Metagenome / Metatranscriptome Family F075118

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075118
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	69 residues
Representative Sequence	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK
Number of Associated Samples	93
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.63 %
% of genes near scaffold ends (potentially truncated)	40.34 %
% of genes from short scaffolds (< 2000 bps)	83.19 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.958 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.092 % of family members)
Environment Ontology (ENVO)	Unclassified (45.378 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.941 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.67% β-sheet: 0.00% Coil/Unstructured: 44.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF08240	ADH_N	52.10
PF01402	RHH_1	23.53
PF03841	SelA	7.56
PF12390	Se-cys_synth_N	2.52
PF01040	UbiA	1.68
PF02142	MGS	1.68
PF02441	Flavoprotein	1.68
PF13426	PAS_9	0.84
PF02321	OEP	0.84
PF14693	Ribosomal_TL5_C	0.84
PF01740	STAS	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	7.56
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.80 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.80 %
Unclassified	root	N/A	4.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.96 %
Unclassified	root	N/A	4.20 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.50 %
Unclassified	root	N/A	4.20 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.84 %
Thermotogae	phylum	All Organisms → cellular organisms → Bacteria → Thermotogae	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.40 %
Unclassified	root	N/A	4.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.68 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.84 %
Thermotogae	phylum	All Organisms → cellular organisms → Bacteria → Thermotogae	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.40 %
Unclassified	root	N/A	4.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.68 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.84 %
Thermotogae	phylum	All Organisms → cellular organisms → Bacteria → Thermotogae	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.40 %
Unclassified	root	N/A	4.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.68 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.84 %
Thermotogae	phylum	All Organisms → cellular organisms → Bacteria → Thermotogae	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.68 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.84 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.84 %
Thermotogae	phylum	All Organisms → cellular organisms → Bacteria → Thermotogae	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.84 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.84 %
Thermotogae	phylum	All Organisms → cellular organisms → Bacteria → Thermotogae	0.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10006284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4555	Open in IMG/M
3300004152\|Ga0062386_100321339	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300004633\|Ga0066395_10278817	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005332\|Ga0066388_100661032	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300005332\|Ga0066388_101527259	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300005764\|Ga0066903_104433200	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300005764\|Ga0066903_107772999	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300006176\|Ga0070765_100759353	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300009792\|Ga0126374_10315788	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300010043\|Ga0126380_10086625	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300010359\|Ga0126376_10005761	All Organisms → cellular organisms → Bacteria	7428	Open in IMG/M
3300010361\|Ga0126378_11750568	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300010361\|Ga0126378_12247565	Not Available	622	Open in IMG/M
3300010376\|Ga0126381_103892323	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300010398\|Ga0126383_10080712	All Organisms → cellular organisms → Bacteria → Acidobacteria	2839	Open in IMG/M
3300010398\|Ga0126383_11327934	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300012971\|Ga0126369_10725454	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300016270\|Ga0182036_11744098	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300016294\|Ga0182041_12338176	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300016319\|Ga0182033_10770003	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300016341\|Ga0182035_11326978	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300016357\|Ga0182032_10371816	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300016357\|Ga0182032_11709484	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300016371\|Ga0182034_10271381	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300016404\|Ga0182037_10912486	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300016422\|Ga0182039_10036635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3213	Open in IMG/M
3300016445\|Ga0182038_10741694	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300017822\|Ga0187802_10004016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4341	Open in IMG/M
3300017822\|Ga0187802_10041706	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300017932\|Ga0187814_10352795	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300017942\|Ga0187808_10146915	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300017942\|Ga0187808_10227450	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300017955\|Ga0187817_10795816	Not Available	604	Open in IMG/M
3300017961\|Ga0187778_11103630	All Organisms → cellular organisms → Bacteria → Thermotogae	553	Open in IMG/M
3300017970\|Ga0187783_10006188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8795	Open in IMG/M
3300017970\|Ga0187783_10905378	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300017972\|Ga0187781_11169413	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300017975\|Ga0187782_10291497	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300017975\|Ga0187782_10488680	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300018006\|Ga0187804_10587446	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300018062\|Ga0187784_10772243	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300018062\|Ga0187784_11121106	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300018085\|Ga0187772_10111947	All Organisms → cellular organisms → Bacteria → Acidobacteria	1770	Open in IMG/M
3300018088\|Ga0187771_10138885	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300020582\|Ga0210395_10059103	All Organisms → cellular organisms → Bacteria → Acidobacteria	2812	Open in IMG/M
3300021401\|Ga0210393_10296102	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300021420\|Ga0210394_10000712	All Organisms → cellular organisms → Bacteria → Acidobacteria	63766	Open in IMG/M
3300021433\|Ga0210391_10203795	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300021474\|Ga0210390_10516444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300021476\|Ga0187846_10338262	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300021560\|Ga0126371_11804551	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300021560\|Ga0126371_11974752	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300026990\|Ga0207824_1021655	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300027502\|Ga0209622_1091245	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300027548\|Ga0209523_1125221	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027703\|Ga0207862_1256293	Not Available	512	Open in IMG/M
3300027812\|Ga0209656_10159872	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300027824\|Ga0209040_10443298	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300027874\|Ga0209465_10000642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16091	Open in IMG/M
3300030730\|Ga0307482_1180248	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300031057\|Ga0170834_108472040	Not Available	642	Open in IMG/M
3300031543\|Ga0318516_10667143	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300031546\|Ga0318538_10057442	All Organisms → cellular organisms → Bacteria → Acidobacteria	1921	Open in IMG/M
3300031546\|Ga0318538_10558342	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300031561\|Ga0318528_10402942	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031564\|Ga0318573_10127000	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300031573\|Ga0310915_10337619	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300031573\|Ga0310915_10386215	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031573\|Ga0310915_10394026	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300031744\|Ga0306918_10017540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4256	Open in IMG/M
3300031744\|Ga0306918_10394223	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300031770\|Ga0318521_10806302	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300031771\|Ga0318546_11076159	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300031780\|Ga0318508_1113068	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031793\|Ga0318548_10662747	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300031794\|Ga0318503_10268877	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031797\|Ga0318550_10622002	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031819\|Ga0318568_10131532	All Organisms → cellular organisms → Bacteria → Acidobacteria	1520	Open in IMG/M
3300031820\|Ga0307473_10649691	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300031833\|Ga0310917_10120745	All Organisms → cellular organisms → Bacteria → Acidobacteria	1706	Open in IMG/M
3300031833\|Ga0310917_10929965	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031833\|Ga0310917_11010046	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300031835\|Ga0318517_10401581	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031846\|Ga0318512_10508201	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300031879\|Ga0306919_10697002	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300031879\|Ga0306919_11512714	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031890\|Ga0306925_10651628	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300031896\|Ga0318551_10726664	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031910\|Ga0306923_10035617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5400	Open in IMG/M
3300031910\|Ga0306923_11606890	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300031912\|Ga0306921_11000578	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300031945\|Ga0310913_10171602	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300031946\|Ga0310910_10799427	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031947\|Ga0310909_10325746	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300031954\|Ga0306926_12366412	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300031954\|Ga0306926_12787767	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031962\|Ga0307479_10045853	All Organisms → cellular organisms → Bacteria	4199	Open in IMG/M
3300031962\|Ga0307479_10483865	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300031962\|Ga0307479_10582159	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300032001\|Ga0306922_10612521	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300032009\|Ga0318563_10347945	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300032035\|Ga0310911_10131457	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300032035\|Ga0310911_10758187	Not Available	561	Open in IMG/M
3300032054\|Ga0318570_10384817	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300032060\|Ga0318505_10134190	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300032060\|Ga0318505_10522618	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300032068\|Ga0318553_10577217	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300032180\|Ga0307471_100060320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3199	Open in IMG/M
3300032261\|Ga0306920_100236441	All Organisms → cellular organisms → Bacteria	2726	Open in IMG/M
3300032770\|Ga0335085_10004669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22519	Open in IMG/M
3300032782\|Ga0335082_10125614	All Organisms → cellular organisms → Bacteria	2513	Open in IMG/M
3300032829\|Ga0335070_10000022	All Organisms → cellular organisms → Bacteria → Acidobacteria	256521	Open in IMG/M
3300032895\|Ga0335074_10470093	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300032898\|Ga0335072_10084018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4124	Open in IMG/M
3300032898\|Ga0335072_10121781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3275	Open in IMG/M
3300032898\|Ga0335072_11746636	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	516	Open in IMG/M
3300033289\|Ga0310914_11283665	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300033402\|Ga0326728_10000029	All Organisms → cellular organisms → Bacteria → Acidobacteria	568686	Open in IMG/M
3300033982\|Ga0371487_0344914	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.60%
Aquatic	Environmental → Aquatic	8.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.08%
Freshwater	Environmental → Aquatic → Freshwater	8.40%
Peat	Environmental → Terrestrial → Peat	1.68%
Cave	Environmental → Terrestrial → Cave	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	10.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.24%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.04%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.84%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100062841	3300001867	Forest Soil	MSWPRDAFEALRQIVLIETRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMAAPSRRLLPETSE
Ga0062386_1003213392	3300004152	Bog Forest Soil	VSWPRDAFAALRQIVLIEHRVNDLTDTVKQLALTCKGLDHRLTRIEAKFELLERMATPARRALPERSEK*
Ga0066395_102788172	3300004633	Tropical Forest Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK*
Ga0066388_1006610322	3300005332	Tropical Forest Soil	VSWPREAFEALRQIVLIDERIKRLTDSVKELATTSKDMDTRLHRLEAKFELLERMASSPRRSLPEKRPK*
Ga0066388_1015272592	3300005332	Tropical Forest Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMATPSRRALPEKSEK*
Ga0066903_1044332002	3300005764	Tropical Forest Soil	VSWPREAFEALRQIVLIETRISTMTDTVKELALTCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK*
Ga0066903_1077729992	3300005764	Tropical Forest Soil	VSWPRDAFQALRQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK*
Ga0070765_1007593532	3300006176	Soil	VSWPREAFDALRQIVRIDHRVHDLTDRVKAIAVTSEELDRRLNRLEAKFELLERMATRTRRALPEKSEK*
Ga0126374_103157881	3300009792	Tropical Forest Soil	VSWPRDAFEAFRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMATPSRRALPEKSEK*
Ga0126380_100866252	3300010043	Tropical Forest Soil	VSWPREAFEALRQIVLIDERIKRLTDSVKELATTSKDMDTRLHRLEAKFELLERMASSPRRSLPEKRQK*
Ga0126376_100057613	3300010359	Tropical Forest Soil	VSWPRESFEALRQIVLIDERISSLTNSVKDLAQTCKDLDSRLIRLEARFELVERVAGRGRRSLLTRTDK*
Ga0126378_117505682	3300010361	Tropical Forest Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK*
Ga0126378_122475652	3300010361	Tropical Forest Soil	VSWPREAFEALRQIVLIDERINNLTTQVKELAQNCKDMDSRLNRLEAKFELLERMATPGRRRELPEHSEK*
Ga0126381_1038923231	3300010376	Tropical Forest Soil	VSWPREAFEALRQIVLIETRISTMTDTVKELALTCQEMDRRLIRLEAKFELLERMA
Ga0126383_100807125	3300010398	Tropical Forest Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMA
Ga0126383_113279343	3300010398	Tropical Forest Soil	VSWPREAFEALRQIVLIETRINTMTDTVKELALTCQEMDRRLIRLEAKFELFERMASPSRRALPEKSEK*
Ga0126369_107254541	3300012971	Tropical Forest Soil	HQRLEESEVSWPRDAFEAFRQIVLIENRINTMTDTVKELAVACQEMERRLVRLEAKFELLERMATPSRRALPEKSEK*
Ga0182036_117440982	3300016270	Soil	LPRPDLERHAEREVSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0182041_123381761	3300016294	Soil	VRRTQRKKVGRNDCLPRPDHQRIEESEVSWPRDAFEAFRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMATPSRRALPEKSEK
Ga0182033_107700032	3300016319	Soil	RSHCLPRPDLERHAEREVSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0182035_113269783	3300016341	Soil	VSWPRDAFQALRQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALP
Ga0182032_103718162	3300016357	Soil	VSWPRDAFEALRQIVLIENRINTMTNTVKELALTCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK
Ga0182032_117094842	3300016357	Soil	VSWPRDAFEALRQIVLIENRINTMTYAVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0182034_102713811	3300016371	Soil	MSPPGAASKTGRNHRLPRADHERHEESKVSWPRDAFEALRQIVLIENRINTMTYAVKELALTCQEMDRRWIRVEAKFELLERMATPSRRA
Ga0182037_109124862	3300016404	Soil	VSRPSDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0182039_100366353	3300016422	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLESKFELLERMASPSRRALPEKSEK
Ga0182038_107416943	3300016445	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQEMDRRLIRLEAKFELLERMATPSRRAL
Ga0187802_100040164	3300017822	Freshwater Sediment	VSWPRDAYQALRQIVLIEDRVNTLTDTVKQLAVTCQDLDRRLTRVEAKFELLEHLATPARRALPQKSEK
Ga0187802_100417063	3300017822	Freshwater Sediment	VSWPRDAFEALRQIVLIEHRMDSLTDTVKDLALTCKDLDRRLVRLEAKFELLERMATPSRRALPEKPEK
Ga0187814_103527952	3300017932	Freshwater Sediment	VNWPRDAFEALRQIVLIEHRMDSLTDTVKDLALTCKDLDRRLVRLEAKFELLERMATPSRRALPEKPEK
Ga0187808_101469152	3300017942	Freshwater Sediment	VSWPRDAYQALRQIVLIEDRVNTLTDTVKQLAVTCQDLDRRLTRVEVKFELLEHLATPARRALPQKSEK
Ga0187808_102274503	3300017942	Freshwater Sediment	VSWPRDAFQALRQIVLIEDRVATLTDSVKQLANTCQELDRRLTRIEAKFELLEHMAAPSRRALPEKSER
Ga0187817_107958161	3300017955	Freshwater Sediment	MSWARDAVEALRHILLIEQRIDTLSEQVKEIAESCKDIDRRLTRIEAKFELLERMAVPSRRALPEHPEK
Ga0187778_111036302	3300017961	Tropical Peatland	VSWPREAFEALRQIVLIDERIHNLTNSVKELAQTCKDLDSRLNRLEAKFELLERMAAPSRRRELPEKSEK
Ga0187783_100061886	3300017970	Tropical Peatland	VSWPRDAFAALRQIVLIDNRINSLSDQVKDLAAACQDLDRRLVRLEAKFELLERMAAPARRALPEKSEK
Ga0187783_109053782	3300017970	Tropical Peatland	NHRIRRGSSEGDEESEVSWPRDAFAALRQIVLIDNRINSLSDQVKELAAACQDLDRRLIRLEAKFELLERMAAPARRALPEKSEK
Ga0187781_111694132	3300017972	Tropical Peatland	VSWPRDAFQALRQIVLIEDRVTTLTESVKQLAQTCQELDRRLTRIEAKFELLEHMAAPSRRALPEHSQK
Ga0187782_102914972	3300017975	Tropical Peatland	VSWPRDAFAALRQIVLIDNRINSLSDQVKELAAACQDLDRRLIRLEAKFELLERMAAPARRALPEKSEK
Ga0187782_104886802	3300017975	Tropical Peatland	SEGLEESKVSWPRDAFQALRQIVLIEDRVATLTDTVKQLANTCQELDRRLTRIEAKFELLEHMAAPSRRALSEKSEK
Ga0187804_105874462	3300018006	Freshwater Sediment	RLENHEEDSVSWPRDAYQALRQIVLIEDRVNTLTDTVKQLAVTCQDLDRRLTRVEAKFELLEHLATPARRALPQKSEK
Ga0187784_107722433	3300018062	Tropical Peatland	VSWPRDAFQALRQIVLIEDRVATLTDTVKQLANTCQELDRRLTRIEAKFELLEHMAAPARRT
Ga0187784_111211062	3300018062	Tropical Peatland	VSWPRDAFQALRQIVLIEDRVTTLTESVKQLAQTCQELDRRLTRIEAKFELLEHMAAPSRRALPENSQK
Ga0187772_101119471	3300018085	Tropical Peatland	VSWPRDAFQALRQIVLIEDRVATLTDTVKQLAQTCQELDRRLTRIEAKFELLEHMAAPSRRALPEQSEK
Ga0187771_101388853	3300018088	Tropical Peatland	VSWPRDAFEALRQIVLIDHRINGLTDRVSQLALACQDLDRRLTRLEAKFELLERMAPPRRRSLPEKSGK
Ga0210395_100591034	3300020582	Soil	VSWPRDVFEALRQIVLIEHRVEDMSDTVKQLALTCQDLDRRLTRMEAKFELLERMATPSRSYRVLPEKSEK
Ga0210393_102961023	3300021401	Soil	VSWPREAFEALRQIVLIDHRVNGFTDRVKEIAVTCQELDRRLNRLEAKFELLERMAIPSRRALPEKSDK
Ga0210394_100007127	3300021420	Soil	VSWPREAFDALRQIVLIDHRVNDLTDRVKTIAVTNEELDRRLNRLEAKFELLERMATRTRRALPEKSEK
Ga0210391_102037952	3300021433	Soil	VSWPRDVFEALRQIVLIEHRVEDMSDTVKQLALTCQDLDRRLTRMEAKFELLERMATPSRSYRALPEKSEK
Ga0210390_105164443	3300021474	Soil	VSWPREALEALRQIVLIDHRVNELTDRVKEIAVTCQELDRRLNRLEAKFELLERMATPSRRALPEKSDK
Ga0187846_103382622	3300021476	Biofilm	VSWPRDAFEALRQIVLIETRINTMTDTVKELALACPEMDRRLIRLEAKFELLERMAAPSRRALPDKSEK
Ga0126371_118045511	3300021560	Tropical Forest Soil	REVSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0126371_119747522	3300021560	Tropical Forest Soil	VSWPRDAFEALRQIVLIENGINTMTDTVKELAVACQEMDRRLIRLEAKFELLERMATPSRRALPEKSEK
Ga0207824_10216551	3300026990	Tropical Forest Soil	VSWPRDAFEALRQIVLIENRINTLTDTVKELALTCQEMDRRLIRLEAKFELLERMAAPSR
Ga0209622_10912451	3300027502	Forest Soil	MSWPRDAFEALRQIVLIETRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMAAPSRRLL
Ga0209523_11252212	3300027548	Forest Soil	MSWPRDAFEALRQIVLIENRINTMTDTVKELADACQGMDRRLVRLEAKFELLERMAVPSRRVLPETSEK
Ga0207862_12562931	3300027703	Tropical Forest Soil	VSWPREAFEALRQIVLIDERIKGLTETVKELAVVSKDMDARLHRLEAKFELLERMATPSRRALPEKSQK
Ga0209656_101598721	3300027812	Bog Forest Soil	VSWPRDAFAALRQIVLIEHRVNDLTDTVKQLALTCKGLDHRLTRIEAKFELLERMATPAR
Ga0209040_104432982	3300027824	Bog Forest Soil	VSWPRDAFAALRQIVLIEHRVNDLTDTVKQLALTCKGLDHRLTRIEAKFELLERMATPARRALPERSEK
Ga0209465_1000064214	3300027874	Tropical Forest Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0307482_11802481	3300030730	Hardwood Forest Soil	MSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQEMDRRLVRVEAKFELLERMAAPSRRVLPGTSEK
Ga0170834_1084720401	3300031057	Forest Soil	VSWPRDAFEALRQIVLIEHRVNGLTDSVKELANTCLELDRRLVRLEAKFELLEHMAGPSRRRLPGKSET
Ga0318516_106671431	3300031543	Soil	VSWPRDAFQALRQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0318538_100574422	3300031546	Soil	VSWPRDAFEAFRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMATPSRRALPEKSEK
Ga0318538_105583423	3300031546	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKS
Ga0318528_104029422	3300031561	Soil	EVSWPRDAFQALRQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0318573_101270001	3300031564	Soil	EVSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0310915_103376192	3300031573	Soil	NDCLPRPDHQRIEESEVSWPRDAFEAFRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMATPSRRALPEKSEK
Ga0310915_103862152	3300031573	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQEMDRRLIRLEAKFELLERMATPSRRALPEKSEK
Ga0310915_103940262	3300031573	Soil	VSWPRDAFEALRQIVLIENRINTMTYAVKELALTCQEMDRRWIRVEAKFELLERMATPSRRALPEKSEK
Ga0306918_100175402	3300031744	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMATPSRRALPEKSEK
Ga0306918_103942233	3300031744	Soil	VSWPREAFEALRQIVLIETRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK
Ga0318521_108063021	3300031770	Soil	VSWPRDAFEALRQILLIENRINTMTGTVKELALSCQEMDRRLIRLEAKFELLERMAAPSRRALP
Ga0318546_110761591	3300031771	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELAVTCQEMDRRLIRLEAKFELLERMATPSRRALPEKSEK
Ga0318508_11130682	3300031780	Soil	VSWPRDAFQALRQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK
Ga0318548_106627472	3300031793	Soil	VSWPRDAFQALRQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMA
Ga0318503_102688772	3300031794	Soil	ARRSHCLPRPDLERHAEREVSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0318550_106220022	3300031797	Soil	PRPHLERHAEREVSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0318568_101315323	3300031819	Soil	RQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0307473_106496912	3300031820	Hardwood Forest Soil	VSWPRDAFEALRQIVLIEHRINGLTETVKKLALTCQDLGRRLVRLEAKFELLERMATPQRRALPEKSEK
Ga0310917_101207451	3300031833	Soil	RKKVGRNDCLPRPDHQRIEESEVSWPRDAFEAFRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMATPSRRALPEKSEK
Ga0310917_109299651	3300031833	Soil	EALRQIVLIENRINTMTDTVKELAVACQEMDRRLIRLEAKFELLERMATPSRRALPEKSE
Ga0310917_110100463	3300031833	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELAVTCQEMDRRLIRLEAKFELLERMATPSRRAL
Ga0318517_104015812	3300031835	Soil	SWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0318512_105082013	3300031846	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSR
Ga0306919_106970023	3300031879	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELAVTCQEMDRRLIRLEAKFELLERMATPSRRALPEKSE
Ga0306919_115127141	3300031879	Soil	PRDAFEALRQILLIENRINTMTGTVKELALSCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK
Ga0306925_106516283	3300031890	Soil	VSWPRDAFEALRQILLIENRINTMTGTVKELALSCQEMDRRLIRLEAKFELLERMAAPSRRDLPEKSEK
Ga0318551_107266641	3300031896	Soil	IVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0306923_100356177	3300031910	Soil	MSPPGAASKTGRNHRLPRADHERHEESKVSWPRDAFEALRQIVLIENRINTMTYAVKELALTCQEMDRRWIRVEAKFELLERMATPSRRALPEKSEK
Ga0306923_116068901	3300031910	Soil	LRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0306921_110005781	3300031912	Soil	DHQRLEESKVSWPRDAFEALRQIVLIENRINTMTDTVKELAVTCQEMDRRLIRLEAKFELLERMATPSRRALPEKSEK
Ga0310913_101716023	3300031945	Soil	VSWPRDAFEAFRQIVLIENRINTMTDTVKELAVACQEMDRRLIRLEAKFELLERMATPSRRALPEKSEK
Ga0310910_107994272	3300031946	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQEMDRRLIRLEAKFELLERMATPSRRALPEKFEK
Ga0310909_103257462	3300031947	Soil	VSWPRDAFEALRQILLIENRINTMTGTVKELALSCQEMDRRLIRLVAKFELLERMAAPSRRALPEKSEK
Ga0306926_123664121	3300031954	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPE
Ga0306926_127877672	3300031954	Soil	ALRQIVLIENRINTMTDTVKELAVACQEMDRRLIRLEAKFELLERMATPSRRALPEKSEK
Ga0307479_100458536	3300031962	Hardwood Forest Soil	VSWPRDAFEALRQIVLIEHRVNSLTDSVKELANTCQEMDRRLVRLEAKFELLEHMGAPSRRSLPGKSEK
Ga0307479_104838652	3300031962	Hardwood Forest Soil	MSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQGMDRRLVRLEAKFELLERMAVPSRRVLPETSEK
Ga0307479_105821592	3300031962	Hardwood Forest Soil	MSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMAAPSRRVLPETSEK
Ga0306922_106125211	3300032001	Soil	FEALRQIVLIENRINTMTDTVKELAVACQEMDRRLIRLEAKFELLERMATPSRRALPEKSEK
Ga0318563_103479452	3300032009	Soil	SWPRDAFQALRQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0310911_101314571	3300032035	Soil	QRQKARRSHCLPRPDLERHAEREVSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0310911_107581871	3300032035	Soil	VSWPRDAFEALRQIVLIENRINTMTYAVKELALTCQEMDRRWIRVEAKFELLERMATPSR
Ga0318570_103848172	3300032054	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK
Ga0318505_101341901	3300032060	Soil	VSWPRDAFQALRQIVLIEDRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEK
Ga0318505_105226182	3300032060	Soil	SWPREAFEALRQIVLIETRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0318553_105772172	3300032068	Soil	LPRPHLERHAEREVSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASPSRRALPEKSEK
Ga0307471_1000603201	3300032180	Hardwood Forest Soil	MSWPRDAFEALRQIVLIENRINTMTDTVKELAVACQEMDRRLVRLEAKFELLERMAAPSRRVLPGTSEK
Ga0306920_1002364414	3300032261	Soil	VSWPRDAFEALRQILLIENRINTMTGTVKELALSCQEMDRRLIRLEAKFELLERMAAPSRRALPEKSEK
Ga0335085_100046696	3300032770	Soil	VSWPRDAFEALRQIVLIEHRINELTEKVAELARACQDLDRRVVRIETKLELFERAALPNRRALPEK
Ga0335082_101256144	3300032782	Soil	VSWPREAFEALRQIVLIDERIKSLTDSVKELATASKEMDARLHRLEGKFELLERMASSPRRSLPEKRQK
Ga0335070_10000022171	3300032829	Soil	VSWPRDAFEALRQIVLIEHRMNELTERVGELARTCQDLDRRMIRIETKIDLFEKAAIHNRRALPEK
Ga0335074_104700932	3300032895	Soil	VSWPRDAFQALRQIVLIEDRVATLTDTVKQLANTCQELDRRLTRIEAKFELLEHMAAPSRRALPEKPEK
Ga0335072_100840183	3300032898	Soil	VSWPRDAFQALRQIVLIEDRVATLTDSVKQLANTCQELDRRLTRIEAKFELLEHMAAPSRRALPEKSEK
Ga0335072_101217814	3300032898	Soil	VSWPRDAFQALRQIVLIEDRVATLTDTVKQLAQTCQELDRRLTRIEAKFELLEHMAAPSRRALPEKSEK
Ga0335072_117466361	3300032898	Soil	MSWPRDAFEALRQIVLIEHRVNGLTDSVKQLATTCQDLDRRLARVEAKFELLERMAAPSRRALPEKSEK
Ga0310914_112836653	3300033289	Soil	VSWPRDAFEALRQIVLIENRINTMTDTVKELALTCQEMDRRLIRLEAKFELLERMASP
Ga0326728_10000029166	3300033402	Peat Soil	VSWPRDAFEALRQIVLIEHRINGLTDTVKQLALTCQDLDRRLVRLEAKFDLLESMATARRRTLPEKSEK
Ga0371487_0344914_422_655	3300033982	Peat Soil	SEEHEETPVSWPRDAFEALRQIVLIEHRINGLTDTVKQLALTCQDLDRRLVRLEAKFDLLESMATARRRTLPEKSEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075118

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences