Metagenome / Metatranscriptome Family F075136

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075136
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	120 residues
Representative Sequence	RDGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Number of Associated Samples	102
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.69 %
% of genes near scaffold ends (potentially truncated)	96.64 %
% of genes from short scaffolds (< 2000 bps)	90.76 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.118 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (30.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.496 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.97% β-sheet: 0.00% Coil/Unstructured: 34.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00069	Pkinase	38.66
PF07714	PK_Tyr_Ser-Thr	9.24
PF14332	DUF4388	0.84
PF08757	CotH	0.84
PF13646	HEAT_2	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	191.60
COG5337	Spore coat protein CotH	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.12 %
Unclassified	root	N/A	5.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.43 %
Unclassified	root	N/A	5.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	59.66 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	11.76 %
Unclassified	root	N/A	5.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	59.66 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	11.76 %
Unclassified	root	N/A	5.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	45.38 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	11.76 %
Unclassified	root	N/A	5.88 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	4.20 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	11.76 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	9.24 %
Unclassified	root	N/A	5.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.20 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	11.76 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	5.88 %
Unclassified	root	N/A	5.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.20 %
Sorangiineae incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis	3.36 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	11.76 %
Unclassified	root	N/A	5.88 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	5.04 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.20 %
Minicystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis	3.36 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	11.76 %
Unclassified	root	N/A	5.88 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	5.04 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.20 %
Minicystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis → Minicystis rosea	3.36 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320006\|FACEOR_FYWIORV02HL7IW	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	504	Open in IMG/M
2170459015\|G14TP7Y02G051H	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	728	Open in IMG/M
3300000891\|JGI10214J12806_11308535	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300004463\|Ga0063356_100583829	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1505	Open in IMG/M
3300004463\|Ga0063356_104089124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	628	Open in IMG/M
3300004463\|Ga0063356_104771753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	583	Open in IMG/M
3300004463\|Ga0063356_105239235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	557	Open in IMG/M
3300004479\|Ga0062595_101506408	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005093\|Ga0062594_101035867	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005093\|Ga0062594_102122467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	605	Open in IMG/M
3300005163\|Ga0066823_10146778	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	519	Open in IMG/M
3300005331\|Ga0070670_102073662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	524	Open in IMG/M
3300005333\|Ga0070677_10781520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	544	Open in IMG/M
3300005338\|Ga0068868_101633753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	606	Open in IMG/M
3300005341\|Ga0070691_10017040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3343	Open in IMG/M
3300005354\|Ga0070675_100413155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1205	Open in IMG/M
3300005355\|Ga0070671_100616774	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300005437\|Ga0070710_11502862	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	506	Open in IMG/M
3300005456\|Ga0070678_101124857	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005466\|Ga0070685_10295726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1089	Open in IMG/M
3300005526\|Ga0073909_10250706	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005526\|Ga0073909_10698405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	508	Open in IMG/M
3300005543\|Ga0070672_101430586	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005547\|Ga0070693_101240830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	574	Open in IMG/M
3300005563\|Ga0068855_100430647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1442	Open in IMG/M
3300005614\|Ga0068856_100249648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1790	Open in IMG/M
3300005618\|Ga0068864_101273782	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005944\|Ga0066788_10092095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	745	Open in IMG/M
3300005950\|Ga0066787_10086429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	652	Open in IMG/M
3300005995\|Ga0066790_10248938	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300006176\|Ga0070765_100217051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1742	Open in IMG/M
3300006176\|Ga0070765_101184105	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300006881\|Ga0068865_101106795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	698	Open in IMG/M
3300009678\|Ga0105252_10023476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2225	Open in IMG/M
3300010359\|Ga0126376_11327874	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	741	Open in IMG/M
3300010366\|Ga0126379_10139101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2241	Open in IMG/M
3300010403\|Ga0134123_10740304	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	967	Open in IMG/M
3300010877\|Ga0126356_10675628	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300011415\|Ga0137325_1032692	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1066	Open in IMG/M
3300012172\|Ga0137320_1067022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	754	Open in IMG/M
3300012212\|Ga0150985_102559602	Not Available	538	Open in IMG/M
3300012212\|Ga0150985_110280621	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300012469\|Ga0150984_122822524	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1123	Open in IMG/M
3300012951\|Ga0164300_10399632	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	755	Open in IMG/M
3300012971\|Ga0126369_12999272	Not Available	553	Open in IMG/M
3300012982\|Ga0168317_1099712	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	636	Open in IMG/M
3300012984\|Ga0164309_10989538	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	692	Open in IMG/M
3300013105\|Ga0157369_11363792	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	722	Open in IMG/M
3300013105\|Ga0157369_11609599	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	660	Open in IMG/M
3300013296\|Ga0157374_10647624	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1068	Open in IMG/M
3300013296\|Ga0157374_12352719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	560	Open in IMG/M
3300013308\|Ga0157375_11146870	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	911	Open in IMG/M
3300015373\|Ga0132257_101139293	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	986	Open in IMG/M
3300015374\|Ga0132255_105489815	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300016341\|Ga0182035_10499817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1038	Open in IMG/M
3300016422\|Ga0182039_12126947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300017965\|Ga0190266_10133121	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300018072\|Ga0184635_10324676	Not Available	597	Open in IMG/M
3300018073\|Ga0184624_10041452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1828	Open in IMG/M
3300018481\|Ga0190271_10199929	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1988	Open in IMG/M
3300018481\|Ga0190271_10449925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1392	Open in IMG/M
3300019361\|Ga0173482_10558738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis → Minicystis rosea	567	Open in IMG/M
3300020082\|Ga0206353_10339650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1438	Open in IMG/M
3300021181\|Ga0210388_11263741	Not Available	624	Open in IMG/M
3300021403\|Ga0210397_10609375	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300021404\|Ga0210389_10784957	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300021406\|Ga0210386_10054427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3184	Open in IMG/M
3300021475\|Ga0210392_10144354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1619	Open in IMG/M
3300024055\|Ga0247794_10033725	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1339	Open in IMG/M
3300025464\|Ga0208076_1016546	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1263	Open in IMG/M
3300025898\|Ga0207692_10822884	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300025930\|Ga0207701_10309111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1372	Open in IMG/M
3300025930\|Ga0207701_11157087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis → Minicystis rosea	639	Open in IMG/M
3300025930\|Ga0207701_11460812	Not Available	555	Open in IMG/M
3300025940\|Ga0207691_11040192	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300025949\|Ga0207667_10038756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5084	Open in IMG/M
3300025960\|Ga0207651_10489369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1061	Open in IMG/M
3300025960\|Ga0207651_11443434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	619	Open in IMG/M
3300025981\|Ga0207640_11243515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	663	Open in IMG/M
3300026023\|Ga0207677_12013898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis → Minicystis rosea	537	Open in IMG/M
3300026078\|Ga0207702_12168280	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300026088\|Ga0207641_10776310	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300026215\|Ga0209849_1049189	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	737	Open in IMG/M
3300027884\|Ga0209275_10026426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2643	Open in IMG/M
3300028138\|Ga0247684_1038164	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300028380\|Ga0268265_10294437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1458	Open in IMG/M
3300028811\|Ga0307292_10366180	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	610	Open in IMG/M
3300028876\|Ga0307286_10243633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	658	Open in IMG/M
3300028906\|Ga0308309_10060041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2786	Open in IMG/M
3300030000\|Ga0311337_11372549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	619	Open in IMG/M
3300030010\|Ga0302299_10677120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	507	Open in IMG/M
3300031170\|Ga0307498_10222119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	671	Open in IMG/M
3300031231\|Ga0170824_109686703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sorangiineae incertae sedis → Minicystis → Minicystis rosea	542	Open in IMG/M
3300031235\|Ga0265330_10481296	Not Available	528	Open in IMG/M
3300031595\|Ga0265313_10120079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1147	Open in IMG/M
3300031679\|Ga0318561_10252855	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300031680\|Ga0318574_10934239	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031716\|Ga0310813_10045624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3201	Open in IMG/M
3300031716\|Ga0310813_11335660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	663	Open in IMG/M
3300031744\|Ga0306918_11249509	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300031770\|Ga0318521_10163614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1269	Open in IMG/M
3300031805\|Ga0318497_10485214	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	692	Open in IMG/M
3300031831\|Ga0318564_10040837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2003	Open in IMG/M
3300031910\|Ga0306923_10518401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1347	Open in IMG/M
3300031912\|Ga0306921_10788472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1086	Open in IMG/M
3300031938\|Ga0308175_100691546	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1107	Open in IMG/M
3300031939\|Ga0308174_10271195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1326	Open in IMG/M
3300031939\|Ga0308174_10451002	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300031939\|Ga0308174_10933429	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300032001\|Ga0306922_11581314	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	653	Open in IMG/M
3300032009\|Ga0318563_10112439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1445	Open in IMG/M
3300032009\|Ga0318563_10733803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	530	Open in IMG/M
3300032013\|Ga0310906_10761371	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	681	Open in IMG/M
3300032074\|Ga0308173_10491412	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1097	Open in IMG/M
3300032094\|Ga0318540_10147325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1127	Open in IMG/M
3300032955\|Ga0335076_10112416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2650	Open in IMG/M
3300033550\|Ga0247829_11239256	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300034130\|Ga0370494_149134	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	599	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.91%
Host-Associated	Host-Associated	30.25%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.71%
Plants	Host-Associated → Plants	30.25%
Aquatic	Environmental → Aquatic	4.20%
Solid Waste	Engineered → Solid Waste	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.45%
Sediment	Environmental → Aquatic → Sediment	4.20%
Peat	Environmental → Terrestrial → Peat	1.68%
Geologic	Environmental → Terrestrial → Geologic	0.84%
Grass	Engineered → Solid Waste → Grass	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.24%
Loam	Environmental → Terrestrial → Soil → Loam	8.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.68%
Mine	Environmental → Terrestrial → Geologic → Mine	0.84%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.84%
Composting	Engineered → Solid Waste → Grass → Composting	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.24%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.84%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.84%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.20%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.36%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.68%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.84%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.84%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.84%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320006	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORE_3491200	2032320006	Soil	RSLQTTEERASAGYLTGRALSMARLGALAGFCERKGDEESTRLLGVEIMTQERRYYETGKAMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGRRR
4PV_00168680	2170459015	Switchgrass, Maize And Mischanthus Litter	GVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
JGI10214J12806_113085351	3300000891	Soil	LGVPAYDPRDGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0063356_1005838292	3300004463	Arabidopsis Thaliana Rhizosphere	DGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDGDSARLLGVDILSQERGYYERGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0063356_1040891241	3300004463	Arabidopsis Thaliana Rhizosphere	SKLFAFHRSLQTTEERASAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0063356_1047717531	3300004463	Arabidopsis Thaliana Rhizosphere	GYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYELGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0063356_1052392352	3300004463	Arabidopsis Thaliana Rhizosphere	DGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0062595_1015064081	3300004479	Soil	SAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVPTEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0062594_1010358672	3300005093	Soil	SSAGYVTGKALSMARLGALSALSQQKGDDESTQLLGVDMLSEERRYYELGKRMLIAVATTEESQARARRAAYRTLELAGETAEPLQLRKALGRRR*
Ga0062594_1021224672	3300005093	Soil	GVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVAIEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0066823_101467781	3300005163	Soil	YDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQILVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0070670_1020736621	3300005331	Switchgrass Rhizosphere	VVGYDPRDGGYSKLFAFQRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVASEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0070677_107815201	3300005333	Miscanthus Rhizosphere	LEMKLSLAEQCGDSARQCRRVLARLEALGAAGYDPRAGGYSKLFAFLRSLQTAEERSSAGYVTGKALSMARLGALSAFSQQKGDDESTQLLGVDMLSEERRYYEMGKTMLITVATTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0068868_1016337531	3300005338	Miscanthus Rhizosphere	EQCGDGARQCRQLVARLAELGTPAYDPREGGYSKLFAFLRSLQTAEERSAAGYVTAKGLAMARLSMLSTFVTEKGDTATAGLLNELLAQERRYYEEGKRLLAEAATNEESQARGRRSAYRTLELATEMAEPLALRKLLPKRR*
Ga0070691_100170403	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	YDPRDGGYSKLFAFQRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGRRR*
Ga0070687_1014553811	3300005343	Switchgrass Rhizosphere	RHGGYSKVFAFLRSLQTPEERSSAGHVTGKALSMARLEAMATFCDAKGDAETAQLLRDQLCADERRYYEEGKRILSISAATEESQARARRAAYRTLELAADMHEPIQLRKILLKRR*
Ga0070675_1004131552	3300005354	Miscanthus Rhizosphere	MGVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRRSG*
Ga0070671_1006167742	3300005355	Switchgrass Rhizosphere	YSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERQGDADSARLLGVEIMTQERRYYEHGKQILVGAVATEESQARARRAAYRTLELAGETLEPLQLRKALGKRR*
Ga0070710_115028621	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AFWRSLQTPEERSSAGYVTGKALSVARLTALSAFCAARGDEESARLLGTDMVAEERRYYDEGRVLLTGAATTEESQARGRRAAYRTLELAGETVEPLALRRSLGRRR*
Ga0070678_1011248571	3300005456	Miscanthus Rhizosphere	AEQCGDSARQCRKLSERLLALGVVGYDPRDGGYSKLFAFQRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDDDSARLLGVDILSQERRYYELGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0070685_102957261	3300005466	Switchgrass Rhizosphere	PRDGGYSKLFAFHRSLQTTEERASAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGRRR*
Ga0073909_102507061	3300005526	Surface Soil	EMKLSLAEQCGDSARQCRKLSERLVAVGVAAYDPRAGGYSKLFAFLRSLQTTEERASAGYLTGRALSMARLGALAGFCERKGDAESAGLLGVEIMTQERRYYETGKAMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0073909_106984051	3300005526	Surface Soil	EQCGDSARQCRRLSARLTAVGVAGYDPREGGYSKLFAFLRSLQTPEERSSAGYLTGKALSMARLGALARFCEGKGDAESAHLLGGEIVDLERHYYEQGKQMLITAAGTEESQARARRAAYRTLELAGETVEPLQLRKALGRRR*
Ga0070672_1014305862	3300005543	Miscanthus Rhizosphere	RSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVDILSQERGYYERGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0070693_1012408301	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	DPRDGGYSKLFAFQRSLATPEERSSAGYVTGKALSAARLGALAAFCASRGDEESARLLGTDIVADERRYYDEGRQMLVAAATAEESQARARRAAYRTLELAGEIVEPLALRRSLGRRR*
Ga0068855_1004306471	3300005563	Corn Rhizosphere	LAEQCGDGARQCRRLSARLTALGGPPFDPRDGGYSKLFAFQRSLQTPEERSSAGYVTGKTLSAARLGALAAFCASRGDEESARLLGTDIVADERRYYDEGRLMLIASATAEESQARARRAAYRTLELAGEIVEPLALRRSLGRRR*
Ga0068856_1002496481	3300005614	Corn Rhizosphere	FWRSLQTPEERSSAGYVTGKALSVARLTALSAFCAARGDEESARLLGTDMVAEERRYYDEGRVLLTGAATTEESQARGRRAAYRTLELAGETVEPLALRRSLGRRR*
Ga0068864_1012737821	3300005618	Switchgrass Rhizosphere	GVADYDPRNGGYSKLFAFLRSLQTPEERSSAGYLTGKALSMARLAALSAFCAQKGDAESARLLGAEIAEEERRYYEEGQRLLVAATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRK*
Ga0066788_100920951	3300005944	Soil	RISARLTALGGAEYDPRNGGYSKLFAFLRSLQTAEERSAAGYVTGKALSMARLAALSAFCAQKGDAESARLLGSEIGEEERRYYEEGRRLLIGVTATEESQARARRSAYRTLELAGETVEPLALRKTLNKRR*
Ga0066787_100864292	3300005950	Soil	LQTPEERASAGYVAGKALSMARLRALGGFCQDKGDPESARLMSEEILDEERRYYEEGKRMLIAVTTTEESQARARRSAYRTLELAGETVEPLALRKTLGKRR*
Ga0066790_102489382	3300005995	Soil	GGYSKLFAFLRSLQTAEERSAAGYVTAKALSMARLNALAAVCRDKGDDLSASLLAETLLSQERRYYEEGKRLLTAAATNEESQARGRRSAYRTLELATEMVEPLQLRKLLPKKR*
Ga0070765_1002170511	3300006176	Soil	EQCGDGARECRRLSARLAALGVLGYDPREGGYSKLFAFLRSLQTPEERASAGYVAGKAWSMARLTALGGFCRDKGDAESAALLAEEILDEERRYYDEGKRLLVAVATTEESQARARRSAYRTLELAGETVEPLQLRKTLGKRR*
Ga0070765_1011841051	3300006176	Soil	LAEQCGDGARQCRAVMARLDALGQGPYDPRSGGYSKLFAFLRSLQTAEERAAAGYVTSKALSMARLNALAATCRDKGDAETASLLADTLLSQERRYYEEGKILLVAVATNEESQARGRRSAYRTLELATEMVEPLQLRKLLPKKR*
Ga0068865_1011067952	3300006881	Miscanthus Rhizosphere	YSKSFAFLRSLQTPEERSSAGYVTGKALTMARLGALISFCEGQGDASSARLLAEISDEERRYYEQGKGMLAAAALTEESQARGRRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0105252_100234762	3300009678	Soil	LAEQCGDSARQCRKLSERLVAMGVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGESARLLGVEIMTQERRYYEQGKQMLVAAVASEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0126376_113278742	3300010359	Tropical Forest Soil	QTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVDIMGQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0126379_101391012	3300010366	Tropical Forest Soil	GDGARQCRRLAARLGELGVTGYDPRDGGYSKLFAFLRSLQTAEERAAAGYVTGKALSMARLTALASLCAEKGDSDSARLLGDELVSAERRYYEEGKRTLAVWASSEESQARARRSAYRTLELAGEMAEPLQLRKVLPKRR*
Ga0134123_107403042	3300010403	Terrestrial Soil	EMKLSLAEQCGDGARQCRQLVARLAELGTPAYDPREGGYSKLFAFLRSLQTAEERSAAGYVTAKALSMARLSTLAAFVSEKGDAVTARLLSEDLLAAERHYYEEGKRLLALAATNEESQARGRRSAYRTLELANEMMEPLALRKILPKKR*
Ga0126356_106756281	3300010877	Boreal Forest Soil	MKLSLAEQCGDGAKQCRKVTARLVALGQEAYDPRHGGYSKLFAFLRSLQTAEERSAAGYVTAKALSMARLTALAAVCRDKGDVETAALLADDLLSQERRYYEEGKGLLALVALNEESQARGRRSAYRTLELATEATEPLQLRKLLPKKR*
Ga0137325_10326922	3300011415	Soil	KLSERLATMGVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYELGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRRSG*
Ga0137320_10670222	3300012172	Soil	KLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAEFCERKGDGDSAHLLGVDILGQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKCR*
Ga0150985_1025596021	3300012212	Avena Fatua Rhizosphere	EMKLSLAEQCGDGARQVRRLAARLGELGMPNYDPREGGYSKLFAFLRSLQTAEERSAAGYMTARSLSIARLKTLAAFCAEKGDSDTARLLGEEVVATDQRYYDQGLVMLVGVTATEESQARARRSAYRTLELATEMSEPLQLRKAMAKRRYRSAQLGHVNRR*
Ga0150985_1102806211	3300012212	Avena Fatua Rhizosphere	MKLSLAEQCGDGARQCRQVAARLAELGLPAYDPREGGYSKLFAFLRSLQTPQERAAAGYVTHKSLSIARLQALMTFCSDKGDAQTARLLAEGILAHERRYYEEGKRLLEQVALNEESQARGRRSAYRTLELANEMVEPLQLRKLLPKRR*
Ga0150984_1228225242	3300012469	Avena Fatua Rhizosphere	LALGVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERQGDPDSARLLGVEIMTQERRYYEHGKQILVGAVATEESQARARRAAYRTLELAGETTEPLQLRKALGKRR*
Ga0164300_103996322	3300012951	Soil	LQTTEERSSAGYVTGRALSMARLGALAGFCESKGDDDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0126369_129992721	3300012971	Tropical Forest Soil	SVAEQCGDGARQCRRLAARLGELGVPNYDPRDGGYSKLFAFLRSLQTPEERSAAGYVTGKALSMARLRTLASLCAEKGDSETARLLGEEILATEQHYYDQGKVMLLAVAGSEESQARARRSAFRTLELATEMTEPLQLRKAMAKRR*
Ga0168317_10997122	3300012982	Weathered Mine Tailings	TPEERSSAGYVTGKALSSARLGALAAFCSSHGDEESAQLLGTDIVSEERRYYDEGRKLLIGAATTEESQARARRAAYRTLELAGEIVEPLALRRTLSRRR*
Ga0164309_109895381	3300012984	Soil	FAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDGDSARLLGVDIMVQERRYYEQGKQMLVAAVPTEESQARARRAAYRTLELAGETVEPLALRKTLGKRR*
Ga0157369_113637921	3300013105	Corn Rhizosphere	AGYDPRHGGYSKVFAFLRSLQTPEERSSAGLLTGKALSMARLEAMATFCDNKGDADTAHLFRNELAIDERRYYEEGRRILSSTAATEESQARARRAAYRTLELAGDMNEPIQLRKILLKKR*
Ga0157369_116095991	3300013105	Corn Rhizosphere	SAGYVTGKALSAARLGALAAFCASRGDEESARLLGTDIVADERRYYDEGRLMLIASATAEESQARARRAAYRTLELAGEIVEPLALRRSLGRRR*
Ga0157374_106476241	3300013296	Miscanthus Rhizosphere	LSLAEQCGDSARQCRRLSERLIALGVPAYDPRDGGYSKLFAFQRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVASEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0157374_123527191	3300013296	Miscanthus Rhizosphere	EERSSAGYVTGRALSMARLGALAGFCERKGDGDSARLLGVEIMAQERRYYEQGKSMLVGAVASEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0157375_111468701	3300013308	Miscanthus Rhizosphere	LRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVDILSQERGYYERGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0132257_1011392931	3300015373	Arabidopsis Rhizosphere	LFAFQRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDDDSARLLGVDILSQERRYYEQGKQMLVAAVASEESQARARRAAYRTLELAGETVEPLQLRKALGKRR*
Ga0132255_1054898152	3300015374	Arabidopsis Rhizosphere	KLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR*
Ga0182035_104998172	3300016341	Soil	EGGYSKLFAFLRPLQTAEERSSAGFVTGKALSIARLAVLGGFCDAKGDAESARLLGVEILGEERRYYEDGKQLLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0182039_121269472	3300016422	Soil	SSAGFVTGKALSIARLAVLGGFCDAKGDAESSRLLGVELLGEERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0190266_101331212	3300017965	Soil	VLSRLEALGVAGYDPRAGGYSKLFAFLRSLQTPEERSSAGYVTGKALSMARLGALAALSQQKGDDESTQLLGVDMLGEERRYYELGKRMLIAVATTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0184635_103246761	3300018072	Groundwater Sediment	SLAEQCGDSARQCRRVLARLEALGVAGYDPRDGGYSKLFAFLRSLQTAEERSSAGYVTGKALSMARLGALSAFSQQKGDDDSTQLLGVDMLSEERRYYEMGKRMLIAVATTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0184624_100414522	3300018073	Groundwater Sediment	LGVVGYDPRAGGYSKLFAFLRSLQTPEERSSAGYVTGKALSMARLGALSALSQQKGDDESTQLLGVDMLSEERRYYDLGKRMLIAVATTEESQARARRAAYRTLELAGETAEPLQLRKALGRRR
Ga0190271_101999292	3300018481	Soil	GYDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGESARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0190271_104499252	3300018481	Soil	ARQCRRVLSRLETLGVAGYDPRAGGYSKLFAFLRSLQTPEERSSAGYVTGKALSMARLGALAALSQQKGDDESTELLGVDMLSEERRYYELGKRMLIAVATTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0173482_105587381	3300019361	Soil	LEMKLSLAEQCGDSARQCRRLSERLIGLGVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0206353_103396502	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	FAFQRALQTPEERSSAGYVTGKALSAARLGALADFCASRGDEESARLLGTDIVADERRYYDEGRLMLIASATAEESQARARRAAYRTLELAGEIVEPLALRRSLGRRR
Ga0210388_112637412	3300021181	Soil	TPEERSSAGYLTGKALSMARLAALSAFCAQKGDAESARLLGAEIAEEERRYYEEGRRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0210397_106093752	3300021403	Soil	EQCGDGARQCRRLSGRLTALGVPEYDPRNGGYSKLFAFLRALQTPEERSSAGYVTGKALSMARLGALSAFCAEKGDAESARLLGAEIVGEERRYYEEGTRLLVAATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0210389_107849572	3300021404	Soil	LQTPEERSSAGYVTGKALSMARLAALSAFCTQKGDAESARLLGAEIAEEERRYYEEGRRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0210386_100544271	3300021406	Soil	CGDGARQCRRLSARLVELGVVDYDPRNGGYSKLFAFLRSLQTPEERSSAGYVTGKALSMARLAALSAFCAQKGDAESARLLGAEIAEEERRYYEEGQRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0210392_101443541	3300021475	Soil	VADYDPRNGGYSKLFAFLRSLQTPEERSSAGYVTGKALSMARLAALSAFCAQKGDAESARLLGAEIAEEERRYYEEGQRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0247794_100337252	3300024055	Soil	QCGDSARQCRRLSERLIALGVPAYDPRDGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0208076_10165461	3300025464	Arctic Peat Soil	FAFLRSLQTPEERASAGYVAGKALSIARLTALGDFCEDKGDAESAHLMAVEILDEERRYYEEGKRMLIAVTTTEESQARARRSAYRTLELAGETVEPLQLRKSLGKRR
Ga0207692_108228842	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AFWRSLQTPEERSSAGYVTGKALSVARLTALSAFCASRGDEESARLLGTDMVAEERRYYDEGRVLLTGAATTEESQARGRRAAYRTLELAGETVEPLALRRSLGRRR
Ga0207701_103091112	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVDILSQERGYYERGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0207701_111570871	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VLARLEALGVAGYDPRAGGYSKLFAFLRSLQTAEERSSAGYVTGKALSMARLGALSALSQQKGDDESTQLLGVDMLSEERRYYELGKRMLIAVATTEESQARARRAAYRT
Ga0207701_114608121	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDCARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0207691_110401921	3300025940	Miscanthus Rhizosphere	RSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVDILSQERGYYERGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0207667_100387561	3300025949	Corn Rhizosphere	SAGYVTGKALSAARLGALADFCASRGDEESARLLGTDIVAEERRYYDEGRQLLIAAATTEESQARARRAAYRTLELAGEIVEPLALRRSLGRRR
Ga0207651_104893692	3300025960	Switchgrass Rhizosphere	YSKLFAFLRSLQTPEERSSAGYVTGKALSMARLGALSALSQQKGDDESTQLLGVDMLSEERRYYELGKRMLIAVATTEESQARARRAAYRTLELAGETAEPLQLRKALGRRR
Ga0207651_114434342	3300025960	Switchgrass Rhizosphere	SAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVDIMGQERRYYEQGKQMLVAAVPTEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0207640_112435152	3300025981	Corn Rhizosphere	TEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGRRR
Ga0207677_120138981	3300026023	Miscanthus Rhizosphere	MKLSLAEQCGDSARQCRRLSERLIALGVPAYDPRDGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0207702_121682801	3300026078	Corn Rhizosphere	LRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGRRR
Ga0207641_107763101	3300026088	Switchgrass Rhizosphere	LLALGVVGYDPRDGGYSKLFAFQRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDDDSARLLGVDILSQERRYYELGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0209849_10491892	3300026215	Soil	ARLTALGGAEYDPRNGGYSKLFAFLRSLQTAEERSAAGYVTGKALSMARLAALSAFCAQKGDAESARLLGSEIGEEERRYYEEGRRLLIGVTATEESQARARRSAYRTLELAGETVEPLALRKTLNKRR
Ga0209275_100264263	3300027884	Soil	AFLRSLQTAEERSAAGYVTGKALSMARLAALSAFCAQKGDAESARLLGSEIVEEERRYYEEGRRLLIGVTATEESQARGRRAAYRTLELAGETVEPLALRKTLNKRR
Ga0247684_10381642	3300028138	Soil	EERSSAGYVTGRALSMARLGALAGFCERKGDDETARLVGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0268265_102944372	3300028380	Switchgrass Rhizosphere	FAFHRSLQTTEERASAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGRRR
Ga0307292_103661801	3300028811	Soil	AEQCGDSARQCRRLSERLGALGVTGYDPRDGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDDDSSHLLGVDILGQERRYYEQGKQMLVAAVASEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0307286_102436332	3300028876	Soil	VTMGVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0308309_100600413	3300028906	Soil	DCDDLEMKLSLAEQCGDGARECRRLSARLAALGVLGYDPREGGYSKLFAFLRSLQTPEERASAGYVAGKAWSMARLTALGGFCRDKGDAESAALLAEEILDEERRYYDEGKRLLVAVATTEESQARARRSAYRTLELAGETVEPLQLRKTLGKRR
Ga0311337_113725492	3300030000	Fen	YLTGKALSMARLAALSAFCTQKGDAESARLLGAEIAEEERRYYQEGQRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLNKRR
Ga0302299_106771202	3300030010	Fen	AFLRSLQTPEERSSAGYLTGKALSMARLAALSAFCTQKGDAESARLLGAEIAEEERRYYQEGQRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLNKRR
Ga0307498_102221192	3300031170	Soil	QCRKLSERLVAMGVAGYDPRDGGYSKLFAFLRSLQTTEERSSAGYLTGRALSMARLGALAGFCERKGDGDRARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0170824_1096867031	3300031231	Forest Soil	FAFLRSLQTPEERSSAGYLTGKALSMARLAALSAFCAQKGDAESARLLGAEIAEEERRYYEEGQRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0265330_104812962	3300031235	Rhizosphere	ARLEALGQPPFDPRAGGYSKLFAFLRSLQTPEERSAAGYVTGKALSMARLGALAALCREKGDGQTASLLADTLLSQERRYYEEGKRLLTAVALNEESQARGRRSAYRTLELATEMVEPLQLRKLLPKKR
Ga0265313_101200792	3300031595	Rhizosphere	AGYVTGKALSIARLEALGAFCAGKGDDESARLLSTEFVEEDRRYYDEGRRMLIAAAATEESQARARRAAYRTLELAGETVEPLQLRKSLGKRR
Ga0318561_102528552	3300031679	Soil	FDPREGGYSKLFAFLRPLQTAEERSSAGFVTGKALSIARLAVLGGFCDAKGDAESSRLLGVELLGEERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318574_109342392	3300031680	Soil	SSAGYVTGKALSIARLAALGSFCDAKGDAESARLLGVEILGEERRYYEDGKQLLTAAAGTEESQARARRAAFRTLELAGETVEPLQLRKAFGRRRSLV
Ga0310813_100456241	3300031716	Soil	RDGGYSKLFAFLRSLQTTEERSSAGYVTGRALSMARLGALAGFCERKGDADSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0310813_113356602	3300031716	Soil	FAFLRSLQTIEERSSAGYLTGRALSMARLGALAGFCERKGDADSARLLGVEIMAQERRYYETGKAILVAAVASEESQARARRAAYRTLELAGETAEPLQLRKALGKRR
Ga0306918_112495092	3300031744	Soil	TAEERSSAGFVTGKALSIARLAVLGGFCDAKGDAESSRLLGVELLGEERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318521_101636141	3300031770	Soil	SKLFAFLRPLQTAEERSSAGFVTGKALSIARLAVLGGFCDAKGDAESSRLLGVELLGEERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318497_104852142	3300031805	Soil	GYSKLFAFLRSLQTAEERSSAGYMTGKALSMARLGALGAFCAAKGDAESARLLGTEIVEEERRYYEEGMRLLIGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0318564_100408371	3300031831	Soil	SKLFAFLRPLQTAEERSSAGYVTGKALSIARLAALGSFCDAKGDAESARLLGVEILGEERRYYEDGKQLLTAAAGTEESQARARRAAFRTLELAGETVEPLQLRKAFGRRRSLV
Ga0306923_105184011	3300031910	Soil	EVGVAGFDPREGGYSKLFAFLRPLQTAEERSSAGFVTGKALSIARLAVLGGFCDAKGDAESSRLLGVELLGEERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0306921_107884721	3300031912	Soil	EGGYSKLFAFLRPLQTAEERSSAGYVTGKALSIARLAALGSFCDAKGDAESARLLGVEILGEERRYYEDGKQLLTAAAGTEESQARARRAAFRTLELAGETVEPLQLRKAFGRRRSLV
Ga0308175_1006915462	3300031938	Soil	AEQCGDGARQCRRLSARLTALGLPDYDPRNGGYSKLFAFLRSLQTSEERSSAGYVTGKALSMARLGALGAFCTVKGDAESSRLLGAEILEEERRYYDEGLRLLIGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0308174_102711952	3300031939	Soil	RRLSARLAALGVSDYDPRNGGYSKLFAFLRALQTPEERSSAGYVTGKALSMARLGALGAFCTEKGDAESARLLGTEIVGEERRYYDEGIRLLVSATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0308174_104510021	3300031939	Soil	RQCRRLSARLLALGVADYDPRNGGYSKLFAFLRSLQTPEERSSAGYVTGKALSMARLAALSAFCAQKGDAESARLLGAEIAEEERRYYEEGQRLLVAATVTEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0308174_109334292	3300031939	Soil	PEERSSAGYVTGKALSMARLAALSAFCTQKGDAESARLLGAEIAEEERRYYEEGQRLLVAATVTEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0306922_115813142	3300032001	Soil	FAFLRSLQTPEERSAAGYLTGKALSMARLGALAALCREKGDGQTASLLADTILSQERRYYEEGKRLLKAVATNEESQARGRRAAYRTLELATEMVEPLQLRKLLPKKR
Ga0318563_101124392	3300032009	Soil	FVTGKALSIARLAVLGGFCDAKGDAESSRLLGVELLGEERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0318563_107338031	3300032009	Soil	DLEMKLSLAEQCGDGARQCREVAARLDALGQPAYDPRHGGYSKLFAFLRSLQTAEERSAAGYVTAKALSMARLGTLAALCREKGDGQTASLLADTLLSQERRYYEEGKRLLLAAATNEESQARGRRSAYRTLELATEMVEPLQLRKLLPKKR
Ga0310906_107613711	3300032013	Soil	ARLAELGQPPFDPRAGGYSKSFAFLRSLQTPEERSSAGYVTGKALTMARLGALISFCETQGDTISARLLAEISDEERRYYEQGKGMLAAAALTEESQARGRRAAYRTLELAGETAEPLQLRKALGKRR
Ga0308173_104914122	3300032074	Soil	RLSARLTALGLPEYDPRNGGYSKLFAFLRSLQTSEERSSAGYMTGKALSMARLGALGAFCAAKGDAESARLLGAEIVEEERRYYDEGLRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLGKRR
Ga0318540_101473251	3300032094	Soil	ERSSAGFVTGKALSIARLAVLGGFCDAKGDAESSRLLGVELLGEERRYYEEGKQMLTAAAGTEESQARARRAAFRTLELANETVEPLQLRKAFGRRRSLV
Ga0335076_101124161	3300032955	Soil	RASAGYVTGRALSIARLGALSAFCATKGDTESAHLLGTEITEEERHYYEDGRRMLVAAVETEESQARARRAAFRTLELAGETVEPLQLRKAFGRRRPLV
Ga0247829_112392561	3300033550	Soil	TEERSSAGYLTGRALSMARLGALAGFCERKGDDDSARLLGVEIMTQERRYYEQGKQMLVAAVATEESQARARRAAYRTLELAGETVEPLQLRKALGKRR
Ga0370494_149134_2_385	3300034130	Untreated Peat Soil	LVALGVADYDPRNGGYSKLFAFLRSLQTPEERSSAGYLTGKALSMARLAALSAFCAQKGDAESARLLGAEIAEEERRYYEEGQRLLVGATATEESQARARRAAYRTLELAGETVEPLALRKTLNKRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075136

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences