Metagenome Family F075184

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075184
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	60 residues
Representative Sequence	ERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVVP
Number of Associated Samples	91
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.84 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.639 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (49.580 % of family members)
Environment Ontology (ENVO)	Unclassified (45.378 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.49% β-sheet: 38.37% Coil/Unstructured: 58.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13620	CarboxypepD_reg	17.65
PF13520	AA_permease_2	2.52
PF07690	MFS_1	1.68
PF07715	Plug	1.68
PF01590	GAF	1.68
PF12847	Methyltransf_18	0.84
PF03972	MmgE_PrpD	0.84
PF12704	MacB_PCD	0.84
PF07730	HisKA_3	0.84
PF00083	Sugar_tr	0.84
PF02954	HTH_8	0.84
PF13714	PEP_mutase	0.84
PF02518	HATPase_c	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.84
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.84
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.84
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.84
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.64 %
Unclassified	root	N/A	3.36 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.63 %
Unclassified	root	N/A	3.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.56 %
Unclassified	root	N/A	3.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.21 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.56 %
Unclassified	root	N/A	3.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.21 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.88 %
Unclassified	root	N/A	3.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.21 %
Unclassified	root	N/A	3.36 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.68 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.21 %
Unclassified	root	N/A	3.36 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.84 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10035815	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300002245\|JGIcombinedJ26739_101186674	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300005167\|Ga0066672_10622233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300005181\|Ga0066678_10898255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300005184\|Ga0066671_10185191	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300005445\|Ga0070708_100283230	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300005451\|Ga0066681_10880619	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300005507\|Ga0074259_11251872	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300005536\|Ga0070697_100459429	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300005536\|Ga0070697_100817249	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005536\|Ga0070697_101886720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300005561\|Ga0066699_10147262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1603	Open in IMG/M
3300005575\|Ga0066702_10930891	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300005576\|Ga0066708_10000764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9895	Open in IMG/M
3300006032\|Ga0066696_10297008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300006046\|Ga0066652_100178491	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300006175\|Ga0070712_100120284	All Organisms → cellular organisms → Bacteria → Acidobacteria	1975	Open in IMG/M
3300007255\|Ga0099791_10427998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300007258\|Ga0099793_10112111	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300007258\|Ga0099793_10227898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300007265\|Ga0099794_10198912	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300007265\|Ga0099794_10439203	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300007265\|Ga0099794_10806944	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300009088\|Ga0099830_10630945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300009088\|Ga0099830_10668830	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300009088\|Ga0099830_11472725	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009089\|Ga0099828_11344868	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300009143\|Ga0099792_10952367	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300010048\|Ga0126373_11160587	Not Available	838	Open in IMG/M
3300010159\|Ga0099796_10112561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1037	Open in IMG/M
3300010159\|Ga0099796_10512693	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300010303\|Ga0134082_10357483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300010322\|Ga0134084_10226707	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300010362\|Ga0126377_12687571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300010364\|Ga0134066_10264797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300010376\|Ga0126381_102102224	Not Available	813	Open in IMG/M
3300011269\|Ga0137392_11590121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	512	Open in IMG/M
3300011271\|Ga0137393_10638182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300011271\|Ga0137393_11641506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300012189\|Ga0137388_11184443	Not Available	702	Open in IMG/M
3300012198\|Ga0137364_11403070	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300012203\|Ga0137399_10300080	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300012203\|Ga0137399_11068687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300012205\|Ga0137362_10270800	All Organisms → cellular organisms → Bacteria → Acidobacteria	1468	Open in IMG/M
3300012211\|Ga0137377_11122275	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300012285\|Ga0137370_10074051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1874	Open in IMG/M
3300012285\|Ga0137370_10366576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300012351\|Ga0137386_10892739	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300012357\|Ga0137384_11284977	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300012362\|Ga0137361_11502469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300012362\|Ga0137361_11872037	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012917\|Ga0137395_10341865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300012918\|Ga0137396_10990829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300012922\|Ga0137394_11440197	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300012923\|Ga0137359_10653646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300012923\|Ga0137359_11304844	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300012924\|Ga0137413_11577637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	536	Open in IMG/M
3300012925\|Ga0137419_10473082	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300012925\|Ga0137419_10667729	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300012925\|Ga0137419_11717343	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300012929\|Ga0137404_11055384	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300012929\|Ga0137404_11056085	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300012930\|Ga0137407_11038640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300012930\|Ga0137407_11702715	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300012930\|Ga0137407_11769339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300012975\|Ga0134110_10243533	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300012986\|Ga0164304_10411971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300015053\|Ga0137405_1275827	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300015054\|Ga0137420_1138738	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300015054\|Ga0137420_1197433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	540	Open in IMG/M
3300015054\|Ga0137420_1299685	All Organisms → cellular organisms → Bacteria → Acidobacteria	959	Open in IMG/M
3300015241\|Ga0137418_10311559	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300015241\|Ga0137418_10325204	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300015245\|Ga0137409_10057077	All Organisms → cellular organisms → Bacteria	3686	Open in IMG/M
3300018468\|Ga0066662_12251451	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300018482\|Ga0066669_10785492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300019789\|Ga0137408_1339520	All Organisms → cellular organisms → Bacteria → Acidobacteria	1636	Open in IMG/M
3300020001\|Ga0193731_1006318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3022	Open in IMG/M
3300020140\|Ga0179590_1232287	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300020170\|Ga0179594_10169743	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300020199\|Ga0179592_10000511	All Organisms → cellular organisms → Bacteria	15523	Open in IMG/M
3300020199\|Ga0179592_10046887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1962	Open in IMG/M
3300020199\|Ga0179592_10100057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1331	Open in IMG/M
3300021046\|Ga0215015_10561276	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300021088\|Ga0210404_10388991	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300021088\|Ga0210404_10497130	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300021168\|Ga0210406_10891455	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300021344\|Ga0193719_10297335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300021559\|Ga0210409_11145298	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300025898\|Ga0207692_10813591	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300025915\|Ga0207693_10124299	All Organisms → cellular organisms → Bacteria → Acidobacteria	2027	Open in IMG/M
3300025928\|Ga0207700_10042687	All Organisms → cellular organisms → Bacteria → Proteobacteria	3326	Open in IMG/M
3300026307\|Ga0209469_1016632	All Organisms → cellular organisms → Bacteria	2641	Open in IMG/M
3300026322\|Ga0209687_1252707	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300026328\|Ga0209802_1004518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9082	Open in IMG/M
3300026329\|Ga0209375_1001280	All Organisms → cellular organisms → Bacteria	19248	Open in IMG/M
3300026332\|Ga0209803_1326898	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300026356\|Ga0257150_1057550	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300026550\|Ga0209474_10474723	Not Available	634	Open in IMG/M
3300026551\|Ga0209648_10055905	All Organisms → cellular organisms → Bacteria	3362	Open in IMG/M
3300026551\|Ga0209648_10327994	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300026551\|Ga0209648_10493504	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300026551\|Ga0209648_10765716	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300026555\|Ga0179593_1137920	All Organisms → cellular organisms → Bacteria	2947	Open in IMG/M
3300027616\|Ga0209106_1068978	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300027645\|Ga0209117_1152529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300027651\|Ga0209217_1048442	All Organisms → cellular organisms → Bacteria → Acidobacteria	1286	Open in IMG/M
3300027663\|Ga0208990_1003304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5165	Open in IMG/M
3300027681\|Ga0208991_1108107	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300027684\|Ga0209626_1055388	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M
3300027821\|Ga0209811_10168089	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300027846\|Ga0209180_10319396	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300027875\|Ga0209283_10681213	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300028020\|Ga0265351_1024895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300028536\|Ga0137415_11366947	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300031720\|Ga0307469_11901058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300031754\|Ga0307475_11307205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300032180\|Ga0307471_101155250	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300032180\|Ga0307471_101964517	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.16%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.71%
Loam	Environmental → Terrestrial → Soil → Loam	13.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	60.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	49.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100358152	3300001545	Forest Soil	YQSLGNVPTGPIAKTSLLVPEIKRFYSAVPKHVILVPPIPQEKEATVVEAQILVFEVLP*
JGIcombinedJ26739_1011866741	3300002245	Forest Soil	DHYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0066672_106222331	3300005167	Soil	PDHYESLGTVPTGAIAKTSLLVPELKRFYAIVPKHVILTPPIPESKEATIEDAKVLVYEVEP*
Ga0066678_108982551	3300005181	Soil	SLGTVPTGAIAKTSLLVPELKRFYAIAPKHVILTPPIPESKEATIEDAKVLVYEIEP*
Ga0066671_101851913	3300005184	Soil	VFKQADPDHYQLLGKVPTGAIAKTSLLVPELKRFYVGVPKHVILTPPIPQSKEETVEDAKILVFEVTP*
Ga0070708_1002832302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	IDGDHYERLGKVPTGPIAKTSLLVPEMKRFYAAIPRNVILVPPIPQSKEATIVDAQILIYEIVQ*
Ga0066681_108806192	3300005451	Soil	DHYERLGRAATGPIAKTTLLVPELKRFYAAIPRLVILVPPIPQSKEATVEEAKILVYDVVP*
Ga0074259_112518722	3300005507	Arabidopsis Rhizosphere	ATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYEVVP*
Ga0070697_1004594291	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VEVFKQVDADHYERLGRVATGPIAKTTLLVPQLKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVAP*
Ga0070697_1008172491	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AIAKTSLLVPELKRFYAIVPKHVILTPPIPESKEATVEDAKVLVYEVVP*
Ga0070697_1018867202	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PTGAIAKTSLLVPELKRFYAIVPKHVILTPPIPESKEATIEDAKVLVYEVEP*
Ga0066699_101472621	3300005561	Soil	LGRVATGPIAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVIP*
Ga0066702_109308911	3300005575	Soil	AALDTEGGADEIQYDAASQRVYFTGTTGGVDVFKQVDPDHYQRLALIPTSPIAKTSLLVTALKRFYVIVPKHIILTPPIPQDKEATIEDAKVMVFEVLP*
Ga0066708_100007647	3300005576	Soil	ATGPIAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVIP*
Ga0066696_102970082	3300006032	Soil	IAKTSLLVPELKRFYVIVPKHIVITPPVPQDKEATIEEAKVIVFEVLP*
Ga0066652_1001784911	3300006046	Soil	FKQVDPDHYESLGTVPTGAIAKTSVLVPELKRFYAIVPKHIILTPPIPESKEATIEDAKVLVYEIEP*
Ga0070712_1001202841	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AKTSLLVPELGRFYSAVPKHIILTPPVPQAKEAIIEDATVNVYELLP*
Ga0099791_104279981	3300007255	Vadose Zone Soil	NTGFLEMFKQIDGDHYDRLGKVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVAP*
Ga0099793_101121112	3300007258	Vadose Zone Soil	FVEVFKQVDADHYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0099793_102278982	3300007258	Vadose Zone Soil	YERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVIP*
Ga0099794_101989122	3300007265	Vadose Zone Soil	IAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVIP*
Ga0099794_104392032	3300007265	Vadose Zone Soil	ATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVIP*
Ga0099794_108069441	3300007265	Vadose Zone Soil	EVFKQLDADHYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0099830_106309452	3300009088	Vadose Zone Soil	GRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVIP*
Ga0099830_106688301	3300009088	Vadose Zone Soil	GKVATGVLAKTSLLVPELSRFYSAVPKHVILTPPVPQAKEAIIEDAKINVYELLP*
Ga0099830_114727251	3300009088	Vadose Zone Soil	SGAIAKTSLLAPEMQRFFVAVPKHIILTPPIPESKEASIEDAKILVYEVLP*
Ga0099828_113448681	3300009089	Vadose Zone Soil	ERLGKAATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVVP*
Ga0099792_109523671	3300009143	Vadose Zone Soil	IAKTSLLVPEMKRFYAAIPKLVILVPPIPQSKEATIVDAQILVYDVVQ*
Ga0126373_111605871	3300010048	Tropical Forest Soil	TSPIAKTSILVPELNGFYVIVPKHVILTPPVPESTEASIEEAKVLVYEVEK*
Ga0099796_101125611	3300010159	Vadose Zone Soil	ERLGRVPTGPLAKTSLLVPQMKRFYAAITKLVILVPPIPQAKKATIVDAQILVYDVVQ*
Ga0099796_105126932	3300010159	Vadose Zone Soil	EVFKQINADHYERLGRVPSGLIPKTSSLVPETKRFSSAIPKLVILVPPIPQSKEATIVDAQILVYDVVQ*
Ga0134082_103574831	3300010303	Grasslands Soil	TGAIAKTSVLVPELKRFYAIVPKHIILTPPIPESKEATIEDAKVSVYEIEP*
Ga0134084_102267072	3300010322	Grasslands Soil	ATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0126377_126875712	3300010362	Tropical Forest Soil	LGFVPTGALAKTSLLVPELQRFFVAVPKHVILTPPVPESNEATIEDAKILVFQVVP*
Ga0134066_102647972	3300010364	Grasslands Soil	LTGTTGSVEIFKQVDPDHYESLGTVPTGAIAKTSVLVPELKRFYAIVPKHIILTPPIPESKEATIEDAKVLVYEIEP*
Ga0126381_1021022241	3300010376	Tropical Forest Soil	ERLGFVPTSPIAKTSILVPELNGFYVIVPKHVILTPPVPESTEASIEDAKVLVYEVEK*
Ga0137392_115901212	3300011269	Vadose Zone Soil	RVPTGPIAKTSLLVPEMKRFYAAIPKHVILVPPIPQSKEATIVDAQILVYDVVQ*
Ga0137393_106381821	3300011271	Vadose Zone Soil	ERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVVP*
Ga0137393_116415061	3300011271	Vadose Zone Soil	PTGAIAKTSLLVPELKRFYAIVPKHVILTPPIPESKEATIEDAMVLVYEIEP*
Ga0137388_111844431	3300012189	Vadose Zone Soil	VASGPIAKTTPPVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0137364_114030702	3300012198	Vadose Zone Soil	VFDAPSKRIYYTGTTGFEEVIRQIDSDHYDRLGRVATGPIAKTTLLVPELRRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVVP*
Ga0137399_103000801	3300012203	Vadose Zone Soil	DADHYERLGRVATGPIAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVIP*
Ga0137399_110686871	3300012203	Vadose Zone Soil	HYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVAP
Ga0137362_102708002	3300012205	Vadose Zone Soil	GRVPTGPIAKTSLLVPEMKRFYAAIPKLVILVPPIPQSKEATIVDAQILVYDVVQ*
Ga0137377_111222751	3300012211	Vadose Zone Soil	QVDADHYERLGRAATGPIAKTTLLVPELKRFYAAIPRLVILVPPIPQSKEATIEEAKILVYDVVP*
Ga0137370_100740511	3300012285	Vadose Zone Soil	TGAIAKTSLLVSELKRFYAIVPKHIILTPPIPESKEATIEDAKVLVYEIEP*
Ga0137370_103665761	3300012285	Vadose Zone Soil	ERLGRAATGPIAKTTLLVPELKRFYAAIPRLVILVPPIPQSKEATVEEAKILVYDVVP*
Ga0137386_108927391	3300012351	Vadose Zone Soil	YERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0137384_112849771	3300012357	Vadose Zone Soil	QVDADHYERLGKAATGPIAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVVP*
Ga0137361_115024691	3300012362	Vadose Zone Soil	RVGRVATGPIAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVIP*
Ga0137361_118720371	3300012362	Vadose Zone Soil	HYERLGRAATGPIAKTTLLVPELKRFYAAIPRLVILVPPIPQSKEATIEEAKILVYDVVP
Ga0137395_103418651	3300012917	Vadose Zone Soil	VPTSAIAKTSILVPELKRFYAIVPKHVILTPPIPESKEATIEDAMVLVYEIEP*
Ga0137396_109908291	3300012918	Vadose Zone Soil	ADHYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVVP*
Ga0137394_114401971	3300012922	Vadose Zone Soil	KQVDADHYDRLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVVP*
Ga0137359_106536462	3300012923	Vadose Zone Soil	VYFTGTTGGVEVFKQVDPDHYESLGVVPTGAIAKTSLLVPELKRFYAIVPKHVILTPPIPESKEATIEDAKVLVYEVQP*
Ga0137359_113048441	3300012923	Vadose Zone Soil	VEVFKQTDADHYERLGRVPTGPIAKTSLLVPEMKRFYAAIPKLVILVPPIPQSKEATIVDAQILVYDVVQ*
Ga0137413_115776371	3300012924	Vadose Zone Soil	TGPIAKTSLLVPEMKRFYAAIPKLVILVPPIPQSKEATIVDAQILVYDVVQ*
Ga0137419_104730821	3300012925	Vadose Zone Soil	EVFKQVDADHYERLGKVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVAP*
Ga0137419_106677292	3300012925	Vadose Zone Soil	ERLGRVPTGPIAKTSLLVPQMKRFYAAIPKLVILVPPIPQAKEATIVDAQILVYDVVQ*
Ga0137419_117173432	3300012925	Vadose Zone Soil	YFTGTTGGVEVFKQVDPDHYESLGVAPTGAIAKTSILVPDLKRFYAIVPKHIILTPPIPESKEATIEDAKVLVYEVQP*
Ga0137404_110553842	3300012929	Vadose Zone Soil	VEVFRQVDADHYERLGRAATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVIP*
Ga0137404_110560851	3300012929	Vadose Zone Soil	GRVATGPIAKTTLLVPELKRFYAAIPKFVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0137407_110386402	3300012930	Vadose Zone Soil	GTVPTGAIAKTSLLVPELKRFYAIVPKHVILTPPIPESKEATIEDAKVLVYEIEP*
Ga0137407_117027151	3300012930	Vadose Zone Soil	RVATGPIAKTTLLVPELKRFYAAIPKFVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0137407_117693391	3300012930	Vadose Zone Soil	GTVPTGAIAKTSLLVPELKRFYAIVPKHVILTPPIPESKEATIEDAKVLVYEVEP*
Ga0134110_102435331	3300012975	Grasslands Soil	TGFVEVFKQVDADHYERLGRAATGPIAKTTLLVPELKRFYAAIPRLVILVPPIPQSKEATIEEAKILVYDVVP*
Ga0164304_104119712	3300012986	Soil	ATGPIAKTTLLVPQLKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVAP*
Ga0137405_12758272	3300015053	Vadose Zone Soil	EVFKQTDADHYERLGRVPTGPIAKTSLLVPEMKRFYAAIPKLVILVPPIPQSKEATIVDAQILVYDVVQ*
Ga0137420_11387381	3300015054	Vadose Zone Soil	VDADHYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP*
Ga0137420_11974331	3300015054	Vadose Zone Soil	RLGRVPTGPIAKTSLLVPEMKRFYAAIPKLVILVPPIPQSKEATIVDAQILVYDVVQ*
Ga0137420_12996852	3300015054	Vadose Zone Soil	LANVPTGPIAKTSLLVPEMKRFYSAIPKHVILVPPIPQEKEATIVEAKILVFEVLP*
Ga0137418_103115591	3300015241	Vadose Zone Soil	IDADDYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVVP*
Ga0137418_103252041	3300015241	Vadose Zone Soil	ADHYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYEVVP*
Ga0137409_100570771	3300015245	Vadose Zone Soil	IAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVVP*
Ga0066662_122514512	3300018468	Grasslands Soil	PDHYESLGTVPTGAIAKTSLLVPELKRFYAIAPKHVILTPPIPESKEATIEDAKVLVYEIEP
Ga0066669_107854922	3300018482	Grasslands Soil	GRAATGPIAKTTLLVPELKRFYAAIPRLVILVPPIPQSKEATVEEAKILVYDVVP
Ga0137408_13395201	3300019789	Vadose Zone Soil	ATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVVP
Ga0193731_10063181	3300020001	Soil	AKTSLLVPELKRFYSLVPKHIILTPPIPQAKEAAIEDAKIMVYEVLP
Ga0179590_12322871	3300020140	Vadose Zone Soil	TGPIAKTSLLVPEMKRFYSAIPKHVILVPPIPQEKEATIVEAKILVFEVLP
Ga0179594_101697431	3300020170	Vadose Zone Soil	QVDADHYERLGKVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVVP
Ga0179592_1000051110	3300020199	Vadose Zone Soil	ATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVIP
Ga0179592_100468872	3300020199	Vadose Zone Soil	ATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP
Ga0179592_101000572	3300020199	Vadose Zone Soil	QLLANVPTGPIAKTSLLVPEMKRFYSAIPKHVILVPPIPQEKEATIVEAKILVFEVLP
Ga0215015_105612761	3300021046	Soil	PPTGAIAKTSLFVPELKRFYVAVPKHVILTPPIPESKEATIEEAKIMVFEVLP
Ga0210404_103889911	3300021088	Soil	DRLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP
Ga0210404_104971301	3300021088	Soil	DADHYERLGRVATGPIAKTSLLVPDMKRFYAAIPKHVILVPPIPQSKEATIEDATIKVYEVMP
Ga0210406_108914551	3300021168	Soil	VYLTGTTGAVDVFRQIDPDHYERLGLVASGAIAKTSLLVRETQRFYVAVPKHVILTPPLPESKEATVEDAKILEYEVMP
Ga0193719_102973351	3300021344	Soil	EVFKQVDPDHYESLGTVPTGAIAKTSLLVPELKRFYAIVPKHVILTPPIPESKEATIEDAKVLVYEIEP
Ga0210409_111452981	3300021559	Soil	KQVDPDHYQLLGKVPTGALAKTALLVPELKRFYVAVPKHIILTPPIPQSQEATIEEAKLLVFDVVP
Ga0207692_108135911	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	PIAKTSLLVPELKRFYVIVPKHIVLTPPVPQTQEASIEDANVMVFDVLP
Ga0207693_101242993	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GVLAKTSLLVPELGRFYSAVPKHIILTPPVPQAKEAIIEDATVNVYELLP
Ga0207700_100426875	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	FIEVFKQLDANHYQSLGKVPTGVIAKTSLLVPELSRFYSAVPKHVILTPPIPQAKEAIIEDAKINVYELLP
Ga0209469_10166321	3300026307	Soil	RVATGPIAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVIP
Ga0209687_12527071	3300026322	Soil	DHYERLGRVATGPIAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVI
Ga0209802_10045188	3300026328	Soil	VPTGAIAKTSLLVPELKRFYAIVPKHVILTPPVPESKEATIEDAKVLVYEVEP
Ga0209375_100128013	3300026329	Soil	DRLGRVATGPIAKTTLLVPELKRFYAAVPKLVILVPPIPQSKEATIEEAKILVYDVIP
Ga0209803_13268982	3300026332	Soil	VEVFKQVDADHYERLGRAATGPIAKTTLLVPELKRFYAAIPRLVILVPPIPQSKEATIEEAKILVYDVVP
Ga0257150_10575502	3300026356	Soil	QSLGKVATGVLAKTSLLVPELSRFYSAVPKHVILTPPIPQAKEAIIEDAKINVYELLP
Ga0209474_104747231	3300026550	Soil	TGPIAKTTLLVPELKRFYAAIPRLVILVPPIPQSKEATVEEAKILVYDVVP
Ga0209648_100559051	3300026551	Grasslands Soil	GPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVIP
Ga0209648_103279941	3300026551	Grasslands Soil	GTTGGVDVFKQVDPDHYERLGVVPTGAIAKTSILVPELKRFYAIVPKHVILTPPIPESTEAAIEDAKILVYEVEP
Ga0209648_104935042	3300026551	Grasslands Soil	EVFKQVDADHYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVVP
Ga0209648_107657162	3300026551	Grasslands Soil	YERLGKVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEDAKILVYDVVP
Ga0179593_11379201	3300026555	Vadose Zone Soil	RLGRAATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVIP
Ga0209106_10689782	3300027616	Forest Soil	TGAIAKTSLLVPELNRFYSAVPKHIILTPPVPQAKEATVEDAQVMVYEVLR
Ga0209117_11525292	3300027645	Forest Soil	GRAATGAIAKTALLVPELHRFYAAVPKHLIITPPVPQAKEVSVEDAKIMVYEVMR
Ga0209217_10484421	3300027651	Forest Soil	ERLGVVPTGAIAKTSILVPELKRFYAIVPKHVILTPPIPESTEASIEDAKILVYEVEP
Ga0208990_10033047	3300027663	Forest Soil	KRVYYTGTTGSVAVFKQIDGDHYQLLANVPTGPIAKTSLLVPEMKRFYSAIPKHVILVPPIPQEKEATIVEAKILVFEVLP
Ga0208991_11081072	3300027681	Forest Soil	VDPDHYERLGVVPSGAIAKTSILVPELKRFYVIVPKHVILTPPIPESTEATIEDAKIMVYEVEP
Ga0209626_10553882	3300027684	Forest Soil	SGALAKTSILVPELKRFYVEVPKHIILTPPIPQSKEAAIEDAKVMVYEVMP
Ga0209811_101680891	3300027821	Surface Soil	DADHYERLGRVPTGPIAKTSLLVPEMKRFYAAIPKLVILVPPIPQSKEATIVDAQILVYDVVQ
Ga0209180_103193961	3300027846	Vadose Zone Soil	HYQSLGKVATGVLAKTSLLVPELSRFYSAVPKHVILTPPIPQAKEAIIEDAKINVYELLP
Ga0209283_106812131	3300027875	Vadose Zone Soil	YERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVVP
Ga0265351_10248952	3300028020	Soil	PSKRVYFTGTTGGVDVFKQVDPDRYERLGLVPSGALAKTSLLVRELNRFYVVVPKHIILTPPIPQSKEAAIEDAKVLVYEVMP
Ga0137415_113669471	3300028536	Vadose Zone Soil	ADHYERLGRVATGPIAKTTLLVPELKRFYAAIPKLVILVPPIPQSKEATIEEAKILVYDVMP
Ga0307469_119010581	3300031720	Hardwood Forest Soil	KQVDPDHYESLGVVPTGAIAKTSLLVPELKRFYAIVPKHIILTPPIPESKEATIEDAKVLVYEVQP
Ga0307475_113072052	3300031754	Hardwood Forest Soil	IAKTSLFCPELNRFYSAVPKHVILTPPVPESKEATIEDAKVMVYEVLP
Ga0307471_1011552502	3300032180	Hardwood Forest Soil	PDHYQLLGKVPTGALAKTALLVPELKRFYVAVPKHIILTPPIPQSQEATIEEAKLLVFDVVP
Ga0307471_1019645172	3300032180	Hardwood Forest Soil	GKAPTGVLAKTSLLVPELGRFYSAIPKHVILTPPVPQAKEASIEDAQINVYELAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075184

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences