQACESFSPLVSDPVDIRSFHGSIARTTIGELT
Ga0070765_1021278541	3300006176	Soil	MAHIESFSTIGLDPRRKLAFWNDLASESFSPLVSEPQDIRVFNGSIVRGSIGDMT
Ga0075366_106695231	3300006195	Populus Endosphere	MASVESFSTYGLDPRRKLTYWNDRACETFSPLVSDPADI
Ga0068871_1008867461	3300006358	Miscanthus Rhizosphere	MATVESFSTAGLDPRRKLTYWNERACESFSPLVSDPADIRTFNGSIARASIGDLTLA
Ga0075522_100212526	3300006638	Arctic Peat Soil	MTQIVSFSTAGVDPRRKAAYWNEHACESFSPLVSDPVDIRTFDGSIA
Ga0075471_104809752	3300006641	Aqueous	MAQLQSYSTAGLDPRAKLQFWNDMASDCFSPLVSDP
Ga0079221_114072582	3300006804	Agricultural Soil	MATVESFSTNGLDPRRKLNYWNDRASEAFSPLVSDPVDIR
Ga0075420_1018228772	3300006853	Populus Rhizosphere	MATVESFSTAGLDPRRKLTYWNERACESFSPLVSDPADIRTFNGSIA
Ga0079218_120996922	3300007004	Agricultural Soil	MATVESFSTAGLDPRRKLTYWNERACESFSPLVSDPADIR
Ga0079218_138018261	3300007004	Agricultural Soil	MATVESFSTIGLDPRRKLNYWNERASESFSPLVSDPVDIRT
Ga0114129_123023181	3300009147	Populus Rhizosphere	MAIVESFSTAGLDLRRKLTHWNERVSESAAPLFCDPADRTFNGS
Ga0105238_122762522	3300009551	Corn Rhizosphere	MATVESFSTTGLDPRRKLTYWNDRACETFSPLVSDPVDIRTFNGSIARATIGDLTLA
Ga0116105_12157852	3300009624	Peatland	MAHIESFSTIGLDPRRKLAFWNDRASESFSPLVSEPQ
Ga0105858_12192482	3300009661	Permafrost Soil	MAQIESFSTYGLDPRRKLAFWNDRANETFSPLVSEPEDIRLFNG
Ga0116228_106107042	3300009701	Host-Associated	MAHIESFSTIGLDPRVKLAFWNDKASESFSPLVSQPDDIRFFNG
Ga0137392_108696942	3300011269	Vadose Zone Soil	MAHIESFSTIGLDPRRKLAFWNDRANETFSPLVSEPEDIRVFNGSIV
Ga0137384_101387081	3300012357	Vadose Zone Soil	MAHIESFSTAGLEPRRKLAFWNDRASESFSPMVSEPEDIRVFNGCIV
Ga0137398_105632182	3300012683	Vadose Zone Soil	LAHIESFSTAGLDPRRKLAFWNDRVSESLTPLVSEPVDVRDFNGSISRV
Ga0137413_107044052	3300012924	Vadose Zone Soil	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSE
Ga0137404_107391282	3300012929	Vadose Zone Soil	MAHLESFSTAGLDPRRKLAFWNDCASESFSPLVSE
Ga0164299_114728761	3300012958	Soil	MAQIVSFTTAGLDPRRKLAYGNDRACESFSPLVSDPADIRSFN
Ga0157378_129936381	3300013297	Miscanthus Rhizosphere	MATVESFSTFGLDPRRKLNYWNDRASEAFSPLVSDPVDIRTFNGSIARATIGDLTL
Ga0181524_103202762	3300014155	Bog	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSILR
Ga0157380_107338531	3300014326	Switchgrass Rhizosphere	MASVESFSTIGLDPRRKLTYWNDRATETFSPLVSDPVDIRTFNGSIA
Ga0182019_109787662	3300014498	Fen	MDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSIVRGSIGDMTLSEVYSD
Ga0132257_1010338703	3300015373	Arabidopsis Rhizosphere	MATVESFSTFGLDPRRKLSYWNDRATETFSPLVSDPVDIRTFNGSI
Ga0182040_111284681	3300016387	Soil	MAHLESFSTAGLDPRRKLAFWNDCASESFSPLVSEPEDIRVFNGSIVRGSIGDMSL
Ga0187781_101323563	3300017972	Tropical Peatland	MTQIVSFSTVGLEPHRKLNCWNERASESFSPLVSDPVDLRSFNGSIART
Ga0187782_116738311	3300017975	Tropical Peatland	MAEIESFSTIGLDPRRKLAFWNDWASESFSPLVSEPEDIHIFNG
Ga0187765_111787612	3300018060	Tropical Peatland	MAVIESFSTAGLDPRRKLAYWNDLGSESFSPLVSDPVDIRTFNGSIS
Ga0187784_115758732	3300018062	Tropical Peatland	MAHIESFSTVGLDQRFKLAHWNDYATDSFNPLVSDPADV
Ga0190274_113797001	3300018476	Soil	MATVESFSTIGLDPRRKLTYWNDRATETFSPLVSDPVDIRTFNGSIS
Ga0193728_11572921	3300019890	Soil	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSIVRGSIGDMTLSE
Ga0210403_109821822	3300020580	Soil	MAQIESFSTFGLDPRRKLAFWNDTASESFSPLVSEPE
Ga0210395_114487131	3300020582	Soil	MARIESFSTAGLDPRHKLAFWNDRASESFSPLVSEPEDI
Ga0210406_113753522	3300021168	Soil	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSIVRGTIGDMTL
Ga0210405_105798532	3300021171	Soil	MARIESFSTAGLDPRHKLAFWNDRASESFSPLVSEPEDIRVFNGSIVRGSLGD
Ga0210388_101793734	3300021181	Soil	MAHLESFSTAGLDPRRKLAFWNDCASESFSPLVSEPEDIRAFNGSIV
Ga0210385_106235491	3300021402	Soil	MAPIVSFSTAGLDPRRKLAFWNDQACESFSPLVSDPVDIRT
Ga0210397_106288601	3300021403	Soil	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPD
Ga0210397_116095701	3300021403	Soil	MAHLESFSTAGLDPRRKLAFWNDCASESFSPLVSEPEDIRA
Ga0210386_111228112	3300021406	Soil	MAHIESFSTIGLDPRRKLAFWNDLASESFSPLVSEPQDIRVFNGSIV
Ga0210394_100593475	3300021420	Soil	MAHIESFSTVGLDPRRKLAFWNDRASESFSPLVSEPEDI
Ga0210390_109198641	3300021474	Soil	MARIESFSTAGLDPRHKLAFWNDRASESFSPLVSEP
Ga0247790_101694452	3300022915	Soil	MASVESFSTIGLDPRRKLTYWNDRACETFSPLVSDPVDIRTFNGSIARASIGDLTLA
Ga0247679_10172743	3300024251	Soil	MAHIESFSTIGLDPRRKLAFWNDCASESFSPLVSEPEDIRVFNGAITRGSIGNMT
Ga0207699_102564601	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MATVESFSTTGLDPRRKLTYWNDRACETFSPLVSDPVDIRT
Ga0207659_117372462	3300025926	Miscanthus Rhizosphere	MATVESFSTFGLDPRRKLSYWNDRATETFSPLVSDPVDIR
Ga0207644_117749832	3300025931	Switchgrass Rhizosphere	MASVESFSTYGLDPRRKLTYWNDRACETFSPLVSDPADIRSFNGSIARANIGDLTL
Ga0207686_106977732	3300025934	Miscanthus Rhizosphere	MATVESFSTNGLDPRRKLNYWNDRASEAFSPLVSDPVDIRTFNGSIARATIGD
Ga0207691_112737621	3300025940	Miscanthus Rhizosphere	MASVESFSTIGLDPRRKLTYWNDRATETFSPLVSDPVDIRTFNGSIARA
Ga0207689_105780811	3300025942	Miscanthus Rhizosphere	MATIESFSTFGLDPRRKLTYWNERACESFSPLVSDPVDIRT
Ga0207712_113848642	3300025961	Switchgrass Rhizosphere	MATVESFSTFGLDPRRKLSYWNDRATETFSPLVSDPVDIRTFNGSIARASIGDL
Ga0207676_102019913	3300026095	Switchgrass Rhizosphere	MAQIVSFTTAGLDPRRKLAYWNDRACESFSPLVSD
Ga0207676_105096301	3300026095	Switchgrass Rhizosphere	MASVESFSTIGLDPRRKLTYWNDRATETFSPLVSDPVDIRTFNGSIAR
Ga0209890_100799122	3300026291	Soil	MANIESFSTAGLDPRRKLAFWNERASESFSPLVSEPEDIRVFNGSIVRG
Ga0209131_10439041	3300026320	Grasslands Soil	MAQIESFSTVGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSIVRGSIG
Ga0208890_10005956	3300027523	Soil	MQSFTTTGLDPHRRLAYWNERAGESFSPLVSDPAD
Ga0208985_10858732	3300027528	Forest Soil	MAHLESFSTAGLDPRRKLAFWNDCASESFSPLVSEPEDIRAFNGSIVRGSIGDMS
Ga0209248_100162925	3300027729	Bog Forest Soil	MAHIESFSTAGLDPRHKLTFWNDRASESFSPLVSEPQDIRAFNGSIARGTLGELSV
Ga0209167_103517921	3300027867	Surface Soil	MSHIESFSTAGLDPRHKLTFWNDRASESFSPLVSEPEDIREFNGSIVRGSLGN
Ga0209167_103957483	3300027867	Surface Soil	MAAIVSFSTAGLDLRRKLACWNDQASETFSPLVSDPADLRTFNGSIAR
Ga0209624_109537331	3300027895	Forest Soil	MAHLESFSTAGLDPRRKLAFWNDCASESFSPLVSEPEDIRAFNGSILRGSIGDM
Ga0247684_10926352	3300028138	Soil	MAHIESFSTIGLDPRRKLAFWNDCASESFSPLVSEPEDIRVFNGAITRGSIGNMTLAE
Ga0268265_122440212	3300028380	Switchgrass Rhizosphere	MAQIVSFTTAGLDPRRKLAYWNDRACESFSPLVSDPA
Ga0137415_102151453	3300028536	Vadose Zone Soil	MAHIESFSTIGLDPRRKLAFWNDRANETFSPLVSEPEDIRVFNGSI
Ga0302234_103886532	3300028773	Palsa	MTQIVSFSTAGLDPRRKLACWNEHACESFSPLVSDPADLR
Ga0307515_104439633	3300028794	Ectomycorrhiza	MATVESFSTFGLDPRRKLTYWNERACESFSPLVSDPVDIRTFNGSISRA
Ga0302228_104803561	3300028808	Palsa	MAHLESFSTIGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGS
Ga0308309_104476763	3300028906	Soil	MAHLESFSTAGLDPRRKLAFWNDCASESFSPLVSEPEDIRAFNGSIVRGSIGDMSLAE
Ga0311368_103889682	3300029882	Palsa	MAHIDSFSTFGLDQRRKLAHWNDYATDSFNPLVSDPADVR
Ga0311371_113553231	3300029951	Palsa	MMHIDSFSTIGLDQRRKLDHWNDYATVSFNPLVSD
Ga0311334_108029231	3300029987	Fen	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDIRMF
Ga0311338_119278122	3300030007	Palsa	MAHIDSFSTFGLDQRRKLAHWNDYATDSFNPLVSDPADVRTFNGSISRTTIGDIT
Ga0302179_100316093	3300030058	Palsa	MAAIVSFSTAGLDPRRKLACWNDQASETFSPLVSDPADLRSFNGSIARTTIGDLTLA
Ga0302184_102454951	3300030490	Palsa	MMHIDSFSTIGLDQRRKLDHWNDYATDSFNPLVSDPADVRSFNGSIAR
Ga0311357_102575221	3300030524	Palsa	MAHIDSFSTFGLDQRRKLAHWNDYATDSFNPLVSDPADVRTFNG
Ga0311354_101898333	3300030618	Palsa	MAPIVSFSTAGLDPRRKLAFWNEHACESFSPLVSDPV
Ga0311354_106013292	3300030618	Palsa	MTQIVSFSTAGLDPRRKLACWNEHACESFSPLVSD
Ga0302308_103726971	3300031027	Palsa	MAHIDSFSTFGLDQRRKLAHWNDYATDSFNPLVSDPADVRTFN
Ga0302180_103704982	3300031028	Palsa	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDIREF
Ga0170823_161439422	3300031128	Forest Soil	MAHIESFSTIGLDPRRKLAFWNDCASESFSPLVSEPEDIRVFNGAITRGSIGDMT
Ga0170824_1029399352	3300031231	Forest Soil	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSIVRGTI
Ga0302307_103200592	3300031233	Palsa	MAAIVSFSTAGLDPRRKLACWNDQASETFSPLVSDPADL
Ga0302325_102337244	3300031234	Palsa	MAHIESFSTAGLDPRRKLAFWNDRASESFSPLVSEPEDLRGFNGS
Ga0310887_104646451	3300031547	Soil	MASVESFSTYGLDPRRKLTYWNDRACETFSPLVSDPADIRSF
Ga0310686_1040075121	3300031708	Soil	MMHIDSFSTIGLDQRRKLDHWNDYATDSFNPLVSD
Ga0302321_1005116961	3300031726	Fen	MTQIVSYTTAGLDPRRKLSYWNDRACESFSPLVSDPVD
Ga0307473_101688361	3300031820	Hardwood Forest Soil	MQSFSTAGLDPRRKLAYWNERAGESFSPLVSDPAD
Ga0307410_106032953	3300031852	Rhizosphere	MAAVESFSTNGLDPRRKLTYWNDRACETFSPLVSD
Ga0307409_1003030983	3300031995	Rhizosphere	MAAVESFSTNGLDPRRKLTYWNDRACETFSPLVSDPVDIRTFNGSIAR
Ga0310902_113390661	3300032012	Soil	MATVESFSTNGLDPRRKLTYWNDRACETFSPLVSDPVDIRTFNGSISRA
Ga0315910_101996673	3300032144	Soil	MATVESFSTFGLDPRRKLSYWNDRATETFSPLVSDPADIRTFNGSIAR
Ga0306920_1012359783	3300032261	Soil	MAHLESFSTAGLDPRRKLAFWNDCASESFSPLVSEPED
Ga0335081_121981352	3300032892	Soil	MAHIESFSTAGLDPRRKLEFWNDRASASFSPLVSEPEDIRVFNGSIVR
Ga0370515_0067990_1399_1551	3300034163	Untreated Peat Soil	MAHIESFSTVGLDPRRKLAFWNDRASESFSPLVSEPEDIRVFNGSILRGSI
Ga0370497_0182876_1_126	3300034965	Untreated Peat Soil	MAQLESFSTVGIDPRRKLAFWNDRASESFSPLVSEPEDIRVF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075197

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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