Metagenome / Metatranscriptome Family F074854

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F074854
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	81 residues
Representative Sequence	MKAGAIYLLSRKVNGDHGEPYMQNVTVFASSAAQAKSLVDDQFAALRKTARGRERAYQPVPEFSVEKVSLEDYKMITAGITKY
Number of Associated Samples	98
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.92 %
% of genes near scaffold ends (potentially truncated)	24.37 %
% of genes from short scaffolds (< 2000 bps)	89.08 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (31.092 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.580 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.42% β-sheet: 22.52% Coil/Unstructured: 54.05%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF10518	TAT_signal	6.72
PF00578	AhpC-TSA	6.72
PF01209	Ubie_methyltran	2.52
PF07291	MauE	1.68
PF03239	FTR1	0.84
PF00575	S1	0.84
PF03167	UDG	0.84
PF00892	EamA	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	2.52
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	2.52
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.84
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.84
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.64 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.64 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	94.12 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	92.44 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	92.44 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M102G501R	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300000443\|F12B_10431607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300000956\|JGI10216J12902_102044640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300000956\|JGI10216J12902_103507924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1431	Open in IMG/M
3300000956\|JGI10216J12902_103724570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1850	Open in IMG/M
3300003659\|JGI25404J52841_10144755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300004114\|Ga0062593_101354732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300004156\|Ga0062589_102253386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005164\|Ga0066815_10038657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300005165\|Ga0066869_10053949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300005166\|Ga0066674_10012434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3555	Open in IMG/M
3300005169\|Ga0066810_10149890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300005329\|Ga0070683_100013314	All Organisms → cellular organisms → Bacteria	7170	Open in IMG/M
3300005329\|Ga0070683_100457600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1218	Open in IMG/M
3300005457\|Ga0070662_101004733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300005526\|Ga0073909_10010195	All Organisms → cellular organisms → Bacteria	2847	Open in IMG/M
3300005526\|Ga0073909_10569630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300005713\|Ga0066905_100326623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1216	Open in IMG/M
3300005713\|Ga0066905_101325137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300005764\|Ga0066903_101073277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1481	Open in IMG/M
3300005764\|Ga0066903_104625503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300005937\|Ga0081455_10654629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300005983\|Ga0081540_1001185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22837	Open in IMG/M
3300006573\|Ga0074055_10009749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1278	Open in IMG/M
3300006575\|Ga0074053_11885522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300006576\|Ga0074047_11807031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300006577\|Ga0074050_11874214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300006578\|Ga0074059_12155672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M
3300006581\|Ga0074048_13266610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1185	Open in IMG/M
3300006605\|Ga0074057_12341016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2273	Open in IMG/M
3300006606\|Ga0074062_12834540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300006606\|Ga0074062_13017440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300006852\|Ga0075433_10526387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300006852\|Ga0075433_10616342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300006854\|Ga0075425_100050656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4651	Open in IMG/M
3300006953\|Ga0074063_10084685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2089	Open in IMG/M
3300006953\|Ga0074063_14284161	All Organisms → cellular organisms → Bacteria	2489	Open in IMG/M
3300007076\|Ga0075435_100573512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300009147\|Ga0114129_11060119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300009162\|Ga0075423_11295737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300009792\|Ga0126374_10528038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300010047\|Ga0126382_11536884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300010147\|Ga0126319_1166345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	900	Open in IMG/M
3300010154\|Ga0127503_10669085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1088	Open in IMG/M
3300010325\|Ga0134064_10085499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300010362\|Ga0126377_10288826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1612	Open in IMG/M
3300010362\|Ga0126377_10559326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300011106\|Ga0151489_1123712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300011106\|Ga0151489_1299850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300011107\|Ga0151490_1806165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300012198\|Ga0137364_10164831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1610	Open in IMG/M
3300012350\|Ga0137372_10717336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300012355\|Ga0137369_10780984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300012901\|Ga0157288_10420353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012948\|Ga0126375_10254030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1192	Open in IMG/M
3300012951\|Ga0164300_10922870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300012955\|Ga0164298_10154327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1293	Open in IMG/M
3300012961\|Ga0164302_11926555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300012971\|Ga0126369_10390542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1426	Open in IMG/M
3300012971\|Ga0126369_12590559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300012972\|Ga0134077_10104872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1097	Open in IMG/M
3300012984\|Ga0164309_10683744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300012985\|Ga0164308_10446797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1069	Open in IMG/M
3300012986\|Ga0164304_11122774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300014325\|Ga0163163_11764071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300014326\|Ga0157380_11579489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300015371\|Ga0132258_11178699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1937	Open in IMG/M
3300015371\|Ga0132258_11692601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1595	Open in IMG/M
3300015371\|Ga0132258_11907953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1495	Open in IMG/M
3300015371\|Ga0132258_13885099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1016	Open in IMG/M
3300015373\|Ga0132257_100898838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1110	Open in IMG/M
3300015374\|Ga0132255_100573754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1665	Open in IMG/M
3300015374\|Ga0132255_104747258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300017659\|Ga0134083_10052656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1537	Open in IMG/M
3300018028\|Ga0184608_10021750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2336	Open in IMG/M
3300018031\|Ga0184634_10205876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300018031\|Ga0184634_10553548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300018054\|Ga0184621_10121939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300018072\|Ga0184635_10045228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1691	Open in IMG/M
3300018072\|Ga0184635_10136392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300018073\|Ga0184624_10169491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	966	Open in IMG/M
3300018074\|Ga0184640_10167679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300018074\|Ga0184640_10258942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300018076\|Ga0184609_10240964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300018081\|Ga0184625_10312791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300018083\|Ga0184628_10251165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300018482\|Ga0066669_10501165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1051	Open in IMG/M
3300018482\|Ga0066669_11032520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300019362\|Ga0173479_10046724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1400	Open in IMG/M
3300019873\|Ga0193700_1031001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300020005\|Ga0193697_1050903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300020016\|Ga0193696_1025366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1590	Open in IMG/M
3300021510\|Ga0222621_1074519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300021951\|Ga0222624_1304229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300022694\|Ga0222623_10309075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300022756\|Ga0222622_10075510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1997	Open in IMG/M
3300022756\|Ga0222622_10424779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300025899\|Ga0207642_10461950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300025915\|Ga0207693_10375489	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300025916\|Ga0207663_10707402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	798	Open in IMG/M
3300025920\|Ga0207649_10066589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2284	Open in IMG/M
3300025933\|Ga0207706_10190507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1800	Open in IMG/M
3300025944\|Ga0207661_10473002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1143	Open in IMG/M
3300026324\|Ga0209470_1010854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5418	Open in IMG/M
3300027821\|Ga0209811_10052652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1395	Open in IMG/M
3300028707\|Ga0307291_1006614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2476	Open in IMG/M
3300028796\|Ga0307287_10080742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1219	Open in IMG/M
3300028799\|Ga0307284_10276591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300028878\|Ga0307278_10149624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1046	Open in IMG/M
3300030336\|Ga0247826_10752853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300030993\|Ga0308190_1131894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300031058\|Ga0308189_10366668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300031152\|Ga0307501_10238090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300031170\|Ga0307498_10000221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7107	Open in IMG/M
3300031226\|Ga0307497_10354789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300031421\|Ga0308194_10041136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1141	Open in IMG/M
3300031720\|Ga0307469_11112052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300032205\|Ga0307472_100405018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1143	Open in IMG/M
3300033550\|Ga0247829_11277469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.51%
Host-Associated	Host-Associated	18.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.55%
Plants	Host-Associated → Plants	18.49%
Aquatic	Environmental → Aquatic	15.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.55%
Sediment	Environmental → Aquatic → Sediment	13.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.40%
Freshwater	Environmental → Aquatic → Freshwater	2.52%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.45%
Loam	Environmental → Terrestrial → Soil → Loam	8.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.52%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.52%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.52%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.84%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_07474820	2189573001	Grass Soil	MKDGAIFLLSRQVQGDHGESYVQNVSVFANSAAQAISLVDDQFASLRKTARGHEHAYQPVPKFSVEQVSLEDYKMITAGITKY
F12B_104316072	3300000443	Soil	MKDGAIYLLSRQGKGDHGESYMQNVTVFAXXETQAKSLVDDQFAALRKANGAARDLAYQKLPEFSVEKVSLEAYKMITAGXXXY*
JGI10216J12902_1020446401	3300000956	Soil	VKDGAIYLLSRQVKGDHGESYMQNVTVFANGATQAKSLVDNQFAALRKSNGVARDLAYQKLPEFSVEKVSLDAYKMITAGITTY*
JGI10216J12902_1035079244	3300000956	Soil	MIDGAIYLLSRRVQGDHGESFVQNVTVFASSAAEARSLVAREFAPLRTSNGTAYQAQPEFSVERVTLDAHKMITAGITTY*
JGI10216J12902_1037245702	3300000956	Soil	MIDGAIYLLSRQVQGEHGEQYMQNVSVFASSAAQARSLVNGEFAALRRSGGSSARAYQALPEFSVERVSLDAYKMITAGITAY*
JGI25404J52841_101447552	3300003659	Tabebuia Heterophylla Rhizosphere	DGAIYLLSRQVKGDYGESYMQNVIVFASSPAQAESLVDGQFAAFRKGPRGRESAYQRLPKFFVEKVSLDQYKMITAGITTY*
Ga0062593_1013547322	3300004114	Soil	MIDGAIYLLSRRVRGDHGESFMQNVTVFASSPAQARSLVNAQFATMRRSNESAYQAQPEFSVEKISLDAHKMITAGITTY*
Ga0062589_1022533862	3300004156	Soil	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAQSLVDDQFAALRKTATGRERAYQPVPKFSVEKVSLDDYKMITAGVTKY*
Ga0066815_100386572	3300005164	Soil	MKDGSIFLLSRQVKGDHGESYMQNVTVFASSEAQAKSLVDDQFSTLRKGARGQERAYQALPKFSVEKVSLEEYKMITAGITTY*
Ga0066869_100539491	3300005165	Soil	MKDGDIYLLSRQVHGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKTERGRERAYQPVPKFSVEKVSLEDYKMITAGIT
Ga0066674_100124347	3300005166	Soil	MKDGAIYLLSRQVKGVHGESYMQNVTVFANSSTQAKSLVDDQFAALRKSSSVGDLAYQKLPEFSVEKVTLDAYKMITAGITAY*
Ga0066810_101498901	3300005169	Soil	MKDGSIYLLSRQVKGDHGESYMQNVTVFAPSAAQAKAIVDDQFAAFRQGAKGQERAYQALPKFSVERVSLEDYKMITAGVTT*
Ga0070683_1000133146	3300005329	Corn Rhizosphere	MKSGAIYLLSRQVHGDHGESYMQNVTVFAESADQAKYLVDDQFSALRQGGRLAHERAYQKLPEFSVEKVSLEEYKMISAGITTY*
Ga0070683_1004576002	3300005329	Corn Rhizosphere	MKDGAIFLLSRRVQGDHGESYMQNVTVFASDATQAKSLVDQQFAAFRQTDRGHERAYQVLPKFSVEQVKLDEYKMITAGITTY*
Ga0070662_1010047331	3300005457	Corn Rhizosphere	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAQSLVDDQFAALRKTATGRERAYQPVPKFSVERVSLDDYKMITAGVTKY*
Ga0073909_100101956	3300005526	Surface Soil	MKDGDIYLLSRQVRGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKTERGRERAYQPVPKFSVEKVSLEDYKMITAGITFY*
Ga0073909_105696301	3300005526	Surface Soil	MIDGAIYLLSRQVRGDHGESFMQNVTVFASSPAQARSLVNAQFATMRRSNESAYQAQPEFSVEK
Ga0066905_1003266232	3300005713	Tropical Forest Soil	MMNGAIYLLSRQVKGDHGESFMQNVTVFASSSTHARTIVNDQFTRLRKQSTVPENAYQALPEFSIDKVSLDNYKMITAGITFF*
Ga0066905_1013251372	3300005713	Tropical Forest Soil	MKDGAVYLLSRQVKGDHGESYMQNVTVFASSAAQAKALVDQQFSALRKADRAHENAYQALPAFNVEKVSLDQYKMITAGITTY*
Ga0066903_1010732774	3300005764	Tropical Forest Soil	MIDGAIYLLSRRVQGDHGESFVQNVTVFASSAAQARTLVDHEFAALRSSSAARAYQVQPAFSVERVSLDAPKMITAGITTY*
Ga0066903_1046255032	3300005764	Tropical Forest Soil	MKDGSIFLLSRQVQGDHGESYMQNVTVFASDAAQAKSLVDQQFAAFRGSDRGHERAYQALPKFSVEQVKLDECKMITVGVTQY*
Ga0081455_106546292	3300005937	Tabebuia Heterophylla Rhizosphere	MDGAIYLLSRQVKGDHGESYMQNVTVFASSAAEAKSLVDQQFAALRNGDRSHERAYQVLPEFDVEKVSLDKHKMITAGITTY*
Ga0081540_100118520	3300005983	Tabebuia Heterophylla Rhizosphere	MIDGAIYLLSRQVKGDYGESYMQNVIVFASSPAQAESLVDGQFAAFRKGPRGRESAYQRLPKFFVEKVSLDQYKMITAGITTY*
Ga0074055_100097493	3300006573	Soil	MKDGDIYLLSRQVQGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKTERGRERAYQPVPKFSVEKVSLEDYKMITAGITFY*
Ga0074053_118855222	3300006575	Soil	MKDGSIFLLSRQVKGDHGESYMQNVTVFAPSAAQAKAIVDDQFAAFRQGARGHERAYQALPKFSVERVSLEDYKMITAGVTT*
Ga0074047_118070312	3300006576	Soil	MKDGSIYLLSRQVKGDHGESYMQNVTVFAPSAAQAKAIVDDQFAAFRQGAKGQERAYQALPKFSVERVSLEDYKMITAGVTA*
Ga0074050_118742142	3300006577	Soil	MKDGSIYLLSRQVKGDHGESYMQNVTVFAPSAAQAKAIVDDQFAAFRQGAKGQERAYQALPKFSVERVSLEDYKMITA
Ga0074059_121556721	3300006578	Soil	MKDGSIFLLSRQVKGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKGERGRERAYQPVPKFSVEKVSLEDYKMITAGI
Ga0074048_132666103	3300006581	Soil	MKDGSIYLLSRQVKGDHGESYMQNVTVFAPSAAQAKAIVDDQFAAFRKGARGQERAYQALPKFSVERVSLEDYKMITAGVTT*
Ga0074057_123410165	3300006605	Soil	MKDGDIYLLSRQVQGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKTERGRERAYQPVPKFSVEKVSLEDYKMITAGITYY*
Ga0074062_128345402	3300006606	Soil	MKDGDIYLLSRQVQGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKGERGRERAYQPVPKFSVEKVSLEDYKMITAGITYY*
Ga0074062_130174402	3300006606	Soil	MKDGSIFLLSRQVKGDHGESYMQNVTVFASSAAQAKSLVDDQFSTLRKGARGQERAYQALPKFSVEKVSLEEYKMITAGITTY*
Ga0075433_105263872	3300006852	Populus Rhizosphere	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSATQAKSLVDDQFAALRQSNGVGDLAYQKLPAFSVEKVSLDAYKMITAGITTY*
Ga0075433_106163422	3300006852	Populus Rhizosphere	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAQSLVNDQFAALRKTATGRERAYQPLPKFSVEKVSLEDYKMITAGVTKY*
Ga0075425_1000506563	3300006854	Populus Rhizosphere	MIDGAIYLLSRQVQGDHGESFVQNVTVFASSPAQARSLVNQQFATMRRANESAYQAQPEFSVERVSLDAHKMITAGITTY*
Ga0074063_100846855	3300006953	Soil	MKDGDIYLLSRQVHGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKGERGRERAYQPVPKFSVEKVSLEDYKMITAGITYY*
Ga0074063_142841614	3300006953	Soil	MKDGSIFLLSRQVKGDHGESYMQNVTVFASSAAQAKSLVDDQFSTLRQGARGQERAYQALPKFSVEKVSLEEYKMITAGITTY*
Ga0075435_1005735121	3300007076	Populus Rhizosphere	MIDGAIYLLSRQVQGDHGESFVQNVTVFASSPAQARSLVNQQFATMRRANESAYQAQPEFSVERVSLDAHKMITAG
Ga0114129_110601193	3300009147	Populus Rhizosphere	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSATQAKSLVDDQFAALRRSNGARDLAYQKLPEFSVEKVSLDVYKMITAGITTY*
Ga0075423_112957372	3300009162	Populus Rhizosphere	MKDGAIYLLFCQVNGDHGESYMQNVTVFANSATQAKSLVDDQFAALRQSNGVGDLAYQKLPAFSVEKVSLDAYKMITAGITTY*
Ga0126374_105280383	3300009792	Tropical Forest Soil	MIDGAIYLLSRRVSGDHGESFVQNVTVFASSAAQARTLVNQQFATMRRANETPYQTQPDFSVERVSLDAHKMITAGITTY*
Ga0126382_115368841	3300010047	Tropical Forest Soil	MIDGAIYLLSRQVKGDHGESYMQNVTVFASSPAQAESLVNDQFAAFRKGPRRRDSAYQRLPKFFVEKVPLDQYKMITAGITNY*
Ga0126319_11663452	3300010147	Soil	MKAGAIYLLSRKVNGDHGEPYMQNVTVFASSAAQAKSLVDDQFAALRKTATGRERAYQPVPEFSVEKVSLEDYKMITAGVTKY*
Ga0127503_106690851	3300010154	Soil	GTGGEVMKAGAIYLLSRKVNGDHGEPYMQNVTVFANSAAQAKSLVDDQFAALRKTATGRERAYQPVPEFSVEKVSLEDYKMITAGVTKY*
Ga0134064_100854993	3300010325	Grasslands Soil	EGMKDGAIYLLSRQVPGDHGESYMQNVTVFANSSTQAKSLVDDQFAALRKSSSVGDLAYQKLPEFSVEKVTLDAYKMITAGITTY*
Ga0126377_102888264	3300010362	Tropical Forest Soil	MIDGAIYLLSRRVSGDHGESFVQNVTVFASSAAQARTLVDQQFATMRRANETPYQTQPDFSVERVSLDAHKMITAGITTY*
Ga0126377_105593262	3300010362	Tropical Forest Soil	MDGAIYLLSRQVSGDHGESYMQNVTVFASSAAQAKSLVRDQFAQFRKGATDGASAYQALPEFSVERVSLDAHKMITAGITTY*
Ga0151489_11237122	3300011106	Soil	MKDGSIFLLSRQVKGDHGESYMQNVTVFASSAAQAKSLVDDQFAALRRTDRSHERPYQALPAFSVEKVSLEEYKMITAGITTY*
Ga0151489_12998502	3300011106	Soil	MKAGAIYLLSRKVNGDHGEPYMQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPEFSVEKVSLEDYKMITAGITYY*
Ga0151490_18061651	3300011107	Soil	MKDGSIYLLSRQVKGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKTERGRERAYQPVPKFSVEKVSLEDYKM
Ga0137364_101648312	3300012198	Vadose Zone Soil	MKAGAIYLLSRKVNGDHGEPYMQNVTVFASSAAQAKSLVDDQFAALRKTARGRERAYQPVPEFSVEKVSLEDYKMITAGITKY*
Ga0137372_107173362	3300012350	Vadose Zone Soil	MKNGAIYLLSRQVNGDHGESYMQNVTVFANSATQAKSLVDDQFAALRESNGLHDLAYQKLPEFSVEKVSLDVYKMITAGITTY*
Ga0137369_107809842	3300012355	Vadose Zone Soil	MKDGAIYLLSRQVKGDHAESYMQNVTVFANSETQAKSLVDDQFAALRKSNGARDLAYQKLPDFSVEKVSLDAYKMITAGITTY*
Ga0157288_104203532	3300012901	Soil	MKDGAIYLLSRQVNGDHGEPYVQNVTVFANSAAQAQSLVDDQFAALRKTATGRERAYQPVPKFSVEKVSLDDYKMITAGVTKY*
Ga0126375_102540302	3300012948	Tropical Forest Soil	MIDGAIYLLSRRVSGDHGESFVQNVTVFASSAAQARTLVGHEFAALRNSSAAPAYQVQPAFSVERVSLDAHKMITAGITTY*
Ga0164300_109228701	3300012951	Soil	MIDGAIYLLSRQVRGDHGESFMQNVTVFASSPAQARSLVNAQFATMRRSNESAYQAQPEFSVEKISLDAHKMITAGITTY*
Ga0164298_101543274	3300012955	Soil	MKDGDIYLLSRQVQGDHGESYMQNVTVFASSAAQAVSLVDDQFASLRKTERGRERAYQPVPKFSVEK
Ga0164302_119265551	3300012961	Soil	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSATQAKSLVDDQFAALRDSNGVGDLAYQKLPAFSVEKVSLDAYKMITAGI
Ga0126369_103905422	3300012971	Tropical Forest Soil	MIDGAIYLLSRRVQGDHGESFVQNVTVFASSAAQARTLVDHEFAALRSSNAARAYQVQPAFSVERVSLDAPKMITAGITTY*
Ga0126369_125905592	3300012971	Tropical Forest Soil	MKDGSIYLLSRRVQGDHGESYMQNVTVFASDAAQAKSLVDQQFAAFREADRGHERAYQALPKFSVEQVKLDEYKMITAGVTQY*
Ga0134077_101048723	3300012972	Grasslands Soil	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSATQAKSLVDDQFAALRKSNGARDLAYQKLPEFSVEKVSLDVYKMITAGITTY*
Ga0164309_106837442	3300012984	Soil	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSATQAKSLVDDQFAALRQSNGVRDLAYQKLPAFSVEKVSLDAYKMITAGITTY*
Ga0164308_104467972	3300012985	Soil	MIDGAIYLLSRRVRGDHGESFMQNVTVFASSPAQARSLVDAQFATMRRSNESAYQAQPEFSVEKISLDAHKMITAGITTY*
Ga0164304_111227742	3300012986	Soil	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSATQAKSLVDDQFAALRDSNGVGDLAYQKLPAFSVEKVSLDAYKMITAGITTY*
Ga0163163_117640712	3300014325	Switchgrass Rhizosphere	MKDGAIFLLSRRVQGDHGESYMQNVTVFASDATQAKSLVDQQFAAFRQTDRGHERAYQVLPKFSVEQV
Ga0157380_115794891	3300014326	Switchgrass Rhizosphere	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAQSLVDDQFAALRKTATGRERAYQPVPKFSIERVSLDDYKMITAGVTKY*
Ga0132258_111786992	3300015371	Arabidopsis Rhizosphere	MKDGAIYLLSRRVQGDHGESYVQNVSVFANSAAQAISLVDDQFASLRKTARGHERAYQSAPKFSVEQVSLENYKMITAGITKY*
Ga0132258_116926013	3300015371	Arabidopsis Rhizosphere	MKDGAIFLLSRQVQGDHGESYMQNVTVFASDAAQAKSLVDQQFAAFRQADRGHERAYQVLPKFSVEQVKLDEYKMITAGVTQY*
Ga0132258_119079532	3300015371	Arabidopsis Rhizosphere	MKDGSIFLLSRQVQGDHGESYMQNVTVFASSAAQAKSLVDDQFAAFRMADRGHERAYQVLPKFSVEKVSLDEYKMITAGITTY*
Ga0132258_138850991	3300015371	Arabidopsis Rhizosphere	MKDGSIFLLSRRVKGDHGESYMQNVTVFASDAKQAKSLVDDQFAALRRADRSRERAYQALPEFAVEKVSLEEYKMITAGITTY*
Ga0132257_1008988382	3300015373	Arabidopsis Rhizosphere	MKDGSIFLLSRQVQGDHGESYMQNVTVFASSAAQAKSLVDDQFAAFRQADRGHERAYQPLPKFSVEKVSLDEYKMITAGITTY*
Ga0132255_1005737544	3300015374	Arabidopsis Rhizosphere	MKDGSIFLLSRQVQGDHGESYMQNVTVFASSAAQAKSLVDDQFAAFRMADRGHERAYQVLPKFSVEKV
Ga0132255_1047472582	3300015374	Arabidopsis Rhizosphere	MIDGAIYLLSRQVRGDHGESFMQNVTVFASSPAEARSLVNAQFATMRRSNESAYQAQPEFSVEKISLDAHKMITAGITTY*
Ga0134083_100526562	3300017659	Grasslands Soil	MKDGAIYLLSRQVKGVHGESYMQNVTVFANSSTQAKSLVDDQFAALRKWSSVGELAYQKLPEFSVEKVTLDAYKMITAGITAY
Ga0184608_100217502	3300018028	Groundwater Sediment	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAVKAQSLVDDQFAALRKTARGREHAYQPVPKFSVEKVSLEDYKMITAGVTKY
Ga0184634_102058762	3300018031	Groundwater Sediment	MKAGAIYLLSRQVQGDHGELYMQNVTVFAPRAAQAKSIVEEQFAALRKTGSLRERAYQPVPEFSAEKVSLEDYKMITAGVTT
Ga0184634_105535481	3300018031	Groundwater Sediment	MKAGAIYLLSRQVKGDHGESYMQNVTVFANSAVKAQSLVDDQFAALRKTARGREHAYQPVPKFSVEKVSLEDYKMITAGITTY
Ga0184621_101219392	3300018054	Groundwater Sediment	MKDGAIYLLSRKVNGDHGEPYMQNVTVFANTAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVEKVSLEDYKMITAGVTKY
Ga0184635_100452283	3300018072	Groundwater Sediment	MKDGAIYLLSRQVQGDHGERYMQNVTVFAPSAAQAKSIVEEQFAALRKTGSLRERAYQPVPEFSAEKVSLEDYKMITAGVTT
Ga0184635_101363922	3300018072	Groundwater Sediment	MRAGAIYLLSRQVKGDHGESYMQNVTVFANSAVKAQSLVDDQFAALRKTARGREHAYQPVPKFSVEKVSLEDYKMITAGVTKY
Ga0184624_101694912	3300018073	Groundwater Sediment	MKAGAIYLLSRQVQGDHGELYMQNVTVFAPSAAQAKSIVEEQFAALRKTGSLRERAYQPVPEFSAEKVSLEDYKMITAGVTT
Ga0184640_101676793	3300018074	Groundwater Sediment	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVEK
Ga0184640_102589422	3300018074	Groundwater Sediment	MKAGAIYLLSRQVNGDHGESYMQNVTVFANSAVKAQSLVDDQFAALRKTARGREHAYQPVPKFSVEKVSLEDYKMITAGITKY
Ga0184609_102409642	3300018076	Groundwater Sediment	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSLEDYKMITAGVTKY
Ga0184625_103127912	3300018081	Groundwater Sediment	MKDGAIYLLSRQVQGDHGELYMQNVTVFAPSAAQAKSIVEEQFAALRKTGSLRERAYQPVPEFSAEKVSLEDYKMITAGVTT
Ga0184628_102511652	3300018083	Groundwater Sediment	MKAGAIYLLSRKVNGDHGEPYMQNVTVFANSAAQAKSLVDDQFASLRKGTRTQERAYQVLPVFSVEKVSLEEYKMITAGITRY
Ga0066669_105011652	3300018482	Grasslands Soil	MKDGAIYLLSRQVKGVHGESYMQNVTVFANSSTQAKSLVDDQFAALRKSSSVGDLAYQKLPEFSVEKVTLDAYKMITAGITAY
Ga0066669_110325201	3300018482	Grasslands Soil	MKDGAIYLLSRKVNGDHGEPYMQNVTVFASSAAQAKSLVDDQFAALRKTARGRERAYQPVPKFSVEK
Ga0173479_100467244	3300019362	Soil	MIDGAIYLLSRRVRGDHGESFMQNVTVFASSPAQARSLVNAQFATMRRSNESAYQAQPEFSVEKI
Ga0193700_10310011	3300019873	Soil	IYRLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSLEDYKMITAGVTKY
Ga0193697_10509032	3300020005	Soil	MKDGAIYLLSRKVNGDHGEPYMQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSLEDYKMITAGVTKY
Ga0193696_10253661	3300020016	Soil	MKDGAIYLLSRNVNGDHGEPYMQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVEKVSLEDYKMITAGVTKY
Ga0222621_10745192	3300021510	Groundwater Sediment	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSLEDYKMITAGVTK
Ga0222624_13042291	3300021951	Groundwater Sediment	GAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSLEDYKMITAGVTKY
Ga0222623_103090752	3300022694	Groundwater Sediment	MKAGAIYLLSRQVKGDHGESYMQNVTVFANSAVKAQSLVDDQFAALRKTARGREHAYQPVPKFSVEKVSLEDYKMITAGITKY
Ga0222622_100755101	3300022756	Groundwater Sediment	MKAGAIYLLSRQVNGDHGESYMQNVTVFANSAVQAQSLVDDQFAALRKTARGREHAYQPVPKFSVEKVSLEDYKMITAGITT
Ga0222622_104247792	3300022756	Groundwater Sediment	LFRKLNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVEKVSLEDYKMITAGVTKY
Ga0207642_104619502	3300025899	Miscanthus Rhizosphere	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAQSLVDDQFAALRKTATGRERAYQPVPKFSIERVSLDDYKMITAGVTKY
Ga0207693_103754892	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKDGAIYLLSRQVQGDHGESYVQNVSVFANSAAQAISLVDDQFASLRKTARGHERAYQPVPKFSVEQVS
Ga0207663_107074021	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKDGAIYLLSRQVQGDHGESYVQNVSVFANSAAQAISLVDDQFASLRKTARGHERAYQPVPKFSVEQVSLEDYKMITAGITKY
Ga0207649_100665894	3300025920	Corn Rhizosphere	MKSGAIYLLSRQVHGDHGESYMQNVTVFAESADQAKYLVDDQFSALRQGGRLAHERAYQKLPEFSVEKVSLEEYKMISAGITTY
Ga0207706_101905073	3300025933	Corn Rhizosphere	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAQSLVDDQFAALRKTATGRERAYQPVPKFSVERVSLDDYKMITAGVTKY
Ga0207661_104730023	3300025944	Corn Rhizosphere	MKDGAIFLLSRRVQGDHGESYMQNVTVFASDATQAKSLVDQQFAAFRQTDRGHERAYQVLPKFSVEQVKLDEYKMITAGITTY
Ga0209470_10108548	3300026324	Soil	MKDGAIYLLSREVKGVHGESYMQNVTVFANSSTQAKSLVDDQFAALRKSSSVGDLAYQKLPEFSVEKVTLDAYKMITAGITAY
Ga0209811_100526522	3300027821	Surface Soil	MIDGAIYLLSRQVRGDHGESFMQNVTVFASSAAQAVSLVDDQFASLRKTERGRERAYQPVPKFSVEKVSLEDYKMITAGITFY
Ga0307291_10066145	3300028707	Soil	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVEKVSLEDYKMITAGVTKY
Ga0307287_100807421	3300028796	Soil	VNGDHVEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSLEDYKMITAGVTKY
Ga0307284_102765912	3300028799	Soil	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSL
Ga0307278_101496243	3300028878	Soil	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSARQAKSLVDDQFAALRQSNGVRDLAYQKLPEFSVEKVSLDVYKMITAGITTY
Ga0247826_107528532	3300030336	Soil	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSATQAKSLVDDQFAALRQSNGVRDLAYQKLPAFSVEKVSLDAYKMITAGITTY
Ga0308190_11318942	3300030993	Soil	VNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSLEDYKMITAGVTKY
Ga0308189_103666682	3300031058	Soil	DGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVERVSLEDYKMITAGVTKY
Ga0307501_102380901	3300031152	Soil	KVNGDHGEPYMQNVTVFASSAAQAKSLVDDQFAALRKTATGRERAYQPVPEFSVEKVSLEDYKMITAGITKY
Ga0307498_100002217	3300031170	Soil	MKAGAIYLLSRKVNGDHGEPYMQNVTVFASSAAQAKSLVDDQFAALRKTATGRERAYQPVPEFSVEKVSLEDYKMITAGITKY
Ga0307497_103547892	3300031226	Soil	MKDGSIYLLSRQVTGDHGESYMQNVTVFASSAVQAQSLVDDQFAAFRKTARGREHAYQPVPKFSVEKVSLEDYKMITAGITFY
Ga0308194_100411361	3300031421	Soil	MKDGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSLERVSLEDYKMITAGVTKY
Ga0307469_111120521	3300031720	Hardwood Forest Soil	MKDGDIYLLSRKVQGDHGEPYMQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVEKVSLEDYKMITAGVTKY
Ga0307472_1004050183	3300032205	Hardwood Forest Soil	MKAGAIYLLSRKVNGDHGEPYVQNVTVFANSAAQAKSLVDEQFAALRKTATGRERAYQPVPKFSVEKVSLEDYKMITAGITRY
Ga0247829_112774691	3300033550	Soil	MKDGAIYLLSRQVKGDHGESYMQNVTVFANSATQAKSLVDDQFAALRKSNAVRDLAYQKLPAFSVEKVSLDAYKMITAGITTY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074854

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences