NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074915

Metagenome / Metatranscriptome Family F074915

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074915
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 111 residues
Representative Sequence MASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Number of Associated Samples 102
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 4.17 %
% of genes near scaffold ends (potentially truncated) 50.42 %
% of genes from short scaffolds (< 2000 bps) 75.63 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (57.983 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(31.092 % of family members)
Environment Ontology (ENVO) Unclassified
(59.664 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(87.395 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.68%    β-sheet: 10.71%    Coil/Unstructured: 61.61%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF05050Methyltransf_21 5.04
PF01370Epimerase 1.68
PF04266ASCH 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG2411Predicted RNA-binding protein, contains PUA-like ASCH domainGeneral function prediction only [R] 0.84
COG3097Uncharacterized conserved protein YqfB, UPF0267 familyFunction unknown [S] 0.84
COG4405Predicted RNA-binding protein YhfF, contains PUA-like ASCH domainGeneral function prediction only [R] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.98 %
All OrganismsrootAll Organisms42.02 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10006579All Organisms → cellular organisms → Bacteria6319Open in IMG/M
3300000117|DelMOWin2010_c10021381All Organisms → Viruses → Predicted Viral3355Open in IMG/M
3300001963|GOS2229_1015269Not Available1644Open in IMG/M
3300005214|Ga0069002_10060584Not Available877Open in IMG/M
3300005433|Ga0066830_10032849All Organisms → Viruses → Predicted Viral1042Open in IMG/M
3300006025|Ga0075474_10054640Not Available1345Open in IMG/M
3300006025|Ga0075474_10108129Not Available894Open in IMG/M
3300006026|Ga0075478_10176766Not Available658Open in IMG/M
3300006383|Ga0075504_1093382Not Available604Open in IMG/M
3300006402|Ga0075511_1815487All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300006403|Ga0075514_1930966All Organisms → cellular organisms → Bacteria1985Open in IMG/M
3300006637|Ga0075461_10023894All Organisms → Viruses → Predicted Viral2018Open in IMG/M
3300006734|Ga0098073_1002989All Organisms → Viruses → Predicted Viral3965Open in IMG/M
3300006734|Ga0098073_1035148Not Available695Open in IMG/M
3300006735|Ga0098038_1252781Not Available556Open in IMG/M
3300006752|Ga0098048_1011034Not Available3189Open in IMG/M
3300006790|Ga0098074_1042067All Organisms → Viruses → Predicted Viral1298Open in IMG/M
3300006790|Ga0098074_1187871Not Available515Open in IMG/M
3300006802|Ga0070749_10541492Not Available631Open in IMG/M
3300006868|Ga0075481_10093140All Organisms → Viruses → Predicted Viral1123Open in IMG/M
3300006870|Ga0075479_10139057Not Available994Open in IMG/M
3300006916|Ga0070750_10183294All Organisms → Viruses934Open in IMG/M
3300006919|Ga0070746_10345917Not Available675Open in IMG/M
3300006920|Ga0070748_1029924Not Available2238Open in IMG/M
3300006922|Ga0098045_1035503Not Available1271Open in IMG/M
3300007234|Ga0075460_10118965Not Available938Open in IMG/M
3300007345|Ga0070752_1120661Not Available1103Open in IMG/M
3300007538|Ga0099851_1026389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila2337Open in IMG/M
3300007539|Ga0099849_1198042Not Available757Open in IMG/M
3300007540|Ga0099847_1020620All Organisms → Viruses → Predicted Viral2147Open in IMG/M
3300007640|Ga0070751_1242529Not Available687Open in IMG/M
3300009001|Ga0102963_1024923All Organisms → Viruses → Predicted Viral2510Open in IMG/M
3300009027|Ga0102957_1260259Not Available629Open in IMG/M
3300009071|Ga0115566_10099101All Organisms → Viruses → Predicted Viral1877Open in IMG/M
3300009124|Ga0118687_10001954Not Available7572Open in IMG/M
3300009135|Ga0118736_10084188Not Available853Open in IMG/M
3300009193|Ga0115551_1223283Not Available840Open in IMG/M
3300009423|Ga0115548_1146419Not Available746Open in IMG/M
3300009476|Ga0115555_1220037Not Available778Open in IMG/M
3300009497|Ga0115569_10472735Not Available533Open in IMG/M
3300009509|Ga0123573_11723409Not Available581Open in IMG/M
3300009593|Ga0115011_10881412Not Available748Open in IMG/M
3300010299|Ga0129342_1050591All Organisms → cellular organisms → Bacteria1632Open in IMG/M
3300010299|Ga0129342_1351841Not Available501Open in IMG/M
3300010300|Ga0129351_1307851Not Available599Open in IMG/M
3300010318|Ga0136656_1010369All Organisms → Viruses → Predicted Viral3374Open in IMG/M
3300010318|Ga0136656_1042069All Organisms → Viruses → Predicted Viral1652Open in IMG/M
3300010354|Ga0129333_10912965Not Available742Open in IMG/M
3300016754|Ga0182072_1104318Not Available793Open in IMG/M
3300017776|Ga0181394_1182994Not Available643Open in IMG/M
3300017949|Ga0181584_10035649All Organisms → Viruses → Predicted Viral3575Open in IMG/M
3300017949|Ga0181584_10389610All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon874Open in IMG/M
3300017951|Ga0181577_10348395Not Available952Open in IMG/M
3300017951|Ga0181577_10500509Not Available760Open in IMG/M
3300017952|Ga0181583_10373381Not Available892Open in IMG/M
3300017962|Ga0181581_10089147All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2136Open in IMG/M
3300017964|Ga0181589_10974617Not Available516Open in IMG/M
3300017968|Ga0181587_10425244All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon874Open in IMG/M
3300017969|Ga0181585_10351137Not Available1016Open in IMG/M
3300018039|Ga0181579_10394591Not Available749Open in IMG/M
3300018421|Ga0181592_10336841All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300018421|Ga0181592_10378039Not Available1005Open in IMG/M
3300018423|Ga0181593_10208431Not Available1536Open in IMG/M
3300018423|Ga0181593_11038114Not Available561Open in IMG/M
3300018424|Ga0181591_10006956All Organisms → cellular organisms → Bacteria9780Open in IMG/M
3300018424|Ga0181591_10205732Not Available1546Open in IMG/M
3300019267|Ga0182069_1305793Not Available692Open in IMG/M
3300019277|Ga0182081_1471681All Organisms → cellular organisms → Bacteria2779Open in IMG/M
3300019751|Ga0194029_1008710All Organisms → Viruses → Predicted Viral1423Open in IMG/M
3300019756|Ga0194023_1021711All Organisms → Viruses → Predicted Viral1298Open in IMG/M
3300019765|Ga0194024_1008871All Organisms → Viruses → Predicted Viral2089Open in IMG/M
3300020054|Ga0181594_10053145All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2646Open in IMG/M
3300021368|Ga0213860_10389059Not Available604Open in IMG/M
3300021371|Ga0213863_10159970Not Available1020Open in IMG/M
3300021957|Ga0222717_10072935All Organisms → Viruses → Predicted Viral2184Open in IMG/M
3300021958|Ga0222718_10034672All Organisms → Viruses → Predicted Viral3340Open in IMG/M
3300021958|Ga0222718_10144069All Organisms → Viruses → Predicted Viral1352Open in IMG/M
3300021958|Ga0222718_10145658Not Available1343Open in IMG/M
3300021960|Ga0222715_10257463Not Available1012Open in IMG/M
3300021961|Ga0222714_10248079All Organisms → Viruses → Predicted Viral1000Open in IMG/M
3300021964|Ga0222719_10002569All Organisms → cellular organisms → Bacteria16505Open in IMG/M
3300022057|Ga0212025_1076547Not Available576Open in IMG/M
3300022071|Ga0212028_1030989Not Available973Open in IMG/M
3300022158|Ga0196897_1005266All Organisms → Viruses → Predicted Viral1619Open in IMG/M
3300022158|Ga0196897_1008013Not Available1314Open in IMG/M
3300022176|Ga0212031_1083710Not Available544Open in IMG/M
3300022187|Ga0196899_1027861All Organisms → cellular organisms → Bacteria2007Open in IMG/M
3300022187|Ga0196899_1081504Not Available989Open in IMG/M
3300022218|Ga0224502_10365310Not Available559Open in IMG/M
3300022934|Ga0255781_10137686Not Available1277Open in IMG/M
3300022937|Ga0255770_10023094All Organisms → Viruses → Predicted Viral4392Open in IMG/M
3300023170|Ga0255761_10100253All Organisms → Viruses → Predicted Viral1816Open in IMG/M
(restricted) 3300023210|Ga0233412_10521288Not Available538Open in IMG/M
3300025057|Ga0208018_102677All Organisms → Viruses → Predicted Viral3228Open in IMG/M
3300025057|Ga0208018_107343All Organisms → Viruses → Predicted Viral1673Open in IMG/M
3300025057|Ga0208018_117282Not Available887Open in IMG/M
3300025083|Ga0208791_1082373Not Available519Open in IMG/M
3300025084|Ga0208298_1008685Not Available2605Open in IMG/M
3300025151|Ga0209645_1036647All Organisms → Viruses → Predicted Viral1781Open in IMG/M
3300025632|Ga0209194_1058841All Organisms → Viruses → Predicted Viral1072Open in IMG/M
3300025647|Ga0208160_1006483All Organisms → Viruses → Predicted Viral4215Open in IMG/M
3300025655|Ga0208795_1145427Not Available597Open in IMG/M
3300025687|Ga0208019_1199642Not Available524Open in IMG/M
3300025759|Ga0208899_1210319Not Available610Open in IMG/M
3300025769|Ga0208767_1070218Not Available1521Open in IMG/M
3300025771|Ga0208427_1079846All Organisms → Viruses → Predicted Viral1158Open in IMG/M
3300025840|Ga0208917_1064047All Organisms → Viruses → Predicted Viral1420Open in IMG/M
3300025853|Ga0208645_1008127All Organisms → Viruses → environmental samples → uncultured marine virus6728Open in IMG/M
3300025869|Ga0209308_10064744All Organisms → Viruses → Predicted Viral1876Open in IMG/M
3300025889|Ga0208644_1011470All Organisms → Viruses → environmental samples → uncultured marine virus6010Open in IMG/M
3300025889|Ga0208644_1304476Not Available631Open in IMG/M
3300025895|Ga0209567_10088501All Organisms → Viruses → Predicted Viral1437Open in IMG/M
(restricted) 3300027881|Ga0255055_10607090Not Available585Open in IMG/M
3300027917|Ga0209536_100340857Not Available1875Open in IMG/M
3300029448|Ga0183755_1007536All Organisms → Viruses → Predicted Viral4679Open in IMG/M
3300032136|Ga0316201_11098708Not Available666Open in IMG/M
3300032254|Ga0316208_1061093Not Available1072Open in IMG/M
3300032257|Ga0316205_10029492All Organisms → Viruses → Predicted Viral2960Open in IMG/M
3300034375|Ga0348336_082996Not Available1150Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous31.09%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh19.33%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine12.61%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.88%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.88%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.04%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.52%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.68%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat1.68%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.68%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.68%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.68%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.84%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow0.84%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.84%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.84%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.84%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.84%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.84%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.84%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.84%
Marine SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment0.84%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment0.84%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300005214Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordC_D2EnvironmentalOpen in IMG/M
3300005433Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45BEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006383Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006403Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006734Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009135Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 382 cmbsfEnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300016754Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018039Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018423Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019267Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071402VT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019277Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019751Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MGEnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020054Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022218Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13EnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300022937Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaGEnvironmentalOpen in IMG/M
3300023170Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300025057Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025895Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M
3300032254Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month chalcopyriteEnvironmentalOpen in IMG/M
3300032257Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyriteEnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1000657943300000116MarineMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
DelMOWin2010_1002138153300000117MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYATAGVWERATEVSIEIA*
GOS2229_101526913300001963MarineMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGV
Ga0069002_1006058413300005214Natural And Restored WetlandsMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTSTALRAISTAATNKYAIIFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAI
Ga0066830_1003284913300005433MarineMASALPTPNDCCNCADGTAISTTTLDAYILSKVRGYAPGFFAVSTLAALRDIATDELNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIS*
Ga0075474_1005464023300006025AqueousMASALPNPNDCCNCADGTAITTTTLDAYITSVIGSDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
Ga0075474_1010812923300006025AqueousLMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIS*
Ga0075478_1017676623300006026AqueousMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTA
Ga0075504_109338213300006383AqueousNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
Ga0075511_181548713300006402AqueousPNPNDCCNCADGTAITTTTLDAYITSVIGSDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
Ga0075514_193096613300006403AqueousPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
Ga0075461_1002389433300006637AqueousMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP*
Ga0098073_100298943300006734MarineMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIS*
Ga0098073_103514813300006734MarineMASALPTPNDCCNCADGTAITTTTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAA
Ga0098038_125278123300006735MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSINRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTSGVWERATEVSIEIA*
Ga0098048_101103423300006752MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSINRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIP*
Ga0098074_104206723300006790MarineMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIA*
Ga0098074_118787113300006790MarineMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIS*
Ga0070749_1054149213300006802AqueousMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAE
Ga0075481_1009314023300006868AqueousMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIP*
Ga0075479_1013905733300006870AqueousYPSPDMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIS*
Ga0070750_1018329423300006916AqueousMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP*
Ga0070746_1034591713300006919AqueousKLMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIS*
Ga0070748_102992423300006920AqueousMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIA*
Ga0098045_103550333300006922MarineISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSINRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIP*
Ga0075460_1011896513300007234AqueousMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYILSKVRGYAPGFFAVSTLAALRDVATDSLNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAG
Ga0070752_112066123300007345AqueousMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIS*
Ga0099851_102638923300007538AqueousMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVRGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
Ga0099849_119804213300007539AqueousMASALPNPNDCCNCADGTAINTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
Ga0099847_102062033300007540AqueousMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIS*
Ga0070751_124252913300007640AqueousMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEA
Ga0102963_102492333300009001Pond WaterMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIP*
Ga0102957_126025913300009027Pond WaterMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIP*
Ga0115566_1009910123300009071Pelagic MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIS*
Ga0118687_10001954103300009124SedimentMASALPNPNDCCNCADGTAITTTTLDAYILAQVKGSAAVGIYAVDSLSDLRAVLTSSTNRYAVVFGATPTDFTNWKWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
Ga0118736_1008418823300009135Marine SedimentMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIA*
Ga0115551_122328313300009193Pelagic MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIS*
Ga0115548_114641913300009423Pelagic MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEI
Ga0115555_122003723300009476Pelagic MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIS*
Ga0115569_1047273523300009497Pelagic MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYATA
Ga0123573_1172340913300009509Mangrove SedimentTTEAQSPAVGYLKGAGFFVVNTSLVRYPSPDMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP*
Ga0115011_1088141223300009593MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVDSLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVNYIRPNDYTTAGVWERATEVSIE
Ga0129342_105059133300010299Freshwater To Marine Saline GradientMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP*
Ga0129342_135184113300010299Freshwater To Marine Saline GradientMASALTNPNDCCNCADGTAITTTTLDAYITSVIGSDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA*
Ga0129351_130785113300010300Freshwater To Marine Saline GradientMASALPNPNDCCNCADGTAITTTTLDAYITSVIGSDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTG
Ga0136656_101036943300010318Freshwater To Marine Saline GradientASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP*
Ga0136656_104206943300010318Freshwater To Marine Saline GradientMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAI
Ga0129333_1091296523300010354Freshwater To Marine Saline GradientDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP*
Ga0182072_110431823300016754Salt MarshLPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0181394_118299413300017776SeawaterNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSINRYAVVFGATPTDFTNWKWNNTGTNADDGVDYIRPNDYTTAGVWERATEVSIEIS
Ga0181584_1003564943300017949Salt MarshDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Ga0181584_1038961023300017949Salt MarshMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVR
Ga0181577_1034839513300017951Salt MarshHSLVQYPSPDMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Ga0181577_1050050913300017951Salt MarshMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYILSKVRGYAPGFFAVSTLAALRDVATDSLNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAI
Ga0181583_1037338113300017952Salt MarshMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Ga0181581_1008914733300017962Salt MarshMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0181589_1097461713300017964Salt MarshQYPSPDMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Ga0181587_1042524423300017968Salt MarshMASALPNPNDCCNCADGSAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVR
Ga0181585_1035113713300017969Salt MarshMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAS
Ga0181579_1039459113300018039Salt MarshPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Ga0181592_1033684133300018421Salt MarshMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Ga0181592_1037803913300018421Salt MarshMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIS
Ga0181593_1020843133300018423Salt MarshMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNY
Ga0181593_1103811423300018423Salt MarshCCNCADGTAITAKTLDAYIQSVVTGSAVGYYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Ga0181591_1000695613300018424Salt MarshMASALPNPNDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIS
Ga0181591_1020573213300018424Salt MarshMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAG
Ga0182069_130579313300019267Salt MarshPNPNDCCNCADGSAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0182081_147168143300019277Salt MarshAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0194029_100871033300019751FreshwaterMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYATAGVWERATEVSIEIA
Ga0194023_102171133300019756FreshwaterMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDY
Ga0194024_100887143300019765FreshwaterMASALPNPTDCCNCADGTAITATTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEIP
Ga0181594_1005314533300020054Salt MarshMASALPNPNDCCNCADGSAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0213860_1038905913300021368SeawaterMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYILSKVRGYAPGFFAVSTLAALRDVATDSLNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEI
Ga0213863_1015997033300021371SeawaterMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIS
Ga0222717_1007293523300021957Estuarine WaterMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIA
Ga0222718_1003467253300021958Estuarine WaterMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYATAGVWERATEVSIEIA
Ga0222718_1014406933300021958Estuarine WaterMASALPNPNDCCNCADGTAITTTTLDAYILAQVKGSAAVGIYAVASLSDLREILTSSINRYAVVFGATPPDFTNWKWNNTGTNADDGVNYVRPSDYTTGGVWVRAD
Ga0222718_1014565813300021958Estuarine WaterMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP
Ga0222715_1025746333300021960Estuarine WaterMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIA
Ga0222714_1024807923300021961Estuarine WaterVNTSLVQYPSPDMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP
Ga0222719_1000256943300021964Estuarine WaterMASALPNPNDCCNCADGTAITTTTLDAYILAQVKGSAAVGIYAVDSLSDLRAVLTSSTNRYAVVFGATPTDFTNWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0212025_107654713300022057AqueousMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSAF
Ga0212028_103098933300022071AqueousFFVVNTSLVRYPSPDMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP
Ga0196897_100526633300022158AqueousMASALPNPNDCCNCADGTAITTTTLDAYITSVIGSDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0196897_100801313300022158AqueousMASALPTPNDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP
Ga0212031_108371013300022176AqueousMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVRGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0196899_102786133300022187AqueousVKLMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIS
Ga0196899_108150413300022187AqueousMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKA
Ga0224502_1036531013300022218SedimentMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEI
Ga0255781_1013768623300022934Salt MarshMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYILSKVRGYAPGFFAVSTLAALRDVATDSLNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWEKAAEEAIEI
Ga0255770_1002309413300022937Salt MarshMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTG
Ga0255761_1010025333300023170Salt MarshTTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
(restricted) Ga0233412_1052128813300023210SeawaterMASALPNPNDCCSCADGTAISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYIRPNDYTTAGVWERATEVSIEIS
Ga0208018_10267733300025057MarineMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEI
Ga0208018_10734333300025057MarineMASALPTPNDCCNCADGTAITTTTLDAYIQSVVTGSAVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIS
Ga0208018_11728223300025057MarineMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIS
Ga0208791_108237313300025083MarineISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSINRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIP
Ga0208298_100868543300025084MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSINRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIP
Ga0209645_103664723300025151MarineMASALPTPNDCCNCADGTAISTTTLDAYILSKVRGYAPGFFAVSTLAALRDIATDELNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIS
Ga0209194_105884113300025632Pelagic MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSI
Ga0208160_100648343300025647AqueousMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEI
Ga0208795_114542723300025655AqueousGMASALPNPNDCCNCADGTAITTTTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0208019_119964213300025687AqueousTLDAYITSVIGGSASDVQGFYAVDTIVALRAIATASTNKIATVFGTDAPDGKNLTHWRWDNTGTNADDGVNYVRPSDYTTGGVWVRADEDALSA
Ga0208899_121031913300025759AqueousMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYILSKVRGYAPGFFAVSTLAALRDVATDSLNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWA
Ga0208767_107021813300025769AqueousMASALPTPNDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWA
Ga0208427_107984623300025771AqueousMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKASEEAIEIP
Ga0208917_106404733300025840AqueousMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSD
Ga0208645_100812713300025853AqueousMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGV
Ga0209308_1006474433300025869Pelagic MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIS
Ga0208644_101147013300025889AqueousMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYIQSVVTGSTVGFYAVDTLTALRAIATAATNKYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVW
Ga0208644_130447613300025889AqueousMASALPNPTDCCNCADGTAITATTLDAYIQSVVSGSTVGFYAVDTLTALRAISTAATNKYAIVFGATPSDLTQWKWNNSGTNADDG
Ga0209567_1008850133300025895Pelagic MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIS
(restricted) Ga0255055_1060709013300027881SeawaterMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYIRPNDYTTA
Ga0209536_10034085713300027917Marine SedimentMLVRYPSPDMASALPTPNDCCNCADGTAITATTLDAYILSKVRGYAPGFFAVSTLAALRDVATDSLNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAGNRYKRVSKPAPRLTTAST
Ga0183755_100753673300029448MarineMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAILTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVDYIRPNDYTTAGVWERATEVSIEIS
Ga0316201_1109870813300032136Worm BurrowMASALPTPNDCCNCADGTAITATTLDAYILSKVRGYAPGFFAVSTLAALRDVATDALNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTTAGVWAKAAEEAIEIP
Ga0316208_106109323300032254Microbial MatMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGATPTDFTNWKWNNTGTNADDGVDYVRPNDYTTAGVWERATEVSIEIA
Ga0316205_1002949263300032257Microbial MatMASALPNPNDCCSCADGTSISTTTLDAYILAQVKGSAAVGIYAVASLSDLRAVLTSSTNRYAVVFGSTPTDFTNWKWNNTGTNADDGVNYVRPNDYTTAGVWERATEVSIEIS
Ga0348336_082996_3_2933300034375AqueousMASALPTPNDCCNCADGTAITATTLDAYILSKVRGYAPGFFAVSTLAALRDVATDALNRYAIVFGATPSDLTQWKWNNSGTNADDGVNYVRPSDFTT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.