Metagenome / Metatranscriptome Family F075173

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075173
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	64 residues
Representative Sequence	PLVVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL
Number of Associated Samples	102
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.85 %
% of genes near scaffold ends (potentially truncated)	94.96 %
% of genes from short scaffolds (< 2000 bps)	91.60 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (31.092 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.983 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 16.67% Coil/Unstructured: 83.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13387	DUF4105	15.13
PF12697	Abhydrolase_6	3.36
PF12706	Lactamase_B_2	3.36
PF01699	Na_Ca_ex	2.52
PF00582	Usp	2.52
PF00753	Lactamase_B	2.52
PF03358	FMN_red	1.68
PF12695	Abhydrolase_5	1.68
PF00343	Phosphorylase	1.68
PF07690	MFS_1	0.84
PF04226	Transgly_assoc	0.84
PF11737	DUF3300	0.84
PF00230	MIP	0.84
PF01734	Patatin	0.84
PF13792	Obsolete Pfam Family	0.84
PF03952	Enolase_N	0.84
PF13533	Biotin_lipoyl_2	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	2.52
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	2.52
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	1.68
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.84
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.84
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.84
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.84
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.84
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	60.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.52 %
Unclassified	root	N/A	2.52 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	60.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.52 %
Unclassified	root	N/A	2.52 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	41.18 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.52 %
Unclassified	root	N/A	2.52 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.18 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.52 %
Unclassified	root	N/A	2.52 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.52 %
Unclassified	root	N/A	2.52 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.68 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.52 %
Unclassified	root	N/A	2.52 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.68 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.52 %
Unclassified	root	N/A	2.52 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.68 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.84 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	41.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.52 %
Unclassified	root	N/A	2.52 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.68 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.84 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459011\|GKWS7RC01EMNTM	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
2228664022\|INPgaii200_c0993129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300000890\|JGI11643J12802_12227213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300000891\|JGI10214J12806_12520748	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300000955\|JGI1027J12803_108809216	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300000956\|JGI10216J12902_117113894	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300004114\|Ga0062593_102217729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300004156\|Ga0062589_102653371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	521	Open in IMG/M
3300004463\|Ga0063356_103428676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300004479\|Ga0062595_102117300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	548	Open in IMG/M
3300005093\|Ga0062594_100404986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1104	Open in IMG/M
3300005166\|Ga0066674_10123609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1211	Open in IMG/M
3300005167\|Ga0066672_10472025	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005167\|Ga0066672_10911330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005171\|Ga0066677_10732521	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005175\|Ga0066673_10875709	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005177\|Ga0066690_10213541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1287	Open in IMG/M
3300005186\|Ga0066676_10437917	Not Available	884	Open in IMG/M
3300005186\|Ga0066676_10744846	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005337\|Ga0070682_100031799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3194	Open in IMG/M
3300005355\|Ga0070671_100791016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	826	Open in IMG/M
3300005365\|Ga0070688_100341371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	1094	Open in IMG/M
3300005436\|Ga0070713_101951512	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300005445\|Ga0070708_101632390	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005450\|Ga0066682_10252988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1134	Open in IMG/M
3300005450\|Ga0066682_10907879	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005457\|Ga0070662_101412546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300005467\|Ga0070706_102154179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300005529\|Ga0070741_10051277	All Organisms → cellular organisms → Bacteria	5001	Open in IMG/M
3300005536\|Ga0070697_100903589	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300005544\|Ga0070686_101236482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	622	Open in IMG/M
3300005553\|Ga0066695_10309441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	995	Open in IMG/M
3300005554\|Ga0066661_10839877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005558\|Ga0066698_10827191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300005569\|Ga0066705_10066798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2063	Open in IMG/M
3300005574\|Ga0066694_10179657	Not Available	1004	Open in IMG/M
3300005574\|Ga0066694_10273670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300005587\|Ga0066654_10007546	All Organisms → cellular organisms → Bacteria	3915	Open in IMG/M
3300005614\|Ga0068856_102279137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	550	Open in IMG/M
3300006175\|Ga0070712_100556990	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300006791\|Ga0066653_10675127	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006796\|Ga0066665_10013187	All Organisms → cellular organisms → Bacteria	4895	Open in IMG/M
3300006797\|Ga0066659_10193428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1483	Open in IMG/M
3300006800\|Ga0066660_10127409	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300006881\|Ga0068865_100260919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1372	Open in IMG/M
3300006904\|Ga0075424_102163644	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300007788\|Ga0099795_10216136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300009012\|Ga0066710_103854151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300009101\|Ga0105247_10898215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300009147\|Ga0114129_13308628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300010042\|Ga0126314_10170465	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300010046\|Ga0126384_10128882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1917	Open in IMG/M
3300010046\|Ga0126384_10225919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1498	Open in IMG/M
3300010322\|Ga0134084_10398773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300010326\|Ga0134065_10451510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300010333\|Ga0134080_10257953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300010336\|Ga0134071_10034743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2222	Open in IMG/M
3300010358\|Ga0126370_12602083	All Organisms → cellular organisms → Bacteria → Nitrospirae	506	Open in IMG/M
3300010361\|Ga0126378_11415915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300010361\|Ga0126378_12919471	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300010364\|Ga0134066_10070312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	951	Open in IMG/M
3300010373\|Ga0134128_10417872	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300010373\|Ga0134128_11998962	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300010376\|Ga0126381_102200127	All Organisms → cellular organisms → Bacteria → Nitrospirae	793	Open in IMG/M
3300010398\|Ga0126383_10352031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1493	Open in IMG/M
3300010398\|Ga0126383_10392844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1421	Open in IMG/M
3300010399\|Ga0134127_13487625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300012022\|Ga0120191_10095457	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012285\|Ga0137370_10008350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4843	Open in IMG/M
3300012285\|Ga0137370_10675383	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012361\|Ga0137360_10754020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	837	Open in IMG/M
3300012685\|Ga0137397_10250169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1321	Open in IMG/M
3300012892\|Ga0157294_10145506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300012929\|Ga0137404_11862702	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012929\|Ga0137404_12121636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300012951\|Ga0164300_11141131	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012955\|Ga0164298_10842814	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012987\|Ga0164307_10111246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1736	Open in IMG/M
3300012989\|Ga0164305_10237873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1307	Open in IMG/M
3300013296\|Ga0157374_12481330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	546	Open in IMG/M
3300013306\|Ga0163162_11849757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300014150\|Ga0134081_10121386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300014150\|Ga0134081_10160474	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300014150\|Ga0134081_10277034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	595	Open in IMG/M
3300015051\|Ga0137414_1162478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1446	Open in IMG/M
3300015264\|Ga0137403_11356680	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300015359\|Ga0134085_10362920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300015359\|Ga0134085_10370387	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300015371\|Ga0132258_11822928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1533	Open in IMG/M
3300015372\|Ga0132256_100075749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3202	Open in IMG/M
3300015372\|Ga0132256_102661938	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300015373\|Ga0132257_102258338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300015374\|Ga0132255_100769564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1434	Open in IMG/M
3300016404\|Ga0182037_11614028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300017654\|Ga0134069_1180936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300019998\|Ga0193710_1012892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	853	Open in IMG/M
3300020062\|Ga0193724_1084027	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300020170\|Ga0179594_10415175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300025290\|Ga0207673_1061942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	533	Open in IMG/M
3300025315\|Ga0207697_10182539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	920	Open in IMG/M
3300025315\|Ga0207697_10446276	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300025930\|Ga0207701_10178399	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300025930\|Ga0207701_10289845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1423	Open in IMG/M
3300025930\|Ga0207701_10908238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300025931\|Ga0207644_10338934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1219	Open in IMG/M
3300025944\|Ga0207661_11244230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300026305\|Ga0209688_1036215	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300026523\|Ga0209808_1202419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300026536\|Ga0209058_1109245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1383	Open in IMG/M
3300026550\|Ga0209474_10174759	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300027665\|Ga0209983_1003846	All Organisms → cellular organisms → Bacteria	3181	Open in IMG/M
3300027682\|Ga0209971_1029303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1318	Open in IMG/M
3300027873\|Ga0209814_10504284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300030844\|Ga0075377_11714265	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300031446\|Ga0170820_14121787	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300031474\|Ga0170818_106504356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300032001\|Ga0306922_10623516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1141	Open in IMG/M
3300033412\|Ga0310810_10957004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.51%
Host-Associated	Host-Associated	18.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.51%
Plants	Host-Associated → Plants	18.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.40%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.27%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.52%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.52%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.84%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300019998	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F64_05056230	2170459011	Grass Soil	LIDLNGRRIPVKTNSIQPAGPPQTARQAQYGHTAGTTVVNPRTTLQFQLAAALNL
INPgaii200_09931292	2228664022	Soil	SSRRNPRKSQPLSVELASVDVNGRRIAVKTNSVEPHGPPQTARQAHYGHTAGTTVVNPQTRLQFQLLRPFTL
JGI11643J12802_122272132	3300000890	Soil	GPLTVELASIDLNGRRIPVKTSSVQPAGPPQTARQAHYGHTAGTTVVNPKTTLQFQLLQAVTF*
JGI10214J12806_125207481	3300000891	Soil	LTVALDSIDLNGRRIPVKTNSIQPGGPPQTARQAQYGHTAGTTVINPKTTLQFQLAAPLNL*
JGI1027J12803_1088092163	3300000955	Soil	VHSSRRNPRKSEALSVELTSVEMNGRRVAVKTSPIEPHGPPQTARQAQYGHTAGTTVVNPKTSLQFQLLQPVAL*
JGI10216J12902_1171138942	3300000956	Soil	LNGRRVPVKTNDIQPGGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPVTF*
Ga0062593_1022177292	3300004114	Soil	GPLAVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLQFQLLQPVTL*
Ga0062589_1026533711	3300004156	Soil	ASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0063356_1034286762	3300004463	Arabidopsis Thaliana Rhizosphere	GKVTASRANPRKSGPLTVELDTIDLNGRRIPVKTSGVQPAGPPQTARQAHYGHTAGTTVVNPKTTLQFQLLQPVTF*
Ga0062595_1021173002	3300004479	Soil	SGPLAVELASIDLNGRRTTVKTNDVQPAGPPQTGRQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0062594_1004049861	3300005093	Soil	GPLAVELASIDLNGRRTTVKTNDVQPAGPPQTGRQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0066674_101236091	3300005166	Soil	LASVSVNGRNVAVKTTSVEPHGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPVNL*
Ga0066672_104720251	3300005167	Soil	VTSSRANPRKSGPLTVELASIDVNGRRIPVKTSSVQPASPAQTARQAHYGHTAGTTVVNPQTRLQFQLLQAVTF*
Ga0066672_109113302	3300005167	Soil	TSSRANPRKSGPLTVELSSIEVTGRRIPVKTSSVQPAGPPQTARQAHYGHTAGTTVVNPGTKLQFQLLQAVTP*
Ga0066677_107325211	3300005171	Soil	EPLAVELTSVSMNGRKVALKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVSL*
Ga0066673_108757091	3300005175	Soil	ANPRKSGPLTVELDSIDLNGRRIQVKTNSVQPAGPPQTARQAQYGHTAGTTVVNPQTTLQFQLAAALNL*
Ga0066690_102135411	3300005177	Soil	EVNGRRVPVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPKTLLQFQLRQPVAL*
Ga0066676_104379171	3300005186	Soil	RKSGPLTVELASIDVNGRRIPVKTSSVQPAGPPQTARQAQYGHTAGTTVVNPGTKMQFQLVQAVTL*
Ga0066676_107448461	3300005186	Soil	RKSGPLTVELASIDVNGRRIPVKTSSVQPAGPPQTARQAHYGHTAGTTVVNPQTRLQFQLLQAVTF*
Ga0070682_1000317994	3300005337	Corn Rhizosphere	AVELMSVSVNGRKVAVKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL
Ga0070671_1007910161	3300005355	Switchgrass Rhizosphere	LNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0070688_1003413712	3300005365	Switchgrass Rhizosphere	SRKSGPLAVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLQFQLLQPVTL*
Ga0070713_1019515122	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VELASIDLNGRRTTVKTNDVQPAGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVSL*
Ga0070708_1016323901	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TASRANPRKSGPLTVELDSIDLNGRRIPVKTSSVQPGGPPQTARQAQYGHTAGTTVVNPKTTLQFQLAAPLNL*
Ga0066682_102529882	3300005450	Soil	SEALSVELASVSVNGRNVAVKTTSVEPHGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPLNL*
Ga0066682_109078791	3300005450	Soil	SEALSVELASVSVNGRNVAVKTTSVEPHGPPQTARQARYGHTAGTTAVNPGTRMQFQLLQPVTL*
Ga0070662_1014125461	3300005457	Corn Rhizosphere	ASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLHFQLLQPVTL*
Ga0070706_1021541791	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KAFGKVTSSRANPRKSGPLTVELASIDVNGRRIPVKTSGVQPAGPPQTARQAHYGHTAGTTVVNPQTRLQFQLVQAVTM*
Ga0070741_100512771	3300005529	Surface Soil	EMNGRKVPIKTNDIHPAAGPQTARQARYGHTAGTTVVNPGTRLQFELLQPLTL*
Ga0070697_1009035892	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VELASIEANGRRIPVKTNSMEPHGPPQTARQAHYGHTAGTTVVNPGTRLQFQLLQPVTL*
Ga0070686_1012364821	3300005544	Switchgrass Rhizosphere	RANSRKSGPLAVELASIDLNGRRTTVKTNDVQPAGPPQTGRQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0066695_103094411	3300005553	Soil	GRNIAVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPGTRLQFQLLQSVTL*
Ga0066661_108398772	3300005554	Soil	SSRANPRKSGPLSVELASIDVNGRRISVKTNSVEPHGPPQTARQAHYGHTAGTTVVNPGTKIQFQLVQAANL*
Ga0066698_108271911	3300005558	Soil	RNPRKSEALSVELTLVEVNGRRVPVKTNTVEPHGPPQTGRQAQYGHTAGTTVVNPKTLLQFQLRQPVTL*
Ga0066705_100667981	3300005569	Soil	GTKAFGKIHSSRRNPRKSEALSVELTLVEVNGRRVPVKTNTVEPHGPPQTGRQAQYGHTAGTTVVNPKTLLQFQLRQPVAL*
Ga0066694_101796573	3300005574	Soil	KITSSRANPRKSGPLTVELASIDVNGRRIPVKTSSVQPAGPPQTARQAQYGHTAGTTVVNPGTKMQFQLVQAVTL*
Ga0066694_102736702	3300005574	Soil	RVPVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPKTLLQFQLRQPVAL*
Ga0066654_100075466	3300005587	Soil	LSVELTFVEVNGRRVPVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPKTLLQFQLRQPVAL*
Ga0068856_1022791372	3300005614	Corn Rhizosphere	VELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLQFQLLQPVTL*
Ga0070712_1005569901	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LDSIDLNGRRIPVKTNSVQPAGPPQTARQAQYGHTAGTTVVNPKTTLQFQLTAPLNL*
Ga0066653_106751271	3300006791	Soil	ELESVSVNGRNVAVKTTSVEPHGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPVTL*
Ga0066665_100131878	3300006796	Soil	TASRANPRKSGPLTVELNLIDLNGRRIPVKTNSIQPTGPPQTARQAHYGHTAGTTVVNPQTTLQFQLAAPLNL*
Ga0066659_101934281	3300006797	Soil	VPVKTNTVEPHGPPQTGRQAQYGHTAGTTVVNPKTLLQFQLRQPVAL*
Ga0066660_101274092	3300006800	Soil	SEPLSVELASVSVNGRNVAVKTSSVEPHGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPVTL*
Ga0068865_1002609191	3300006881	Miscanthus Rhizosphere	SRKSGPLAVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0075424_1021636441	3300006904	Populus Rhizosphere	KVSSSRRNPRKSEPLSVELTSVEMNGRRIPVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPKTTLQFQLLQPVTL*
Ga0099795_102161361	3300007788	Vadose Zone Soil	LTLVEVNGRRVPVKTNTVEPHGPPQTGRQAQYGHTAGTTVVNPKTLLQFQLRQPVAL*
Ga0066710_1038541511	3300009012	Grasslands Soil	RNVAVKTTSVEPHGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPVNL
Ga0105247_108982152	3300009101	Switchgrass Rhizosphere	LAVELMSVSVNGRKVAVKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0114129_133086281	3300009147	Populus Rhizosphere	LAVELFSIEMNGRRIPVKTGSIEPHGPPETARQAHYGHTAGTTVVNPKTMLQFQLLQAVTF*
Ga0126314_101704651	3300010042	Serpentine Soil	ILTNGRTIPVKTNSVQPHGPPQTGRQAQYGHTAGTTVVNPGTTIQFQLSETVMF*
Ga0126384_101288822	3300010046	Tropical Forest Soil	VPIRANQGPLGVELSSIEVNGRRIPVKTNDIQPAGPPQTARQAHYGHTAGTTVVNPGTTLQFELLQPVTI*
Ga0126384_102259192	3300010046	Tropical Forest Soil	SSRRNPRKSEPLSVELTSVSVNGRNVALKTNSMEPHGPPQTARQARYGHTAGTTVVNPKTLLHFQLLKPVTL*
Ga0134084_103987732	3300010322	Grasslands Soil	LSVELTLVEVNGRRVPVKTNTVEPHGPPQTGRQAQYGHTAGTTVVNPKTLLQFQLRQPVAL*
Ga0134065_104515102	3300010326	Grasslands Soil	HSSRRNPRKSEALSVELTFVEVNGRRVPVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPKTLLRFQLRQPVAL*
Ga0134080_102579533	3300010333	Grasslands Soil	PRKSGPLTVELASIDVNGRRIPVKTSSVQPAGPPQTARQAQYGHTAGTTVVNPGTKMQFQLVQAVTL*
Ga0134071_100347431	3300010336	Grasslands Soil	NVAVKTTSVEPHGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPVNL*
Ga0126370_126020832	3300010358	Tropical Forest Soil	NGRNVPVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPGTRMQFQLLQPVTL*
Ga0126378_114159152	3300010361	Tropical Forest Soil	ANPRKSEPLSVELASIDVNGRRIGVKTNSVEPHGPPQTARQARYGHTAGTTVVNPKTLLRFQLLQPVTL*
Ga0126378_129194712	3300010361	Tropical Forest Soil	PVKTSSVELHGPPQTARQAHYGHTAGTTVVNPKTLLHFQLLQPVTL*
Ga0134066_100703122	3300010364	Grasslands Soil	SGPLTVELASVSVNGRNVAVKTNSVQPGGPPQTARQAQYGHTAGTTVVNPGSKMQFQLLQAATL*
Ga0134128_104178721	3300010373	Terrestrial Soil	PRRSEPLAVELTSVSVNGRKVAVKTSPTAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0134128_119989621	3300010373	Terrestrial Soil	RSEPLAVELTSVSVNGRKVAVKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0126381_1022001271	3300010376	Tropical Forest Soil	NGRRIGVKTNSVEPHSPPQTARQAQYGHTAGTTVVNPGTRMQFQLLQAVTL*
Ga0126383_103520311	3300010398	Tropical Forest Soil	KVFGKIASSRANPRKSGPLSLELSLIEVNGRRIPVSTNRMEPHGPPQTARQAHYGHTAGTTVVNPGTRLQFQLLQPVTL*
Ga0126383_103928443	3300010398	Tropical Forest Soil	SVDLNGRRIGVKTNSVEPHSPPQTARQAQYGHTAGTTVVNPGTRMQFQLLQPVTL*
Ga0134127_134876252	3300010399	Terrestrial Soil	SSRANSRKSGPLAVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0120191_100954571	3300012022	Terrestrial	IELNGRKIPIKTDDVQPGGPPQTARQARYGHTAGTTVVNPGKRLQFQLLQPVTL*
Ga0137370_100083502	3300012285	Vadose Zone Soil	VALASIDLNGRRIPVKTNSVQPEGPPQTARQAHYGHTAGTTVVNPKTTLQFQLAAPLNL*
Ga0137370_106753832	3300012285	Vadose Zone Soil	IDLNGRRIPVKTNSIQPAGPPQTARQAHYGHTAGTTVVNPKTTLQFQMAAPLNL*
Ga0137360_107540201	3300012361	Vadose Zone Soil	KSGPLSVELASIDVNGRRISVKTNSVEPHGPPQTARQAHYGHTAGTTVVNPGTKIQFQLVQAANL*
Ga0137397_102501691	3300012685	Vadose Zone Soil	LASIDLNGRRTTVKTNDVQPAGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0157294_101455062	3300012892	Soil	RNPRKSEPLAVELMSVSVNGRKVAVKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0137404_118627021	3300012929	Vadose Zone Soil	KIRSSRANPRKAEPLTVELTSVSVSGRNVGVKTNSVQPGGPPQTARQAQYGHTAGTTVVNPGSKMQFQLVQAATL*
Ga0137404_121216361	3300012929	Vadose Zone Soil	PRKSEPLSVELASVSVNGRNVAVKTNSVEPHGPPQTARQAHYGHTAGTTVVNPKTLLQFQLLQPVTL*
Ga0164300_111411311	3300012951	Soil	PLVVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0164298_108428141	3300012955	Soil	IAVKTNSVEPHGPPQTARQARYGHTAGTTVVNPQTRLQFQLLRVFTL*
Ga0164307_101112462	3300012987	Soil	SVNGRKVAVKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0164305_102378731	3300012989	Soil	ELASIDLNGRRTTVKTNDVQPAGPPQTGRQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0157374_124813302	3300013296	Miscanthus Rhizosphere	NPRKSEPLAVELMSVSVNGRKVAVKTSSVAPHGPPQTGRQAQYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0163162_118497571	3300013306	Switchgrass Rhizosphere	KVTSSRANSRKSGPLAVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVSL*
Ga0134081_101213862	3300014150	Grasslands Soil	VELTFVEVNGRRVPVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPKTLLQFQLRQPVAL*
Ga0134081_101604743	3300014150	Grasslands Soil	LTVELASIDVNGRRIPVKTSSVQPAGPPQTARQAQYGHTAGTTVVNPGTKMQFQLVQAVTL*
Ga0134081_102770342	3300014150	Grasslands Soil	SEPLAVELTSVSMNGRKVALKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVSL*
Ga0137414_11624784	3300015051	Vadose Zone Soil	VELTFVEVNGRRVAVKTNSVEPHGPPQTGRQAQYGHTAGTTVVNPKTLLQFQLLQPVAL*
Ga0137403_113566802	3300015264	Vadose Zone Soil	AFGKVSSSRRNPRKSEPLSVELASVSVNGRNVAVKTNSVEPHGPPQTARQAHHGHTAGTTVVNPKTLLQFQLLQPVTL*
Ga0134085_103629203	3300015359	Grasslands Soil	SVSVNGHNVAVKTNSVQPGSPPMTARQAQYGHTAGTSVVNPGTQMQFQLLQAVTL*
Ga0134085_103703872	3300015359	Grasslands Soil	ELASVSVNGRNVAVKTTSVEPHGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPVTL*
Ga0132258_118229283	3300015371	Arabidopsis Rhizosphere	ANSRKSGPLAVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLQFQLLQPVTL*
Ga0132256_1000757491	3300015372	Arabidopsis Rhizosphere	TSSRANSRKSGPLAVELASIDLNGRRTTVKTNDVQPAGPPQTGRQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0132256_1026619381	3300015372	Arabidopsis Rhizosphere	IDLNGRRIPVKTNSIQPGGPPQTARQAQYGHTAGTTVINPKTTLQFQLAAPLNL*
Ga0132257_1022583382	3300015373	Arabidopsis Rhizosphere	ANSRKSGPLVVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLQFQLLQPVTL*
Ga0132255_1007695641	3300015374	Arabidopsis Rhizosphere	LASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL*
Ga0182037_116140281	3300016404	Soil	TVELTSVSVNGRNVAVKTNSVQPGGPPQTARQAQYGHTAGTTVVNPGSKMQFQLLQAATF
Ga0134069_11809362	3300017654	Grasslands Soil	SSRRNPRRSEPLAVELTSVSMNGRKVALKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVSL
Ga0193710_10128922	3300019998	Soil	SRKSGPLAVELASIDLNGRRTTVKTNDVQPAGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVSL
Ga0193724_10840271	3300020062	Soil	FGKISSSRRNPRRSEPLAVELTSVSVNGRKVAVKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL
Ga0179594_104151752	3300020170	Vadose Zone Soil	KIHSSRRNPRKSEALSMELTLVEVNGRRVPVKTNTVEPHGPPQTGRQAQYGHTAGTTVVNPKTLLQFQLRQPVAL
Ga0207673_10619421	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	RNPRKSEPLAVELMSVSVNGRKVAVKTSPVAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL
Ga0207697_101825392	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	SRANSRKSGPLAVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLQFQLLQPVTL
Ga0207697_104462761	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	SRRNPRKSEPLSVELISVEVNGRRVSVKTNTVEPHGPPQTARQAHYGHTAGTTVVNPKTTLQFQLLQPVTL
Ga0207701_101783991	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	FGKVTSSRANSRKSGPLAVELASIDLNGRRTTVKTNDVQPAGPPQTGRQAHYGHTAGTTVVNPQTLLQFQLLQPVTL
Ga0207701_102898451	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLHFQLLQPVTL
Ga0207701_109082382	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTVLQFQLLQPVTL
Ga0207644_103389341	3300025931	Switchgrass Rhizosphere	LTSVSVNGRKVAVKTSPVAPHGPPQTARQAHYGHTSGTTVVNPQTLLQFQLLQPVTL
Ga0207661_112442302	3300025944	Corn Rhizosphere	SRANSRKSGPLAVELASIDLNGRRTTVKTNDVQPAGPPQTGRQAHYGHTAGTTVVNPQTLLQFQLLQPVTL
Ga0209688_10362152	3300026305	Soil	NPRKSGPLTVALASIDLNGRRIPVKTNSVQPEGPPQTARQAHYGHTAGTTVVNPKTTLQFQLAAPLNL
Ga0209808_12024191	3300026523	Soil	ASVSVNGRNVAVKTNSVEPRGPPQTARQARYGHTAGTTVVNPGTRMQFQLLQPVNL
Ga0209058_11092451	3300026536	Soil	LFPLVLIRANPGHSVELASIEVNGRRIPVKTTSVEPAGGPQTGRQAHYGHTGGTTVVNPGSTMQFQLLQPVTF
Ga0209474_101747594	3300026550	Soil	ELASIDVNGRRIPVKTSSVQPAGPPQTARQAQYGHTAGTTVVNPGTKMQFQLVQAVTL
Ga0209983_10038461	3300027665	Arabidopsis Thaliana Rhizosphere	VELASIDVNGRRIPVKTSSVQPASPPQTARQAHYGHTAGTTVVNPKTTLQFQLLQAVTF
Ga0209971_10293032	3300027682	Arabidopsis Thaliana Rhizosphere	FGKVSSSRRNPRKSEPLSVELTSVEMNGRRIPVKTNSVEPHGPPQTARQAQYGHTAGTTVVNPKTTLQFQLLQPVTL
Ga0209814_105042841	3300027873	Populus Rhizosphere	ELNGRKIPIKTDDVQPGGPPQTARQARYGHTAGTTVVNPGTRLQFQLLQPVTL
Ga0307287_103895551	3300028796	Soil	SVNGRNVAVKTNAFQPGNPPKTGRQAQYGHTAGTLMITPGTLLQFQLLQPVTL
Ga0075377_117142651	3300030844	Soil	LTVELDLIDLNGRRIPVKTNSIQPAGPPQTARQAQYGHTAGTTVVNPKTTLQFQLTAPLN
Ga0170820_141217871	3300031446	Forest Soil	NVAVKTNSVQPGSPPQTARQAQYGHTAGTTVVNPGSKMQFQLVQAATL
Ga0170818_1065043562	3300031474	Forest Soil	ANSHKSGPLVVELASIDLNGRRTTVKTNDVQPGGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVTL
Ga0306922_106235162	3300032001	Soil	TKAFGKVSSSRRNPRKSEPLSVELTHVSVNGRKVAVKTSPIEPHGPPQTARQAHYGHTAGTTVVNPKTLLQFRLLQPATL
Ga0310810_109570041	3300033412	Soil	SSRRNPRRSEALAVELTFLSVNGHRVAVKTSAIAPHGPPQTARQAHYGHTAGTTVVNPQTLLQFQLLQPVAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075173

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences