Metagenome / Metatranscriptome Family F075130

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075130
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	144 residues
Representative Sequence	VNPVVPPGESAGIMTPAEREARWALSVRFAIEAASEAEARAILGQALARLDGELPLQGEPTITPLRLRDGIWVATLTPDLTALASVEPDDATNRCRYVSSHFGVGVGWMSRDTERVARWDWPPDIWSRSPGDDILLHPAVQAVMILCEAK
Number of Associated Samples	99
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.58 %
% of genes near scaffold ends (potentially truncated)	36.97 %
% of genes from short scaffolds (< 2000 bps)	69.75 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (49.580 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.092 % of family members)
Environment Ontology (ENVO)	Unclassified (25.210 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.420 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.66% β-sheet: 19.10% Coil/Unstructured: 61.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02133	Transp_cyt_pur	5.04
PF08241	Methyltransf_11	4.20
PF13581	HATPase_c_2	2.52
PF10686	YAcAr	2.52
PF00561	Abhydrolase_1	2.52
PF02861	Clp_N	1.68
PF10604	Polyketide_cyc2	1.68
PF06044	DpnI	0.84
PF10103	Zincin_2	0.84
PF02702	KdpD	0.84
PF06863	DUF1254	0.84
PF12697	Abhydrolase_6	0.84
PF13374	TPR_10	0.84
PF08044	DUF1707	0.84
PF13424	TPR_12	0.84
PF04951	Peptidase_M55	0.84
PF16927	HisKA_7TM	0.84
PF00589	Phage_integrase	0.84
PF02371	Transposase_20	0.84
PF00696	AA_kinase	0.84
PF06742	DUF1214	0.84
PF03703	bPH_2	0.84
PF13847	Methyltransf_31	0.84
PF00795	CN_hydrolase	0.84
PF04471	Mrr_cat	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.68
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.84
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.84
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.84
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.26 %
Unclassified	root	N/A	48.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.42 %
Unclassified	root	N/A	48.74 %
Viruses	superkingdom	All Organisms → Viruses	0.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.58 %
Unclassified	root	N/A	48.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.34 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.66 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.09 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	0.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.74 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.04 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.52 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.68 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.84 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.84 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.52 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.68 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.84 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.84 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.52 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.68 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.84 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.84 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.52 %
Actinomadura algeriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura algeriensis	1.68 %
Saccharopolyspora pogona	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	0.84 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.84 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10046690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1633	Open in IMG/M
3300003505\|JGIcombinedJ51221_10197467	Not Available	816	Open in IMG/M
3300004080\|Ga0062385_10071919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1582	Open in IMG/M
3300004082\|Ga0062384_100033082	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300004092\|Ga0062389_103684879	Not Available	575	Open in IMG/M
3300004152\|Ga0062386_100404051	Not Available	1100	Open in IMG/M
3300005435\|Ga0070714_101220465	Not Available	734	Open in IMG/M
3300005436\|Ga0070713_100487368	Not Available	1162	Open in IMG/M
3300005436\|Ga0070713_100962465	Not Available	823	Open in IMG/M
3300005445\|Ga0070708_100166818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2054	Open in IMG/M
3300005467\|Ga0070706_100196906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1882	Open in IMG/M
3300005468\|Ga0070707_100040126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4477	Open in IMG/M
3300005471\|Ga0070698_100061449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3791	Open in IMG/M
3300005518\|Ga0070699_100005208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11429	Open in IMG/M
3300005536\|Ga0070697_100017810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5594	Open in IMG/M
3300005712\|Ga0070764_10804440	Not Available	584	Open in IMG/M
3300005921\|Ga0070766_10580816	Not Available	751	Open in IMG/M
3300006176\|Ga0070765_100303232	Not Available	1477	Open in IMG/M
3300006176\|Ga0070765_100487133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura algeriensis	1158	Open in IMG/M
3300009698\|Ga0116216_10128509	Not Available	1559	Open in IMG/M
3300009698\|Ga0116216_10179701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1299	Open in IMG/M
3300009839\|Ga0116223_10773385	Not Available	550	Open in IMG/M
3300010341\|Ga0074045_10724719	Not Available	631	Open in IMG/M
3300010343\|Ga0074044_10033529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3597	Open in IMG/M
3300010379\|Ga0136449_100247708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3315	Open in IMG/M
3300010379\|Ga0136449_100614162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1849	Open in IMG/M
3300010880\|Ga0126350_10546939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300011120\|Ga0150983_15491890	Not Available	791	Open in IMG/M
3300014838\|Ga0182030_10114879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3621	Open in IMG/M
3300016294\|Ga0182041_10318825	All Organisms → Viruses → Predicted Viral	1295	Open in IMG/M
3300016387\|Ga0182040_10457384	Not Available	1013	Open in IMG/M
3300017946\|Ga0187879_10100212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1661	Open in IMG/M
3300017970\|Ga0187783_10016356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5476	Open in IMG/M
3300017975\|Ga0187782_10093641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2207	Open in IMG/M
3300018047\|Ga0187859_10194535	Not Available	1081	Open in IMG/M
3300018062\|Ga0187784_10674820	Not Available	828	Open in IMG/M
3300018062\|Ga0187784_11198812	Not Available	602	Open in IMG/M
3300018085\|Ga0187772_10359489	Not Available	1007	Open in IMG/M
3300018085\|Ga0187772_11380488	Not Available	523	Open in IMG/M
3300018086\|Ga0187769_10021332	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4302	Open in IMG/M
3300020579\|Ga0210407_10284723	Not Available	1290	Open in IMG/M
3300021171\|Ga0210405_10419152	Not Available	1054	Open in IMG/M
3300021178\|Ga0210408_10088146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2436	Open in IMG/M
3300021178\|Ga0210408_10160973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	1780	Open in IMG/M
3300021178\|Ga0210408_10234650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1460	Open in IMG/M
3300021178\|Ga0210408_10443141	Not Available	1034	Open in IMG/M
3300021362\|Ga0213882_10299327	Not Available	671	Open in IMG/M
3300021374\|Ga0213881_10001613	All Organisms → cellular organisms → Bacteria	10485	Open in IMG/M
3300021374\|Ga0213881_10095820	Not Available	1282	Open in IMG/M
3300021374\|Ga0213881_10128635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1104	Open in IMG/M
3300021374\|Ga0213881_10146397	Not Available	1033	Open in IMG/M
3300021388\|Ga0213875_10253488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	830	Open in IMG/M
3300021388\|Ga0213875_10282440	Not Available	784	Open in IMG/M
3300021433\|Ga0210391_11481392	Not Available	521	Open in IMG/M
3300021476\|Ga0187846_10142382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300021478\|Ga0210402_10077663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2947	Open in IMG/M
3300021478\|Ga0210402_11433812	Not Available	618	Open in IMG/M
3300021479\|Ga0210410_10727568	Not Available	875	Open in IMG/M
3300021559\|Ga0210409_10272484	Not Available	1529	Open in IMG/M
3300025910\|Ga0207684_10095721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2534	Open in IMG/M
3300025922\|Ga0207646_10212466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1747	Open in IMG/M
3300025928\|Ga0207700_10421398	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1173	Open in IMG/M
3300025928\|Ga0207700_11534358	Not Available	590	Open in IMG/M
3300027158\|Ga0208725_1032597	Not Available	817	Open in IMG/M
3300027729\|Ga0209248_10077965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1005	Open in IMG/M
3300027879\|Ga0209169_10034380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2680	Open in IMG/M
3300027889\|Ga0209380_10833314	Not Available	521	Open in IMG/M
3300028742\|Ga0302220_10120145	Not Available	1018	Open in IMG/M
3300028747\|Ga0302219_10021546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2402	Open in IMG/M
3300028780\|Ga0302225_10409650	Not Available	636	Open in IMG/M
3300028789\|Ga0302232_10006717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7262	Open in IMG/M
3300028906\|Ga0308309_10412512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura algeriensis	1159	Open in IMG/M
3300028906\|Ga0308309_10833181	Not Available	801	Open in IMG/M
3300028906\|Ga0308309_11889393	Not Available	504	Open in IMG/M
3300029636\|Ga0222749_10011521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3568	Open in IMG/M
3300029939\|Ga0311328_10855518	Not Available	603	Open in IMG/M
3300029951\|Ga0311371_10074406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5564	Open in IMG/M
3300030509\|Ga0302183_10408384	Not Available	520	Open in IMG/M
3300030730\|Ga0307482_1098534	Not Available	796	Open in IMG/M
3300031028\|Ga0302180_10136105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1374	Open in IMG/M
3300031090\|Ga0265760_10162513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	738	Open in IMG/M
3300031525\|Ga0302326_12889463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300031543\|Ga0318516_10013337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4036	Open in IMG/M
3300031544\|Ga0318534_10007770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5226	Open in IMG/M
3300031545\|Ga0318541_10011929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3934	Open in IMG/M
3300031546\|Ga0318538_10816417	Not Available	506	Open in IMG/M
3300031572\|Ga0318515_10058546	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300031668\|Ga0318542_10032948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2247	Open in IMG/M
3300031708\|Ga0310686_116803331	Not Available	651	Open in IMG/M
3300031708\|Ga0310686_118348816	Not Available	1007	Open in IMG/M
3300031713\|Ga0318496_10323410	Not Available	852	Open in IMG/M
3300031718\|Ga0307474_10678404	Not Available	814	Open in IMG/M
3300031723\|Ga0318493_10283838	Not Available	890	Open in IMG/M
3300031736\|Ga0318501_10007681	All Organisms → cellular organisms → Bacteria	3983	Open in IMG/M
3300031744\|Ga0306918_10010684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5191	Open in IMG/M
3300031747\|Ga0318502_10832461	Not Available	560	Open in IMG/M
3300031748\|Ga0318492_10023251	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300031751\|Ga0318494_10401658	Not Available	795	Open in IMG/M
3300031754\|Ga0307475_10611884	Not Available	872	Open in IMG/M
3300031763\|Ga0318537_10080354	Not Available	1200	Open in IMG/M
3300031765\|Ga0318554_10087517	Not Available	1743	Open in IMG/M
3300031782\|Ga0318552_10017522	All Organisms → cellular organisms → Bacteria	3119	Open in IMG/M
3300031788\|Ga0302319_10224681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2326	Open in IMG/M
3300031792\|Ga0318529_10174377	Not Available	994	Open in IMG/M
3300031798\|Ga0318523_10086796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1522	Open in IMG/M
3300031823\|Ga0307478_11282792	Not Available	609	Open in IMG/M
3300031897\|Ga0318520_10020879	All Organisms → cellular organisms → Bacteria	3117	Open in IMG/M
3300031912\|Ga0306921_10163633	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300031941\|Ga0310912_10054473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2823	Open in IMG/M
3300031945\|Ga0310913_10313391	Not Available	1108	Open in IMG/M
3300032008\|Ga0318562_10009169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4865	Open in IMG/M
3300032010\|Ga0318569_10062412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1635	Open in IMG/M
3300032035\|Ga0310911_10151862	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	1303	Open in IMG/M
3300032076\|Ga0306924_10484120	Not Available	1411	Open in IMG/M
3300032089\|Ga0318525_10090080	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300032160\|Ga0311301_10144802	All Organisms → cellular organisms → Bacteria	4331	Open in IMG/M
3300032160\|Ga0311301_10518524	Not Available	1758	Open in IMG/M
3300033290\|Ga0318519_10701871	Not Available	619	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.32%
Host-Associated	Host-Associated	1.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.44%
Aquatic	Environmental → Aquatic	5.88%
Plants	Host-Associated → Plants	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.15%
Peat	Environmental → Terrestrial → Peat	9.24%
Freshwater	Environmental → Aquatic → Freshwater	5.88%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	4.20%
Roots	Host-Associated → Plants → Roots	1.68%
Cave	Environmental → Terrestrial → Cave	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.90%
Loam	Environmental → Terrestrial → Soil → Loam	21.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.88%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.88%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.84%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.08%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.56%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.20%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	4.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.68%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.68%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.68%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.84%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100466902	3300003505	Forest Soil	VSPGVPPGESASTMTAAEREARWTLSARFAIGAASEAEARSILGRALSSLDRELPLQGEPTIAPLRLRXGIWVATLIPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEAK*
JGIcombinedJ51221_101974671	3300003505	Forest Soil	VSPGVPPGESAGTMTPAGREARWSPSVRFAIEAASEAEARAILGQALASLDRELPLQGEPTIAPLRIRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTAEDDVLLHPAVQAVMILCEQSKA*
Ga0062385_100719192	3300004080	Bog Forest Soil	MTPAEREARWALLVRFAIEAASDAETRAVLGQALASLDRELPLEGEPAIAPLRLRDGIWVATLKPDLTVLASVEPDEARNRCRYVSSHFPIGVTWMSRDTGHGERWDWPPDIWSRTPQDDVLLHPTVRAVMIWCEAR*
Ga0062384_1000330822	3300004082	Bog Forest Soil	VSPSVPPGESAATMTPAEREARWALLVRFAIEAASDAETRAVLGQALASLDRELPLEGEPAIAPLRLRDGIWVATLKPDLTVLASVEPDEARNRCRYVSSHFPIGVTWMSRDTGHGERWDWPPDIWSRTPQDDVLLHPTVRAVMIWCEAR*
Ga0062389_1036848791	3300004092	Bog Forest Soil	TMTPAEREARWALLVRFAIEAASDAETRAVLGQALASLDRELPLEGEPAIAPLRLRDGIWVATLKPDLTVLASVEPDEARNRCRYVSSHFPIGVTWMSRDTGHGERWDWPPDIWSRTPQDDVLLHPTVRAVMIWCEAR*
Ga0062386_1004040512	3300004152	Bog Forest Soil	VSPGLPPGESAGTMTPAGREARWSLSVRFAIEAASEAEARATLGQALASLDRELPLRSEPTIAPLRIRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTPEDDVLLHPAVQAVMILCEQSKA*
Ga0070714_1012204652	3300005435	Agricultural Soil	VNPAVPPGESAGIMTPAEREARWALLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPTIAPLRIRAGIWVATLMPDLTVLASVRPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMI
Ga0070713_1004873681	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VNPAVPPGGSAGIMTPAEREARWALSVRFAIEAASEAEAHAILSQALGCLDRELPLQGEPTITPLRLRDDIWVATLMPDLTALASVEPDDATNRCRYVSSHFGVGVGWMSRDTEHVARWDWPPDIWSRSPEDDILLHPAVQAVMILCEAK*
Ga0070713_1009624651	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSPGIPPGQSAGTTTPAEREARWALLVRFAIEAASEAEAHAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPD
Ga0070708_1001668182	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSPGIPPGQSAGTTTPAEREARWGLLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEANRA*
Ga0070706_1001969061	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTPAEREARWALLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEANRA*
Ga0070707_1000401266	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSPGIPPGQSAGTTTPAEQEARWGLLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEANRA*
Ga0070698_1000614494	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSPRIPPGQSAGTMTPAEREARWALLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPTIAPLRIRAGIWVATLMPDLTVLASVRPDDAPNRCRYVSSHFGVDVTWMSRDTKQGARWDWPPDIWSRTLQDDVLLHPAIQAVMIWCEASMV*
Ga0070699_10000520813	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSPGIPPGQSAGTTTPAEREARWALLVRFAIEAASEAEAHAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVPASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEASMA*
Ga0070697_1000178106	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSPGIPPGQSAGTTTPAEREARWGLLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEASRA*
Ga0070764_108044401	3300005712	Soil	MTPAEREARWALLVRLAIEAAGEAEARAILDRALASLERELPLAGEPTITPLRIRDGIWVATLAPDLTVLASVEPDDARNRCRYVSSHFGVGVTWTSRGTQHGERWDWPPDIWSRSHQDDALLHPAVQAVMITCEDRGAH*
Ga0070766_105808161	3300005921	Soil	MTAAEREARWALSVRFAIEAASAAEARAILGQALARLDRELPSQGEPTITPLQRRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTAEDDVLLHPAVQAVMILCEQSKARPLA*
Ga0070765_1003032321	3300006176	Soil	VSPGVPPGESASTMTAAEREARWALSVRFAIGAASEAEARSILGRALSSLDRELPLQGEPTIAPLRLRGGIWVATLIPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEAK*
Ga0070765_1004871332	3300006176	Soil	MSPGMPPGESAGTMSPAEREARWALSVRFAIEAADQAEARAILGQALVRFDRELPLQGEPTIAPLRRRNGIWVATLIPDLTVLASVEPDDARNRCRYVSSHFGVGPSWMSRDTERAARWDWPPDIWSRSPEDDVLLHPAVQAVVILCEQSLA*
Ga0116216_101285092	3300009698	Peatlands Soil	MTPAGREARWSLSVRFAIEAAGEAEARAILGQALASLDRELPLRGEPTIAPLRIRDGIWVATLMPDLTVLASAEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTPEDDVLLHRSRP*
Ga0116216_101797012	3300009698	Peatlands Soil	MTPAEREARWALSVRFAIEASSEAEARAILSQALTCLDRDLPLQGEPTITPLRLRDRIWVAMLMPDLTVLASVEPDDATNRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEAK*
Ga0116223_107733851	3300009839	Peatlands Soil	MTPAEREARWALSVRFAIEASSEAEARAILSQALTRLDRELPLQGEPPITPLRLRDRIWVATLMPDLTVLASVEPDDATNRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEAK*
Ga0074045_107247191	3300010341	Bog Forest Soil	MTPAGREARWSLSVRFAIEAASEAEARATLGQALASLDRELPLRSEPTIAPLRIRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTPEDDVLLHPAVQAVMILCEQSKA*
Ga0074044_100335293	3300010343	Bog Forest Soil	MTPAEREARWALTVRFAIGAASEAEARAILGQALASLDRELPLHGEPTIAPLRLRDGIWVAALMPDLTVLMSVEPDDARNRCRYVSSHFGVGVPWMSRETKDGERWDWPPDIWSRSPQDDVLLHPAVQAVMIWCEAK*
Ga0136449_1002477082	3300010379	Peatlands Soil	MTPAEREARWALSVRFAIEASSEAEARAILSQALTRLDRDLPLQGEPTITPLRLRDRIWVAMLMPDLTVLASVEPDDATNRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEAK*
Ga0136449_1006141621	3300010379	Peatlands Soil	VLSVRFAIETASEAQARAILSQALASLDRELPLQGEPAIAPLRLRDGIWVATLKPDLTMLSSVEPDDARNRCRYVSSHFPVGVTWMSRDTKHGERWDWPPDIWSRTSQDDVLLHPAVQAVMIWCEAGKCSPVA*
Ga0126350_105469392	3300010880	Boreal Forest Soil	MTPAEREAAWALSVRFAIEAASGAEARAIIGQALTSLDTELPLHGEPTIAPLRSRDGIWVATLIPDLTVLASVEPDDARNRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRQAGPDDVLLHPAVQAVMILCEEAATR*
Ga0150983_154918901	3300011120	Forest Soil	MTAAEREARWTLSARFAIGAASEAEARSILGRALSSLDRELPLQGEPTIAPLRLRGGIWVATLIPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEAK*
Ga0182030_101148794	3300014838	Bog	MTPAEREAGWALSVRFAIKAASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPPDIWSRNPGEDDVLLHPAVQAVMIWCEAK*
Ga0182041_103188251	3300016294	Soil	QAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTAMASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0182040_104573841	3300016387	Soil	MAPSVAPTAPARPTPGYRLRSTATPMEVTVNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEADARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0187879_101002124	3300017946	Peatland	MHHDNKTGAAVNQEDSAGAMTPAEREAHWPLTVRFAIEAASEAEARTITGQVLARLDRELPLQGEPTIAPLRLRDGFWVATLKPDLTVLSSVEPDDAPNRCRYVSSHFGVGVTWISRDSKHGARWDWPPDIWSRQPGQDDVLLHPAVQAVMILCEAK
Ga0187783_100163561	3300017970	Tropical Peatland	PAEREAHWALSVRFAIQAATEAEARAILVQVLASFDRKLPVQGEPTITPLRRRDGIWVATIMPDLTVLESVEPDDARNRCRYVSSHFGVGVGWMSRDTGRAARWDWPSDIWSRSPEDDVLLHPALRAVMILCEAK
Ga0187782_100936412	3300017975	Tropical Peatland	VSPGVPPGDSAATMTPAEREARWALSVRFAIEAASDTGARAILGQALASLDRELPLQAEPAIAPLRHRAGIWVATLKPDLTVLASVEPDDARNRCRYVSSHFPMGVAWMSRATSQGERWDWPPDIWSRTPQDDVLLHPAVRAVMIWCQAR
Ga0187859_101945352	3300018047	Peatland	MHHDNKTGAAVNQEDSAGAMTPAEREAHWPLTVRFAIEAASEAEARTITGQVLARLDRELPLQGEPTIAPLRLRDGFWVATLKPDLTVLSSVEPDDAPNRCRYVSSHFGVGVTWISRDSKHGARWDWPP
Ga0187784_106748201	3300018062	Tropical Peatland	VTAGDSAAALTPAEREERWALSVRFAIEAASEAEARAITGQVLSRLDRELPARDEPTITPLRHRNGIWVATLVPDLAVLSSVEPDDAENRCRYVSSHFPIGVTWTCRATKTGARWDWPPDIWSRSPGNDVLLHPAVRAVM
Ga0187784_111988121	3300018062	Tropical Peatland	VPAGDSAAAMTPAEREERWALSVRFAIEAASEAQARATTGQVLSRLDRELPVRDEPTIAPLRHRNGIWVATLMPDLTVLSSVEPDDAENRCRYVSGHFPIGVIWTSRATKTGTRWDWPPDIWSGSPENDVLLHPAVRAVMIWCEARKS
Ga0187772_103594891	3300018085	Tropical Peatland	VTAGDSAAAMTPAEREERWALSVRFAIEAASEAEARAITGQVLGRLDRELPVQDEPTIAPLRHRNGIWVATLMPDLTVLSSVEPDDAENRCRYVSSHFPIGVTWTSRDTKTGARWDWPPDIWSRSPENDVLLHPAVQAVMIWCEARNT
Ga0187772_113804882	3300018085	Tropical Peatland	RFAIEAASEAEARAITGQVLGRLDRELPVQDEPTIAPLRHRNGIWVATLMPDLTVLSSVEPDDAENRCRYVSSHFPIGVTWTSRDTKTGARWDWPPDIWSRSPENDVLLHPAVQAVMIWCEARNT
Ga0187769_100213321	3300018086	Tropical Peatland	VTAGDSAAAMTPAEREERWALSVRFAIEAVGEAEARAITGQVLGRLDRELPVQGEPTIAPLRHRNGIWVATLMPDLTVLSSVEPDDAENRCRYVSSHFPIGVTWTSRDTKTGARWDWPPDIWSRSPENDVLLHPAVQAVMIWCEARNT
Ga0210407_102847231	3300020579	Soil	MTLAGREARWSLSVRFAIEAASEAEARAILGQALASLDRELPLQGEPTIAPLRIRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTAEDDVLLHPAVQAVMILCEQSKA
Ga0210405_104191522	3300021171	Soil	VSPGIPPGQSAGAMTPAEREARWALLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPTIAALRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRDAQQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEASTA
Ga0210408_100881463	3300021178	Soil	VNPVVPPGESAGIMTPAEREARWALSVRFAIEAASEAEARAILGQALARLDGELPLQGEPTITPLRLRDGIWVATLTPDLTALASVEPDDATNRCRYVSSHFGVGVGWMSRDTERVARWDWPPDIWSRSPGDDILLHPAVQAVMILCEAK
Ga0210408_101609732	3300021178	Soil	MSSGIPPGESAGTMTPVEREARWALSVRFAIEAVGEAEARAILGQALARFDRELPLQGEPTIAPFRRRDGIWVATLIPDLTVLASVEPDDARNRCRYVSSHFGVGVDWMSRDTECAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEQSKA
Ga0210408_102346501	3300021178	Soil	VSPGIPPGQSAGAMTPAEREARWALLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPTIAALRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRDAKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEASTA
Ga0210408_104431412	3300021178	Soil	GREARWSLSVRFAIEAASEAEARAILGQALASLDRELPLQGEPTIAPLRIRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTAEDDVLLHPAVQAVMILCEQSKA
Ga0213882_102993271	3300021362	Exposed Rock	MSPPVPPGESAGTVTSAVREARWALSVRFAIEAASEAEARAVLGRALASLDRELPLRGEPALAPLRLRDGIWVATLTPDLTMLSLVEPDDARNRCRYVSSHFPVGVTWMSRLTTQGERWDWPPDIWSRAPQDDVLLHPAVQAVMIWCEAR
Ga0213881_100016134	3300021374	Exposed Rock	MTPAEREARWALSVRFAIEAASEAEARAILGQVLASFDRELPLQGEPTIAPLRQRDRLWVAVLIPDLTVLASVEPDDARNRCRYVSSHFGVGVGWMSRDTKRAVRWDWPPDIWSRSSEDDVLLHPAVQAVMILCEAK
Ga0213881_100958202	3300021374	Exposed Rock	MTPAEREARWALSVRFAIEAASEADARAILGQVLASSDRELPVHGEPTITPLRRQDGIWVATLMPDLTVLESVEPDDARNRCRYVSSHFGAGAGWMSRDTGRAARWDWPSDFWSRSPEDDVLQHPAVRAVMILCEAK
Ga0213881_101286351	3300021374	Exposed Rock	MTPAEREARWALAVRFAIEAADETEARAILGQALASFGRELPLQGEPTIAPLRRRDGIWVATLIPDLTVLASVEPDDARNRCRYVSSHFGVGVGWMSRDNDRAARWDWPPDIWSRSPEDDVLLHSAVQAVMILCEASKA
Ga0213881_101463972	3300021374	Exposed Rock	VSPGVLPGESASTMTPAKREARWALSVRFAIEAASEAEARAILGQVLASFDRELPVQGEPTITPLGRRDGIWVATLMPDLTVLESVEPDDARNRCRYVSSHFGVGVGWMSRDTDRAARWDWPSDIWSRSPDDDVLLHPAVRAMMILCAAK
Ga0213875_102534881	3300021388	Plant Roots	VSSGVPPGESAGAMTPAEREARWALAVRFAIEAADETEARAILGQALASFGRELPLQGEPTIAPLRRRDGIWVATLIPDLTVLASVEPDDARNRCRYVSSHFGVGVGWMSRDNDRAARWDWPPDIWSRS
Ga0213875_102824401	3300021388	Plant Roots	MTPAEREARWALSVRFAIEAASEAEARAILGQVLASFDRELPLQGEPTIAPLRQRDRLWVAVLIPDLTVLASVEPDDARNRCRYVSSHFGVGVGWMSRDTKRAVRWDWPPDIWSRSSEDDVLLHPAVQAVMILC
Ga0210391_114813921	3300021433	Soil	MTPAEREARWALLVRFAIEAPGEAEARAILDRALASLDRELPLAGEPTIAPLRIRDGIWVATLAPDLTVLASVEPDDARNRCRYVSSHFAVGVTWTSRGTQHGERWDWPPDIWSRSHQDDALLHPAVQAVMITCEDRGAH
Ga0187846_101423822	3300021476	Biofilm	MSQGVPPGEPAGAMTPAGREARWTLSVRFAIGATSLAGARAILGQALASLDEKLPLQGEPTMAQLPNRDGIWVATLVPDLTGLVSIEPDDARTRCRYVAGHFGGGVTWMSRGSQEAARWDWPPDIWSRSPGDDVLLHPAVQAVMILCEARDGRPPGSLRASSGSWVQNAADLPQL
Ga0210402_100776632	3300021478	Soil	VSPGVPPDESAATMTPSEREARWALSVRFAIKAASDAPARAILGQALANLDRELPLQGGPAIAPLRLRDGIWVATLKPDLTVLASVEPDDARNRCRYVSSHFPVGVTWTSRDTGHGERWDWPPDIWSRAPQDDVLLHPAVQAVMIWCEAR
Ga0210402_114338121	3300021478	Soil	MTLAGREARWSLSVRFAIEAASEAEARAILGQALASLDRELPLQGEPTIAPLRIRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTAEDDVLLHPAVQA
Ga0210410_107275681	3300021479	Soil	MTLAGREARWSLSVRFAIEAASEAEARAILGQALARFDRELPLQGEPTIAPFRRRDGIWVATLIPDLTVLASVEPDDARNRCRYVSSHFGVGVDWMSRDTECAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEQSKA
Ga0210409_102724841	3300021559	Soil	VSPGVPPGESAGTMTLAGREARWSLSVRFAIEAASEAEARAILGQALASLDRELPLQGEPTIAPLRIRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTAEDDVLLHPAVQAVMILCEQSKA
Ga0207684_100957213	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSPGIPPGQSAGTTTPAEREARWGLLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEASRA
Ga0207646_102124662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSPGIPPGQSAGTTTPAEQEARWGLLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEASRA
Ga0207700_104213981	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSPGIPPGQSAGTTTPAEREARWALLVRFAIEAASEAEAHAILGQALTSLDRELPLQGEPAIAPLRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRGTKQGARWDWPPDIWS
Ga0207700_115343581	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VNPAVPPGGSAGIMTPAEREARWALSVRFAIEAASEAEAHAILSQALGCLDRELPLQGEPTITPLRLRDGIWVAILMPDLTALASVEPDDATNRCRYVSSHFGVGVGWMSRDTEHVARWDWPPDIWSRSPE
Ga0208725_10325972	3300027158	Forest Soil	MTPAEREARWALLVRFAIEAADQAEARAILDRALASLERELPLAGEPTITPLRIRDGIWVATLVPDLTVLASVEPDDARNRCRYISSHFAVGVTWTSRGTQHGERWDWPPDIWSRSHQDDALLHPAVQAVMITCEDRTAH
Ga0209248_100779651	3300027729	Bog Forest Soil	VSPSVPPGESAATMTPAEREARWALLVRFAIEAASDAETRAVLGQALASLDRELPLEGEPAIAPLRLRDGIWVATLKPDLTVLASVEPDEARNRCRYVSSHFPIGVTWMSRDTGHGERWDWPPDIWSRTPQDDVLLHPTVRAVMIWCEAR
Ga0209169_100343802	3300027879	Soil	MTPAEREARWALLVRLAIEAAGEAEARAVLDRTLGSLDRELPLAGEPTIAPLRIRDGIWVATLVPELTVLASVEPDDARNRCRYVSSHFGVGVTWTSRGTQHGERWDWPPDIWSRSHQDDALLHPAVQAVMITCEDRGAH
Ga0209380_108333141	3300027889	Soil	TPAEREARWALSVRFAIEAASAAEARAILGQALARLDRELPSQGEPTITPLQRRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTAEDDVLLHPAVQAVMILCEQSKARPLA
Ga0302220_101201452	3300028742	Palsa	SPGDSAGTMTPAEREAGWALSVRFAIKAASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPPDIWSRNPGEDDVLLHPAVQAVMIWCEAK
Ga0302219_100215461	3300028747	Palsa	VSPGDSAGTMTPAEREAGWALSVRFAIKAASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPPDIWSRNPGEDDVLLHPAVQAVMIWCEAK
Ga0302225_104096502	3300028780	Palsa	VSPGDSAGTMTPAEREAGWALSVRFAIKAASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPPDIWSRNPGEDDVLLHPA
Ga0302232_100067173	3300028789	Palsa	MTPAEREAGWALSVRFAIKAASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPPDIWSRNPGEDDVLLHPAVQAVMIWCEAK
Ga0308309_104125121	3300028906	Soil	MSPGMPPGESAGTMSPAEREARWALSVRFAIEAADQAEARAILGQALVRFDRELPLQGEPTIAPLRRRNGIWVATLIPDLTVLASVEPDDARNRCRYVSSHFGVGPSWMSRDTERAARWDWPPDIWSRSPEDDVLLHPAVQAVVILCEQSLA
Ga0308309_108331811	3300028906	Soil	GRTEVTVSPGVPPGESAGTMTPAGREARWSPSVRFAIEAASEAEARAILGQALASLDRELPLQGEPTIAPLRIRDGIWVATLMPDLTVLASVEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTAEDDVLLHPAVQAVMILCEQSKA
Ga0308309_118893931	3300028906	Soil	VNPAVPPGESAGIMTPAGREARWALSVRFAIEASSEAEARAILSQALARLDRELPLQGEPTITPLRLRDGIWVATLMPDLTALASVEPDDATNRCRYVSSHFGVGVGWMSRDTERVVRWDWPPDIWSRSPEDDILLHPAVQ
Ga0222749_100115215	3300029636	Soil	MTPAEREARWALLVRFAIEAASEAEARAILGQALTSLDRELPLQGEPTIAALRIRDGIWVATLMPDLTVLASVEPDDAPNRCRYVSSHFGVDVTWMSRDAQQGARWDWPPDIWSRTLQDDVLLHPAVQAVMIWCEASTA
Ga0311328_108555181	3300029939	Bog	VSPGDSAGTMTPAEREAGWALSVRFAIKAASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPQDIWSRNPGEDYVLLHPAVQAVMIWCEAK
Ga0311371_1007440610	3300029951	Palsa	VSPGDSAGTMTPAEREAGWALSVRFAIKAASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPPDIWSRNPGEDDVLLHPVVQAVMIWCEAK
Ga0302183_104083841	3300030509	Palsa	AASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPPDIWSRNPGEDDVLLHPAVQAVMIWCEAK
Ga0307482_10985342	3300030730	Hardwood Forest Soil	ARESAGMMTPAEREARWALSVRFAIEAASGVEARAILTQALARLDRELPLQGEPTITPLRLRDGIWVVGLVPDLTALASVEPDDAANRCRYVSSHFGVSVGWMSRNTERVARWDWPSDIWSRSPEDDILLHPAVRAVMILCEAKKGETLA
Ga0302180_101361055	3300031028	Palsa	LTVRFAIEAASEAEARTITGQVLARLDRELPLQGEPTIAPLRLRDGFWVATLKPDLTVLSSVEPDDAPNRCRYVSSHFGVGVTWISRDSKHGARWDWPPDIWSRQPGQDDVLLHPAVQAVMILCEAK
Ga0265760_101625131	3300031090	Soil	MNRAVPPGESAGIMTPAEREARWALSVRFAIEASSEAEARTILSQALTRLDRELPLQGEPTITPLRLRDRIWVATLMPDLTALASVEPDDSTNRCRYVSSHFGMGVTWMSRDTEHAARWDWPPDIWSRS
Ga0302324_1026547253	3300031236	Palsa	QAEARAIVDRALTSLERELPLAGEPTIAPLRIRDGIWVATLVPDLTVLASVEPDDARNRCRYVSSHFGVGVTWTSRHTQDGERWDWPPDIWSRSHADDTLLHPAVQAVMIWCEARGS
Ga0302326_128894631	3300031525	Palsa	LLVRFAIEAADQAEARAIVDRALTSLERELPLAGEPTIAPLRIRDGIWVATLVPDLTVLASVEPDDARNRCRYVSSHFGVGVTWTSRHTQDGERWDWPPDIWSRSHADDTLLHPAVQAVMIWCEARGS
Ga0318516_100133374	3300031543	Soil	VNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318534_100077704	3300031544	Soil	MEVTVNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318541_100119294	3300031545	Soil	VNPAVPPGESAGTMTPAKREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGTWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318538_108164171	3300031546	Soil	VNPEVPPGGSAGTMTPAEREARWTLSVRFAIEAASEAEARDILGRILARLDRELPLQGEPMMTPLRHRDGIWVATLMPDLTAMASVEPDDATNRCRYVTSHFGVGVGWTSRDTEHAARWDWPPDIWSRSPEDEVLLHPAVQAVMILCEQSKA
Ga0318515_100585463	3300031572	Soil	IQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318542_100329482	3300031668	Soil	VNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEADARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0310686_1168033311	3300031708	Soil	MNRAVPPGESAGIMTPAEREARWALSVRFAIEASSEAEARAILSQALTRLDRDLPLQGEPTITPLRLRDRIWVATLMPDLTALESVEPDDSTNRCRYVSSHFGMGVTWMSRDTEHAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEAK
Ga0310686_1183488161	3300031708	Soil	MSPEVPPGESAGTMTPVEREARWALSVRFAIEATSEPEARAILSQALARLDRELPLQGEPTITPLRVRDGIWVATLMPDLTTLASVEPDDAMNRCRYVSSHFGVGVGWISRDTERAERWDWPSDIWSRSPEDDILLHPAVQAVMILCEATRL
Ga0318496_103234101	3300031713	Soil	VNPEVPPGGSAGTMTPAEREARWTLSVRFAIEAASEAEARDILGRILARLDRELPLQGEPMMTPLRHRDGIWVATLMPDLTAMASVEPDDATNRCRYVTSHFGVGVGWTSRDTEHAARWDWPPDIWSRSPEDEVLLHPAVQAVMI
Ga0307474_106784042	3300031718	Hardwood Forest Soil	VNPPVPARESAGMMTPAEREARWALSVRFAIEAASGVEARAILTQALARLDRELPLQGEPTITPLRLRDGIWVVGLVPDLTALASVEPDDAANRCRYVSSHFGVGVGWMSRDTERVARWDWPSDIWSRSPEDDILLHPAVRAVMILCEAKKGETPCLGGRRHG
Ga0318493_102838382	3300031723	Soil	VNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAV
Ga0318501_100076811	3300031736	Soil	MEVTVNPAVPPGESAGTMTPAEREARWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0306918_100106841	3300031744	Soil	VNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIW
Ga0318502_108324611	3300031747	Soil	APARPTPGYRLRSTATRMEVTVNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTAMASVEPDDATNRCRYVTSHFGVGVGWTSRDTEHAARWDWPPDIWSRSPEDEVLLHPAVQAVMILCEQSKA
Ga0318492_100232514	3300031748	Soil	REARWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318494_104016581	3300031751	Soil	VNPAVPPGESAGTMTPADREARWALSVRFAIEAPNEADARDILGRVLARLDRELPLQGEPMITPLRHRDGIWVATILPDLTVLASVEPDDATNRCRYVTSHFGVGVGWMSRDTERAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCKQSEA
Ga0307475_106118842	3300031754	Hardwood Forest Soil	VNPPVPARESAGMMTPAEREARWALSVRFAIEAASGVEARAILTQALARLDRELPLQGEPTITPLRLRDGIWVVGLVPDLTALASVEPDDAANRCRYVSSHFGVGVGWMSRDTERVARWDWPSDIWSRSPEDDILLHPAVRAVMILCEAKKGETPCLGGRRHGCGELGSHRSAWVPGCPLMTVRYPG
Ga0318537_100803542	3300031763	Soil	VNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPKLG
Ga0318554_100875172	3300031765	Soil	MAPSVAPTAPARPTPGYRLRSTATPMEVTVNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318552_100175224	3300031782	Soil	MAPSVAPTAPARPTPGYRLRSTATRMEVTVNPAVPPGESAGTMTPAEREARWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0302319_102246814	3300031788	Bog	VSPGDSAGTMTPAEREAGWALSVRFAIKAASEAEAQAITDQALARLDRALPLEGAPVIAPLRLRNDTWVATLKPDLTVLSGIEPDDAPNRCRYVSSHFGVGVAWISRDTGHGARWDWPPDIWS
Ga0318529_101743772	3300031792	Soil	MAPSVAPTAPARPTPGYRLRSTATPMEVTVNPAVPPGESAGTMTPAKREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318523_100867962	3300031798	Soil	VRLAIQPATAAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0307478_112827921	3300031823	Hardwood Forest Soil	VNPPVPARESAGMMTPAEREARWALSVRFAIEAASGVEARAILTQALARLDRELPLQGEPTITPLRLRDGIWVVGLVPDLTALASVEPDDAANRCRYVSSHFGVGVGWMSRDTERVARWDWPSDIWSRSPEDDILLHPA
Ga0318520_100208791	3300031897	Soil	ASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0306921_101636334	3300031912	Soil	APSVAPTAPARPTPGYRLRSTATPMEVTVNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0310912_100544734	3300031941	Soil	MEVTVNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTAMASVEPDDATYRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0310913_103133913	3300031945	Soil	VNPAVPPGESAGTMTPAKREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318562_100091694	3300032008	Soil	VNPAVPPGESAGTVTPAEREARWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0318569_100624121	3300032010	Soil	VNPAVPPGESAGTMTPAKREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTAMASVEPDDATNRCRYVTSHFGVGVGWTSRDTEHAARWDWPPDI
Ga0310911_101518621	3300032035	Soil	VNPAVPPGESAGTMTPAEREACWALSVRFAIQAASEAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDEVLLHPAVQAVMILCEQSKA
Ga0306924_104841202	3300032076	Soil	VNPEVPPGGSAGTMTPAEREARWTLSVRFAIEAASEAEARDILGRILARLDRELPLQGEPMMTPLRHRDGIWVATLMPDLTAMASVEPDDATNRCRYVTSHFGVGVGWTSRDTEHAARWDWPPDIWSRSPEDEVLLH
Ga0318525_100900803	3300032089	Soil	IQAASAAEARALLSQVLARLDRELPLLGEPTITPLRLRDGIWVATLMPDLTVLASVEPDDATNRCRYVSCHFGVGVGWMSRDTNRVVRWDWPPDIWSRSPEDDILLHPAVQAVMILCEPK
Ga0311301_101448025	3300032160	Peatlands Soil	VSPGVPPGESAGTMTPAGREARWSLSVRFAIEAAGEAEARAILGQALASLDRELPLRGEPTIAPLRIRDGIWVATLMPDLTVLASAEPDDAENRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRTPEDDVLLHRSRP
Ga0311301_105185241	3300032160	Peatlands Soil	MNRAVPPGESAGSMTPAEREARWALSVRFAIEASSEAEARAILSQALTRLDRDLPLQGEPTITPLRLRDRIWVAMLMPDLTVLASVEPDDATNRCRYVSSHFGVGVTWMSRDTEHAARWDWPPDIWSRSPEDDVLLHPAVQAVMILCEAK
Ga0318519_107018711	3300033290	Soil	TLSVRFAIEAASEAEARDILGRILARLDRELPLQGEPMMTPLRHRDGIWVATLMPDLTAMASVEPDDATNRCRYVTSHFGVGVGWTSRDTEHAARWDWPPDIWSRSPEDEVLLHPAVQAVMILCEQSKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075130

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences