Metagenome Family F075051

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075051
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	66 residues
Representative Sequence	MQILTWDDRKNPSQPRALIQQGRCDEGQCNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Number of Associated Samples	94
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.02 %
% of genes near scaffold ends (potentially truncated)	25.21 %
% of genes from short scaffolds (< 2000 bps)	86.55 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.261 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (26.891 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.98% β-sheet: 24.73% Coil/Unstructured: 61.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04679	DNA_ligase_A_C	9.24
PF07043	DUF1328	3.36
PF03551	PadR	2.52
PF00589	Phage_integrase	2.52
PF00582	Usp	1.68
PF00583	Acetyltransf_1	1.68
PF08357	SEFIR	1.68
PF13620	CarboxypepD_reg	1.68
PF12543	DUF3738	1.68
PF14280	DUF4365	1.68
PF00069	Pkinase	1.68
PF01814	Hemerythrin	0.84
PF13205	Big_5	0.84
PF02687	FtsX	0.84
PF12681	Glyoxalase_2	0.84
PF00701	DHDPS	0.84
PF01261	AP_endonuc_2	0.84
PF16576	HlyD_D23	0.84
PF00174	Oxidored_molyb	0.84
PF13578	Methyltransf_24	0.84
PF00196	GerE	0.84
PF06906	DUF1272	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	9.24
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.72
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	3.36
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.52
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.52
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.52
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.68
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.84
COG3813	Uncharacterized conserved protein, DUF1272 domain	Function unknown [S]	0.84
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
All Organisms	root	All Organisms	48.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
cellular organisms	root	All Organisms → cellular organisms	48.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.36 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.08 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	6.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.08 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	6.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.84 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.84 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.08 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	6.72 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.68 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.84 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.08 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	6.72 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.68 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.68 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.08 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	6.72 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	1.68 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.68 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.84 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|F0B48LX02JJJU0	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300000956\|JGI10216J12902_105567365	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300003203\|JGI25406J46586_10001463	All Organisms → cellular organisms → Bacteria	11125	Open in IMG/M
3300003203\|JGI25406J46586_10093687	Not Available	903	Open in IMG/M
3300004156\|Ga0062589_102809857	Not Available	508	Open in IMG/M
3300004643\|Ga0062591_101461307	Not Available	681	Open in IMG/M
3300005294\|Ga0065705_10633404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300005347\|Ga0070668_100101505	All Organisms → cellular organisms → Bacteria → Acidobacteria	2280	Open in IMG/M
3300005437\|Ga0070710_10949918	Not Available	623	Open in IMG/M
3300005466\|Ga0070685_11171499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	583	Open in IMG/M
3300005468\|Ga0070707_100843513	Not Available	880	Open in IMG/M
3300005468\|Ga0070707_101880382	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300005526\|Ga0073909_10004581	All Organisms → cellular organisms → Bacteria	4078	Open in IMG/M
3300005526\|Ga0073909_10152458	Not Available	965	Open in IMG/M
3300005535\|Ga0070684_100119909	All Organisms → cellular organisms → Bacteria	2366	Open in IMG/M
3300005536\|Ga0070697_101806348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	547	Open in IMG/M
3300005718\|Ga0068866_10831151	Not Available	644	Open in IMG/M
3300005719\|Ga0068861_101923843	Not Available	589	Open in IMG/M
3300005764\|Ga0066903_100258807	All Organisms → cellular organisms → Bacteria	2697	Open in IMG/M
3300005764\|Ga0066903_100732791	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300005764\|Ga0066903_104687194	Not Available	728	Open in IMG/M
3300005842\|Ga0068858_100320289	All Organisms → cellular organisms → Bacteria → Acidobacteria	1482	Open in IMG/M
3300006050\|Ga0075028_100590956	Not Available	658	Open in IMG/M
3300006196\|Ga0075422_10490233	Not Available	556	Open in IMG/M
3300006237\|Ga0097621_100098769	All Organisms → cellular organisms → Bacteria → Acidobacteria	2453	Open in IMG/M
3300006237\|Ga0097621_101211894	Not Available	711	Open in IMG/M
3300006358\|Ga0068871_101271299	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300006358\|Ga0068871_101636827	Not Available	610	Open in IMG/M
3300006844\|Ga0075428_101708785	Not Available	656	Open in IMG/M
3300006845\|Ga0075421_101368368	Not Available	780	Open in IMG/M
3300006852\|Ga0075433_10217573	All Organisms → cellular organisms → Bacteria → Acidobacteria	1697	Open in IMG/M
3300006854\|Ga0075425_101032417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	937	Open in IMG/M
3300006871\|Ga0075434_100934490	Not Available	882	Open in IMG/M
3300006871\|Ga0075434_101322754	Not Available	731	Open in IMG/M
3300006904\|Ga0075424_101109737	Not Available	843	Open in IMG/M
3300007076\|Ga0075435_100212369	Not Available	1642	Open in IMG/M
3300007076\|Ga0075435_100580172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	972	Open in IMG/M
3300009094\|Ga0111539_10080841	All Organisms → cellular organisms → Bacteria → Acidobacteria	3823	Open in IMG/M
3300009094\|Ga0111539_10332571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1768	Open in IMG/M
3300009098\|Ga0105245_12243250	Not Available	600	Open in IMG/M
3300009147\|Ga0114129_11779914	Not Available	750	Open in IMG/M
3300009148\|Ga0105243_12653481	Not Available	541	Open in IMG/M
3300009174\|Ga0105241_12494648	Not Available	518	Open in IMG/M
3300009177\|Ga0105248_10754117	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300010039\|Ga0126309_11225292	Not Available	517	Open in IMG/M
3300010043\|Ga0126380_10095094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1770	Open in IMG/M
3300010043\|Ga0126380_10453328	Not Available	970	Open in IMG/M
3300010046\|Ga0126384_11060581	Not Available	741	Open in IMG/M
3300010359\|Ga0126376_11431394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300010360\|Ga0126372_10957891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300010361\|Ga0126378_13134224	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_10143882	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300010366\|Ga0126379_10330502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1545	Open in IMG/M
3300010376\|Ga0126381_100004445	All Organisms → cellular organisms → Bacteria	15280	Open in IMG/M
3300010376\|Ga0126381_101757341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300010398\|Ga0126383_10431523	All Organisms → cellular organisms → Bacteria → Proteobacteria	1362	Open in IMG/M
3300010398\|Ga0126383_11982942	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	670	Open in IMG/M
3300010400\|Ga0134122_11644932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	668	Open in IMG/M
3300010401\|Ga0134121_10308208	Not Available	1404	Open in IMG/M
3300010401\|Ga0134121_12550659	Not Available	554	Open in IMG/M
3300010403\|Ga0134123_10003100	All Organisms → cellular organisms → Bacteria → Acidobacteria	10818	Open in IMG/M
3300011119\|Ga0105246_11878099	Not Available	574	Open in IMG/M
3300012096\|Ga0137389_11165461	Not Available	660	Open in IMG/M
3300012212\|Ga0150985_110799561	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300012212\|Ga0150985_111669297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1632	Open in IMG/M
3300012232\|Ga0137435_1200046	Not Available	613	Open in IMG/M
3300012469\|Ga0150984_105240743	Not Available	517	Open in IMG/M
3300012469\|Ga0150984_117697393	Not Available	1932	Open in IMG/M
3300012895\|Ga0157309_10304935	Not Available	539	Open in IMG/M
3300012898\|Ga0157293_10122561	Not Available	700	Open in IMG/M
3300012922\|Ga0137394_11143040	Not Available	643	Open in IMG/M
3300012944\|Ga0137410_11861821	Not Available	532	Open in IMG/M
3300012958\|Ga0164299_10550305	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300012960\|Ga0164301_11070555	Not Available	639	Open in IMG/M
3300012971\|Ga0126369_10008790	All Organisms → cellular organisms → Bacteria	7655	Open in IMG/M
3300012971\|Ga0126369_11952504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300013296\|Ga0157374_11469596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	705	Open in IMG/M
3300013306\|Ga0163162_12473094	Not Available	597	Open in IMG/M
3300013308\|Ga0157375_10662915	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300014325\|Ga0163163_10879141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300014325\|Ga0163163_11135767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	844	Open in IMG/M
3300014325\|Ga0163163_11203219	Not Available	820	Open in IMG/M
3300015201\|Ga0173478_10369541	Not Available	676	Open in IMG/M
3300015373\|Ga0132257_100017909	All Organisms → cellular organisms → Bacteria	7385	Open in IMG/M
3300015373\|Ga0132257_103994028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	537	Open in IMG/M
3300016357\|Ga0182032_10569841	Not Available	939	Open in IMG/M
3300017965\|Ga0190266_11202025	Not Available	525	Open in IMG/M
3300018000\|Ga0184604_10282337	Not Available	584	Open in IMG/M
3300018051\|Ga0184620_10151368	Not Available	750	Open in IMG/M
3300018422\|Ga0190265_11964955	Not Available	691	Open in IMG/M
3300018432\|Ga0190275_13025751	Not Available	544	Open in IMG/M
3300018469\|Ga0190270_11243446	Not Available	785	Open in IMG/M
3300018476\|Ga0190274_12301728	Not Available	636	Open in IMG/M
3300018481\|Ga0190271_10065390	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	3182	Open in IMG/M
3300018481\|Ga0190271_12368106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300018482\|Ga0066669_10170675	Not Available	1628	Open in IMG/M
3300018920\|Ga0190273_10748529	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300019377\|Ga0190264_11131433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	642	Open in IMG/M
3300020027\|Ga0193752_1245359	Not Available	657	Open in IMG/M
3300020580\|Ga0210403_11167479	Not Available	595	Open in IMG/M
3300022756\|Ga0222622_10640583	Not Available	769	Open in IMG/M
3300025907\|Ga0207645_10121553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1695	Open in IMG/M
3300025922\|Ga0207646_10918398	Not Available	776	Open in IMG/M
3300025941\|Ga0207711_10308431	All Organisms → cellular organisms → Bacteria → Acidobacteria	1461	Open in IMG/M
3300025941\|Ga0207711_10792920	Not Available	882	Open in IMG/M
3300026023\|Ga0207677_10895017	Not Available	800	Open in IMG/M
3300026035\|Ga0207703_10100501	All Organisms → cellular organisms → Bacteria	2451	Open in IMG/M
3300026116\|Ga0207674_10665510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1005	Open in IMG/M
3300026118\|Ga0207675_100815319	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300027821\|Ga0209811_10009842	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300027874\|Ga0209465_10159729	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300027907\|Ga0207428_10351857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300031469\|Ga0170819_12303002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	638	Open in IMG/M
3300031908\|Ga0310900_11024348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	680	Open in IMG/M
3300032003\|Ga0310897_10689065	Not Available	512	Open in IMG/M
3300032074\|Ga0308173_10872199	Not Available	831	Open in IMG/M
3300032074\|Ga0308173_11805407	Not Available	576	Open in IMG/M
3300032157\|Ga0315912_10000239	All Organisms → cellular organisms → Bacteria	117047	Open in IMG/M
3300032157\|Ga0315912_10370486	Not Available	1132	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.66%
Host-Associated	Host-Associated	40.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.46%
Plants	Host-Associated → Plants	40.34%
Aquatic	Environmental → Aquatic	4.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.76%
Roots	Host-Associated → Plants → Roots	5.88%
Sediment	Environmental → Aquatic → Sediment	4.20%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.33%
Loam	Environmental → Terrestrial → Soil → Loam	9.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.40%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	3.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_09309850	2170459002	Grass Soil	VEDRRNPAIPRVTIQQGGCEVGQCGQFSISISNGQRGMTVRFESEQEFREFLERGTVEQLQDR
JGI10216J12902_1055673651	3300000956	Soil	MEIFVWEDRRPARQPRAVVQRGRCDENQCGQFSISISNGERGMTVRFATEQEFRDFLERGTAEQP*
JGI25406J46586_100014636	3300003203	Tabebuia Heterophylla Rhizosphere	MEIFVWDDRRDPNVPRAIIQRGRCADGHCGQFSISISNGERGMTVRFESEDEFRQFLERGAVEQR*
JGI25406J46586_100936872	3300003203	Tabebuia Heterophylla Rhizosphere	MEIFVWDDRRDPNVPRAMIQRGRCADGQCGQFSISISNGERGMTARFESEDEFRQFLERGAVERR*
Ga0062589_1028098571	3300004156	Soil	MQILTWDDRKNPSQPRALVQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0062591_1014613072	3300004643	Soil	ALSRTHSAMEIRTWEDRRQPSAPRVTIQQGAPEHGQCGQFSISISNGERGMTVRFDSEQEFRELLQRGAVEQS*
Ga0065705_106334042	3300005294	Switchgrass Rhizosphere	MQILTWDDRKHPSRPRALIQQGRCDEGQCNQFSISISNGERGMTVRFDSEAEFRLFLEHG
Ga0070668_1001015053	3300005347	Switchgrass Rhizosphere	MQILTWDDRRNPSRPRAVIQQGRCDLDQCGQFSISISNGERGLTVRFDSEEEFRRFLERGAVEKVPL*
Ga0070710_109499182	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MEIRTWEDRRNPAVPRVTIQQGSCERGQCGHFSISISNGERGMTVRFDSEAEFRHFLERGTVE
Ga0070685_111714992	3300005466	Switchgrass Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSETEFRNFLERGAAEKR*
Ga0070707_1008435131	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEIYVWEDRHARRQPRALMQRGRCAENHCGQFSISISDGERGMTVRFASEQEFREFLERGSVEQAS*
Ga0070707_1018803822	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRLFLEHGAAEKR*
Ga0073909_100045814	3300005526	Surface Soil	MEIRTWEDRRTPPVPRVTIQQGGCDVGQCRQFSISISNGQRGMTVRFESEAEFREFLERGAVEHS*
Ga0073909_101524583	3300005526	Surface Soil	MEIRIWEDRRNPAVPRVTIQQGSCEINQCGQFSISISNGERGMTVRFESEAEFRQFLERGAAEQSQDR*
Ga0070684_1001199092	3300005535	Corn Rhizosphere	MEIRTWYDHRTPAKPRVTIQQGSCQIGQCGQFSISICDGKRGMTVRFDCEAEFRQFLERGTVEQS*
Ga0070697_1018063481	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	WDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0068866_108311512	3300005718	Miscanthus Rhizosphere	GMEIRTWEDRRTPARPRVSIQQGSCDLAQCGQFSISISNGERGMTVRFDSEAEFREFLERGRVEQS*
Ga0068861_1019238432	3300005719	Switchgrass Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDDGECNQFSISISNGERGMTVRFDSETEFRNFLERGAAEKR*
Ga0066903_1002588074	3300005764	Tropical Forest Soil	MEIRTWEDRRDQAVPRITIQQGSCEVGQCGQFSISISNGRCGMTVRFESEAEFREFLERGEALVSL*
Ga0066903_1007327913	3300005764	Tropical Forest Soil	MEIRTWDDHRDPAVPRVNIQQGSCAVGQCGQFSISISNGQRGMTVRFDSEAEFREFLERGTAEQL*
Ga0066903_1046871942	3300005764	Tropical Forest Soil	MEIRTWDDQRTPAVPRITMQQGGCDLGHCGQFSISISNGRRGMTVRFDSEAEFREFLERGVAEASSLA*
Ga0068858_1003202892	3300005842	Switchgrass Rhizosphere	MEIRTWEDRRQPSAPRVTIQQGACEHGQCGQLSISISNGERGMTVRFDSEQEFRELLQRGAVEQS*
Ga0075028_1005909561	3300006050	Watersheds	MQIFAWEDRKKRNAPHALIQQGRCEQNQCGLFSISISNGENGMTVRFDSEAEFRDFLERGAAEQG*
Ga0075422_104902331	3300006196	Populus Rhizosphere	MEIFGWPDRRDPNVPRAIIQQGRCAQNQCGQFSISINSGERGMTIRFESEAEFRGVPRAR
Ga0097621_1000987693	3300006237	Miscanthus Rhizosphere	MEIRTWEDRRTPARPRVSIQQGSCDLAQCGQFSISISNGERGMTVRFDSEAEFREFLERGRVEQS*
Ga0097621_1012118941	3300006237	Miscanthus Rhizosphere	MEIRTWEDRRTPAVPRVTIQQGTCELGQCGQFSISISNGQRGMTVRFESEAEFREFLERGQVEKL*
Ga0068871_1012712991	3300006358	Miscanthus Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDDGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0068871_1016368271	3300006358	Miscanthus Rhizosphere	GSSMEIRTWEDRRTPAVPRVTIQQGTCELGQCGQFSISISNGQRGMTVRFESEAEFREFLERGQVEKL*
Ga0075428_1017087851	3300006844	Populus Rhizosphere	SGAVKRGMEIFGWPDRRDPNVPRAIIQQGRCAQNQCGQFSISINSGERGMTIRFESEAEFREFLEHGAVEKR*
Ga0075421_1013683681	3300006845	Populus Rhizosphere	MEIFGWPDRRDPNVPRAIIQQGRCAQNQCGQFSISINSGERSMTIRFESEAEFREFLEHGAVEKR*
Ga0075433_102175733	3300006852	Populus Rhizosphere	MEIFGWPDRRDPNVPRAIIQQGRCAQNQCGQFSISINSGERGMTIRFESEAEFREFLEHGAVEKR*
Ga0075425_1010324172	3300006854	Populus Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCHEGECNQFSISISNGERGMTVRFDSEAEFRNFLERG
Ga0075434_1009344902	3300006871	Populus Rhizosphere	MEIRTWEDRSTPAVPRVTLQQGSWETGQCGQFSISISNGQRGMTVRFESEEEFREFLTRGETSTLV*
Ga0075434_1013227541	3300006871	Populus Rhizosphere	SPQGLPSDSGAVKRGMEIFGWPDRRDPNVPRAIIQQGRCAQNQCGQFSISINSGERGMTIRFESEAEFREFLEHGAVEKR*
Ga0075424_1011097373	3300006904	Populus Rhizosphere	RTWEDRRTPAVPRITLQTGSCNAGQCGQFSISISNGQRGMTVRFESEEEFREFLTRGETSTLV*
Ga0075435_1002123691	3300007076	Populus Rhizosphere	MEIRTWEDRRTPAVPRVTLQQGSCETGQCRQFSISISNAQSGMTVRFESDAEFREFLERGVSEQL*
Ga0075435_1005801721	3300007076	Populus Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCHEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAGRARVAD*
Ga0111539_100808412	3300009094	Populus Rhizosphere	MQILTWDDRKHPSRPRALIQQGRCDEGQCNQFSISISNGERGMTVRFDSEAEFRLFLEHGAAEKR*
Ga0111539_103325715	3300009094	Populus Rhizosphere	MEIFGWPDRRAPNVPRAIIQQGRCAQNQCGQFSISINSGERGMTIRFESEAEFREFLEHGAVEKR*
Ga0105245_122432501	3300009098	Miscanthus Rhizosphere	MQILTWDERRNPTQPRALIQQGRCNEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0114129_117799141	3300009147	Populus Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSETEFRKFLERGAVEKR*
Ga0105243_126534811	3300009148	Miscanthus Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0105241_124946481	3300009174	Corn Rhizosphere	MQILTWDDRKNPSQPRALIQRGRCDDGECHQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0105248_107541172	3300009177	Switchgrass Rhizosphere	MEIRTWEDRRQPSAPRVTIQQGACEHGQCGQFSISISNGERGMTVRFDSEQEFRELLQRGAVEQS*
Ga0126309_112252922	3300010039	Serpentine Soil	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0126380_100950942	3300010043	Tropical Forest Soil	MEIRTWDDQRTPAVPRITMQQGGCDLGQCGQFSISISNGRRGMTVRFDSEAEFREFLERGVAEVSSLASRQ*
Ga0126380_104533283	3300010043	Tropical Forest Soil	MQIRSWEDRRIPAVPRVTLQKGACDIGQCGQFSISISNGQRGMTVRFDSEAEFRDF
Ga0126384_110605812	3300010046	Tropical Forest Soil	MEIRTWDDQRTPAVPRVTMQQGGCDLGQCGQFSISISNGQRGMTVRFDSEAEFREFLERGVAESSSLA*
Ga0126376_114313941	3300010359	Tropical Forest Soil	MEIRTWEDRRTPAVPRVTIQQGACDVGQCGQFSISISNGQRGMTVRFESEAEFREFLERGAVEQL*
Ga0126372_109578912	3300010360	Tropical Forest Soil	MEIRTWEDRRTPAVPRVTIQQGGCDVGQCGQFSISISNGQRGMTVRFASEAEFREFLERGAVEQP*
Ga0126378_131342242	3300010361	Tropical Forest Soil	MEIRTWDDYRTPAVPRVTMQQGGCEIGQCGQFSISISNGQRGMTVRFDSEAEFREFLERGEVEKA*
Ga0126379_101438823	3300010366	Tropical Forest Soil	MEIRTWDDHRDPAVPRVNIQQGSCTVGQCGQFSISISNGQRGMTVRFDSEAEFREFLERGTAEQL*
Ga0126379_103305023	3300010366	Tropical Forest Soil	MEIRMWEDRRTPAVPRVTMQQGGCDVGQCGQFSISISNGQRGMTVRFDSEAEFREFLERGEVEKS*
Ga0126381_1000044453	3300010376	Tropical Forest Soil	MQIRSWEDRRIPAVPRVTLQKGVCDIGQCGQFSISISNGQRGMTVRFDSEAEFRDFLERGIAETSSLA*
Ga0126381_1017573412	3300010376	Tropical Forest Soil	MEIRTWDDHRTPAVPRVTVQQGSCDDGQCGQFSISISNGQRGMTVRFESEAEFRELLERGAVEHS*
Ga0126383_104315231	3300010398	Tropical Forest Soil	LRCRSQGSGMEIRTWDDRRTPAVPRVSIQQGGCDVGHCGQFSISISNGQRGMTVRFDSEAEFREFLERGEVEKS*
Ga0126383_119829423	3300010398	Tropical Forest Soil	MEIRTWEDRRDQAVPRITIQQGGCAVGQCGQFSISISNGRCGMTVRFESEAEFREFLERGEALVSL*
Ga0134122_116449322	3300010400	Terrestrial Soil	MQILTWDDRKNPSQPRAVIQQGRCHEGGCNQFSISISNGERGMTVRFDSEAEFRQFLERGARREA*
Ga0134121_103082083	3300010401	Terrestrial Soil	RRTPARPRVSIQQGSCDLAQCGQFSISISNGERGMTVRFDSEAEFREFLERGRVEQS*
Ga0134121_125506592	3300010401	Terrestrial Soil	MQIHTWDDRKNPSQPRALIQQGRCEEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0134123_100031007	3300010403	Terrestrial Soil	MEIRTWEDRRTPAAPRVTIQQGSCDLAECGQFSISISNGERGMTVRFDSEAEFREFLERGRVEQS*
Ga0105246_118780992	3300011119	Miscanthus Rhizosphere	MWDDRRHPRLPRAVIQQGRCDAGHCGQFSISISNGERGMTVRFDSEDEFRTFIDRGAVEQR*
Ga0137389_111654611	3300012096	Vadose Zone Soil	MDIRIWNDRRDPAIPRVSIQQGSCELGQCGQFSISISNGKRGMTVRFDSEREFRELLQRGTVEKS*
Ga0150985_1107995613	3300012212	Avena Fatua Rhizosphere	QILTWDDRKNRSQPRALIQQGCCDEGECNQFSISISDGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0150985_1116692972	3300012212	Avena Fatua Rhizosphere	MEIRTWDDHRSPAMPRVTIQQGSCQIGQCGQFSISISNGQRGMTVRFDCEAEFREFLERGTVEQS*
Ga0137435_12000461	3300012232	Soil	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKH*
Ga0150984_1052407432	3300012469	Avena Fatua Rhizosphere	QILTWDDRNNPSQPRAVIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0150984_1176973933	3300012469	Avena Fatua Rhizosphere	MQIRTWDDHRSPAMPRVTIQQGSCQIGQCGQFSISISNGQRGMTVRFDCEAEFREFLERGTVEQS*
Ga0157309_103049351	3300012895	Soil	RGRTMQILTWDDRKNPSQPRALIQQGRCDQGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKRR*
Ga0157293_101225613	3300012898	Soil	MQILTWDDRKNPSQPRALIQQGRCGEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0137394_111430402	3300012922	Vadose Zone Soil	MQILTWDDRTNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0137410_118618212	3300012944	Vadose Zone Soil	MQILTWDDRKNPSQPRAVIQKGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0164299_105503052	3300012958	Soil	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEVEFRNFLERGAAEKR*
Ga0164301_110705552	3300012960	Soil	MQILTWDDRKNPSQPRALIQQGRCNEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0126369_100087906	3300012971	Tropical Forest Soil	MEIRTWDDHRDPAVPRVNIQQGSCAVGQCGQFSISISNGQRGMTVRFDSEAEFREFLERGTVEQL*
Ga0126369_119525042	3300012971	Tropical Forest Soil	MEIRTWDDRRTPPVPRVTMQQGGCEVGQCGQFSISISNGQRGMTVRFDSEAEFREFLERGIAEASSLA*
Ga0157374_114695962	3300013296	Miscanthus Rhizosphere	MQILTWHDRKNPSQPRALIKQGRCDDGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0163162_124730941	3300013306	Switchgrass Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCEEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0157375_106629153	3300013308	Miscanthus Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAARSVDACPI*
Ga0163163_108791412	3300014325	Switchgrass Rhizosphere	MQILTWDDRKHPSRPRALIQRGRCDEGQCNQFSISISNGERGMTVRFDSEAEFRLFLEHGAAEKR*
Ga0163163_111357672	3300014325	Switchgrass Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGTAEKR*
Ga0163163_112032192	3300014325	Switchgrass Rhizosphere	MEILTWDDRKNPSQPRAIIQQGRCDEGQCNQFSISISNGERGMTVRFDSETEFRDFLESGALEKR*
Ga0173478_103695411	3300015201	Soil	MQILTWDDRKNPSQPRALIQQGRCDEGECHQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0132257_1000179091	3300015373	Arabidopsis Rhizosphere	MQILTWDDRKHPSRPRALIQQGRCDEGQCNQFSISISNGERGMRARFDSEAEFRLFLEHGAAEKR*
Ga0132257_1039940281	3300015373	Arabidopsis Rhizosphere	MQILTCDDRKNASKPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR*
Ga0182032_105698412	3300016357	Soil	MEIRTWEDRRDQAVPRITIQQGGCEVGQCGQFSISISNGRCGMTVRFESEAEFREFLERGEALVNL
Ga0190266_112020251	3300017965	Soil	WDDRKNPSQPRALIQQGRCDEGECNQFSISISNGECGMTVRFDSEAEFRNFLERGAAEKR
Ga0184604_102823372	3300018000	Groundwater Sediment	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFCNFLERGAVEKR
Ga0184620_101513682	3300018051	Groundwater Sediment	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0190265_119649551	3300018422	Soil	MQILTWDDRKNPSRPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0190275_130257512	3300018432	Soil	MKILMWDDRRHPRLPRAVIQQGRCDAGHCGQFSISISNGERGMTVRFDSEDEFRTFIDRGTVEQR
Ga0190270_112434462	3300018469	Soil	MQILTWDDRKNPSQPRALVQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0190274_123017283	3300018476	Soil	ADRKNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0190271_100653906	3300018481	Soil	MQILTWDDRKNPSQPRALIQQGRCDGGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0190271_123681063	3300018481	Soil	LFPRGRTMQILTWADRTNPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0066669_101706753	3300018482	Grasslands Soil	MEIRTWEDRRMPAVPRVAIQQGGCDVGQCRQFSISISNGQRGMTVRFESEAEFREFLERGAVEHP
Ga0190273_107485292	3300018920	Soil	MQILTWDDRKNPSQPRALIQQGRCDEGACNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0190264_111314332	3300019377	Soil	MQILTWDDRKNPSQPRALIQQGRCDEGQCNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0193752_12453593	3300020027	Soil	GMDILTWQHRRNPNMPRAVIQQGPCDQNQCGQFSTSISNDERRMTVRFESEAEFRQFLEPRQSEKR
Ga0210403_111674792	3300020580	Soil	MQILTWDDRKNPSQPRALIQQGRCDEGECNQFSISISNGERGLTVRFDSEAEFRKFLERGAAEKR
Ga0222622_106405832	3300022756	Groundwater Sediment	PSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0207645_101215533	3300025907	Miscanthus Rhizosphere	CFLFAYRSTLFRTGGTMQILTWDDRKHPSRPRALIQQGRCDEGQCNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0207646_109183981	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEIYVWEDRHARRQPRALMQRGRCAENHCGQFSISISDGERGMTVRFASEQEFREFLERGSVEQAS
Ga0207711_103084312	3300025941	Switchgrass Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDEGECYQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0207711_107929201	3300025941	Switchgrass Rhizosphere	MEIRTWEDRRRQPSAPRVTIQQDACEHGQCGQFSISISNGERGMTVRFDSEQEFRELLQRGAVEQS
Ga0207677_108950172	3300026023	Miscanthus Rhizosphere	MEIRTWEDHRRVPRITLQQGSCDVGQCGQFSISISNGQRGMTVRFGSQAEFREFLERGAVEKL
Ga0207703_101005013	3300026035	Switchgrass Rhizosphere	MEIRTWEDRRQPSAPRVTIQQGACEHGQCGQLSISISNGERGMTVRFDSEQEFRELLQRGAVEQS
Ga0207674_106655101	3300026116	Corn Rhizosphere	MEIFVWDDRRDPNVPRAMIQRGRCADGQCGQFSISISNGERGMTARFESEDEFRQFLERGAVERR
Ga0207675_1008153193	3300026118	Switchgrass Rhizosphere	MQILTWDDRKNPSQPRALIQQGRCDDGECNQFSISISNGERGMTVRFDSETEFRNFLERGAAEKR
Ga0209811_100098422	3300027821	Surface Soil	MEIRTWEDRRTPPVPRVTIQQGGCDVGQCRQFSISISNGQRGMTVRFESEAEFREFLERGAVEHS
Ga0209465_101597294	3300027874	Tropical Forest Soil	MEIRTWEDRRDQAVPRITIQQGSCEVGQCGQFSISISNGRCGLTVRFESEAEFREFLERGEALVSL
Ga0207428_103518573	3300027907	Populus Rhizosphere	DSGAVKRGMEIFGWPDRRAPNVPRAIIQQGRCAQNQCGQFSISINSGERGMTIRFESEAEFREFLEHGAVEKR
Ga0170819_123030022	3300031469	Forest Soil	MQILTWDDRKSPSQPRALIQQGRCDEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0310900_110243482	3300031908	Soil	MQILTWDDRKNPSQPRALIQQGRCDEDEGNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0310897_106890651	3300032003	Soil	RSTLFSRGRTMQILTWDDRKNPSQPRALIQQGRCEEGECNQFSISISNGERGMTVRFDSEAEFRNFLERGAAEKR
Ga0308173_108721991	3300032074	Soil	MEIRTWDDRRSPAIPRVTIQQGSCQIGQCGQFSISISNGQRGMTVRFDCEAEFREFL
Ga0308173_118054072	3300032074	Soil	MEIRTWDDHRSPAMPRVTIQQGSCQIGQCGQFSISISNGQRGMTVRFDCEAEFREFLERGTVEQS
Ga0315912_1000023958	3300032157	Soil	MEIFDWQDRRDLNVPRAIIQQGRCEQNQCGQFSISISNGQRGMTIRFESEAEFRQFLERGEAEKR
Ga0315912_103704862	3300032157	Soil	MEIFDWQDRRDPNVPRALIQQGRCEQNQCGQFSISISNGQRGMTIRFESEAEFRQFLERGEAVKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075051

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences