Metagenome / Metatranscriptome Family F074958

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074958
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	73 residues
Representative Sequence	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIAAAASPAKTYSSTQQSNEPVIAADTGKAARVWP
Number of Associated Samples	65
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.19 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (59.664 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (35.294 % of family members)
Environment Ontology (ENVO)	Unclassified (56.303 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.185 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.43% β-sheet: 0.00% Coil/Unstructured: 71.57%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13185	GAF_2	21.01
PF00149	Metallophos	10.92
PF03575	Peptidase_S51	2.52
PF07228	SpoIIE	2.52
PF15902	Sortilin-Vps10	2.52
PF04519	Bactofilin	2.52
PF02518	HATPase_c	1.68
PF12161	HsdM_N	0.84
PF00664	ABC_membrane	0.84
PF02782	FGGY_C	0.84
PF00486	Trans_reg_C	0.84
PF03600	CitMHS	0.84
PF01740	STAS	0.84
PF02653	BPD_transp_2	0.84
PF01243	Putative_PNPOx	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	2.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.66 %
Unclassified	root	N/A	40.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.66 %
Unclassified	root	N/A	40.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.66 %
Unclassified	root	N/A	40.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.29 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.08 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.08 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.84 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.08 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.84 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.56 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.84 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.56 %
Bacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus	0.84 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	2.52 %
Bacillus cereus group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group	0.84 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	2.52 %
Bacillus cereus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group → Bacillus cereus	0.84 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10122885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300001356\|JGI12269J14319_10077570	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300001356\|JGI12269J14319_10115752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300004080\|Ga0062385_10381730	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300004091\|Ga0062387_100556469	Not Available	813	Open in IMG/M
3300004152\|Ga0062386_101212640	Not Available	627	Open in IMG/M
3300004468\|Ga0068977_1267664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group → Bacillus cereus	512	Open in IMG/M
3300004470\|Ga0068967_1275293	Not Available	526	Open in IMG/M
3300006354\|Ga0075021_10065776	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300009700\|Ga0116217_10049000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3073	Open in IMG/M
3300009824\|Ga0116219_10221317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300009824\|Ga0116219_10285779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300010343\|Ga0074044_10017450	All Organisms → cellular organisms → Bacteria	5255	Open in IMG/M
3300010360\|Ga0126372_12998903	Not Available	524	Open in IMG/M
3300010379\|Ga0136449_100090127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6386	Open in IMG/M
3300010379\|Ga0136449_100446653	All Organisms → cellular organisms → Bacteria → Proteobacteria	2270	Open in IMG/M
3300011082\|Ga0138526_1057417	Not Available	635	Open in IMG/M
3300012931\|Ga0153915_10197109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	2208	Open in IMG/M
3300017821\|Ga0187812_1037542	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300017821\|Ga0187812_1209586	Not Available	622	Open in IMG/M
3300017821\|Ga0187812_1268860	Not Available	543	Open in IMG/M
3300017823\|Ga0187818_10091082	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300017823\|Ga0187818_10132145	Not Available	1084	Open in IMG/M
3300017823\|Ga0187818_10205480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300017823\|Ga0187818_10346602	Not Available	655	Open in IMG/M
3300017823\|Ga0187818_10352208	Not Available	650	Open in IMG/M
3300017823\|Ga0187818_10467310	Not Available	564	Open in IMG/M
3300017823\|Ga0187818_10588803	Not Available	502	Open in IMG/M
3300017924\|Ga0187820_1109162	Not Available	802	Open in IMG/M
3300017928\|Ga0187806_1016749	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300017928\|Ga0187806_1156528	Not Available	755	Open in IMG/M
3300017932\|Ga0187814_10230664	Not Available	699	Open in IMG/M
3300017932\|Ga0187814_10399987	Not Available	535	Open in IMG/M
3300017934\|Ga0187803_10013808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	3228	Open in IMG/M
3300017934\|Ga0187803_10277364	Not Available	667	Open in IMG/M
3300017939\|Ga0187775_10007173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2745	Open in IMG/M
3300017939\|Ga0187775_10019579	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300017939\|Ga0187775_10102671	Not Available	963	Open in IMG/M
3300017942\|Ga0187808_10037761	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300017942\|Ga0187808_10063105	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300017943\|Ga0187819_10126479	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300017955\|Ga0187817_10105750	Not Available	1773	Open in IMG/M
3300017955\|Ga0187817_10436739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300017959\|Ga0187779_10019349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3880	Open in IMG/M
3300017959\|Ga0187779_10453297	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300017961\|Ga0187778_10004649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9041	Open in IMG/M
3300017961\|Ga0187778_10004798	All Organisms → cellular organisms → Bacteria	8852	Open in IMG/M
3300017961\|Ga0187778_10596733	Not Available	740	Open in IMG/M
3300017966\|Ga0187776_10046087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2469	Open in IMG/M
3300017966\|Ga0187776_10061866	All Organisms → cellular organisms → Bacteria → Acidobacteria	2151	Open in IMG/M
3300017966\|Ga0187776_10168259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1359	Open in IMG/M
3300017970\|Ga0187783_10251515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292	Open in IMG/M
3300017970\|Ga0187783_11253951	Not Available	534	Open in IMG/M
3300017972\|Ga0187781_10172359	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300017972\|Ga0187781_10176318	All Organisms → cellular organisms → Bacteria → Acidobacteria	1505	Open in IMG/M
3300017972\|Ga0187781_11471493	Not Available	505	Open in IMG/M
3300017973\|Ga0187780_10027790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4003	Open in IMG/M
3300017973\|Ga0187780_10173428	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300017975\|Ga0187782_10060962	All Organisms → cellular organisms → Bacteria → Proteobacteria	2747	Open in IMG/M
3300017975\|Ga0187782_10899768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300017999\|Ga0187767_10025230	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300018001\|Ga0187815_10536418	Not Available	502	Open in IMG/M
3300018006\|Ga0187804_10172737	Not Available	917	Open in IMG/M
3300018006\|Ga0187804_10496699	Not Available	548	Open in IMG/M
3300018007\|Ga0187805_10027216	All Organisms → cellular organisms → Bacteria	2526	Open in IMG/M
3300018029\|Ga0187787_10186318	Not Available	725	Open in IMG/M
3300018058\|Ga0187766_10206619	Not Available	1242	Open in IMG/M
3300018058\|Ga0187766_10627442	Not Available	736	Open in IMG/M
3300018064\|Ga0187773_11146534	Not Available	519	Open in IMG/M
3300018085\|Ga0187772_10541490	Not Available	824	Open in IMG/M
3300018086\|Ga0187769_10007870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6671	Open in IMG/M
3300018086\|Ga0187769_10062598	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300018086\|Ga0187769_10107598	All Organisms → cellular organisms → Bacteria → Acidobacteria	2009	Open in IMG/M
3300018086\|Ga0187769_10423651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1002	Open in IMG/M
3300018088\|Ga0187771_10198667	Not Available	1663	Open in IMG/M
3300018088\|Ga0187771_10281159	Not Available	1392	Open in IMG/M
3300018088\|Ga0187771_10568729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300018088\|Ga0187771_10783380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300018088\|Ga0187771_10816167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300018088\|Ga0187771_11669207	Not Available	541	Open in IMG/M
3300018089\|Ga0187774_10596089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300018090\|Ga0187770_10085025	All Organisms → cellular organisms → Bacteria → Acidobacteria	2339	Open in IMG/M
3300018090\|Ga0187770_10353888	Not Available	1148	Open in IMG/M
3300018090\|Ga0187770_10376399	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300018090\|Ga0187770_11097035	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300018090\|Ga0187770_11647371	Not Available	524	Open in IMG/M
3300019275\|Ga0187798_1225994	Not Available	648	Open in IMG/M
3300019284\|Ga0187797_1398757	Not Available	646	Open in IMG/M
3300019284\|Ga0187797_1441345	Not Available	504	Open in IMG/M
3300027497\|Ga0208199_1059879	Not Available	807	Open in IMG/M
3300027570\|Ga0208043_1192851	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300027604\|Ga0208324_1019338	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300027641\|Ga0208827_1051989	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300027783\|Ga0209448_10029761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1822	Open in IMG/M
3300027854\|Ga0209517_10053364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3025	Open in IMG/M
3300027854\|Ga0209517_10191857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1269	Open in IMG/M
3300027894\|Ga0209068_10059041	All Organisms → cellular organisms → Bacteria → Acidobacteria	1961	Open in IMG/M
3300027905\|Ga0209415_10019165	All Organisms → cellular organisms → Bacteria	10736	Open in IMG/M
3300027905\|Ga0209415_10220702	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300027905\|Ga0209415_10426163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300030659\|Ga0316363_10217864	Not Available	788	Open in IMG/M
3300030706\|Ga0310039_10027157	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300030706\|Ga0310039_10282103	Not Available	633	Open in IMG/M
3300032782\|Ga0335082_11724184	Not Available	501	Open in IMG/M
3300032783\|Ga0335079_10003620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17806	Open in IMG/M
3300032783\|Ga0335079_10023449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7068	Open in IMG/M
3300032783\|Ga0335079_10086791	All Organisms → cellular organisms → Bacteria	3552	Open in IMG/M
3300032783\|Ga0335079_10329504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1660	Open in IMG/M
3300032783\|Ga0335079_11296710	Not Available	728	Open in IMG/M
3300032805\|Ga0335078_11457655	Not Available	768	Open in IMG/M
3300032805\|Ga0335078_11577817	Not Available	728	Open in IMG/M
3300032828\|Ga0335080_10007380	All Organisms → cellular organisms → Bacteria	11402	Open in IMG/M
3300032829\|Ga0335070_10021563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7431	Open in IMG/M
3300032892\|Ga0335081_10001861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	33399	Open in IMG/M
3300032892\|Ga0335081_10152629	All Organisms → cellular organisms → Bacteria	3299	Open in IMG/M
3300032892\|Ga0335081_12216638	Not Available	578	Open in IMG/M
3300032893\|Ga0335069_10003717	All Organisms → cellular organisms → Bacteria	22923	Open in IMG/M
3300032955\|Ga0335076_11233059	Not Available	632	Open in IMG/M
3300033808\|Ga0314867_117807	Not Available	619	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.27%
Aquatic	Environmental → Aquatic	27.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.27%
Freshwater	Environmental → Aquatic → Freshwater	26.05%
Sediment	Environmental → Aquatic → Sediment	1.68%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	52.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	52.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	21.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	35.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	21.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	19.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	12.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.36%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	3.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004468	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011082	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101228852	3300000567	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVLGADTGKAARVWP*
JGI12269J14319_100775702	3300001356	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIAAAAATAKTYSSTQQSNEPVIAADTGKAARVWP*
JGI12269J14319_101157523	3300001356	Peatlands Soil	MKNINDVMRHKELEIERLKKEIAALRVVAPMLEDEEPTREIAAAVSTAKTYSSTQQSNQPVIAADAGRAARVWP*
Ga0062385_103817301	3300004080	Bog Forest Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVISADTGKAARVWP*
Ga0062387_1005564692	3300004091	Bog Forest Soil	VKNIYDLMRQKELEIERLRKEIDALRVVAPMLEDEEPVREIAAAASPAKTYSSTQQSNEPVIAADTGRAARVWP*
Ga0062386_1012126402	3300004152	Bog Forest Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPTIAASSPGKPYSSAQQGNEPVIAADTGKAARVWP*
Ga0068977_12676641	3300004468	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASAPPAKTYSSTQQSNEPVISADTGKAARVWP*
Ga0068967_12752931	3300004470	Peatlands Soil	MKNIYDLMRQKELEIERLRKEIEALRVVAPMLEDKEPVREIAAAASPAKTYSSTQQSNEPVIAADTGRAARVWP*
Ga0075021_100657762	3300006354	Watersheds	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPVREIASPSPAKTYSSAQQSSEPAIAADTGKAARVWP*
Ga0116217_100490002	3300009700	Peatlands Soil	MKNIYDLMRQKELEIERLRKEIEALRVVAPMLEDKEPVREIAAAASPAKTYSSTQQSNEPVIASDTGRAARVWP*
Ga0116219_102213172	3300009824	Peatlands Soil	MKNIYDVIRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVLGADTGKAARVWP*
Ga0116219_102857792	3300009824	Peatlands Soil	EMKNIYDLMRQKELEIERLRKEIEALRVVAPMLEDKEPVREIAAAASPAKTYSSTQQSNEPVIAADTGRAARVWP*
Ga0074044_100174502	3300010343	Bog Forest Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAAAASPAKTYSSTQQSNEPVLGADTGKAARVWP*
Ga0126372_129989032	3300010360	Tropical Forest Soil	YDVMRQKELEIDRLKKEIEALRLVAPMLEDKEPAREIASSTPAKTYSATQQSSEQVLAADPVKAARVWP*
Ga0136449_1000901276	3300010379	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIAAAASPAKTYSSTQQSNEPVIAADTGKAARVWP*
Ga0136449_1004466533	3300010379	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPASEIAAAAATAKTYSSTQQSNEPVIAADTGKAARVWP*
Ga0138526_10574171	3300011082	Peatlands Soil	EMKNIYDLMRQKELEIERLRKDIEALRVVAPMLEDKEPVREIAAAASPAKTYSSTQQSNEPVIAADTGRAARVWP*
Ga0153915_101971093	3300012931	Freshwater Wetlands	MKNIHEVMRQKELEIERLKRELEALRMVVPLLEDKEGAREVAASAPASAKPYSSSQPSNEPAAVSDTGKATRVWP*
Ga0187812_10375422	3300017821	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAAAASPAKTYSSTQQSNEPVLGADTGKAARVWP
Ga0187812_12095861	3300017821	Freshwater Sediment	MKNIYDVMRQKELEIERLKREIEALRVVAPMLEDKETAREIAVPSAAKAYSATQQNNEPVIAAETGKAARVWP
Ga0187812_12688601	3300017821	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKETTREVAAPTSAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187818_100910822	3300017823	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRMVAPMLEDKEPAREIVAAASPVKTYSSTQQSNEPVIAADTGKAARVWP
Ga0187818_101321451	3300017823	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPVREVAAPTPAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187818_102054802	3300017823	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEAAREIVSPSPAKTYSSTQQNSEPVIAAETGKAARVWP
Ga0187818_103466022	3300017823	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAAAAAPAKTYSSAQQINEPVIVADAVKAARVWP
Ga0187818_103522082	3300017823	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPTIAASSPGKPYSSAQQSNEPVIAADTGKAARVWP
Ga0187818_104673102	3300017823	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVAALMLEDKEPAREIAAAASPAKTYSLTQESNEPAIAA
Ga0187818_105888031	3300017823	Freshwater Sediment	MKNIYDVMRQKELEIERLKREIEALRVVAPMLEDKETARKIAVPSAAKAYSATQQNNEPVSAAETGKAARVWP
Ga0187820_11091621	3300017924	Freshwater Sediment	MLYSRKRGHSKMKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKETTREVAAPTSAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187806_10167492	3300017928	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAAAASPAKTYSSTQQSNEPVLGADTGKAARVWS
Ga0187806_11565282	3300017928	Freshwater Sediment	MLYSRKRGHSKMKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPVREVAAPTPAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187814_102306641	3300017932	Freshwater Sediment	DVMRQKELEIERLKREIEALRVVAPMLEDKETAREIAVPSAAKAYSATQQNNEPVIAAETGKAARVWP
Ga0187814_103999872	3300017932	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAAAAAPAKTYSSAQQSNEPVIAADVGKAARVWP
Ga0187803_100138085	3300017934	Freshwater Sediment	MKNIYDVMRQKELDIERLKKEIEALRMVAPMLEDKEPAREIVAAASPAKTYSATQQSNEPVIAADTGKAARVWP
Ga0187803_102773642	3300017934	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRMVAPMLEDKEPARDIVAAASPVKTYSSTQQSNEPVIAADTGKAARVWP
Ga0187775_100071733	3300017939	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKETAREIASPSPAKTYSATQQSSEPVIGEPGKAARVWP
Ga0187775_100195792	3300017939	Tropical Peatland	MKNIYDVIRQKELEIERLKKEIEALRVVAPMLEDKETAREVASPSLAKTYSATQQSSEPVITGETGKAARVWP
Ga0187775_101026712	3300017939	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEVAREITTSAPAKTYSSAQQSTEPAIPADTGKAARVWP
Ga0187808_100377612	3300017942	Freshwater Sediment	MRQKELEIERLKREIEALRVVAPMLEDKETAREIAVPSAAKAYSATQQNNEPVIAAETGKAARVWP
Ga0187808_100631052	3300017942	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEATREVAAPTPAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187819_101264792	3300017943	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRMVAPMLEDKEPAREIAAAASPVKTYSSTQQSNEPVIAADTGKAARVWP
Ga0187817_101057504	3300017955	Freshwater Sediment	SRKRGHSKMKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEATREVAAPTPAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187817_104367392	3300017955	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDREPAPMATATATAKPYSSTQQNSEPVIAADTGKAARVWP
Ga0187779_100193495	3300017959	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIASPAPAKTYSATQQNSEPVIATETGKAARVWP
Ga0187779_104532971	3300017959	Tropical Peatland	AMLYSQRGLSEMKNIYDVMRQKELEIERLRKEIEALRVVAPMLEDKEPSREIAVAASQPKPYSAPQQSNDTVIGTETGKAARVWP
Ga0187778_100046497	3300017961	Tropical Peatland	MKNIYDVMRQKELDIERLKKEIEALRVVAPMLEDKEPAREIAASPSPSKTYSPTQQSSDTVIATDTGKAARVWP
Ga0187778_100047987	3300017961	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIASPAPAKTYSATQQSSEPVIATETGKAARVWP
Ga0187778_105967331	3300017961	Tropical Peatland	KNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPTREVAAPTPAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187776_100460874	3300017966	Tropical Peatland	MKNIYDVMRQKELDIERLKKEIEALRIVVPMLGDDQPPREIAPRSLAMTYYANLQDSEPVILANTGKPTGPVWP
Ga0187776_100618661	3300017966	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDRETAPITTSAAPAKPYSPTQQTSEPVITADTGKAARVWP
Ga0187776_101682591	3300017966	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRAVAPMLEDKETAREIASPSPAKTYSATQQSNEPVIT
Ga0187783_102515152	3300017970	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIASPSPAKAYSATQQNNEPVIATEPGKAARVWP
Ga0187783_112539512	3300017970	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAVATSPAKTYSATQQNSDTVIAPDTGKAARVWP
Ga0187781_101723593	3300017972	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMMEEKEPAREIAVATSPAKTYSATQQSTDSVVAPETGKAARVWP
Ga0187781_101763183	3300017972	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEAAREIASPSPAKAYSATQQNSEPVIATEPGKAARVWP
Ga0187781_114714931	3300017972	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAVATSPAKTYSATQQNSDTVIAPETGKAARVWP
Ga0187780_100277904	3300017973	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIASPAPAKTYSATQQSSEPVIATETGKAARVWP
Ga0187780_101734282	3300017973	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPTREVAAPTPAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187782_100609622	3300017975	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPTREVASPPPAKTYSATQQSSEPVISAEPGKAARVWP
Ga0187782_108997683	3300017975	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEAAREIASPSPAKAYSATQQNSEPVIAT
Ga0187767_100252303	3300017999	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPSREIAVAASQPKPYSAPQQSNDTVIGTETGKAARVWP
Ga0187815_105364181	3300018001	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEAAREMASPGSPGKTYSSAQQSNEPVIAADSGKAARVWP
Ga0187804_101727372	3300018006	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAAAAAPAKTYSSAQQSNEPVIAADAGKAARVWP
Ga0187804_104966992	3300018006	Freshwater Sediment	MKNIYELMRQKELELERLRKEIEALRVVAPMLEDKEPAREIAAAASPAKTYSSTQQSNKPVIAADTGRAP
Ga0187805_100272162	3300018007	Freshwater Sediment	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIAAAASPAKTYSSTQQSNEPVLGADTGKAARVWP
Ga0187787_101863181	3300018029	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDRETAPITTSSAPAKPYSPTQQTSEPVITADTGKAARVWP
Ga0187766_102066191	3300018058	Tropical Peatland	KNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPVREVAAPTPAKTYSATQQNNEPVIAAETGKAARVWP
Ga0187766_106274422	3300018058	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDREPAPMAASAATAKPYSSTQQNSEPVIAADTGKAARVWP
Ga0187773_111465341	3300018064	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEAAREIASPSPAKTYSATQQNNEPVIAAETGKGARVWP
Ga0187772_105414902	3300018085	Tropical Peatland	MKNIYDVMRQKELEIDRLKKEIEALRLVAPMLEEKEPAREVAVAATPAKTYSATQQNNDTVIAPETGKAARVWP
Ga0187769_100078705	3300018086	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPGRELGASTSTGKTYSSAQQSNEPVIAADTGKAARVWP
Ga0187769_100625983	3300018086	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIASSSPAKAYSATQQNNEPVIATEPGKAARVWP
Ga0187769_101075981	3300018086	Tropical Peatland	MKNIYDVMRQKELEVERLKKEIEALRVVAPMLEEKEPAREIAAPASPGKTYSATQQSNEPVLGADTGKAARVWP
Ga0187769_104236512	3300018086	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRLVAPMLEEKEPAREVAVAATPAKTYSATQQNSDTVIAPETGKAARVWP
Ga0187771_101986672	3300018088	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRLVAPMLEDKEPARELAVAASPGKTYSATQQSSETVIAPDPGKSARVWP
Ga0187771_102811591	3300018088	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPLREIASPSPAKAYSAAQQSSEPVITAETGKAARVWP
Ga0187771_105687292	3300018088	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKETAREMASPAPAKAYSATQQNNEPVIATETGKAARVWP
Ga0187771_107833801	3300018088	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIASPAPAKAYSATQQNNEPVIAAETGKAARVWP
Ga0187771_108161672	3300018088	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPTREIASPSPAKAYSATQQNNEPVIAAETGKAARVWP
Ga0187771_116692071	3300018088	Tropical Peatland	MKNIYDVMRQKELEVERLKKEIEALRVVAPMLEEKEPAREIAAPASPGKTYSATQQSNEPVLGADTGKAARGWP
Ga0187774_105960892	3300018089	Tropical Peatland	MKNIYDVMRQKEVEIERLKKEIEALRVVAPMLEDKEPVREMAAAASPTKTYSSTQQSGEPVIAADTGKA
Ga0187770_100850253	3300018090	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKETAREMASPAPAKAYSATQQNNEPVIATEPGKAARVWP
Ga0187770_103538882	3300018090	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPVREVAAPTPAKTYSATQQNNEPVIAA
Ga0187770_103763991	3300018090	Tropical Peatland	VMRQKELEVERLKKEIEALRVVAPMLEEKEPAREIAAPASPGKTYSATQQSNEPVLGADTGKAARVWP
Ga0187770_110970352	3300018090	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIASPSPAKAYSATQQNNEPVIATEPGKAAR
Ga0187770_116473711	3300018090	Tropical Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIASPAPAKAYSATQQNNEPVIATEPGKA
Ga0187798_12259941	3300019275	Peatland	AEMKNIYDVMRQKELEIERLKKEIEALRLVAPMLEEKEPAREVAVAATPAKTYSATQQNSDTVIAPETGKAARVWP
Ga0187797_13987571	3300019284	Peatland	EMKNIYDVMRQKELEIERLKKEIEALRLVAPMLEEKEPAREVAVAATPAKTYSATQQNSDTVIAPETGKAARVWP
Ga0187797_14413451	3300019284	Peatland	KMKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPGRELGASTSTGKTYSSAQQSNEPVIAADTGKAARVWP
Ga0208199_10598792	3300027497	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVLGADTGKAARVWP
Ga0208043_11928512	3300027570	Peatlands Soil	MKNIYDLMRQKELEIERLRKEIEALRVVAPMLEDKEPVREIAAAASPAKTYSSTQQSNEPVIAADTGRAARVWP
Ga0208324_10193382	3300027604	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVISADTGKAARVWP
Ga0208827_10519893	3300027641	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASAPPAKTYSSTQQSNEPVISADTGKAARVWP
Ga0209448_100297612	3300027783	Bog Forest Soil	VKNIYDLMRQKELEIERLRKEIDALRVVAPMLEDEEPVREIAAAASPAKTYSSTQQSNEPVIAADTGRAARVWP
Ga0209517_100533641	3300027854	Peatlands Soil	KNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVISADTGKAARVWP
Ga0209517_101918572	3300027854	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIAAAASPAKTYSSTQQSNEPVIAADTGKAARVWP
Ga0209068_100590412	3300027894	Watersheds	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPVREIASPSPAKTYSSAQQSSEPAIAADTGKAARVWP
Ga0209415_100191651	3300027905	Peatlands Soil	MKNINDVMRHKELEIERLKKEIAALRVVAPMLEDEEPTREIAAAVSTAKTYSSTQQSNQPVIAADAGRAARVWP
Ga0209415_102207023	3300027905	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVISAD
Ga0209415_104261632	3300027905	Peatlands Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIAAAAATAKTYSSTQQSNEPVIAADTGKAARVWP
Ga0316363_102178641	3300030659	Peatlands Soil	RGHSEMKNIYDVMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVLGADTGKAARVWP
Ga0310039_100271573	3300030706	Peatlands Soil	EMKNIYDLMRQKELEIERLRKEIEALRVVAPMLEDKEPVREIAAAASPAKTYSSTQQSNEPVIAADTGRAARVWP
Ga0310039_102821031	3300030706	Peatlands Soil	VMRQKELEIERLKKEIEALRVVAPMLEEKEPAREIAASASPAKTYSSTQQSNEPVLGADTGKAARVWP
Ga0335082_117241842	3300032782	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPSREIAASQGKPYSSTQQNEPVIAGD
Ga0335079_1000362017	3300032783	Soil	MKNIYDVMRQKELDIERLKKEIEALRVVAPMLEDKEPAREIAAAPSPSKAYSPTQQSSDTVIATDTGKAARVWP
Ga0335079_100234498	3300032783	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPTMATSSPGKPYSSAQQGSETVIAAETGKAARVWP
Ga0335079_100867911	3300032783	Soil	EIERLKKEIEALRVVAPMLEDKEPAREIAASPGKPYSAAQQNNEPVIAGDTGKAARVWP
Ga0335079_103295042	3300032783	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKESGRELSASTSPGKTYSSAQQSNEPVIAADTGKTARVWP
Ga0335079_112967101	3300032783	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPTMATSSPGKPYSSAQQSNEPVIAAETGKAARVWP
Ga0335078_114576552	3300032805	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIAASPGKPYSAAQQNNEPVIAGDTGKAARVWP
Ga0335078_115778171	3300032805	Soil	MKNIYDVMRQKELEIERLKKEIEALRLVAPMLEEKEPAREVAVAATPPKTYSATQQNNDTVIAPETGKAARVWP
Ga0335080_100073803	3300032828	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPSREIAIAASPAKPYSSTQQSNDTVIGTETAKAARVWP
Ga0335070_100215633	3300032829	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKETAREIASPSPAKPYSATQQNNEPVIAADTGKAARVWP
Ga0335081_100018615	3300032892	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREVAVSSSPGKTYSSVQQNNEPVIAADTGKAARVWP
Ga0335081_101526292	3300032892	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDREPAPMAASTPTAKPYSSTQQNSEPVIAADTGKAARVWP
Ga0335081_122166381	3300032892	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIASPSAPGKSYSPQQSNEPVIAADTGKAARVWP
Ga0335069_100037172	3300032893	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKETAREIASPSPAKTYSATQQNNEPVIAADTGKAARVWP
Ga0335076_112330591	3300032955	Soil	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKETGREVAASPAKTYSATQQNNNEPVIAAETGKAARVWP
Ga0314867_117807_336_560	3300033808	Peatland	MKNIYDVMRQKELEIERLKKEIEALRVVAPMLEDKEPAREIAAAAVPAKTYSPTQQSNEPVIAAETGKAARVWP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074958

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences