Metagenome / Metatranscriptome Family F075044

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	55 residues
Representative Sequence	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDRDDREHRR
Number of Associated Samples	54
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.03 %
% of genes near scaffold ends (potentially truncated)	26.89 %
% of genes from short scaffolds (< 2000 bps)	86.55 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.790 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (24.370 % of family members)
Environment Ontology (ENVO)	Unclassified (25.210 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (38.655 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.25% β-sheet: 0.00% Coil/Unstructured: 79.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF04972	BON	26.27
PF06103	DUF948	8.47
PF12732	YtxH	7.63
PF04773	FecR	4.24
PF06305	LapA_dom	3.39
PF13091	PLDc_2	3.39
PF00202	Aminotran_3	0.85
PF11752	DUF3309	0.85
PF09912	DUF2141	0.85
PF11295	DUF3096	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG4768	Uncharacterized conserved protein YoxC, contains an MCP-like domain	Function unknown [S]	8.47
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	3.39

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.63 %
Unclassified	root	N/A	24.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.79 %
Unclassified	root	N/A	24.37 %
Viruses	superkingdom	All Organisms → Viruses	0.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.79 %
Unclassified	root	N/A	24.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.59 %
Unclassified	root	N/A	24.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	62.18 %
Unclassified	root	N/A	24.37 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	62.18 %
Unclassified	root	N/A	24.37 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	24.37 %
Unclassified	root	N/A	24.37 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	12.61 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	4.20 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.37 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	17.65 %
Deltaproteobacteria bacterium CG1_02_45_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	7.56 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	3.36 %
unclassified Syntrophobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales	2.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.52 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	2.52 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.84 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.37 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	15.13 %
Deltaproteobacteria bacterium CG1_02_45_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	7.56 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	3.36 %
unclassified Syntrophaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae	2.52 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	2.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.52 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	2.52 %
Candidatus Electronema	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electronema	0.84 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.37 %
unclassified Syntrophus (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria)	15.13 %
Deltaproteobacteria bacterium CG1_02_45_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	7.56 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	3.36 %
Syntrophaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2.52 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	2.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.52 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	2.52 %
unclassified Candidatus Electronema	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electronema → unclassified Candidatus Electronema	0.84 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.37 %
Syntrophus sp. (in: d-proteobacteria)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	15.13 %
Deltaproteobacteria bacterium CG1_02_45_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	7.56 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	3.36 %
Syntrophaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	2.52 %
Syntrophobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	2.52 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.52 %
Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	2.52 %
Candidatus Electronema sp. GS	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electronema → unclassified Candidatus Electronema → Candidatus Electronema sp. GS	0.84 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_105987577	Not Available	767	Open in IMG/M
3300004481\|Ga0069718_16279552	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300006224\|Ga0079037_100468694	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300006224\|Ga0079037_100621357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1049	Open in IMG/M
3300006224\|Ga0079037_100723295	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	973	Open in IMG/M
3300006224\|Ga0079037_101726483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	625	Open in IMG/M
3300006930\|Ga0079303_10054118	All Organisms → cellular organisms → Bacteria → Proteobacteria	1428	Open in IMG/M
3300009037\|Ga0105093_10042915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	2017	Open in IMG/M
3300009053\|Ga0105095_10268633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
3300009078\|Ga0105106_10692721	Not Available	728	Open in IMG/M
3300009082\|Ga0105099_10175842	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300009082\|Ga0105099_10326288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	904	Open in IMG/M
3300009091\|Ga0102851_10689754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1079	Open in IMG/M
3300009091\|Ga0102851_12406630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	602	Open in IMG/M
3300009091\|Ga0102851_13330186	Not Available	516	Open in IMG/M
3300009111\|Ga0115026_10985006	Not Available	673	Open in IMG/M
3300009119\|Ga0117938_102193	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300009153\|Ga0105094_10589548	Not Available	649	Open in IMG/M
3300009166\|Ga0105100_10208178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	1166	Open in IMG/M
3300009166\|Ga0105100_10372687	Not Available	861	Open in IMG/M
3300009167\|Ga0113563_12742095	Not Available	596	Open in IMG/M
3300009179\|Ga0115028_11192346	Not Available	626	Open in IMG/M
3300012931\|Ga0153915_10456505	Not Available	1455	Open in IMG/M
3300012931\|Ga0153915_10536930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	1340	Open in IMG/M
3300012931\|Ga0153915_10976441	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300012931\|Ga0153915_11067032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	942	Open in IMG/M
3300012931\|Ga0153915_11312921	Not Available	845	Open in IMG/M
3300012931\|Ga0153915_12591050	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300012931\|Ga0153915_12659141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	585	Open in IMG/M
3300012931\|Ga0153915_12690870	Not Available	581	Open in IMG/M
3300012931\|Ga0153915_13381071	Not Available	517	Open in IMG/M
3300012964\|Ga0153916_10763458	Not Available	1047	Open in IMG/M
3300012964\|Ga0153916_11168703	Not Available	848	Open in IMG/M
3300012964\|Ga0153916_13247573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	511	Open in IMG/M
3300013078\|Ga0153914_1027586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1114	Open in IMG/M
3300013078\|Ga0153914_1027791	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300013078\|Ga0153914_1201836	Not Available	929	Open in IMG/M
3300013080\|Ga0153913_1502236	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300018055\|Ga0184616_10201170	Not Available	747	Open in IMG/M
3300020048\|Ga0207193_1810845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	583	Open in IMG/M
3300021090\|Ga0210377_10765612	Not Available	525	Open in IMG/M
3300022185\|Ga0079039_1049483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	681	Open in IMG/M
3300022185\|Ga0079039_1263144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	983	Open in IMG/M
3300022185\|Ga0079039_1497427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	685	Open in IMG/M
3300027713\|Ga0209286_1004758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	4603	Open in IMG/M
3300027713\|Ga0209286_1009482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3433	Open in IMG/M
3300027731\|Ga0209592_1103793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	1037	Open in IMG/M
3300027740\|Ga0214474_1008878	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4096	Open in IMG/M
3300027740\|Ga0214474_1008878	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4096	Open in IMG/M
3300027740\|Ga0214474_1070397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium	1336	Open in IMG/M
3300027740\|Ga0214474_1087983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1177	Open in IMG/M
3300027811\|Ga0256868_10123246	All Organisms → Viruses → Predicted Viral	1141	Open in IMG/M
3300027811\|Ga0256868_10269742	Not Available	708	Open in IMG/M
3300027811\|Ga0256868_10312302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	647	Open in IMG/M
3300027811\|Ga0256868_10340736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	612	Open in IMG/M
3300027818\|Ga0209706_10354917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300027871\|Ga0209397_10227994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	868	Open in IMG/M
3300027877\|Ga0209293_10182409	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1020	Open in IMG/M
3300027877\|Ga0209293_10197398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	985	Open in IMG/M
3300027900\|Ga0209253_10047479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3568	Open in IMG/M
3300027900\|Ga0209253_10240502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1429	Open in IMG/M
3300027900\|Ga0209253_10417326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1016	Open in IMG/M
3300027979\|Ga0209705_10019209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3759	Open in IMG/M
3300030613\|Ga0299915_10047233	All Organisms → cellular organisms → Bacteria	3204	Open in IMG/M
3300030613\|Ga0299915_10097641	All Organisms → cellular organisms → Bacteria → Proteobacteria	2141	Open in IMG/M
3300030613\|Ga0299915_10443551	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	862	Open in IMG/M
3300030613\|Ga0299915_10488185	Not Available	810	Open in IMG/M
3300031707\|Ga0315291_10716425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electronema → unclassified Candidatus Electronema → Candidatus Electronema sp. GS	886	Open in IMG/M
3300031949\|Ga0214473_10041911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5365	Open in IMG/M
3300031949\|Ga0214473_10127823	Not Available	2964	Open in IMG/M
3300031949\|Ga0214473_10553798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1275	Open in IMG/M
3300031949\|Ga0214473_10654160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	1152	Open in IMG/M
3300031949\|Ga0214473_12385988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	504	Open in IMG/M
3300032020\|Ga0315296_10173093	Not Available	1312	Open in IMG/M
3300032069\|Ga0315282_10054689	All Organisms → cellular organisms → Bacteria → Proteobacteria	4250	Open in IMG/M
3300032069\|Ga0315282_10105638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2463	Open in IMG/M
3300032069\|Ga0315282_10141431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1933	Open in IMG/M
3300032156\|Ga0315295_11981557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	547	Open in IMG/M
3300033406\|Ga0316604_10640055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	585	Open in IMG/M
3300033414\|Ga0316619_10753623	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300033414\|Ga0316619_10766433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	821	Open in IMG/M
3300033414\|Ga0316619_11043739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	714	Open in IMG/M
3300033416\|Ga0316622_102009800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	671	Open in IMG/M
3300033416\|Ga0316622_102570395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	586	Open in IMG/M
3300033418\|Ga0316625_100970043	Not Available	753	Open in IMG/M
3300033433\|Ga0326726_10346851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1400	Open in IMG/M
3300033433\|Ga0326726_10373869	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	1348	Open in IMG/M
3300033433\|Ga0326726_10507959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1153	Open in IMG/M
3300033480\|Ga0316620_10411453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1225	Open in IMG/M
3300033480\|Ga0316620_11679849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	629	Open in IMG/M
3300033480\|Ga0316620_12301093	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300033480\|Ga0316620_12399607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_19FT_COMBO_52_11	524	Open in IMG/M
3300033482\|Ga0316627_100425032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1151	Open in IMG/M
3300033482\|Ga0316627_101335322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	717	Open in IMG/M
3300033485\|Ga0316626_10153765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1762	Open in IMG/M
3300033485\|Ga0316626_12016312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	523	Open in IMG/M
3300033486\|Ga0316624_10137029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium	1801	Open in IMG/M
3300033486\|Ga0316624_10633702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	933	Open in IMG/M
3300033486\|Ga0316624_11184445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	694	Open in IMG/M
3300033486\|Ga0316624_11972167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	541	Open in IMG/M
3300033487\|Ga0316630_11976924	Not Available	535	Open in IMG/M
3300033489\|Ga0299912_10633309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	840	Open in IMG/M
3300033489\|Ga0299912_10690387	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	794	Open in IMG/M
3300033489\|Ga0299912_10886622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	674	Open in IMG/M
3300033489\|Ga0299912_10888389	Not Available	673	Open in IMG/M
3300033489\|Ga0299912_10932360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	652	Open in IMG/M
3300033489\|Ga0299912_11019966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	615	Open in IMG/M
3300033493\|Ga0316631_10109310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	987	Open in IMG/M
3300033493\|Ga0316631_10342491	Not Available	607	Open in IMG/M
3300033513\|Ga0316628_100339372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1885	Open in IMG/M
3300033513\|Ga0316628_101486282	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	902	Open in IMG/M
3300033513\|Ga0316628_101718481	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	835	Open in IMG/M
3300033513\|Ga0316628_101884015	Not Available	795	Open in IMG/M
3300033513\|Ga0316628_102484587	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	684	Open in IMG/M
3300033521\|Ga0316616_103045628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. (in: d-proteobacteria)	631	Open in IMG/M
3300034083\|Ga0373901_101126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG1_02_45_11	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Engineered	Engineered	0.84%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	51.26%
Terrestrial	Environmental → Terrestrial	47.90%
Bioremediation	Engineered → Bioremediation	0.84%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.74%
Soil	Environmental → Terrestrial → Soil	44.54%
Peat	Environmental → Terrestrial → Peat	2.52%
Sediment	Environmental → Aquatic → Sediment	1.68%
Marine	Environmental → Aquatic → Marine	0.84%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.84%
Metal	Engineered → Bioremediation → Metal	0.84%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	16.81%
Lake	Environmental → Aquatic → Freshwater → Lake	5.88%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.84%
Loam	Environmental → Terrestrial → Soil → Loam	0.84%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.84%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	24.37%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	23.53%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	16.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	12.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.88%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.68%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.84%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.84%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	24.37%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	12.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	12.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	10.92%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.04%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.20%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.84%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.84%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.84%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.84%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.84%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.84%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009119	Lake sediment microbial communities from Leach Lake, MN	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013078	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013080	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027740	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034083	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1059875773	3300001213	Wetland	MKKVLVIVMLIIATGLVGCPRRYYDRDRHDHDRGRYEQDRGHDYEHRDRDNDDREYRR*
Ga0069718_162795521	3300004481	Sediment	MKKVLLIVMLIIAMGLVGCPPRYYDRDRHGQDRGHDREHHDRDRGDREHRR*
Ga0079037_1004686941	3300006224	Freshwater Wetlands	MKKIALMILLLVLASGLVGCPRRSYDRDRHDQDRSHDYEQRDRDNGDREHRR*
Ga0079037_1006213571	3300006224	Freshwater Wetlands	RKEVLQMKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRYQR*
Ga0079037_1007232953	3300006224	Freshwater Wetlands	MKKVLVIVTLIIAMGLVGCPRRYYDRDRHDHDRGRYEQDRGHDYEHRDRDRDDREHRK*
Ga0079037_1017264831	3300006224	Freshwater Wetlands	MKKVLVIVVLIIAMGLVGCPRRYYDRDRHDHDRGRDYEHRDRYNDDRGYRR*
Ga0079303_100541182	3300006930	Deep Subsurface	MKKALVIVVLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDNDDRGYRR*
Ga0105093_100429153	3300009037	Freshwater Sediment	MKKVLLIVMLIIAMGLVGCPPRYYDRDRHDHDRGHDYEHRDRDRDDRGHRK*
Ga0105095_102686331	3300009053	Freshwater Sediment	MKKVLLIVMLIIAMGLVGCPPRYYDRDRHDRDRGHDYEHRDRDRDDRGHRK*
Ga0105106_106927211	3300009078	Freshwater Sediment	MKKILVIVMLIIAIGLVGCPRRHYDRDRHDKDRGHDYEHRDRDRDDREHRR*
Ga0105099_101758423	3300009082	Freshwater Sediment	MRWGYRKPEVLSVSQLKPGKEEVLQMNKVLVIVMLIIAIGLVGCPRRHYDRHDKDRGHDYEHRDRDRDNRGHRK*
Ga0105099_103262883	3300009082	Freshwater Sediment	MKKVLLIVMLIIAMGLVGCPPRYYDRDRHDRDRGHDYEHRDRDNQDYGDYR*
Ga0102851_106897542	3300009091	Freshwater Wetlands	MKKALVIVVLIIAMGLVGCPRRYYDRDRNDHDRGHDYEHRDRYNDDRGYRR*
Ga0102851_124066302	3300009091	Freshwater Wetlands	MKKVLVIVTLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDRDDREHRR*
Ga0102851_133301861	3300009091	Freshwater Wetlands	MKKALVIVVLIIAMGLVGCPRRYYDRDRHDHDRGRDYEHRDRYNDDRGYRR*
Ga0115026_109850063	3300009111	Wetland	VLSVSEIKAGRKEVLQMKKVLVIVMLIIAMGLVGCLPFYYDRDRHDQDRSHDYGHHDRDNDDREHRE*
Ga0117938_1021932	3300009119	Lake Sediment	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDRDDREHLR*
Ga0105094_105895481	3300009153	Freshwater Sediment	MRWGYRKPEVLSVSQLKPGKEEVLQMNKVLVIVMLIIAIGLVGCPRRHYDRHDKDRGHDYEHRDRDRDDREHRR*
Ga0105100_102081781	3300009166	Freshwater Sediment	LKVGRKEVLQMKKVLLIVMLIIAMGLVGCPPRYYDRDRHDRDRGHDYEHRDRDRDDRGHRK*
Ga0105100_103726872	3300009166	Freshwater Sediment	MKKILVIVMLIIAIGLVGCPRRHYDRDRHDKDRGHDYEHRDRDRDDRGHRK*
Ga0113563_127420951	3300009167	Freshwater Wetlands	VLSVSKLKAGRKELLQMKKVLVIVMLIIAMGLVGCPPRYYDRDRHDQDRGNDYEHRDRDRDDREHRK*
Ga0115028_111923461	3300009179	Wetland	MKNVLVIVMLIIAMGLVGCPPRYCDRDDRNHDRGYDYEHHDRDNRGHE
Ga0153915_104565052	3300012931	Freshwater Wetlands	VLSVSESKAVRKEVLQMKKVLLIVTLIIAIGLVGCPRRNYDRDRRDQDRGHDYEHRDRDNDDREHRR*
Ga0153915_105369304	3300012931	Freshwater Wetlands	VLSVLELKAVRKEVLQMKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGRYEQDRGHDYEHRDRNNDDREHRR*
Ga0153915_109764414	3300012931	Freshwater Wetlands	MKKVLLIVMLIIAIGSVGCPRRNYDRDRRDQDRGRYEQDRGHDDEHRDR
Ga0153915_110670321	3300012931	Freshwater Wetlands	MKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDNDDREHRR*
Ga0153915_113129213	3300012931	Freshwater Wetlands	MKKVLVIVMLIIAMGLIGCPPRYYDRDRHDQDRGRDYEHRDRHDQDRGHDY
Ga0153915_122803962	3300012931	Freshwater Wetlands	MLSKNILLKRESLHRTGFPQEVLSVSELKAVRKEVSHMKKVLVIVMLIIAMAMGLVGCPRRSYDRDRHDHDRGHDYEHRDRDNDDREHRR*
Ga0153915_125910501	3300012931	Freshwater Wetlands	MKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDQDRGHDYEHRDRNNDDREHRR*
Ga0153915_126591412	3300012931	Freshwater Wetlands	VLQMKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGRYEQDRGHDYEHRDRDNDDREHRR*
Ga0153915_126908702	3300012931	Freshwater Wetlands	LQMKKVLVIVMLIIAMAMGLVACPRRSYDRDRDHDRGHDYEHRDRDNNDREHRR*
Ga0153915_133810711	3300012931	Freshwater Wetlands	LQMKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGRDYEHRDRDNDDREHRR*
Ga0153916_107634582	3300012964	Freshwater Wetlands	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGRDYEHRDRDNDDREHRR*
Ga0153916_111687031	3300012964	Freshwater Wetlands	KEVLQMKKVLLIVTLIIAIGLVGCPRRNYDRDRRDQDRGHDYEHRDRDNDDREHRR*
Ga0153916_132475732	3300012964	Freshwater Wetlands	LRKEVLQMKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDQDRGHDYEHRDRDNGDREHRR
Ga0153914_10275862	3300013078	Freshwater Wetlands	MKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDQDRGHDYEHRDRDNGDREHRR*
Ga0153914_10277911	3300013078	Freshwater Wetlands	VLSVSELKAIKKEVLQMKKVLLIVMLIVAIGLVGCPRRYYDRDRHDHDRGRDYEHHDRDRGDREHRR*
Ga0153914_12018363	3300013078	Freshwater Wetlands	MKKVLVIVMLIIAMGLVGCPPRYYDRDRHDQDRGHDREHHDRDRGDREHRR*
Ga0153913_15022362	3300013080	Freshwater Wetlands	VLSVSELKVLRKEVLQMKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDQDRGHDYEHRDRDNGDREHRR*
Ga0184616_102011701	3300018055	Groundwater Sediment	MKKVLVIVMLIIAMGLVGCPRRYYDRDSHDHDRGHDYEHRDRDRDDREHRR
Ga0207193_18108452	3300020048	Freshwater Lake Sediment	MKKVLVIVMLIIAMGLVGCPRRYYDRDRNDHDRGHDYEHRDRYN
Ga0210377_107656122	3300021090	Groundwater Sediment	RKEVLQMKNVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGHDTEHRDRDRDDREHRR
Ga0079039_10494832	3300022185	Freshwater Wetlands	MKKIALMILLLVLASGLVGCPRRSYDRDRHDQDRSHDYEQRDRDNGDREHRR
Ga0079039_12631442	3300022185	Freshwater Wetlands	MKKALVIVVLIIAMGLVGCPRRYYDRDRNDHDRGHDYEHRDRYNDDRGYRR
Ga0079039_14974272	3300022185	Freshwater Wetlands	MKKVLVIVVLIIAMGLVGCPRRYYDRDRHDHDRGRDYEHRDRYNDDRGYRR
Ga0209431_107113612	3300025313	Soil	MINYFQARGKEVVGEAIERKEVLQMKKVLVIVMLIIEMGLVGCPRRHYDRDRHDHDRGRDHEQRDRDRDDREHRK
Ga0209286_10047587	3300027713	Freshwater Sediment	MKKILVIVMLIIAIGLVGCPRRHYDRDRHDKDRGHDYEHRDRDRDDREHRR
Ga0209286_10094823	3300027713	Freshwater Sediment	MKKVLLIVMLIIAMGLVGCPPRYYDRDRHDRDRGHDYEHRDRDRDDRGHRK
Ga0209592_11037932	3300027731	Freshwater Sediment	MKKILVIVMLIIAMGLVGCPRRHYDRDRHDKDRGHDYEHRDRDRDDREHRK
Ga0214474_10088782	3300027740	Soil	MKKVLVIVMLIIAMGLVGCPPRYYDRDRHDQDRGHDRGHHDRDRDDREHRR
Ga0214474_10088789	3300027740	Soil	MKKVLLIVMLIVAIGLVGCPRRYYDRDRHDQDRGHDREHHDRDRDDREHRR
Ga0214474_10703973	3300027740	Soil	MKKVLVIVMLIIAMGLVGCPPRYYDRDRHDHDRGHDYEHRDRDRDDREHRK
Ga0214474_10879832	3300027740	Soil	MKKVLLIVILIIAMGLVGCPPRYYDRDRHGQDRGHDREHHDRDRGDREHRR
Ga0256868_101232461	3300027811	Soil	MKKVLVIVMLIIAMGLVGCPRRHYDRDRHDHDRGRDHEQRDRDRDDREHR
Ga0256868_102697421	3300027811	Soil	MKKVLVIVMLIIAMGLVGCPPRYYDRDRHDHDRGHDYEHRDRDRGDREHSR
Ga0256868_103123021	3300027811	Soil	RKPEVLSVSELKVVRKEVLQMKKVLVIVMLIIAMGLVGCPRRHYDRDRHDHDRGRDHEQRDRDRDDREHRR
Ga0256868_103407361	3300027811	Soil	KKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGHDTEHRDRDRDDREHRR
Ga0209706_103549171	3300027818	Freshwater Sediment	MKKVLLIVMLIIAMGLVGCPPRYYDRDRHDRDRGHDYEHRDRDRDDRG
Ga0209397_102279942	3300027871	Wetland	MKKVLVIVTLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDRDDREHRR
Ga0209293_101824094	3300027877	Wetland	MKKVLVIVILIIAMAMGLVGCPRRSYDRDRHDHDRGHDYEHRDRDNDDRGYRR
Ga0209293_101973981	3300027877	Wetland	MKKIALMILLLVLASGLVGCPRRSYDRDRHDHDRGHDYEHRDRDNDDRGYRR
Ga0209253_100474792	3300027900	Freshwater Lake Sediment	MKKILVIVMLIIAMGLVGCPPRHYDRDRHDHDRGRDHEQRDRDRDDREHRR
Ga0209253_102405022	3300027900	Freshwater Lake Sediment	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDRDDREHRR
Ga0209253_104173262	3300027900	Freshwater Lake Sediment	VPSVLELKAVRKEVLQMKKVLVIVMLIIAMAMGLVGCPRRSYDRDCHDQDRGHDYEQRDRDNGDREPRR
Ga0209705_100192098	3300027979	Freshwater Sediment	MKKVLVIVTLIVAMGLVGCPRRYYDRDRHDHDRGRDYEHRDRDRGDREHRR
Ga0299915_100472335	3300030613	Soil	MKKVLLIVMLIIAMGLVGCPPRYYDRDRHGQDRGHDREHHDRDRGDREHRR
Ga0299915_100976412	3300030613	Soil	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGHDTEHRDRDRDDREHRR
Ga0299915_104435513	3300030613	Soil	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDQDRGHDYEHHDRDRDDREHRK
Ga0299915_104881851	3300030613	Soil	PEVLSVSELKAVRKEVLQMKKVLLIVMLIVAIGLVGCPRRYYDRDRHDQDRGHDREHHDRDRDDREHRR
Ga0315291_107164251	3300031707	Sediment	MKKVLVIVMLIIAMGLLGCPPRFYDRDRHDQDRGHDRGHDYEHRGRDNDDREHRR
Ga0214473_100419114	3300031949	Soil	MKKVLVIVMLIIAMGLVGCPRRSYDRDRHDQDRGRDYEHRDRDRDDREHRR
Ga0214473_101278231	3300031949	Soil	LMIAMLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDNDDREHRR
Ga0214473_105537982	3300031949	Soil	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGHDHEQRDRDRDDREHRR
Ga0214473_106541602	3300031949	Soil	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDRDNREHRR
Ga0214473_123859882	3300031949	Soil	MKKVLVIVMLIVAMGLVGCPRRHYDRDRYDQDRGRHQQDRGHDYEHRDRDGGDREHRR
Ga0315296_101730934	3300032020	Sediment	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDQDRGHDYEHRDRDRDDREHRK
Ga0315282_100546897	3300032069	Sediment	MKKVLVIVMLIIAMGLVGCPPRYYDRDRHDQDRGHDYEHRDRDRDDREHRK
Ga0315282_101056382	3300032069	Sediment	ELKAVRKEVLQMKKVLVIVMLIIAMGLVGCPRRYYDRDRHDQDRGHDYEHRDRDTDDREHRR
Ga0315282_101414315	3300032069	Sediment	LSVSELKAVRKEVLQMKKVLVIVMLIIAMGLVGCPRRYYDRDPHDHDRGHDYEHRDRDTDDREHRR
Ga0315295_119815572	3300032156	Sediment	MKKVFLILMLIIAMGLVGCPRRYYDGDRHDHDRGRDYEHRDRDRSDRQYRR
Ga0316604_106400551	3300033406	Soil	MKKVLVIVILIIAMAMGLVGCPRRSYDRDRHDHDRGHDYEHRDRDNDDRGYPR
Ga0316619_107536232	3300033414	Soil	MKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRYQR
Ga0316619_107664332	3300033414	Soil	MKKVLVIVMLIIAMGFVGCPRRYYDRDHHDHDRGRYEQDRGHDYEHRDRDRDDRENRR
Ga0316619_110437391	3300033414	Soil	VEGRTEVLQMKKVLVVVTLIIAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDRDDREHRR
Ga0316622_1020098001	3300033416	Soil	MKKVLVIVMLIIAMAMGLVGCPRRSYDRDRHDHDRGHDYEHRDRDNDDRGYRR
Ga0316622_1025703951	3300033416	Soil	KEVLQMKKALVIVVLIIAMGLVGCPRRYYDRDRHDHDRGRDYEHRDRYNDDRGYRR
Ga0316625_1009700432	3300033418	Soil	MKKVLVIVILIIAMGLVGCPRRYYDRDRHDHDRGHEHRDRDYDGCEHRK
Ga0326726_103468513	3300033433	Peat Soil	MKKVLLIVMLIIAMGLVGCPRRNYDRDRRDQDRGRHDQDRGHDD
Ga0326726_103738693	3300033433	Peat Soil	MKKVFVIVMLIIAMGLVACPRRHYDRGRHDQDRGRDYEHRDRDNDDREHRR
Ga0326726_105079592	3300033433	Peat Soil	MKRVLVIGMLIIAMAMGLVGCPRRSYDRDRHDHDRGHDYEHRDRDNDDREHRR
Ga0316620_104114532	3300033480	Soil	MKKALVIVMLIIAIGLVGCPRRYYDRDDRGYGRGRYEQDRDRRDQDRGHDYEHHERDNDDREHRR
Ga0316620_116798491	3300033480	Soil	MKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDQDRGHDYEHRDRNNDDREHRR
Ga0316620_123010932	3300033480	Soil	MKKVLLIVMLIIAIGSVGCPRRNYDRDRRDQDRGRHDQDRGHDDEHRDR
Ga0316620_123996071	3300033480	Soil	MKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDNDDREHRR
Ga0316627_1004250322	3300033482	Soil	MKKVLVIVVLIIAMGLVGCPRRYYDRDRNDHDRGHDYEHRDRYNDDRGYRR
Ga0316627_1013353222	3300033482	Soil	MKKVLVIVTLIIAMGLVGCPRRYYDRDRHDHDRGRYEQDRGHDYEHRDRDRDDREHRK
Ga0316626_101537652	3300033485	Soil	VLSVSGLKAVRKEVLQMKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRYQR
Ga0316626_120163122	3300033485	Soil	IAMAMGLVGCPRRTYDRDRHDHDRGRDYEHRDRGYDDREHRR
Ga0316624_101370292	3300033486	Soil	MKKIVLMILLLVLASGLVGCPRRSYDRDRHDQGRGHDYEHRDHDNDDREHSR
Ga0316624_106337022	3300033486	Soil	MKKVLVIVTLIVAMGLVGCPRRYYDRDRRDQDRGHDYEHRDRDNHDREQDREHRR
Ga0316624_111844451	3300033486	Soil	MKKALVIVMLIIAMGLVGCPPRYYDRDRHDHDRGHDYEHRDRDNDDREHRR
Ga0316624_112134222	3300033486	Soil	MKKVLLIVMLIVAIGLVGCPRRYYDRDRHDQDRGRHQQDPGHDREH
Ga0316624_119721672	3300033486	Soil	MKKVLVIVMLIIAMGLVGCPRRYYDRDRHDQDRGHDYEQRDRRD
Ga0316630_119769241	3300033487	Soil	MKKVFVIVVLIIAMGLVGCPRRYYDRDRHDHDRGRDYEHRDRYNDDRGYRR
Ga0299912_106333092	3300033489	Soil	MKRVLLIVMLIVAIGLVGCPFIRGHNSDRGRHDQDRGHDYEHRDRDNDDREHSR
Ga0299912_106903872	3300033489	Soil	LQMKKVLVIVMLIIAMGLVGCPRRYYDRDRHDHDRGRDHEHRDRDRGDREHRR
Ga0299912_108866222	3300033489	Soil	MKKVLVIVMLIIAMGLVGCPPRYYDRDRHDQDRGHDYEHRDRDRDNREHRK
Ga0299912_108883891	3300033489	Soil	MKKVLVIVMLIIAIGLVGCPRRYYDRDRHDHDRGHDYEHRDRDNDDREHRR
Ga0299912_109323602	3300033489	Soil	VLSVSELKAGRKEVLQMKKVLLIVILIIAMGLVGCPPRYYDRDRHGQDRGHDREHHDRDRGDREHRR
Ga0299912_110199661	3300033489	Soil	VLSVSELKAVRKEVLQMKKVLLIVMLIVAIGLVGCPRRYYDRDRHDQDRGHDREHHDRDRDDREHRR
Ga0316631_101093102	3300033493	Soil	MKKVLVIVILIIAMGWVGCPRRYYDGDRHDHDRGRYEQDRGHDYEHRDRDRDDREYRK
Ga0316631_103424911	3300033493	Soil	RTGFAQEVLSVSELKAVWKEMLQMKKVLVIVMLIIAMGLVGCPRRSYDRDRHDHDRGHDYEHRDRDNDDRGYRR
Ga0316628_1003393725	3300033513	Soil	MKKVLLIVMLIIAMGLVGCPRRSYDRDRHDHDRGHDYEHRDRDNDDREHRR
Ga0316628_1014862823	3300033513	Soil	MKKVLVIVMLIIAMAMGLVGCPRRYYDRDRHDHDRGHDYEHRDRDNDD
Ga0316628_1017184812	3300033513	Soil	MNPTLAGGKEVLQMKKVLVVAMLIIAIGLVGCPRRYYDRDRHDHDRGRYEQDRGHDYEHRDRDRDNREHRK
Ga0316628_1018840151	3300033513	Soil	MKNVWVIVMLIIVMGLVGCPHRYYDRDDRNLDRGNDYERHDRNNRGHEQDHEQSR
Ga0316628_1024845872	3300033513	Soil	MKKVLVIVMLITAMAMGLVACPRRSYDRDRDHDRGHDYEHRDRDNNDHEHRR
Ga0316616_1030456281	3300033521	Soil	LLLVLASGLVGCPRRSYDRDRHDQDRSHDYEQRDRDNGDREHRR
Ga0373901_101126_357_560	3300034083	Sediment Slurry	VLSVSESKAVRKEVLQMKKVLLIVTLIIAIGLVGCPRRNYDRDRRDQDRGHDYEHRDRDNDDREHRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences