Metagenome / Metatranscriptome Family F075095

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075095
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	62 residues
Representative Sequence	MTIDLKPEQQRVIDLAVQSGAYQNPGEVLDQAFEIIREQLDLEDWMFEQREAIAAHIEK
Number of Associated Samples	98
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.55 %
% of genes near scaffold ends (potentially truncated)	86.55 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.067 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (16.807 % of family members)
Environment Ontology (ENVO)	Unclassified (32.773 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (36.134 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.87% β-sheet: 0.00% Coil/Unstructured: 47.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13439	Glyco_transf_4	3.36
PF01894	UPF0047	3.36
PF05016	ParE_toxin	3.36
PF02502	LacAB_rpiB	2.52
PF13489	Methyltransf_23	2.52
PF07704	PSK_trans_fac	2.52
PF01521	Fe-S_biosyn	2.52
PF10056	DUF2293	1.68
PF04055	Radical_SAM	1.68
PF02737	3HCDH_N	1.68
PF03693	ParD_antitoxin	1.68
PF13560	HTH_31	0.84
PF14014	DUF4230	0.84
PF01053	Cys_Met_Meta_PP	0.84
PF08541	ACP_syn_III_C	0.84
PF00037	Fer4	0.84
PF07606	DUF1569	0.84
PF00694	Aconitase_C	0.84
PF13520	AA_permease_2	0.84
PF05345	He_PIG	0.84
PF12704	MacB_PCD	0.84
PF08241	Methyltransf_11	0.84
PF02810	SEC-C	0.84
PF00202	Aminotran_3	0.84
PF04014	MazE_antitoxin	0.84
PF03683	UPF0175	0.84
PF07693	KAP_NTPase	0.84
PF07519	Tannase	0.84
PF04452	Methyltrans_RNA	0.84
PF02604	PhdYeFM_antitox	0.84
PF02511	Thy1	0.84
PF03462	PCRF	0.84
PF05509	TraY	0.84
PF01523	PmbA_TldD	0.84
PF00583	Acetyltransf_1	0.84
PF10646	Germane	0.84
PF00578	AhpC-TSA	0.84
PF08338	DUF1731	0.84
PF05015	HigB-like_toxin	0.84
PF01402	RHH_1	0.84
PF01408	GFO_IDH_MocA	0.84
PF00215	OMPdecase	0.84
PF07995	GSDH	0.84
PF12543	DUF3738	0.84
PF01011	PQQ	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	3.36
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	2.52
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	2.52
COG4423	Uncharacterized conserved protein	Function unknown [S]	2.52
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	2.52
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.68
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.68
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.68
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	1.68
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	1.68
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	1.68
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	1.68
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.68
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.84
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.84
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.84
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.84
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.84
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.84
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.84
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.84
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.84
COG4928	Predicted P-loop ATPase, KAP-like	General function prediction only [R]	0.84
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.84
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.84
COG1385	16S rRNA U1498 N3-methylase RsmE	Translation, ribosomal structure and biogenesis [J]	0.84
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.84
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.84
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.84
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.84
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.84
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.84
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.84
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.84
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.91 %
Unclassified	root	N/A	31.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.91 %
Unclassified	root	N/A	31.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.07 %
Unclassified	root	N/A	31.09 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.84 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.52 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.84 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.84 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.84 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	9.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.84 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.84 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.84 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.84 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	3.36 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.68 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.84 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %
Calotrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae	0.84 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.84 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.84 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	0.84 %
Rivulariaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae	0.84 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.84 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.84 %
Rivularia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae → Rivularia	0.84 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.84 %
Calothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix	0.84 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.84 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.84 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %
unclassified Rivularia (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae → Rivularia → unclassified Rivularia (in: Bacteria)	0.84 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.84 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.84 %
Calothrix parietina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → Calothrix parietina	0.84 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.84 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.84 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.09 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	3.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.52 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %
Rivularia sp. PCC 7116	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae → Rivularia → unclassified Rivularia (in: Bacteria) → Rivularia sp. PCC 7116	0.84 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.84 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.84 %
Calothrix parietina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → Calothrix parietina	0.84 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	0.84 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.84 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.84 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10109278	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300004091\|Ga0062387_100148625	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300004091\|Ga0062387_100309177	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300004092\|Ga0062389_101315789	Not Available	908	Open in IMG/M
3300004152\|Ga0062386_101206953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Rivulariaceae → Rivularia → unclassified Rivularia (in: Bacteria) → Rivularia sp. PCC 7116	629	Open in IMG/M
3300004152\|Ga0062386_101329358	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005167\|Ga0066672_10022253	All Organisms → cellular organisms → Bacteria	3340	Open in IMG/M
3300005167\|Ga0066672_10150526	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300005466\|Ga0070685_11323833	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005591\|Ga0070761_10297652	Not Available	971	Open in IMG/M
3300006052\|Ga0075029_100787402	Not Available	646	Open in IMG/M
3300006162\|Ga0075030_100743456	Not Available	776	Open in IMG/M
3300006176\|Ga0070765_101988468	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300006237\|Ga0097621_101861777	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006893\|Ga0073928_10093257	Not Available	2544	Open in IMG/M
3300006893\|Ga0073928_10995645	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009175\|Ga0073936_10114420	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300009549\|Ga0116137_1209138	Not Available	519	Open in IMG/M
3300009615\|Ga0116103_1107273	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009615\|Ga0116103_1168653	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300009616\|Ga0116111_1147937	Not Available	559	Open in IMG/M
3300009630\|Ga0116114_1144497	Not Available	610	Open in IMG/M
3300009640\|Ga0116126_1174422	Not Available	706	Open in IMG/M
3300009762\|Ga0116130_1090808	Not Available	958	Open in IMG/M
3300010339\|Ga0074046_10411765	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300010339\|Ga0074046_10559470	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300010343\|Ga0074044_10346757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	974	Open in IMG/M
3300010379\|Ga0136449_103613899	Not Available	586	Open in IMG/M
3300010379\|Ga0136449_103909984	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300010860\|Ga0126351_1204776	Not Available	537	Open in IMG/M
3300012203\|Ga0137399_11101300	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300012363\|Ga0137390_10913651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	832	Open in IMG/M
3300012363\|Ga0137390_11327451	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300012923\|Ga0137359_10997366	Not Available	719	Open in IMG/M
3300014155\|Ga0181524_10333968	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300014155\|Ga0181524_10467245	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300014158\|Ga0181521_10410480	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300014169\|Ga0181531_10934974	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300014199\|Ga0181535_10714621	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300014201\|Ga0181537_11160037	Not Available	522	Open in IMG/M
3300014492\|Ga0182013_10233911	All Organisms → cellular organisms → Bacteria → Acidobacteria	1076	Open in IMG/M
3300014495\|Ga0182015_10023869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4899	Open in IMG/M
3300014502\|Ga0182021_10378327	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300014657\|Ga0181522_10556795	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300014839\|Ga0182027_11392200	Not Available	695	Open in IMG/M
3300014969\|Ga0157376_12633187	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300016371\|Ga0182034_10388352	Not Available	1142	Open in IMG/M
3300017935\|Ga0187848_10130478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1120	Open in IMG/M
3300017935\|Ga0187848_10441808	Not Available	534	Open in IMG/M
3300017940\|Ga0187853_10495452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300017941\|Ga0187850_10109204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1333	Open in IMG/M
3300017946\|Ga0187879_10761682	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300017948\|Ga0187847_10827482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300017995\|Ga0187816_10399746	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300017996\|Ga0187891_1097753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1114	Open in IMG/M
3300017996\|Ga0187891_1293217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300018005\|Ga0187878_1052478	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300018008\|Ga0187888_1341109	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300018017\|Ga0187872_10198485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	927	Open in IMG/M
3300018025\|Ga0187885_10381289	Not Available	633	Open in IMG/M
3300018030\|Ga0187869_10421826	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300018035\|Ga0187875_10413447	Not Available	720	Open in IMG/M
3300018035\|Ga0187875_10742778	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300018040\|Ga0187862_10041586	Not Available	3392	Open in IMG/M
3300018042\|Ga0187871_10196766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1127	Open in IMG/M
3300018046\|Ga0187851_10250222	Not Available	1039	Open in IMG/M
3300018057\|Ga0187858_10530735	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300018090\|Ga0187770_11599159	Not Available	532	Open in IMG/M
3300018482\|Ga0066669_10971801	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300019082\|Ga0187852_1380274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300019786\|Ga0182025_1237771	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300019787\|Ga0182031_1129809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300020581\|Ga0210399_11285912	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300021420\|Ga0210394_10018958	All Organisms → cellular organisms → Bacteria → Acidobacteria	6426	Open in IMG/M
3300021432\|Ga0210384_11677951	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300021476\|Ga0187846_10155930	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300021559\|Ga0210409_10379958	Not Available	1266	Open in IMG/M
3300022506\|Ga0242648_1053286	Not Available	621	Open in IMG/M
3300022555\|Ga0212088_10067749	All Organisms → cellular organisms → Bacteria	3584	Open in IMG/M
3300022555\|Ga0212088_10708422	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300025439\|Ga0208323_1031289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1055	Open in IMG/M
3300025961\|Ga0207712_10396121	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300026291\|Ga0209890_10169086	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300026319\|Ga0209647_1334376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → Calothrix parietina	512	Open in IMG/M
3300026557\|Ga0179587_10640119	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300027745\|Ga0209908_10188951	Not Available	559	Open in IMG/M
3300027825\|Ga0209039_10006227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7956	Open in IMG/M
3300027857\|Ga0209166_10522856	Not Available	608	Open in IMG/M
3300027911\|Ga0209698_10460926	Not Available	987	Open in IMG/M
3300028090\|Ga0255349_1017054	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300028746\|Ga0302233_10031790	Not Available	2243	Open in IMG/M
3300029915\|Ga0311358_10677007	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300029922\|Ga0311363_10343339	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300029943\|Ga0311340_10916714	Not Available	727	Open in IMG/M
3300029944\|Ga0311352_10563582	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300029951\|Ga0311371_11967756	Not Available	622	Open in IMG/M
3300030007\|Ga0311338_10453145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1360	Open in IMG/M
3300030020\|Ga0311344_10827122	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300030056\|Ga0302181_10374546	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	618	Open in IMG/M
3300030520\|Ga0311372_11644041	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300030520\|Ga0311372_12839214	Not Available	530	Open in IMG/M
3300030967\|Ga0075399_11317767	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031022\|Ga0138301_1255001	Not Available	542	Open in IMG/M
3300031028\|Ga0302180_10301355	Not Available	826	Open in IMG/M
3300031234\|Ga0302325_12154721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	680	Open in IMG/M
3300031234\|Ga0302325_13323463	Not Available	510	Open in IMG/M
3300031236\|Ga0302324_100575353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1622	Open in IMG/M
3300031236\|Ga0302324_101124781	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300031236\|Ga0302324_101280871	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300031236\|Ga0302324_103245162	Not Available	534	Open in IMG/M
3300031236\|Ga0302324_103535947	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031525\|Ga0302326_12897995	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031718\|Ga0307474_10729121	Not Available	783	Open in IMG/M
3300031788\|Ga0302319_10223256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2336	Open in IMG/M
3300032160\|Ga0311301_10096907	All Organisms → cellular organisms → Bacteria	5817	Open in IMG/M
3300032160\|Ga0311301_12202853	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	632	Open in IMG/M
3300032160\|Ga0311301_12235352	Not Available	626	Open in IMG/M
3300033402\|Ga0326728_10014681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16545	Open in IMG/M
3300033755\|Ga0371489_0353914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	689	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.48%
Host-Associated	Host-Associated	2.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.62%
Aquatic	Environmental → Aquatic	42.86%
Plants	Host-Associated → Plants	2.52%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	38.66%
Soil	Environmental → Terrestrial → Soil	33.61%
Peat	Environmental → Terrestrial → Peat	20.17%
Sediment	Environmental → Aquatic → Sediment	2.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.68%
Cave	Environmental → Terrestrial → Cave	0.84%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	36.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.01%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.08%
Lake	Environmental → Aquatic → Freshwater → Lake	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.52%
Loam	Environmental → Terrestrial → Soil → Loam	2.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	28.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.84%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.20%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	2.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.52%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.52%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.52%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.68%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.84%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.84%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.84%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.84%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009615	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_101092782	3300003218	Bog Forest Soil	MTIDLKPEQQRVIDLAVRSGAYQNAGEVLDQAFEIIREHLDLEDWMLEQRKEVAAHIATGFAGCPTHSRFSNEWE*
Ga0062387_1001486252	3300004091	Bog Forest Soil	MTIDLKPEQQRMIDLAVRSGAYQNAGEVLDQAFEIIREQLNLEDWMLREREEVAAH
Ga0062387_1003091773	3300004091	Bog Forest Soil	MTIDLKPEQQRVIDLAIRSGAYRDPGEVLDQAFEIIREQFDLEDWMLMQRDEIAK
Ga0062389_1013157892	3300004092	Bog Forest Soil	MTIDLKPEQQRLIDLAVQSGAYQSANEVLDQAFAIIREQLDLEDWMLEQREAVAAHIAVGFAQAERGDLIDGECGR*
Ga0062386_1012069531	3300004152	Bog Forest Soil	MTIELKPEHQQTIDLAIRSGVYHDSGEVLDQAFEIIRAQLHGEDWLGEQREAVAAHIASGFAQAERGELMDGEA
Ga0062386_1013293581	3300004152	Bog Forest Soil	MTIDLKPEQQRVIDLAVRSGAYQNAGEVLDQAFEIIREQLSLEDWMLNQREEVAAHIATGYAQAERGE
Ga0066672_100222531	3300005167	Soil	VTFDLKPEQQRVIDLAVGSGAYQNPGEILDQAFEIIREQLDLEDWMLEQKESIAAHIEQGFAQAECGELMDG
Ga0066672_101505261	3300005167	Soil	MEDDNTRAEGDTPPMTIDLNPEQQRVIDLAVGSGAYKNPSEVLDQALAIIREQLDLEDWMLEEKESIAAHIERGFLQAERG
Ga0070685_113238332	3300005466	Switchgrass Rhizosphere	VTVELKPEHQRMIDMAVQSGVYRDPTEALDQAFEIIREQLHHEDWLAEQRERVAAKIATGFAQ
Ga0070761_102976521	3300005591	Soil	MTIDLKPEQQRAIDLAIRSGAYNDPSEVLDQAFAIIRDQFDFEDWMLEDRDAVAAHIRTGFAQAER
Ga0075029_1007874021	3300006052	Watersheds	MSIDLKPEQQRVIDLAVQSGAYGNPGEVLDQAFEIIREPLELEDWMLGQREAIAAHIATGFAQAERGELT
Ga0075030_1007434562	3300006162	Watersheds	MIIDLKPDQQGVIDLAVGSGAFQNPSGVLDPRLEIIREQLDHESWMMEQRDAIAAHY*
Ga0070765_1019884682	3300006176	Soil	VSIDLKPEQQRVIDLAVRSGAYRNPGEVLDQAFEIIREQLDLEDWMFEQREAIAAHIETGFAQ
Ga0097621_1018617773	3300006237	Miscanthus Rhizosphere	MAIELKPEQQRVIDLAVGSGAYQSPDEVIDQAFEIIREQLGLEDWMLEQREAVAAHIAKGFAQ
Ga0073928_100932572	3300006893	Iron-Sulfur Acid Spring	MTIELKPEQQRVIDLAMQSGAYHDPGDVLEQALEIIREQLDHEVWLAEECEAVAAKIAEGFAQAERGE
Ga0073928_109956452	3300006893	Iron-Sulfur Acid Spring	MTIDLKPEQQRVIDLAVRSGAYQNPGEVLDQAFEIIREQLDLEDWMFEQREAIAA
Ga0073936_101144202	3300009175	Freshwater Lake Hypolimnion	VIDLKPEQQRVIDLAVGSGAYQNPSEVLDQAFEIIREQLALEDWMFERREEIASHIEKALLRPSAEN*
Ga0116137_12091382	3300009549	Peatland	MTIELKPEHQQTIDLAIRSGIYHDSGEVLDQAFEIIRAQLHSEDWLTEQRE
Ga0116103_11072732	3300009615	Peatland	MTIELKPEHQQMIELAIRSGIYHDSGEVLDQAFEIICAQLHSEDWLTEQREAVAA
Ga0116103_11686532	3300009615	Peatland	MTIELKPEHQQTIDLAVRSGVYHDSGEVLDQAFEIIRAQLHSEDWLTEQREAVAAHI
Ga0116111_11479371	3300009616	Peatland	MTIELKPEHQQTIDLAIRSGVYHDSGEVLDQAFEIIRAQLHSEDWLAEQR
Ga0116114_11444972	3300009630	Peatland	MTIELKPEHQQMIDLAIQSGVYHDSGEVLDQAFEIIRAQLHSEDWLAEQREAVAAHIATGFAQAERG
Ga0116126_11744221	3300009640	Peatland	MTIELKPEHQQTIDLAIQSGVYHDSGEVLDQAFEIIRAQLHSEDWLAEQREAVAAHIATGFA
Ga0116130_10908083	3300009762	Peatland	MTIELKPEHQQMIDLAIRSGVYHDSGEVLDQAFEIIRAQLHSEDWLAQQREAV
Ga0074046_104117652	3300010339	Bog Forest Soil	MTLNLKPEQQRVIDLAVQSGAYQNPGEVLDQAFEIIREQLDLEDWMLGQRKEIAAHIAAGFAQ
Ga0074046_105594702	3300010339	Bog Forest Soil	MTIDLKPEQQRVIDLAVQSGAYQNAAEVLDQAFEIIREQLNLEDWMLSQREEVAAHIATGFA
Ga0074044_103467571	3300010343	Bog Forest Soil	MVIDLKPEQQRLIDLAVQSGAYRDPAEVVDQAFEIIREQLDLGDWMLEEREAVAAHV
Ga0136449_1036138992	3300010379	Peatlands Soil	VTIELKPEQQRVIDLAVRSGAYQDASDVLDQAFEIIREQLHPEGWMLEKSEAVA
Ga0136449_1039099841	3300010379	Peatlands Soil	MTIDLKPEQQRVIDLAVRSGAYQDSAEALNQAIEIIREQLDLGDWMVEQRDAVAAHIEIGFA
Ga0126351_12047761	3300010860	Boreal Forest Soil	MTIELKPEQQRVIDLAVRSGAYQNPGEVLDQAFEIIREQLELEDWMLQQREEVSAHIARALPKPNVVS*
Ga0137399_111013001	3300012203	Vadose Zone Soil	MTIDLKPEQQRVIDLAVQSGAYQNPGEVLDQAFEIIREQLDLEDWMFEQREAIAAHIEK
Ga0137390_109136511	3300012363	Vadose Zone Soil	MTIELNPEQQRTIDLAIRSGAYHDPSEVLDQAFEIIREQLHREDWLTEQREAVAAKIATGYAQ
Ga0137390_113274512	3300012363	Vadose Zone Soil	MAINQKPEQQRIIDLAVGSGACQNPGEVLDQAYEIIREQLDLEDWMLEQREVVAAHIEKGFAQAE
Ga0137359_109973662	3300012923	Vadose Zone Soil	AIDLKPEQQRVIDLAVQSGAYQNPGEVRDQAFEIIREQLQLEDWMVEQRKAVAAHIETGFAEAERGELIEMEPESEELM*
Ga0181524_103339681	3300014155	Bog	MTIDLKPEQQRAIDLAVRSGAYQNPGEVLDQAFAIVREQLDLEDWMLEQRESIAAHIEKG
Ga0181524_104672452	3300014155	Bog	MTIDLRPEQQRVIDLAVRSGAYRNPSEVLDQALEIIREQLDLEDWMLEQREAIAAHIGRGFAQAER
Ga0181521_104104802	3300014158	Bog	MTIELKPEQQQMIDLAIRTGVFNDSSEVIDQALEIIRAQLQSEGWLAEQRERVAAQIAT
Ga0181531_109349741	3300014169	Bog	VTIDLKPEQQRVIDMAVQSGAYQNPGEVLDRAFEIIREQIDLEDWMFEQRESVAAHIEKGFAPAERGE
Ga0181535_107146211	3300014199	Bog	MTIELRPEQQRVIDLAVQSGAYQNAGEVLDQAIEIIREQLQAEDWMLEHRAATAAH
Ga0181537_111600372	3300014201	Bog	MIIDLKPEQQRVIDLAVQSGAYRNSAEVLDQAFEIIREQLDLEDWKLGQRDEISAHIATGFAQTSMAN*
Ga0182013_102339112	3300014492	Bog	MTLNLKPEQQRVIDLAVQSGAYQNPGEVLDQAFEIIREQLDLEDWMLGQRKEIA
Ga0182015_100238695	3300014495	Palsa	VTIDLKPEQQRVIDLAVRTGAYRNPSDVLDQAFAIIREQLDLENWMLEEREAVA
Ga0182021_103783271	3300014502	Fen	LKPEHQQVIDLAIRSGVYHDSGEVLDQALEIIRAQIHSEGWLAEQRERVAAQIATGFAQA
Ga0181522_105567952	3300014657	Bog	VTIDLKPEQQRVIDMAVQSGVYENTGEVLDRAFEIIREQLDIEDWMFEERESVAAHIEKGFAPAERGEIGRWRRGG*
Ga0182027_113922002	3300014839	Fen	MTIELKPEHQKVIDLAIQSGVYHDSGEVLDQALEIIRAQLHSENWLTEQRESVAA*
Ga0157376_126331872	3300014969	Miscanthus Rhizosphere	VAIELKPEQQRVIDLAIKSGAYQDPGEVLDQALEIIREQLQLEDWMVEQRDAVAAHIETGFA
Ga0182034_103883522	3300016371	Soil	MTIELKPEHERTIDLAIRSGAYHDPEEVLDQAFEMIREQLQLEEWMADQRGAIASQIATGFAQAERGEL
Ga0187848_101304781	3300017935	Peatland	MTIELKPEHQQMIELAIRSGIYHDSGEVLDQAFEIIRAQLHSEDWLTEQREAVAAHIATGFAQAE
Ga0187848_104418081	3300017935	Peatland	MTIELKPEHQQMIDLAIQSGVYHDSGEVLDQAFEIIRAQLHSEDWLAEQREAVAAHI
Ga0187853_104954522	3300017940	Peatland	MTIDLKPEQQRVIDLAVQSGAYLDPGEVLDQAFEIIREQLDLEDWMLGQREQVAAHIAAGFAQA
Ga0187850_101092041	3300017941	Peatland	MTIELKPEHQQTIDLAVRSGVYHDSGEVLDQAFEIIRAQLHSEDWLAEQR
Ga0187879_107616822	3300017946	Peatland	VTIDLKPEQQRVIDLAVGSGAYQNPDEVLDQAFEIIREQLQLEDWMVEQRAAVVAHIETGFAQ
Ga0187847_108274822	3300017948	Peatland	LKGAPVAIDLRPEQQLVIDLAVRSGAYRKPGEVLDQAFAIIREQLDFEDWMIEEREAVAA
Ga0187816_103997462	3300017995	Freshwater Sediment	MTIDLKPEQQRVIDLAVQSGAYQNPDEVLDQAFEIIREQLHLEDWMLGQREAVAAQIATGFAQAERGE
Ga0187891_10977532	3300017996	Peatland	MTIELKPEHQQMIELAIRSGIYHDSGEVLDQAFEIIRAQLHSEDWLTEQREAVAAHIATGFAQ
Ga0187891_12932171	3300017996	Peatland	MTIELKPEHQQTIDLAIRSGIYHDSGEVLDQAFEIIRAQLHSEDWLTEQREAVAAHIATGFAQAE
Ga0187878_10524783	3300018005	Peatland	MTIELKPEHQQMIDLAIRSGIYHDSGEVLDQAFEIIRAQLHSEDWLTEQREAVAAHIATGFAQAERGELMD
Ga0187888_13411091	3300018008	Peatland	MTIDLKPEQQRVIDLAVQSGAYQNPGEVLDQAFEIIREQLDLEDWMLEQRESIAAHIEKGFAQAE
Ga0187872_101984853	3300018017	Peatland	MTIELKPEHQQMIELAIRSGIYHDSGEVLDQAFEIIRAQLHSEDWLTEQ
Ga0187885_103812891	3300018025	Peatland	MTIELKPEHQQMIDLAIRSGIYQDSGEVLDQAFEIIRAQLHSEDWLTEQRE
Ga0187869_104218262	3300018030	Peatland	MTIDLKPEQQRAIDLAVRSGAYQNPGEVLDQAFEIIREQLALEDWMLEQREAVAAHIEKGFAQ
Ga0187875_104134472	3300018035	Peatland	MTIDLKPEQQRVIDLALRSGAYQSPGEVLDQAFAIIREQLGFEDWMLEQRE
Ga0187875_107427781	3300018035	Peatland	MTIELKPEQQQTIDLAIRSGVYHDSGEVLDQAFEIIRAQLHSEDWLAEQ
Ga0187862_100415861	3300018040	Peatland	MTIELKPEHQQMIDLAIRSGVYHDSGEVLDQAFEIIRAQLHSEDWLTEQREAVA
Ga0187871_101967661	3300018042	Peatland	LAVRSGAYRNPGEVLDQAFAIIREQLDFEDWMIEEREAVAARIKTGFAQAERGELIEGVPRLRCCGNGAPRS
Ga0187851_102502221	3300018046	Peatland	MTIELKPEHQQVIDLAIRSGVFLDTGEVLDQALEIIRAQLHSEAWLKEHRDR
Ga0187858_105307352	3300018057	Peatland	MTIDLKPEQQRVIDMAVRSGAYRSPDEVLDRAFEIIRYRLDQEDWMFEQREAIAVHIGEGFAQAERGELL
Ga0187770_115991591	3300018090	Tropical Peatland	MTIDLRPEQQHVIDLAVRSGAYQNPGDVLDQAFEIIREQLELQDWMIAQRAR
Ga0066669_109718011	3300018482	Grasslands Soil	VAIELKPEQQRVIDLAVQSGAYQDPSEVLDQAFEIIREQLQLEDWIVEQREAIAAHIE
Ga0187852_13802741	3300019082	Peatland	MTIELKPEHQQTIDLAIRSGIYHDSGEVLDQAFEIIRAQLHSEDWLAEQREAVAAHIATGFAQAERGELMDG
Ga0182025_12377715	3300019786	Permafrost	LKKGGTRAIDLKPEQQRVIDLAVGSGAYQNAGEVLDQAFEIIREQLDLEDWMVEQREAVAATH
Ga0182031_11298091	3300019787	Bog	MTIDLKPEQQRVIDLAVQSGAYLDPGEVLDQAFEIIREQLDLEDWMLGQREQVAAHIAAGFAQAERAWRT
Ga0210399_112859121	3300020581	Soil	MTIELKPEHQRMIDQAIQSGAYREPGEVLDQAFEIIREQLRSEDWLVEQREAVAARIAKGFAQAERGELMDG
Ga0210394_100189583	3300021420	Soil	VKRVTVKRVIDLAVQSGAYRDPAEVVDQAFAIIREQLELGDWMLEQREVIASRIEKGFA
Ga0210384_116779511	3300021432	Soil	MTIELKPEHQRMIDQAIQSGAYREPGEVLDQAFEIIREQLRSEDWLVEQREA
Ga0187846_101559302	3300021476	Biofilm	MRKFEKEGESAMTIDLKPEQQRVIDLAVQSGAYRNPDEVLDQALEIIREQLDLEDWMLE
Ga0210409_103799583	3300021559	Soil	MTIELKPEQKHVIDLAVQSGAYRDPGEVLDQAFEIIRDQLHAQDWMVAQRQAVAVHIAT
Ga0242648_10532861	3300022506	Soil	MTIDLKPEQKQVIDLAVQSGSYQNPSEVLDQAFEILREQLDLEDWMFEHSEAVAAHIQKGFDQAQSGELMD
Ga0212088_100677494	3300022555	Freshwater Lake Hypolimnion	MSIDLKPEQQRVIDLAIQSGAYRNPAEVLDQAFEILREQLDLEDWMFEQRDVIAAQIGKGFAQAQRAN
Ga0212088_107084221	3300022555	Freshwater Lake Hypolimnion	VIDLKPEQQRVIDLAVGSGAYQNPSEVLDQAFEIIREQLALEDWMFERREEIASHIEKALLRPSAEN
Ga0208323_10312891	3300025439	Peatland	MTIELKREHQQMIDLAIRSGIYHDSGEVLDQAFEIIRAQLHSEDWLAEQREAVAAQIATGFAQAERGEL
Ga0207712_103961213	3300025961	Switchgrass Rhizosphere	MAIELKPEQQRVIDLAVGSGAYQSPDEVIDQALEIIREQLALGDWMLEQREAI
Ga0209890_101690862	3300026291	Soil	MTIDLKPEQQRVIDLAVRSGAYQNPDEVLDQAFEIIREQLDLEDWMLGQREE
Ga0209647_13343761	3300026319	Grasslands Soil	MTVELKPEQQRTIDLAIQSGAYHDPSEVLDQAFEIIREQLHYEDWLTEQRETVA
Ga0179587_106401191	3300026557	Vadose Zone Soil	MTFDLNPEQQRVLDLAVRSGAYQNPGEVLDRAFEIIREQLDLEDWMLGRREEVTAYIA
Ga0209908_101889511	3300027745	Thawing Permafrost	MTINLRPEQQRVIDLAVQSGAYQSPGEVLDQALEIIREQLELEDWMVEQREAVAAHIEAGLSLIHI
Ga0209039_100062272	3300027825	Bog Forest Soil	MTIDLKPEQQRVIDLAVRSGAYQNAGEVLDQAFEIIREHLDLEDWMLEQRKEVAAHIATGFAGCPTHSRFSNEWE
Ga0209166_105228561	3300027857	Surface Soil	MTIHLKPEQQRVIDLAVQSGAYQNPAEVLDQALEIIREQLDLEDWMLEHRHAIAAHLETGFAQAEGGELIDGDV
Ga0209698_104609261	3300027911	Watersheds	VTIDLKPEQQRVIDLAVRSGAYQNPGEVLDQALEIIREQLQSEDWMIEQRDAVATHI
Ga0255349_10170541	3300028090	Soil	MTIDLKPEQQRVIDLAVQSGAYLDPGEVLDQAFEIIREQLDLEDWMLGQREQVAAHIAAGFA
Ga0302233_100317901	3300028746	Palsa	MTIDLKPEQQRVIELAVRSGAYQNASEVLDQAFEIIREQLDLEDWMLGQREEVAAHIAVGFAQTERGELVEG
Ga0311358_106770071	3300029915	Bog	MTIDLKPEQQRVIDLAVRSGAYQNPGEVLDQAFEIIREQLDLEDWMLEQREEVAAHIAEGFAQAERG
Ga0311363_103433396	3300029922	Fen	MTIDLKPEQQRVIDLAVRSGAYRNPGEVLDQALEIIREQLDLEDWMFEQREAIAAH
Ga0311340_109167144	3300029943	Palsa	MTIDLKPEQQRVIELAVRSGAYRDSGEVLEQAFAIIREQLDFEDWMLEER
Ga0311352_105635821	3300029944	Palsa	MTIDLKPEQQRVIDLAVRSGLYQNPGEVLDQAFEIIREQLDLEDWMFEQREAIAAHIEIGFAQA
Ga0311371_119677562	3300029951	Palsa	MTIDLKPEQQRVIDLAVKSGAYQNPSEVLDQAFEIIREQLDLEDWMLGQREEVAAHIAVGFAQAERGALIDG
Ga0311338_104531451	3300030007	Palsa	MMTIDLKPEQQRVIDLAVRSGAYQNPGEVLDQAFEIIREQLDLEDWMFEQREAIAAHIE
Ga0311344_108271222	3300030020	Bog	MTIDLKPEQQRAIDLAVRSGAYQNPGEVLDQAFAIIREQLDLEDWMLEQRESNAA
Ga0302181_103745461	3300030056	Palsa	MTVDLKPEQQRVIDLAVRSGAYRNSAEVLDQAFAIIREQLDLDDWMLTEREAAASHI
Ga0311372_116440412	3300030520	Palsa	MTIDLKPEQQRVIDFAIRSGACQDPGEVLDQAFAIIRDQFDFEDWMLEDRDAVATHINTGFAQPSEVN
Ga0311372_128392142	3300030520	Palsa	MTIDLKPEQQRVIELAVRSGAYRDSGEVLEQAFAIIREQLDFEDWMLEEREAVAAHIEMGFAQAERG
Ga0075399_113177672	3300030967	Soil	MTIDLKPEQQRVIDQAVRSGAYQNAGEVLDKALEILREQLDLEDWMFEQREAIAAHIEKGFNQAESGELMDGD
Ga0138301_12550011	3300031022	Soil	MTIDLKPEQQRVIDQAVKSGVYQNPGEVLDQALEILREQLDLEDWIFEEREAVASHIEKG
Ga0302180_103013551	3300031028	Palsa	MTIDLKPEQQRVIELAVRSGAYRDSGEVLEQAFAIIREQLDFEDWMLEEREAVAAHIE
Ga0302325_121547211	3300031234	Palsa	MTIELKPEQQRVIDFAIRSGACQDAGEVLDQAFAIIRDQFDFEDWMLEDRDAVATHIQTGFVPAE
Ga0302325_133234631	3300031234	Palsa	MMTIDLKPEQQRVIDLAVRSGAYRNPGEVLDQAFEIIREQLDLEDWMFEQREAIAAHIETGFAQA
Ga0302324_1005753535	3300031236	Palsa	MTIDLKPEQQRVIDFAIRSGACQDPGEVLDQAFAIIRDQFDFEDWMLEDRDAVATHINTGFAQ
Ga0302324_1011247814	3300031236	Palsa	MTIELKPEHQRMIDLAIQSGAYQNSDEMLDQAFEIIRDKLRLEDWMKEQRETLAPQIA
Ga0302324_1012808713	3300031236	Palsa	MAIDLKPEQQRVIDLAVQSGAYRDPGEVLDQAFEIIREQLDLEDWMLEQRDAVAA
Ga0302324_1032451621	3300031236	Palsa	MMTIDLKPEQQRVIDLAVRSGAYQNPGEVLDQAFEIIREQLDLEGWMFEQREAIAAH
Ga0302324_1035359471	3300031236	Palsa	MTIDLKPEQQRVIDLAVQSGAYRNSGEVLEQAFAIIREQLDFEDWMLEEREAVAAHIEMGFAEAERG
Ga0302326_128979951	3300031525	Palsa	MTIDLKPEQQRVIDLAVQSGAYQNPAEVLDQAFEIIREQLDLEDWMLAQRDEVAAHIATGFAQS
Ga0307474_107291211	3300031718	Hardwood Forest Soil	MVIVLKPEQQRVIDLAVQSGAYQDPDEVVSQAFEIIREQLDLGDWMLEERDAVAAHVAKGFTQA
Ga0302319_102232563	3300031788	Bog	MPIDLKPEQQRVIDLAMRSGAYQTPGEVLHRAFEIIREQLDLEDWMFGQREAIAAHIERGFAQ
Ga0311301_1009690711	3300032160	Peatlands Soil	VTIDLKPEQQRVIDLAVRSGAYQNPGEVLDQAFEIIREQLQLEDWMVEQREAVAAHIETGFAQAQ
Ga0311301_122028531	3300032160	Peatlands Soil	VVIDLKPEQQRVIDLAVQSGAYQNPGEVLDQAFEIIREQLQLEDWMVEQRESVAAHVEI
Ga0311301_122353522	3300032160	Peatlands Soil	VTIELKPEQQRVIDLAVRSGAYQDASDVLDQAFEIIREQLHPEGWMLEKSEAVAAPIEEA
Ga0326728_100146813	3300033402	Peat Soil	VAIDLKPEQQRVIDLAVQSGAYQNPGEVLDQALEIIREQLQLEDWMVEQRDP
Ga0371489_0353914_537_689	3300033755	Peat Soil	MTIQLRPEQERTIDLAIRSGAFRDPQEILDQAFEIIREQLQHEDWLLEQRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075095

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences