Metagenome Family F074933

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074933
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	66 residues
Representative Sequence	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Number of Associated Samples	103
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.83 %
% of genes near scaffold ends (potentially truncated)	48.74 %
% of genes from short scaffolds (< 2000 bps)	93.28 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.672 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil (8.403 % of family members)
Environment Ontology (ENVO)	Unclassified (42.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.546 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.18% β-sheet: 0.00% Coil/Unstructured: 43.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02518	HATPase_c	31.09
PF02798	GST_N	3.36
PF12680	SnoaL_2	2.52
PF00486	Trans_reg_C	2.52
PF13456	RVT_3	2.52
PF13847	Methyltransf_31	1.68
PF03572	Peptidase_S41	1.68
PF07992	Pyr_redox_2	1.68
PF09339	HTH_IclR	1.68
PF02867	Ribonuc_red_lgC	1.68
PF01391	Collagen	0.84
PF14026	DUF4242	0.84
PF12697	Abhydrolase_6	0.84
PF07883	Cupin_2	0.84
PF08352	oligo_HPY	0.84
PF14559	TPR_19	0.84
PF12637	TSCPD	0.84
PF00156	Pribosyltran	0.84
PF04024	PspC	0.84
PF04542	Sigma70_r2	0.84
PF00344	SecY	0.84
PF14340	DUF4395	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	1.68
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG0201	Preprotein translocase subunit SecY	Intracellular trafficking, secretion, and vesicular transport [U]	0.84
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.84
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.84
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.84
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.67 %
Unclassified	root	N/A	19.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.67 %
Unclassified	root	N/A	19.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.67 %
Unclassified	root	N/A	19.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.71 %
Unclassified	root	N/A	19.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.20 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.84 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.87 %
Unclassified	root	N/A	19.33 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.52 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.33 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	16.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.52 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.84 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.33 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	15.97 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.24 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.52 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	1.68 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.84 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.84 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.84 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.24 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	8.40 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.52 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	1.68 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.84 %
Baekduiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae	0.84 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.84 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.84 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.24 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	6.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.52 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	1.68 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.68 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.84 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.84 %
Baekduia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.24 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	6.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.52 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	1.68 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.68 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.84 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.84 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.84 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.24 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	6.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.52 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	1.68 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.68 %
Rhizobium sp. BK313	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. BK313	0.84 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.84 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.84 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.84 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_110594036	Not Available	2009	Open in IMG/M
3300001305\|C688J14111_10022905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	1850	Open in IMG/M
3300001686\|C688J18823_10611193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300002568\|C688J35102_119296639	Not Available	669	Open in IMG/M
3300002568\|C688J35102_119767922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300002568\|C688J35102_120424581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300002568\|C688J35102_120597860	Not Available	1224	Open in IMG/M
3300002568\|C688J35102_120771304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1534	Open in IMG/M
3300002568\|C688J35102_120807337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1642	Open in IMG/M
3300003267\|soilL1_10185071	Not Available	1203	Open in IMG/M
3300004081\|Ga0063454_100363777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	946	Open in IMG/M
3300004153\|Ga0063455_101519256	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300004463\|Ga0063356_100812781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1306	Open in IMG/M
3300005327\|Ga0070658_11707458	Not Available	545	Open in IMG/M
3300005329\|Ga0070683_101582558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300005330\|Ga0070690_100347648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1075	Open in IMG/M
3300005331\|Ga0070670_101811859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	562	Open in IMG/M
3300005334\|Ga0068869_100083245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2392	Open in IMG/M
3300005335\|Ga0070666_10309976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M
3300005338\|Ga0068868_101000906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300005339\|Ga0070660_100201167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1616	Open in IMG/M
3300005340\|Ga0070689_100984234	Not Available	750	Open in IMG/M
3300005343\|Ga0070687_100325159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	984	Open in IMG/M
3300005367\|Ga0070667_101567752	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005435\|Ga0070714_101606237	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005437\|Ga0070710_10722473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300005439\|Ga0070711_100295214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1287	Open in IMG/M
3300005441\|Ga0070700_100453584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300005457\|Ga0070662_101622923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300005466\|Ga0070685_11204540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300005530\|Ga0070679_101810985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300005539\|Ga0068853_101433483	Not Available	668	Open in IMG/M
3300005547\|Ga0070693_101406642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300005548\|Ga0070665_101194017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300005549\|Ga0070704_101066193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300005615\|Ga0070702_100128435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1598	Open in IMG/M
3300005617\|Ga0068859_100565117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1231	Open in IMG/M
3300005618\|Ga0068864_100322229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300005841\|Ga0068863_101591826	Not Available	662	Open in IMG/M
3300005985\|Ga0081539_10173975	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300006358\|Ga0068871_101014975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300006755\|Ga0079222_11123445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300006871\|Ga0075434_100873157	Not Available	915	Open in IMG/M
3300007076\|Ga0075435_101025106	Not Available	721	Open in IMG/M
3300009093\|Ga0105240_11390148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300009094\|Ga0111539_10246284	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300009094\|Ga0111539_10534762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1365	Open in IMG/M
3300009094\|Ga0111539_13139020	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300009098\|Ga0105245_11078493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	849	Open in IMG/M
3300009098\|Ga0105245_12115470	Not Available	616	Open in IMG/M
3300009101\|Ga0105247_10385310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300009148\|Ga0105243_10916299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300009162\|Ga0075423_12416330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300009177\|Ga0105248_12558999	Not Available	582	Open in IMG/M
3300009553\|Ga0105249_10420673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	1370	Open in IMG/M
3300009553\|Ga0105249_10462396	Not Available	1309	Open in IMG/M
3300010039\|Ga0126309_11269662	Not Available	509	Open in IMG/M
3300010371\|Ga0134125_12099341	Not Available	614	Open in IMG/M
3300010373\|Ga0134128_10838647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1018	Open in IMG/M
3300010400\|Ga0134122_12648170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300010403\|Ga0134123_10611508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1049	Open in IMG/M
3300012212\|Ga0150985_109056086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1157	Open in IMG/M
3300012951\|Ga0164300_10164119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300012958\|Ga0164299_10608231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	748	Open in IMG/M
3300012960\|Ga0164301_10613256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	805	Open in IMG/M
3300012984\|Ga0164309_10564431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	883	Open in IMG/M
3300012987\|Ga0164307_10528696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300012989\|Ga0164305_11015338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300013307\|Ga0157372_10914533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1018	Open in IMG/M
3300014325\|Ga0163163_12982295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	528	Open in IMG/M
3300014325\|Ga0163163_13206936	Not Available	510	Open in IMG/M
3300014326\|Ga0157380_12740248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300014497\|Ga0182008_10873264	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300015371\|Ga0132258_10658325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2634	Open in IMG/M
3300015372\|Ga0132256_100950759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	975	Open in IMG/M
3300018433\|Ga0066667_11631593	All Organisms → cellular organisms → Bacteria → Terrabacteria group	576	Open in IMG/M
3300025321\|Ga0207656_10024803	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300025321\|Ga0207656_10322254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300025899\|Ga0207642_10262951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300025900\|Ga0207710_10219403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300025908\|Ga0207643_10050338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2362	Open in IMG/M
3300025918\|Ga0207662_11126001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300025923\|Ga0207681_10259575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1360	Open in IMG/M
3300025927\|Ga0207687_11388322	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300025927\|Ga0207687_11449184	Not Available	590	Open in IMG/M
3300025935\|Ga0207709_10664642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	831	Open in IMG/M
3300025936\|Ga0207670_10125657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1871	Open in IMG/M
3300025937\|Ga0207669_11173509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300025939\|Ga0207665_11144860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	620	Open in IMG/M
3300025942\|Ga0207689_10280817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1379	Open in IMG/M
3300025944\|Ga0207661_10648883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	970	Open in IMG/M
3300025944\|Ga0207661_10751865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	897	Open in IMG/M
3300025961\|Ga0207712_10154350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1777	Open in IMG/M
3300025981\|Ga0207640_11442036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300026035\|Ga0207703_11790461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300026041\|Ga0207639_11934574	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300026075\|Ga0207708_10373898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1174	Open in IMG/M
3300026088\|Ga0207641_10754734	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300026095\|Ga0207676_10439688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1227	Open in IMG/M
3300026118\|Ga0207675_100950037	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300026118\|Ga0207675_102059958	Not Available	587	Open in IMG/M
3300026142\|Ga0207698_10521343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300027766\|Ga0209796_10158669	Not Available	711	Open in IMG/M
3300027787\|Ga0209074_10263053	Not Available	675	Open in IMG/M
3300028380\|Ga0268265_10567103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1080	Open in IMG/M
3300028596\|Ga0247821_10523161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300028597\|Ga0247820_11245931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300028809\|Ga0247824_10367058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300030511\|Ga0268241_10029592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1110	Open in IMG/M
3300031152\|Ga0307501_10046432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300031226\|Ga0307497_10577698	Not Available	565	Open in IMG/M
3300031938\|Ga0308175_100496169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1297	Open in IMG/M
3300031938\|Ga0308175_101656421	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300031939\|Ga0308174_11079953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. BK313	682	Open in IMG/M
3300032074\|Ga0308173_12214329	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032126\|Ga0307415_101428211	Not Available	660	Open in IMG/M
3300034268\|Ga0372943_0024949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3207	Open in IMG/M
3300034268\|Ga0372943_0660185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.26%
Environmental	Environmental	48.74%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.26%
Terrestrial	Environmental → Terrestrial	48.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.17%
Roots	Host-Associated → Plants → Roots	2.52%
Phylloplane	Host-Associated → Plants → Phylloplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.37%
Loam	Environmental → Terrestrial → Soil → Loam	24.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.40%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	8.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.52%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	8.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.84%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1105940365	3300000956	Soil	MTDERADRDTPSIMRSPSDLAGFWNRLADLDAEIAHLHGEGYDADVDRLLDERAEWQAERDDLFRWLGRVPRRR*
C688J14111_100229052	3300001305	Soil	MRSPSELAGFWSRMADLDAEILRCHADGYEVEVNRLLDERARWQQERDELFVGLAPFARRP*
C688J18823_106111931	3300001686	Soil	NRLADLDAEIARCHADGYAADVDRLLEERALWQQERDEMLRGLARFERRR*
C688J35102_1192966391	3300002568	Soil	MRSPSELAGFWNRLADLDAEIARCHADGYDVDVDRLLEERAAWQRERDEMFRGLAGRP*
C688J35102_1197679221	3300002568	Soil	MRSPSELAGFWSRMADLDAEILRCHADGYEADVNRLLDERARWQQERDELLLGLTPLAQRP*
C688J35102_1204245812	3300002568	Soil	MRSPSELAGFWNRLADLDAEIARCHADGYDADVDRLLDERALWQRERDDMFRGLEPLRRRP*
C688J35102_1205978602	3300002568	Soil	MRSPSELAGFWNRVADLDDEISQCHADGYAADVDRLLDERARWQRERDELFLGLPRAARRA*
C688J35102_1207713042	3300002568	Soil	VHRGWASAVFMSVASPGRDLAVRDGADREPRGVMRSPSELAGFWNRVADLDAEISRCHTDGYAADVDRLLDERAQWQHERDDLLRGLARFTRRS*
C688J35102_1208073372	3300002568	Soil	MRSPSELAGFWNRLADLDAEIARCHADGYAADVDRLLEERALWQQERDEMLRGLARFERRR*
soilL1_101850712	3300003267	Sugarcane Root And Bulk Soil	MRSPSELAGFWSRLADLDAEIAQCHAEGYEADVDRLLEDRARWQRERDELFSGLTRFARRP*
Ga0063454_1003637772	3300004081	Soil	MRSPSELAGFWNRVADLDAEISRCHADGYAADVDRLLDERTQWQHERDDLLGGLARFARRP*
Ga0063455_1015192561	3300004153	Soil	EREERPVMRSPSELAGFWNRLADLDAEIARCHADGYDVDVDRLLEERAAWQRERDEMFRGLAGRP*
Ga0063356_1008127811	3300004463	Arabidopsis Thaliana Rhizosphere	MTDERADRDTPSIMRSPSDLAGFWNRLADLDAEISKRHDEGYDADVDRLLDERAEWQAERDDLFRWLAESPLRRRPRPG*
Ga0070658_117074581	3300005327	Corn Rhizosphere	MMGRRPVTDEPTPRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR*
Ga0070683_1015825582	3300005329	Corn Rhizosphere	SDACGRDVAMRQRPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR*
Ga0070690_1003476482	3300005330	Switchgrass Rhizosphere	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0070670_1018118591	3300005331	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDLFRWLGRVSRRRR*
Ga0068869_1000832452	3300005334	Miscanthus Rhizosphere	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR*
Ga0070666_103099762	3300005335	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0068868_1010009062	3300005338	Miscanthus Rhizosphere	QVGSSDGCGRDVAMRQRPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR*
Ga0070660_1002011672	3300005339	Corn Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR*
Ga0070689_1009842342	3300005340	Switchgrass Rhizosphere	SDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR*
Ga0070687_1003251592	3300005343	Switchgrass Rhizosphere	LAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR*
Ga0070667_1015677521	3300005367	Switchgrass Rhizosphere	MMDRRPVTDEPTPRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0070714_1016062371	3300005435	Agricultural Soil	SVTDEPTHRDTPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERTEWQAERDDLFRWLGRAPRRR*
Ga0070710_107224732	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERTEWQAERDDLFRWLGRAPRRG*
Ga0070711_1002952141	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERTEWQAERDDLFRWLGRAPRRR*
Ga0070700_1004535842	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR*
Ga0070662_1016229231	3300005457	Corn Rhizosphere	PDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR*
Ga0070685_112045402	3300005466	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERTRWQAERDDLFRWLGRVS
Ga0070679_1018109852	3300005530	Corn Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRR
Ga0068853_1014334832	3300005539	Corn Rhizosphere	MRQRPDREPRVIMRSPSELAGFWNRLADLDAEILQCHAEGYAADVDRLLDDRAQWQHERDELFRGLARVTPRR*
Ga0070693_1014066422	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	QRPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR*
Ga0070665_1011940172	3300005548	Switchgrass Rhizosphere	VTDEPTHRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERTRWQAERDDLFRWLGRVPPRR*
Ga0070704_1010661932	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MMSARPVTDEPTHRDTPRVMRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDLFRWLGRVSRRRR*
Ga0070702_1001284352	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR*
Ga0068859_1005651171	3300005617	Switchgrass Rhizosphere	PPSLGSRPMTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0068864_1003222292	3300005618	Switchgrass Rhizosphere	MGSRPMTDDPTRHDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0068863_1015918261	3300005841	Switchgrass Rhizosphere	DLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0081539_101739753	3300005985	Tabebuia Heterophylla Rhizosphere	VSRAVGTIGAMSPSELAGFWNRLADLDAEIAQCHADGYRADVDRLLDERVRWQRERDELFAALPARPRRR*
Ga0068871_1010149751	3300006358	Miscanthus Rhizosphere	DAPRLMRSPSDLAGFWNRLADLDAEISHLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0079222_111234452	3300006755	Agricultural Soil	VRERPDREPRVIMRSPSELAGFWNRLADLDAAISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLTRVTPRR*
Ga0075434_1008731572	3300006871	Populus Rhizosphere	SIASTIMGSRPMTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWVGRAPRRR*
Ga0075435_1010251061	3300007076	Populus Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLF
Ga0105240_113901482	3300009093	Corn Rhizosphere	DDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0111539_102462841	3300009094	Populus Rhizosphere	VIPSPSELAGFWSRLADLDADIRLCHAEGYEAEVDRLLDERTRWQQERDELFRRLPRPARGS*
Ga0111539_105347622	3300009094	Populus Rhizosphere	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWVGRAPRRR*
Ga0111539_131390201	3300009094	Populus Rhizosphere	STIMGSRPMTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0105245_110784931	3300009098	Miscanthus Rhizosphere	MRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDL
Ga0105245_121154702	3300009098	Miscanthus Rhizosphere	SGAVGTTRAMSPSELAGFWNRLADLDAEIAQCHAQGYEADVDRLLDERVLWQHERDELLRGLAGRPRRA*
Ga0105247_103853102	3300009101	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0105243_109162992	3300009148	Miscanthus Rhizosphere	SPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR*
Ga0075423_124163302	3300009162	Populus Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0105248_125589991	3300009177	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAQWQAERDEL
Ga0105249_104206731	3300009553	Switchgrass Rhizosphere	MRERPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGL
Ga0105249_104623961	3300009553	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDLFRWL
Ga0126309_112696621	3300010039	Serpentine Soil	SGNQRMMRSPSELAGFWNRVADLDAEIVQCHAEGYEADVDRLLDERARWQQERDDLFLGLERLARRS*
Ga0126312_101453981	3300010041	Serpentine Soil	MMRSPSELAGFWNRVADLDAEIVQCHAEGYEADIDRLLDERARWQQERDD
Ga0134125_120993411	3300010371	Terrestrial Soil	MRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDLFRWLGRVPRRRR*
Ga0134128_108386472	3300010373	Terrestrial Soil	MRSPSDLAGFWYRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPRRRR*
Ga0134122_126481701	3300010400	Terrestrial Soil	DVAMRQRPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR*
Ga0134123_106115081	3300010403	Terrestrial Soil	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDER
Ga0150985_1090560861	3300012212	Avena Fatua Rhizosphere	MRSPSELAGFWSRMADLDAEILQCHADGYEVEVNRLLDERARWQQERDELFVGLAPFARHP*
Ga0164300_101641191	3300012951	Soil	PSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDLFRWLGRVPRRRR*
Ga0164299_106082311	3300012958	Soil	MMRARPVTDEPTHRDAPRLMRSPSDLAGCWNHLADLDAEIAQLHGEGYDADVDRLLDERAEW
Ga0164301_106132561	3300012960	Soil	MMRARPVTDEPTHRDAPRLMRSPSDLAGFWNHLADLDAEIAQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRLPRRR*
Ga0164309_105644312	3300012984	Soil	MRSPSDLAGFWNHLADLDAEIAQLHGEGYDADVDRLLDERAEWQAERDELFRWLGRLPGRR*
Ga0164307_105286961	3300012987	Soil	DLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDLFRWLGRLPGRR*
Ga0164305_110153381	3300012989	Soil	MRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDLFRWLGRAPRRRR*
Ga0157372_109145331	3300013307	Corn Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDD
Ga0163163_129822951	3300014325	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERDDVFR
Ga0163163_132069362	3300014325	Switchgrass Rhizosphere	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0157380_127402481	3300014326	Switchgrass Rhizosphere	DAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR*
Ga0182008_108732642	3300014497	Rhizosphere	MSPSELAGFWTRLADLDAEIARCHAEGYAADVDRLLDERMRWQQERDELFRGLARLPRRA
Ga0132258_106583252	3300015371	Arabidopsis Rhizosphere	MMKFEPMADEPTHRDAPRVMRSPSDLAGFWNRVADLDAEISQRHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPRRP*
Ga0132256_1009507592	3300015372	Arabidopsis Rhizosphere	MADDPTHRDAPRLMRSPSDLAGFWNRVADLDAEISQRHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR*
Ga0066667_116315932	3300018433	Grasslands Soil	RNSGSAWVMYSPSELAGFWTRLADLDAEISRCHAAGYTADVDRLLDERAAWQQQRDELFRALPRVTRRP
Ga0207656_100248031	3300025321	Corn Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPR
Ga0207656_103222542	3300025321	Corn Rhizosphere	MRQRPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR
Ga0207642_102629512	3300025899	Miscanthus Rhizosphere	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207710_102194032	3300025900	Switchgrass Rhizosphere	VTDEPTPRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207643_100503382	3300025908	Miscanthus Rhizosphere	MGSRPMTDDPTRHDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207662_111260011	3300025918	Switchgrass Rhizosphere	APRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR
Ga0207681_102595752	3300025923	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPRR
Ga0207687_113883221	3300025927	Miscanthus Rhizosphere	MRSPSDLAGFWNRLADLDAEIAQLHGEGYDAEVDRLLDERTRWQAERD
Ga0207687_114491841	3300025927	Miscanthus Rhizosphere	SGAVGTTRAMSPSELAGFWNRLADLDAEIAQCHAQGYEADVDRLLDERVLWQHERDELLRGLAGRPRRA
Ga0207709_106646422	3300025935	Miscanthus Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFR
Ga0207670_101256572	3300025936	Switchgrass Rhizosphere	MRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRR
Ga0207669_111735091	3300025937	Miscanthus Rhizosphere	MMGRRPVTDEPTPRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR
Ga0207665_111448602	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	HRMHDDGSSSVTDEPTHRDTPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERTEWQAERDDLFRWLGRAPRRR
Ga0207689_102808172	3300025942	Miscanthus Rhizosphere	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR
Ga0207661_106488832	3300025944	Corn Rhizosphere	MRQRPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLAR
Ga0207661_107518652	3300025944	Corn Rhizosphere	PRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207712_101543501	3300025961	Switchgrass Rhizosphere	PSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207640_114420362	3300025981	Corn Rhizosphere	MTDDPTRHDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207703_117904611	3300026035	Switchgrass Rhizosphere	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFR
Ga0207639_119345742	3300026041	Corn Rhizosphere	LAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207708_103738982	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207641_107547342	3300026088	Switchgrass Rhizosphere	PVRAAAARSADSARPNPASTMMSARRVTDEPTHRDTPRVMRSPGDLAGFWNRLADLDAEISQLHGEGYTAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207676_104396882	3300026095	Switchgrass Rhizosphere	MGSRPMTDDPTRHDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYAAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0207675_1009500371	3300026118	Switchgrass Rhizosphere	PRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR
Ga0207675_1020599581	3300026118	Switchgrass Rhizosphere	MVCGMSGAVGTTRAMSPSELAGFWNRLADLDAEIAQCHAQGYEADVDRLLDERGRWQQERDELFRGLTRVPRRS
Ga0207698_105213433	3300026142	Corn Rhizosphere	MRERPDREPRVIMRSPSELAGFWNRLADLDAEISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLARVTPRR
Ga0209796_101586692	3300027766	Agave	MLSPSELAGFWNRMADLDAEIVSCHAKGYEADVDRLLDERARWQQERDEMFRGLRRFTRR
Ga0209074_102630531	3300027787	Agricultural Soil	VRERPDREPRVIMRSPSELAGFWNRLADLDAAISQCHAEGYEADVDRLLDDRAQWQHERDELFRGLTRVTPRR
Ga0268265_105671032	3300028380	Switchgrass Rhizosphere	PTPRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPPRR
Ga0247821_105231612	3300028596	Soil	MTDDPTRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0247820_112459312	3300028597	Soil	RDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0247824_103670581	3300028809	Soil	MTDDPIRRDAPRLMRSPSDLAGFWNRLADLDAEISQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRVPRRR
Ga0268241_100295922	3300030511	Soil	MSGQIGKCGPIMHCPSELAGFWSRLADLDAEIVQCHADGYAVEVDRLLEERALWQRERDELFRGLARFGRRA
Ga0307501_100464322	3300031152	Soil	MRSPGELAAFRNRLADLDAEIARCHADGYDADVDRLLDERALWQRERDEMFRGLAPSGRR
Ga0307497_105776981	3300031226	Soil	MRSPSDLAGFWNHLADLDAEIAQLHGEGYDAEVDRLLDERAEWQAERDDLFRWLGRLPRR
Ga0308175_1004961693	3300031938	Soil	FWNRLADLDAEIARCHADGYDADVDRLLDERGRWQRERDEMFRGLAPFTRRP
Ga0308175_1016564212	3300031938	Soil	MSPSELAGFWTRLADLDAEIAQCHAEGYAADVDRLLDERMLWQQERDELFRGLARL
Ga0308174_110799532	3300031939	Soil	MRSPSELAGFWNRLADLDAEIAECHAAGYEADVDRLLDERARWQQERDELLRGLGRVSRR
Ga0308173_122143292	3300032074	Soil	SGTTRLMHSPSELAGFWNRVADIDAEIVQCHADGYQADVDRLLDERARWQRERDELFRGLARPARRL
Ga0307415_1014282112	3300032126	Rhizosphere	ELAGFWNRLADLDAEIVQCHAAGYEADVDRLLDERARWQEERDEMFRGLARFTRRE
Ga0372943_0024949_3_158	3300034268	Soil	MMRSPSELAGFWNRLADLDAEISQCHAAGYAADVDRLLDERRRWQQERDELF
Ga0372943_0660185_527_688	3300034268	Soil	GFWNRLADLDAEISQCHAAGYAADVDRLLDERRRWQQERDELFRGLAPVPRRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074933

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences