Metagenome / Metatranscriptome Family F075089

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075089
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	70 residues
Representative Sequence	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRRAREDAAAHRQPSPR
Number of Associated Samples	104
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.15 %
% of genes near scaffold ends (potentially truncated)	31.93 %
% of genes from short scaffolds (< 2000 bps)	93.28 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.076 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.294 % of family members)
Environment Ontology (ENVO)	Unclassified (34.454 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.975 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.33% β-sheet: 0.00% Coil/Unstructured: 16.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF03401	TctC	78.99
PF00149	Metallophos	0.84
PF01841	Transglut_core	0.84
PF06271	RDD	0.84
PF03061	4HBT	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	78.99
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.08 %
Unclassified	root	N/A	10.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.08 %
Unclassified	root	N/A	10.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.08 %
Unclassified	root	N/A	10.92 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.67 %
Unclassified	root	N/A	10.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.02 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	21.01 %
Unclassified	root	N/A	10.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.84 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	21.01 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.33 %
Unclassified	root	N/A	10.92 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	5.04 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.84 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.72 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	4.20 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.84 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.72 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	4.20 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.84 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.72 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	4.20 %
unclassified Opitutus	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus	0.84 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.72 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	4.20 %
Opitutus sp. WL0086	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. WL0086	0.84 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig100349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100788702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1380	Open in IMG/M
3300001661\|JGI12053J15887_10000444	All Organisms → cellular organisms → Bacteria → Proteobacteria	16756	Open in IMG/M
3300002077\|JGI24744J21845_10021516	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300002568\|C688J35102_118025229	Not Available	523	Open in IMG/M
3300004479\|Ga0062595_100077186	All Organisms → cellular organisms → Bacteria → Proteobacteria	1667	Open in IMG/M
3300005162\|Ga0066814_10010075	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300005164\|Ga0066815_10026853	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005335\|Ga0070666_10565836	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300005341\|Ga0070691_10258448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	937	Open in IMG/M
3300005366\|Ga0070659_100180250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1733	Open in IMG/M
3300005436\|Ga0070713_100558813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1084	Open in IMG/M
3300005440\|Ga0070705_100248678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1247	Open in IMG/M
3300005455\|Ga0070663_101908274	Not Available	534	Open in IMG/M
3300005719\|Ga0068861_100094106	All Organisms → cellular organisms → Bacteria → Proteobacteria	2370	Open in IMG/M
3300006028\|Ga0070717_11350670	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006038\|Ga0075365_10128980	All Organisms → cellular organisms → Bacteria → Proteobacteria	1749	Open in IMG/M
3300006038\|Ga0075365_10335682	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300006038\|Ga0075365_10536575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	827	Open in IMG/M
3300006178\|Ga0075367_10239177	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300006573\|Ga0074055_11863225	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300006574\|Ga0074056_11603205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	610	Open in IMG/M
3300006579\|Ga0074054_12137467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1307	Open in IMG/M
3300006846\|Ga0075430_101393154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	576	Open in IMG/M
3300006953\|Ga0074063_14093245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300006953\|Ga0074063_14269024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300009148\|Ga0105243_10476545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300009156\|Ga0111538_11942391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300009553\|Ga0105249_10792824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1011	Open in IMG/M
3300009553\|Ga0105249_13268189	Not Available	521	Open in IMG/M
3300010154\|Ga0127503_10863413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300010375\|Ga0105239_11046550	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300010401\|Ga0134121_10754300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	929	Open in IMG/M
3300011332\|Ga0126317_10242469	Not Available	521	Open in IMG/M
3300012212\|Ga0150985_105709808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	568	Open in IMG/M
3300012212\|Ga0150985_121381169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	565	Open in IMG/M
3300012469\|Ga0150984_105474957	Not Available	536	Open in IMG/M
3300012469\|Ga0150984_107460204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300012469\|Ga0150984_120871726	Not Available	544	Open in IMG/M
3300012882\|Ga0157304_1066695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	590	Open in IMG/M
3300012908\|Ga0157286_10246107	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300012911\|Ga0157301_10107400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300012915\|Ga0157302_10098911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	917	Open in IMG/M
3300012922\|Ga0137394_10764005	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012925\|Ga0137419_10529719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	939	Open in IMG/M
3300012937\|Ga0162653_100036251	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300012955\|Ga0164298_11241382	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300012957\|Ga0164303_10044038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1935	Open in IMG/M
3300012986\|Ga0164304_11007830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	660	Open in IMG/M
3300012988\|Ga0164306_11908601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300014969\|Ga0157376_11142528	Not Available	806	Open in IMG/M
3300015077\|Ga0173483_10122459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1114	Open in IMG/M
3300015200\|Ga0173480_10316287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	878	Open in IMG/M
3300015242\|Ga0137412_10294265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. WL0086	1275	Open in IMG/M
3300015374\|Ga0132255_100096703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3997	Open in IMG/M
3300017965\|Ga0190266_11340611	Not Available	505	Open in IMG/M
3300018000\|Ga0184604_10332170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300018027\|Ga0184605_10013454	All Organisms → cellular organisms → Bacteria → Proteobacteria	3182	Open in IMG/M
3300018028\|Ga0184608_10079395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1343	Open in IMG/M
3300018051\|Ga0184620_10174500	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300018066\|Ga0184617_1241696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300018071\|Ga0184618_10221674	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300018073\|Ga0184624_10279099	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300018073\|Ga0184624_10453546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300018081\|Ga0184625_10209244	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300018082\|Ga0184639_10084865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1666	Open in IMG/M
3300018082\|Ga0184639_10225950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	991	Open in IMG/M
3300018429\|Ga0190272_12605013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	553	Open in IMG/M
3300018476\|Ga0190274_10561662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1158	Open in IMG/M
3300018481\|Ga0190271_10277041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1726	Open in IMG/M
3300019356\|Ga0173481_10580172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300019361\|Ga0173482_10194327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300019876\|Ga0193703_1037969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300021082\|Ga0210380_10083933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1399	Open in IMG/M
3300021082\|Ga0210380_10175737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	964	Open in IMG/M
3300021286\|Ga0179583_1053297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300025899\|Ga0207642_11026042	Not Available	532	Open in IMG/M
3300025903\|Ga0207680_11330556	Not Available	510	Open in IMG/M
3300025909\|Ga0207705_11533769	Not Available	504	Open in IMG/M
3300025918\|Ga0207662_10022312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3628	Open in IMG/M
3300025926\|Ga0207659_10464140	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300025928\|Ga0207700_10217054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1619	Open in IMG/M
3300025935\|Ga0207709_10337660	All Organisms → cellular organisms → Bacteria → Proteobacteria	1133	Open in IMG/M
3300025986\|Ga0207658_10063639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2765	Open in IMG/M
3300026067\|Ga0207678_11003861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300027181\|Ga0208997_1018195	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300027633\|Ga0208988_1084899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300027669\|Ga0208981_1004886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3309	Open in IMG/M
3300027866\|Ga0209813_10394747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	556	Open in IMG/M
3300028597\|Ga0247820_10769055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300028707\|Ga0307291_1140643	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300028708\|Ga0307295_10113802	Not Available	736	Open in IMG/M
3300028716\|Ga0307311_10258702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	518	Open in IMG/M
3300028754\|Ga0307297_10102304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	943	Open in IMG/M
3300028754\|Ga0307297_10218557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	670	Open in IMG/M
3300028782\|Ga0307306_10027138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1340	Open in IMG/M
3300028784\|Ga0307282_10040669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2045	Open in IMG/M
3300028811\|Ga0307292_10141519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300028812\|Ga0247825_11463612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	501	Open in IMG/M
3300028872\|Ga0307314_10154996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	665	Open in IMG/M
3300028880\|Ga0307300_10107336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	848	Open in IMG/M
3300030829\|Ga0308203_1023019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	823	Open in IMG/M
3300030830\|Ga0308205_1038115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300030830\|Ga0308205_1057392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300030902\|Ga0308202_1035870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	858	Open in IMG/M
3300030903\|Ga0308206_1035992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	924	Open in IMG/M
3300030903\|Ga0308206_1137528	Not Available	578	Open in IMG/M
3300030903\|Ga0308206_1181324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300031058\|Ga0308189_10163453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	776	Open in IMG/M
3300031091\|Ga0308201_10122908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	780	Open in IMG/M
3300031091\|Ga0308201_10298836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300031092\|Ga0308204_10053112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	992	Open in IMG/M
3300031152\|Ga0307501_10007977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1662	Open in IMG/M
3300031170\|Ga0307498_10402077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	539	Open in IMG/M
3300031226\|Ga0307497_10028417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1801	Open in IMG/M
3300031231\|Ga0170824_115043774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300031366\|Ga0307506_10440230	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300031892\|Ga0310893_10372957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300034147\|Ga0364925_0046824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1461	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.79%
Host-Associated	Host-Associated	25.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.18%
Plants	Host-Associated → Plants	25.21%
Aquatic	Environmental → Aquatic	12.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.97%
Sediment	Environmental → Aquatic → Sediment	9.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.04%
Roots	Host-Associated → Plants → Roots	4.20%
Freshwater	Environmental → Aquatic → Freshwater	3.36%
Floodplain	Environmental → Terrestrial → Floodplain	0.84%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.24%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.72%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.68%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.84%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_04712760	2124908045	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDTDGRTRSRHAREYAAAHRQPSPR
INPhiseqgaiiFebDRAFT_1007887022	3300000364	Soil	MXSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRTRTRARSRRRARXXXAATYRQPAVX*
JGI12053J15887_1000044411	3300001661	Forest Soil	MDSKMFHQRARDCLRLADECPDLYAREALVELADDFKQMAKLLETDSRPRTRRQRTARDDATIGSLRRGDSEARSP*
JGI24744J21845_100215161	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQPSP
C688J35102_1180252291	3300002568	Soil	MDSKMFDSKMFHQRARDCFRLADECPDLYAREALMELADEFKHMATQLDADARTRSRRQRSAREDAAAHRQHSPR*
Ga0062595_1000771862	3300004479	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVETDAQTRVRARSRRRRSVMEDAAAHR*
Ga0066814_100100752	3300005162	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRRSAREDAAAHRQPSPR*
Ga0066815_100268532	3300005164	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRRSAREDAAAHRQPSPR*
Ga0070666_105658361	3300005335	Switchgrass Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHTATQLDSDARTRARSGRQRRAREDAGAHRHPSPR*
Ga0070691_102584482	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQPSPR*
Ga0070659_1001802502	3300005366	Corn Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRPAREHAAAHR*
Ga0070713_1005588131	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADAPTRVRARSRRRRSVVEDAAAHR*
Ga0070705_1002486781	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHTATQLDSDARTRAHSRRQRREDVAAHRHPSPR*
Ga0070663_1019082741	3300005455	Corn Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDTDGRTRSRHAREYAAAHRQPSPR*
Ga0068861_1000941064	3300005719	Switchgrass Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQPSPR*
Ga0070717_113506702	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQLSPR*
Ga0075365_101289802	3300006038	Populus Endosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDTDVRTRSRHAREYAAAHRQPSPR*
Ga0075365_103356823	3300006038	Populus Endosphere	MDSKMFHQRAQDCLRLADECPDLYAREALVELADEFKQMGQMLEAEARTRTRARRRDQSRDETVAHRQFSAR*
Ga0075365_105365752	3300006038	Populus Endosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDTDVRTRSSRRRPAREDTAHRQPSPR*
Ga0075367_102391772	3300006178	Populus Endosphere	MDSKMFHQRARDCLRLADECPDLYAREALVELADEFKQMGQMLEAEARTRTRARRRDQSRDETVAHRQLSAR*
Ga0074055_118632252	3300006573	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRRAREDAAAHRQPSPR*
Ga0074056_116032052	3300006574	Soil	MNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRARDDAATYRQPAVR*
Ga0074054_121374672	3300006579	Soil	MDSKMFHQRAQDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRPAREHAAAHR*
Ga0075430_1013931541	3300006846	Populus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADAQTRVRARSRRRRSVVEDAAAHR*
Ga0074063_140932451	3300006953	Soil	MNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRTRIRARPRRRAREDAATYRQPAVR*
Ga0074063_142690242	3300006953	Soil	MDSKMFHQRARDCLRLADECPDLYAREALVELADEFKQMGNMLETEARTRTRARSRRRDQVRDDSVSHRQPSAR*
Ga0105243_104765452	3300009148	Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADAQTRVRARSRRRRSVMEDAAAHR*
Ga0111538_119423912	3300009156	Populus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDSDARTRTCSRRQPRAREDNAAHRHSSPR*
Ga0105249_107928241	3300009553	Switchgrass Rhizosphere	RDCLRLADECPDLYAREALMELAAEFKHMANMVEADAQTRVRARSRRRRSVVEDAAAHR*
Ga0105249_132681892	3300009553	Switchgrass Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATRLDADARTRTRSRRQRPAREDTAA
Ga0127503_108634132	3300010154	Soil	MNSNMFHQRARDCVRLAAECPDLYAREALMELADEFKQMARQLETDARTRARPRRRAREDAATSREDAATYRQPAVR*
Ga0105239_110465502	3300010375	Corn Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQP
Ga0134121_107543001	3300010401	Terrestrial Soil	DAMDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQLSPR*
Ga0126317_102424691	3300011332	Soil	SKMFHQRAQDCLRLADECPDLYAREALMELADEFKHMATQLDADALTRTRARRQRPAREDAAAHRQPSPR*
Ga0150985_1057098082	3300012212	Avena Fatua Rhizosphere	MDSKMFDSKMFHQRTRDCFRLADECPDLYAREALMELADEFKHMATQLDADARTRSRRQRSAREDAAAHRQHSPR*
Ga0150985_1213811691	3300012212	Avena Fatua Rhizosphere	SDDMDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQVDADARTRSRRQLAARQDAAAHR*
Ga0150984_1054749572	3300012469	Avena Fatua Rhizosphere	SDLDMDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADALTRTRARRQRPAREDAAAHRQPSPR*
Ga0150984_1074602041	3300012469	Avena Fatua Rhizosphere	MDSKMFYQRARDCLRLADECPDLYAREALMELADEFKHMATQVDADARTRSRRQRAAREDAAAHR*
Ga0150984_1208717261	3300012469	Avena Fatua Rhizosphere	SDDMDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMATQVDADARTRSRRQLAGRQDAAAHR*
Ga0157304_10666952	3300012882	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFSHMANMVEADDAQTRRRSVVEDAAAHR*
Ga0157286_102461072	3300012908	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVETDAQTRVRARSRRRRSVMGDAAAHR*
Ga0157301_101074002	3300012911	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADVQRRVRARSRRRRSVMEDAAAHR*
Ga0157302_100989111	3300012915	Soil	GPGSDDMDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVETDAQTRVRARSRRRRSVMEDAAAHR*
Ga0137394_107640052	3300012922	Vadose Zone Soil	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADARTRTRARSRRRTR
Ga0137419_105297192	3300012925	Vadose Zone Soil	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADARTRTRARPRRRAREDAATYRQPAVR*
Ga0162653_1000362511	3300012937	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFRHMATQLDADARTRTRSRRQRLA
Ga0164298_112413822	3300012955	Soil	MDSKMFHQRARDCLRLADECPDLYAREALVELADEFKQMGNTLETEARTRTRARSRRRD
Ga0164303_100440383	3300012957	Soil	MDSKMFHQRARDCLRLADECPDLYAREALVELADEFKQMGNTLETEARTRTRARSRRRDQVRDDSVSHRQPSAR*
Ga0164304_110078302	3300012986	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADAPTRVRARSPRRRSVVEDAAAHR*
Ga0164306_119086012	3300012988	Soil	GSDDMDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADAPTRVRARSPRRRSVVEDAAAHR*
Ga0157376_111425282	3300014969	Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADAPTRVRARSPRRRSVVD*
Ga0173483_101224592	3300015077	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFSHMANMVEADAQTRVRARSRRRRSVVEDAAAHR*
Ga0173480_103162872	3300015200	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADDAQTRRRSVVEDAAAHR*
Ga0137412_102942653	3300015242	Vadose Zone Soil	MNSNMFHQRARDCLRLAAECPDLYAREALMELANEFKQMARQLEADARTRTRARHPRRAREDAATYRQPAVR*
Ga0132255_1000967032	3300015374	Arabidopsis Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVETDAQTRVRARSRRRRSVVEDAAAHR*
Ga0190266_113406111	3300017965	Soil	MDSKMFHQRAQDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQGPAREDAAAHRQPSPR
Ga0184604_103321702	3300018000	Groundwater Sediment	MNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRAREDAATYRQPAVR
Ga0184605_100134544	3300018027	Groundwater Sediment	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADARTRTRARPRRRAREDAATYRQPAVR
Ga0184608_100793952	3300018028	Groundwater Sediment	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRAREDAATYRQPAVR
Ga0184620_101745001	3300018051	Groundwater Sediment	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADARTRTRARPRRRAREDAATY
Ga0184617_12416962	3300018066	Groundwater Sediment	MNSNMFHQRARDCLRRAAACPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRAREDAATYRQPAVR
Ga0184618_102216741	3300018071	Groundwater Sediment	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADARTRTRARPRRRAREDAATYRQ
Ga0184624_102790991	3300018073	Groundwater Sediment	MDSKMFHQRAQDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRSRRQRPAREDAAHRQPSPR
Ga0184624_104535461	3300018073	Groundwater Sediment	HEMNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRAREDAATYRQPAVR
Ga0184625_102092442	3300018081	Groundwater Sediment	MDSKMFHQRAQDCLRLADECPDLYAREALMELADEFKDMATQLDADVRTRTRSRRRSAREDAAAHRQCLRQGEVKT
Ga0184639_100848652	3300018082	Groundwater Sediment	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRPAREDAAAHRQPSPR
Ga0184639_102259502	3300018082	Groundwater Sediment	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADTRTRTPARRRAREDAATYRQPAVR
Ga0190272_126050132	3300018429	Soil	MDSKMFHQRAQDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRPAREDATAHRQPSPR
Ga0190274_105616622	3300018476	Soil	MDSKMFHQRAQDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRGQRPAREDAAAHRQPSPR
Ga0190271_102770413	3300018481	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRPARDDAAAHRQPSPR
Ga0173481_105801721	3300019356	Soil	DDMDSKMFHQRARDCLRLADECPDLYAREALMELAAEFSHMANMVEADDAQTRRRSVVEDAAAHR
Ga0173482_101943272	3300019361	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFSHMANMVEADDAQTRRRSVVEDAAAHR
Ga0193703_10379692	3300019876	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRSRRQRPAREDAAHRQPSPM
Ga0210380_100839332	3300021082	Groundwater Sediment	MNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRTRTRARPRRRAREDAATYRQPAVR
Ga0210380_101757372	3300021082	Groundwater Sediment	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRRSAREDAAAHRQPSPR
Ga0179583_10532972	3300021286	Vadose Zone Soil	DDMDPKMFHQRARDCLRLADECPDLYAREALMELADEFKHMAAQLDADALARTRSRRQRPAREDAAAHRQPSPR
Ga0207642_110260422	3300025899	Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALVELADEFKQMGNMLETEARTRTRARSRRRDQVRDDSVSHRQPSAR
Ga0207680_113305561	3300025903	Switchgrass Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVETDAQTRVRARSRRRRSVMEDAAAHR
Ga0207705_115337691	3300025909	Corn Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQPS
Ga0207662_100223124	3300025918	Switchgrass Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRPAREHAAAHR
Ga0207659_104641402	3300025926	Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVETDAQTRVRARSRRRRSVMEDAAAH
Ga0207700_102170542	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQPSPR
Ga0207709_103376602	3300025935	Miscanthus Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVEADAQTRVRARSRRRRSVMEDAAAHR
Ga0207658_100636392	3300025986	Switchgrass Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDTDVRTRSRHAREYAAAHRQPSPR
Ga0207678_110038612	3300026067	Corn Rhizosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHTATQLDSDARTRARSGRQRRAREDAGAHRHPSPR
Ga0208997_10181952	3300027181	Forest Soil	MDSKMFHQRARDCLRLADECPDLYAREALVELADDFKQMAKLLETDSRPRTRRQRTARDDATIGSLRRGDSEARSP
Ga0208988_10848992	3300027633	Forest Soil	SKMFHQRARDCLRLADECPDLYAREALVELADDFKQMAKLLETDSRPRTRRQRTARDDATIGSLRRGDSEARSP
Ga0208981_10048862	3300027669	Forest Soil	MDSKMFHQRARDCLRLADECPDLYAREALVELADDFKQMAKLLEIDSRPRTRRQRTARDDATIGSLRRGDSEARSP
Ga0209813_103947472	3300027866	Populus Endosphere	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDTDVRTRSSRRRPAREDTAHRQPSPR
Ga0247820_107690552	3300028597	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRQRPAREDAATHRQPSPR
Ga0307291_11406432	3300028707	Soil	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADARTRTRARSRRRAREDAATYRQPAVR
Ga0307295_101138022	3300028708	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMAAQLDADARTRTRSRRQRPAREDAAAHRQPSPR
Ga0307311_102587022	3300028716	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRSRRQRPAREDAAHRH
Ga0307297_101023041	3300028754	Soil	MNSNMFHQRARDCLRLAAECPDLYAREALMELADEFKQMARQLEADARTRTRARSRGRARREDAATYRQPAVR
Ga0307297_102185572	3300028754	Soil	MDSKMFYQRARDCLRLADECPDLYAREALMELADEFKHMATQVDADARTRSRRRPPREDVAAYRQPSPR
Ga0307306_100271382	3300028782	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRPAREHAAAHR
Ga0307282_100406692	3300028784	Soil	MNSNMFHQRARDCLRFAAECPDLYAREALMELADEFKQMARQLEADARTRTRARPRRRAREDAATYRQPAVR
Ga0307292_101415192	3300028811	Soil	MNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRSREDAATYRQPAVR
Ga0247825_114636122	3300028812	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAAEFKHMANMVETDAQTRVRARSRRRRS
Ga0307314_101549962	3300028872	Soil	MDSKMFYQRARDCLRLADECPDLYAREALMELADEFKHMATQVDADARTRSRRQLAARQDAAAHR
Ga0307300_101073362	3300028880	Soil	RARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRAREDAATYRQPAVR
Ga0308203_10230192	3300030829	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQVDADARTRSRRRPPRDDVAAYRQASPR
Ga0308205_10381151	3300030830	Soil	PGSREMNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRAREDAATYRQPAVR
Ga0308205_10573921	3300030830	Soil	DDMDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQVDADARTRSRRRPPRDDVAAYRQASPR
Ga0308202_10358701	3300030902	Soil	DDMDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQVDADARTRSRRRPPREDVAAYRQPSPR
Ga0308206_10359922	3300030903	Soil	DDMDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRRSAREDAAALGSLRQGEVKT
Ga0308206_11375281	3300030903	Soil	MDSKMFHQRAWDCLRLADECPDLYAREALVELADDFKQMAKLLETDSRPRTRRQRTTRDDATIGSLRRGDSEARSP
Ga0308206_11813242	3300030903	Soil	HEMNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADARTRARPRRRAREDAATYRQPAVR
Ga0308189_101634532	3300031058	Soil	DDMDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQVDADARTRSRRQLAARQDAAAHR
Ga0308201_101229081	3300031091	Soil	GMDSKMFHQRAWDCLRLADECPDLYAREALVELADDFKQMAKLLETDSRPRTRRQRTARDDATIGSLRRGDSEARSP
Ga0308201_102988362	3300031091	Soil	DDMDSKMFHQRARDCLRLADECPDLYAREALMELADEFRHMATQLDADARTRTRSRRQRLAREDAAAHRQASPR
Ga0308204_100531122	3300031092	Soil	SREMNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMARQLEADTRMRTRARPRRRAREDAATYRQPAVR
Ga0307501_100079773	3300031152	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRSRRQRPAREDAAHRQPSPR
Ga0307498_104020771	3300031170	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRRSAREGAAALGSLRQGEVKT
Ga0307497_100284172	3300031226	Soil	MNSNMFHQRARDCLRLATECPDLYAREALMELADEFKQMAQQLEADTRMRTRARPRRRARDDAATYRQPAVR
Ga0170824_1150437741	3300031231	Forest Soil	HQRARDCLRLATECPDLYAREALMELADEFKQMARQIEADTRTRTPARRRAREDAATYRQPAAR
Ga0307506_104402301	3300031366	Soil	MDSKMFHQRARDCLRLAEECPDLYAREALMELADEFKHMATQLDADARTRTRSRRQRRAREDVAAHRQPSPR
Ga0310893_103729572	3300031892	Soil	MDSKMFHQRARDCLRLADECPDLYAREALMELAGEFKHMATQLDADARTRTRSRRRSAREDAAAHRQPSPR
Ga0364925_0046824_1257_1460	3300034147	Sediment	MFHQRARDCLRLADECPDLYAREALMELADEFKHMATQLDADARTRTRSRRRSAREDAAAHRQPSPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075089

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences