Metagenome / Metatranscriptome Family F074852

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074852
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	80 residues
Representative Sequence	VLEHPDLELDVVRSSQLKFPLTDPLFRIAALAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRTD
Number of Associated Samples	102
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.52 %
% of genes near scaffold ends (potentially truncated)	97.48 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (31.933 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.62% β-sheet: 16.19% Coil/Unstructured: 56.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04079	SMC_ScpB	25.21
PF07676	PD40	13.45
PF08241	Methyltransf_11	2.52
PF07690	MFS_1	2.52
PF02616	SMC_ScpA	2.52
PF13586	DDE_Tnp_1_2	1.68
PF08818	DUF1801	1.68
PF01230	HIT	0.84
PF00892	EamA	0.84
PF08031	BBE	0.84
PF00440	TetR_N	0.84
PF12681	Glyoxalase_2	0.84
PF00903	Glyoxalase	0.84
PF00856	SET	0.84
PF10604	Polyketide_cyc2	0.84
PF08281	Sigma70_r4_2	0.84
PF09362	DUF1996	0.84
PF07007	LprI	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1386	Chromosome segregation and condensation protein ScpB	Transcription [K]	25.21
COG1354	Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family	Replication, recombination and repair [L]	2.52
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.68
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.68
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.68
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.84
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.44 %
Unclassified	root	N/A	2.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	92.44 %
Unclassified	root	N/A	2.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	74.79 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.52 %
Unclassified	root	N/A	2.52 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	69.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.52 %
Unclassified	root	N/A	2.52 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	1.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.84 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.84 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.84 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.52 %
Unclassified	root	N/A	2.52 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	1.68 %
Dermacoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	0.84 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.84 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.84 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.52 %
Unclassified	root	N/A	2.52 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	1.68 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.84 %
Rudaeicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Rudaeicoccus	0.84 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.84 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	69.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.52 %
Unclassified	root	N/A	2.52 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1.68 %
Rudaeicoccus suwonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Rudaeicoccus → Rudaeicoccus suwonensis	0.84 %
Nocardioides albidus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides albidus	0.84 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.84 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_13196537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300001536\|A1565W1_10987787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1248	Open in IMG/M
3300001537\|A2065W1_10335012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2309	Open in IMG/M
3300001664\|P5cmW16_1032580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	971	Open in IMG/M
3300004081\|Ga0063454_101105364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300004153\|Ga0063455_101405182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300004479\|Ga0062595_101070313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300004643\|Ga0062591_102444727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300005174\|Ga0066680_10339507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300005176\|Ga0066679_10145993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1477	Open in IMG/M
3300005181\|Ga0066678_10507994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300005347\|Ga0070668_101136839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300005356\|Ga0070674_100432335	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005367\|Ga0070667_101675900	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300005438\|Ga0070701_10737463	Not Available	666	Open in IMG/M
3300005445\|Ga0070708_100812407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300005445\|Ga0070708_101858658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300005526\|Ga0073909_10328710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300005526\|Ga0073909_10682861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300005536\|Ga0070697_101475491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300005545\|Ga0070695_101511249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005549\|Ga0070704_100249762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1456	Open in IMG/M
3300005552\|Ga0066701_10415825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300005575\|Ga0066702_10342374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	910	Open in IMG/M
3300006574\|Ga0074056_11717629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300006579\|Ga0074054_11929353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300006800\|Ga0066660_11140789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300006845\|Ga0075421_100062412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4708	Open in IMG/M
3300006847\|Ga0075431_100244930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1822	Open in IMG/M
3300006854\|Ga0075425_100467461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1452	Open in IMG/M
3300006854\|Ga0075425_101254276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae → Rudaeicoccus → Rudaeicoccus suwonensis	841	Open in IMG/M
3300006914\|Ga0075436_101308487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	548	Open in IMG/M
3300007255\|Ga0099791_10164366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300009012\|Ga0066710_102030502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300009012\|Ga0066710_103678761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300009093\|Ga0105240_12616681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300009094\|Ga0111539_11360722	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300009137\|Ga0066709_102143974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300009148\|Ga0105243_10528021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300009148\|Ga0105243_11322842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300009176\|Ga0105242_11759346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300009176\|Ga0105242_12446799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300009177\|Ga0105248_13432413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300009551\|Ga0105238_12677661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300009837\|Ga0105058_1166161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300010043\|Ga0126380_11306067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300011271\|Ga0137393_10339874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1281	Open in IMG/M
3300012096\|Ga0137389_10375557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M
3300012199\|Ga0137383_11045555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300012204\|Ga0137374_10351266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1189	Open in IMG/M
3300012206\|Ga0137380_10652457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300012209\|Ga0137379_10819704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300012353\|Ga0137367_10671551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300012355\|Ga0137369_10903267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300012358\|Ga0137368_10183596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1506	Open in IMG/M
3300012360\|Ga0137375_10987312	Not Available	663	Open in IMG/M
3300012532\|Ga0137373_10217252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1563	Open in IMG/M
3300012532\|Ga0137373_10739033	Not Available	731	Open in IMG/M
3300012923\|Ga0137359_10809066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300012927\|Ga0137416_11910974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300012960\|Ga0164301_10983142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300012960\|Ga0164301_11379584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300012986\|Ga0164304_11036777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300012989\|Ga0164305_10532919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300013296\|Ga0157374_10960518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300013501\|Ga0120154_1001008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10765	Open in IMG/M
3300013764\|Ga0120111_1098687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300013765\|Ga0120172_1023485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1774	Open in IMG/M
3300013768\|Ga0120155_1175615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300014052\|Ga0120109_1012054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1902	Open in IMG/M
3300014969\|Ga0157376_11670808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300015373\|Ga0132257_100348483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1790	Open in IMG/M
3300018028\|Ga0184608_10351535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300018066\|Ga0184617_1217375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300018071\|Ga0184618_10329128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300018071\|Ga0184618_10369310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300018433\|Ga0066667_10179254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1532	Open in IMG/M
3300018433\|Ga0066667_11937052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300018482\|Ga0066669_11859149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300019869\|Ga0193705_1015238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1676	Open in IMG/M
3300019875\|Ga0193701_1101562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300021080\|Ga0210382_10320322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300021418\|Ga0193695_1056881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300025913\|Ga0207695_11653434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300025939\|Ga0207665_10828989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300025944\|Ga0207661_11751647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300025972\|Ga0207668_11239497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300026326\|Ga0209801_1214703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300026328\|Ga0209802_1330443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300027846\|Ga0209180_10058443	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300027909\|Ga0209382_10226704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2131	Open in IMG/M
3300028705\|Ga0307276_10021390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1272	Open in IMG/M
3300028707\|Ga0307291_1147437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300028710\|Ga0307322_10130622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300028711\|Ga0307293_10045419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1357	Open in IMG/M
3300028711\|Ga0307293_10065947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1135	Open in IMG/M
3300028711\|Ga0307293_10192792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300028715\|Ga0307313_10253268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300028716\|Ga0307311_10088035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides albidus	858	Open in IMG/M
3300028718\|Ga0307307_10185917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300028718\|Ga0307307_10207313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300028720\|Ga0307317_10328059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300028744\|Ga0307318_10311450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300028755\|Ga0307316_10394442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300028778\|Ga0307288_10014522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2465	Open in IMG/M
3300028799\|Ga0307284_10371591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300028807\|Ga0307305_10070965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1607	Open in IMG/M
3300028819\|Ga0307296_10044010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2355	Open in IMG/M
3300028819\|Ga0307296_10346244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300028824\|Ga0307310_10280685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300028824\|Ga0307310_10380772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300028828\|Ga0307312_10491299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300028828\|Ga0307312_10499832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300028878\|Ga0307278_10528550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300028884\|Ga0307308_10178497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1017	Open in IMG/M
3300028885\|Ga0307304_10086307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1231	Open in IMG/M
3300028885\|Ga0307304_10486113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300031226\|Ga0307497_10392001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300031740\|Ga0307468_102516821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.51%
Host-Associated	Host-Associated	18.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.31%
Plants	Host-Associated → Plants	18.49%
Aquatic	Environmental → Aquatic	4.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.65%
Sediment	Environmental → Aquatic → Sediment	3.36%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	8.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.84%
Sand	Environmental → Terrestrial → Soil → Sand	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.84%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	28.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.04%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.68%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_131965372	3300000891	Soil	EYESEQHFRSVLEHPELELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRAS*
A1565W1_109877872	3300001536	Permafrost	PELELDVVRSSQLRFPVTDPLFRIAAAAHLIKREQLPEIYLRLPLRLRGARRALGVPIPGYRWVEATGRRRA*
A2065W1_103350121	3300001537	Permafrost	LEHPELELDVVRSSQLRFPVTDPLFRIAAAAHLIKREQLPEIYLRLPLRLRGARRALGVPIPGYRWVEATGRRRA*
P5cmW16_10325802	3300001664	Permafrost	VLEHPDLELDVVRSSQLKFPLTDPLFRIAALAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRTD*
Ga0063454_1011053641	3300004081	Soil	EQQFRDVLTHPALELDVVRSSQLKAPLTDLVFRVAALSRVLKRERLPELYLNLPKWVAGARRATGIPIPGYRWVEAVGRKR*
Ga0063455_1014051822	3300004153	Soil	VVRSSQLKAPLTDLGFRIAALAHLIKRERLPELYLELPGWVTKARRVTGIPIPGYRWVEATGVKATADPPG*
Ga0062595_1010703132	3300004479	Soil	EAQFRSVLEHPQLRFDVVRSSQLKAPLTDLAFRVAAIAHLVGRERLPRLYLDLPGWVAKARRATGVPIPGYRWVEAAGIKATADRAG*
Ga0062591_1024447272	3300004643	Soil	FDVVRSSQLKAPLTDLAFRVAAVAHLVKREGLPRLYLDLPGWLTNVRRATGVPIPGYRWVEAAGVKATADRAG*
Ga0066680_103395073	3300005174	Soil	LKFGLTDFILRMAALARIVKRERLPVLYLQLPAWVASARRSIGVPIPGYRWVEATGRKQLP*
Ga0066679_101459933	3300005176	Soil	FSAALEHPQLEFDVVRSSQLKFPLTDFVLRTAATARIVKTERLPELYVRGPAWLARARRLVSVPIPGYRWVEAAGHKPA*
Ga0066678_105079943	3300005181	Soil	HPELELEVVRSSQLKFGLTDFILRMAALARIVKRERLPVLYLQLPAWVASARRSIGVPIPGYRWVEATGRKQLP*
Ga0070668_1011368392	3300005347	Switchgrass Rhizosphere	MREYESEEHFRSVLAHPELEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL*
Ga0070674_1004323353	3300005356	Miscanthus Rhizosphere	EYESEEHFRSVLAHPELEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL*
Ga0070667_1016759001	3300005367	Switchgrass Rhizosphere	LDPTHMREYESEEHFRSVLAHPELEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL*
Ga0070701_107374631	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LEFDVVRSNQLKFPLTDFMFRIASVAHLVKRERLPELYLNLPGWVARARRGTGIPIPGYRWVEASGRKR*
Ga0070708_1008124071	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLEHPELELGVVRSSQLKFPLTDPLFRIAALARLIKREQLPEIYLRLPRRLRGVRRALGVPIPGYRWVEATGHKL*
Ga0070708_1018586581	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	WQLDPTHMREYESEQQFREVLTHPDLELDVVRSSQLKAPLTDLVFRIGAVAHLIRRERLPELYLNLPAWVSRARRATGIPIPGYRWVEATGRRK*
Ga0073909_103287102	3300005526	Surface Soil	REYESEEHFRSVLTHPELEFDVVRSSQLKFPLSDFVFRVAAVAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKRTS*
Ga0073909_106828611	3300005526	Surface Soil	EYESEEHFRSVLTHPELEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKRTS*
Ga0070697_1014754912	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LVLEQPELDLDVVRSSQLKFPLTDPLFRIAAVAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGHRRAS*
Ga0070695_1015112492	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PTHMREYASEQDFRAVLEHPQLEFDVVRSNQLKFPLTDFMFRIASVAHLVKRERLPELYLNLPGWVARARRGTGIPIPGYRWVEASGRKR*
Ga0070704_1002497621	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	PTHMREYESEEQFRSVLEHPGLRFDVVRSSQLKAPLTDLMFRVVALAHLVKRERLPGLYLELPDWVSTARRATGVPIPGYRWVEAAGVKATADRAG*
Ga0066701_104158251	3300005552	Soil	WQLDPTHMREYESEEHFRSALAHPELEFDLVRSSQLKFPLTDPLFRIAALAHLIKREQLPEIYLRLPRRLRGARRTLGVPIPGYRWVEATGHRL*
Ga0066702_103423742	3300005575	Soil	MREYESEEHFRAALEHPELELDVVRSAQLKFPLTDFVLRTAATARLVKTEDLPEAYLRGPRWLVRARRAIGIPIPGYRWVEATGRKRQ*
Ga0074056_117176291	3300006574	Soil	EHFRSVLAHPELEFDVVRSSQLKFPLSDFVFRAAALAHVVPRAKLPELYLNLPPWVAKARRTVGVPIPGYRWVEATGRKRTS*
Ga0074054_119293532	3300006579	Soil	VVRSSQLKFPLSDFVFRAAALAHIVPRSKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL*
Ga0066660_111407891	3300006800	Soil	THMREYESETHFRSALEHPGLELDVVRSSQLKFPLTDPLFRIAAKARLLDRAQLPEIYLRLPHALRGARRTLGVPIPGYRWVEATGHRL*
Ga0075421_1000624121	3300006845	Populus Rhizosphere	FRAALEHPELELDVVRSNRLKFPVTDPLFRAAAAAGLIGRDEVPEIYLRLPRRLRGLRRTVAVPIPGYRWVEATGRKRAPHS*
Ga0075431_1002449303	3300006847	Populus Rhizosphere	VVRSSQLKAPLTDLAFRVAAIAHLVGRERLPRLYLDLPGWVAKARRATGVPIPGYRWVEAAGVKATADRAG*
Ga0075425_1004674611	3300006854	Populus Rhizosphere	SVLEHPQLRFDVVRSSQLKAPLTDLAFRVAAIAHLVGRERLPRLYLDLPGWVAKARRATGVPIPGYRWVEAAGVKATADRAG*
Ga0075425_1012542762	3300006854	Populus Rhizosphere	PELELDVVRSNRLKFPVTDPLFRAAAAAGLIGRDEVPEIYLRLPRRLRGLRRTVAVPIPGYRWVEATGRKRAPHS*
Ga0075436_1013084871	3300006914	Populus Rhizosphere	WQLDPTHMREYASEAEFRAALEHPELELDVVRSNRLKFPVTDPLFRAAAAAGLIGRDEVPEIYLRLPRRLRGLRRTVAVPIPGYRWVEATGRKRAPHS*
Ga0099791_101643661	3300007255	Vadose Zone Soil	VLEHPDLELDVVRSSRLKFPLTDPLFRIAALAHVIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKK*
Ga0066710_1020305022	3300009012	Grasslands Soil	EQHFRSVLEHPELEFDVVRSSQLRFPLTDPLFRIAALAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRAS
Ga0066710_1036787611	3300009012	Grasslands Soil	DEFRAVLTHPELEFDAVRSSQLKFPLTDFADRTAASARLISPERLPELYVKGPTWLAKARRTIGVPIPGYRWVEATGRKRAL
Ga0105240_126166811	3300009093	Corn Rhizosphere	RSVLAHPELEVDVVRSSQLKFPLSDLVFRVAALARVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL*
Ga0111539_113607221	3300009094	Populus Rhizosphere	LEFDVVRSNQLKFPLTDFTFRIAAVAHLIKRERLPELYLNLPHWVARARRATGVPIPGYRWVEAAGRKRT*
Ga0066709_1021439742	3300009137	Grasslands Soil	DVVRSSQLKFPLTDPMFRIAALAHLIKREQLPEIYLRLPHRLRGARRALGVPIPGYRWVEATGHKRG*
Ga0105243_105280213	3300009148	Miscanthus Rhizosphere	HFRSVLAHPELEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKRTS*
Ga0105243_113228422	3300009148	Miscanthus Rhizosphere	HFRSVLAHPELEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL*
Ga0105242_117593461	3300009176	Miscanthus Rhizosphere	HMREYESEEHFRSVLAHPELEFDVVRSSQLKFPLSDFVLRPAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKRTS*
Ga0105242_124467991	3300009176	Miscanthus Rhizosphere	HFRSVLEHPGLELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRAS*
Ga0105248_134324131	3300009177	Switchgrass Rhizosphere	LQLDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRAS*
Ga0105238_126776611	3300009551	Corn Rhizosphere	SEEHFRSVLAHPELEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL*
Ga0105058_11661611	3300009837	Groundwater Sand	LDPTHMREYESEEHFRSVLEHPELSFDVVRSNQLKFPLTDPLFRIAAVARLIKREQLPEIYLRLPRRLRGMRRAIAVPIPGYRWVEATGRKRAS*
Ga0126380_113060672	3300010043	Tropical Forest Soil	YVSEDEFRSALDHPALELDVVRSSHLKFPVTDPLFRAAAAAGLIGRDELPEIYLRLPRTLRGLRRTVAVPIPGYRWVEAAGRKRDP*
Ga0137393_103398742	3300011271	Vadose Zone Soil	THMREYESEAHFRSALEHPGLELDVVRSSQLKFPLTDPLFRIAAKARLFDRAELPEIYLRLPRALRGARRTLGVPIPGYRWVEATGHKRG*
Ga0137389_103755572	3300012096	Vadose Zone Soil	REYESEAHFRSTLEHPGLELDVVRSSQLKFPLTDPLFRIAAKARLLDRAELPEIYLRLPRALRGARRTLGVPIPGYRWVEATGHKRG*
Ga0137383_110455551	3300012199	Vadose Zone Soil	PHLELEVVRSSQLKFPLTDPLFRIAALARIIKREQLPEIYLRLPHRLQGARRAFGVPIPGYRWVEAVGRKRTD*
Ga0137374_103512662	3300012204	Vadose Zone Soil	RSVLEHPQLEFGVVRSSKLKAPLTDLVFRIAALTHVLKRERLPQLYLNLPGWVPRARRATGIPIPGYRWVEATGRKRGT*
Ga0137380_106524571	3300012206	Vadose Zone Soil	SEEHFRDALAHPDLEFDVVRSSQLKAPLTDFGFRIAALAHLIKRERLPELYLQLPRWVARARRATGVPIPGYRWVEATGHKRAS*
Ga0137379_108197042	3300012209	Vadose Zone Soil	VVRSSQLKFPLTDPLFRIAALARIIKREQLPEIYLRLPHRLQGARRAFGVPIPGYRWVEAVGRKRTD*
Ga0137367_106715511	3300012353	Vadose Zone Soil	MREYESEVQFRSVLAHPDLELDVVRSAQLKAPLTDLVFRLAALARLVKRERLPELYLHAPKWVAQARSATGVPIPGYRWVEATGRKRVS*
Ga0137369_109032672	3300012355	Vadose Zone Soil	FDVVRSSQLKFPLTDFVLRMAALARLVRREALPELYLNLPSWAGRLRRTIGVPIPGYRWVEATGRKRAS*
Ga0137368_101835963	3300012358	Vadose Zone Soil	WQLDPTHMREYESEAQFRSVLEQPQLELDVVRSSQLKAPLTDLAFRVAALARVLKRERLPELYLNLPNWVSRARRATGIPIPGYRWVEATGRKRAG*
Ga0137375_109873121	3300012360	Vadose Zone Soil	ELELDVVRSSQLKAPLTDLAFRIAALGRLIKRERLPELYLNLPKWVSSARRATGVPIPGYRWVEATGRKPLEPPRA*
Ga0137373_102172521	3300012532	Vadose Zone Soil	AHPDLELDVVRSAQLKAPLTDLVFRLAALARLVKRERLPELYLHAPKWVAQARSATGVPIPGYRWVEATGRKRLS*
Ga0137373_107390331	3300012532	Vadose Zone Soil	VVRSSQLKAPLTDLVFRIGALARVIKRERLPELYLNLPKWVAGARRATGIPIPGYRWVEAAGRKRAS*
Ga0137359_108090661	3300012923	Vadose Zone Soil	EHPELELDVVRSSQLKFPLTDPLFRVAAKARLLDRAELPEIYLRLPRALRGARRTLGVPIPGYRWVEATGHKRG*
Ga0137416_119109741	3300012927	Vadose Zone Soil	KLEFDVVRSSQLKFPLTDPLFRIAAMARLVKREHLPEIYLRLPRRLRGARRALAVPIPGYRWVEATGRKRAS*
Ga0164301_109831421	3300012960	Soil	DPTHMREYESEEHFRSVLAHPELEFDVVRSSQLKFPLSDFVFRAAALAHVVPRAKLPELYLNLPPWVARARRAVGVPIPGYRWVEATGRKRTS*
Ga0164301_113795842	3300012960	Soil	QLGFDVVRSSQLKAPLTDLAFRVAAVAHLVKRERLPGLYLDLPSWVTKARRATGVPIPGYRWVEATGTKRGFNDA*
Ga0164304_110367772	3300012986	Soil	VVRSSQLKFPLTDFVLRAAAVARVLRNDQLPELYQHGPRWLGRARRAIGVPIPGYRWVEATGRKRGE*
Ga0164305_105329192	3300012989	Soil	LEFDVVRSSQLKFPLSDFVFRAAALAHVLPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKRTS*
Ga0157374_109605183	3300013296	Miscanthus Rhizosphere	MREYESEDQFRSVLEQPELELDVVRSSQLKFPLTDPLFRIAAMAHLIKRAELPEIYLRLPRRLRGARRALGVPIPGYRWVEA
Ga0120154_100100814	3300013501	Permafrost	VLEHPDLELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGIPIPGYRWVEATGRKRVS*
Ga0120111_10986872	3300013764	Permafrost	HPDLELDVVRSSQLKFPLTDPLFRIAALAHLIKREQLPEIYLRLPRRLLGARHALGVPIPGYRWVEATGHKRAS*
Ga0120172_10234853	3300013765	Permafrost	REYESEQHFRSVLEHPELELDVVRSSQLRFPVTDPLFRIAAAAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRVS*
Ga0120155_11756151	3300013768	Permafrost	VLEHPELELDVVRSSQLKFPLTDPLFRIAAAAHLIKRDQLPEIYLRLPRRLRGARRVLGVPIPGYRWVEATGRKRGE*
Ga0120109_10120541	3300014052	Permafrost	EHFRSVLEHPDLQLDAVRSSQLKFPLTDPLFRIAALAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRTD*
Ga0157376_116708082	3300014969	Miscanthus Rhizosphere	SEEHFRSVLAHPELEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYSWVEATGRKL*
Ga0132257_1003484833	3300015373	Arabidopsis Rhizosphere	LDVVRSSQLKAPLTDLVFRVGALTHLVERERLPELYLNLPPWVTKTRRATGIPIPGYRWVEATGVKATADPAG*
Ga0184608_103515352	3300018028	Groundwater Sediment	LELDVVRSSQLKAPLTDLAFRVGAMAHVIKRERLPELYLNLPRWVSSARRATGVPIPGYRWVEAAGRRR
Ga0184617_12173752	3300018066	Groundwater Sediment	DVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRE
Ga0184618_103291281	3300018071	Groundwater Sediment	SEEHFRSVLEHPALELDVVRSSQLKFPLTDPLFRIAALAHLIKRDQLPEIYLRLPRRLRGARRTLGVPIPGYRWVEATGRRRVS
Ga0184618_103693102	3300018071	Groundwater Sediment	SEEHVRSVLEHPELELDVVRSSQLKFPLTDPLFRIAALAHVIKREQLPEIYLRLPHRLRGARRALGVPIPGYRWVEATGRKRIN
Ga0066667_101792542	3300018433	Grasslands Soil	ELDVVRSSQLKFPLTDPLFRIAALAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRTN
Ga0066667_119370522	3300018433	Grasslands Soil	EAQFRSVLEHPQLRFGVVRSSRLKAPLTDLAFRVAEMSHLVERERLPRLYLDLPGWVTNVRRATGVPIPGYRWVEAAGVKATADRAG
Ga0066669_118591492	3300018482	Grasslands Soil	MREYASEAQFRSVLEHPQLRFDVVRSSRLKAPLTDLAFRVAAIARLVERERLPRLYLDLPGWVTNARGVTGVPIPGYRWVEAAGVKATADRAG
Ga0193705_10152381	3300019869	Soil	SSQLKFPLSDFVFRVAALARLVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRRRTS
Ga0193701_11015622	3300019875	Soil	SEQHFRSVLEHPELELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKPA
Ga0210382_103203221	3300021080	Groundwater Sediment	DPTHMREYESEEHFRSVLEHPELELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKK
Ga0193695_10568812	3300021418	Soil	HPELEFDVIRSSQLKFPLTDPLFRIAALAHVIKREQLPEIYLRLPRRLRGARRTLGVPIPGYRWVEAAGRKRSS
Ga0207695_116534342	3300025913	Corn Rhizosphere	RSVLAHPELEVDVVRSSQLKFPLSDLVFRVAALARVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL
Ga0207665_108289893	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LEHPELRFDVVRSSQLKAPLTDLGFRVAALAHLIKRERLPELYLELPGWVTKARRVTGIPIPGYRWVEATGVRATADPGG
Ga0207661_117516472	3300025944	Corn Rhizosphere	LDPTHMREYESGDQFRSVLEQPELELDVVRSSQLKFPLTDPLFRIAAMAHLIKRAELPEIYLRLPRRLRGARRALGVPIPGYRWVEATGHRRAS
Ga0207668_112394972	3300025972	Switchgrass Rhizosphere	LEFDVVRSSQLKFPLSDFVFRVAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKL
Ga0209801_12147031	3300026326	Soil	HPELELEVVRSSQLKFGLTDFILRMAALARIVKRERLPVLYLQLPAWVASARRSIGVPIPGYRWVEATGRKQLP
Ga0209802_13304432	3300026328	Soil	LKFGLTDFILRMAALARIVKRERLPVLYLQLPAWVASARRSIGVPIPGYRWVEATGRKQL
Ga0209180_100584434	3300027846	Vadose Zone Soil	VVRSSQLKFPLTDPLFRIAAKARLLDRAELPEIYLRLPRALRGARRTLGVPIPGYRWVEATGHKRG
Ga0209382_102267041	3300027909	Populus Rhizosphere	FRAALEHPELELDVVRSNRLKFPVTDPLFRAAAAAGLIGRDEVPEIYLRLPRRLRGLRRTVAVPIPGYRWVEATGRKRAPHS
Ga0307276_100213901	3300028705	Soil	DVVRSSQLKAPLTDLVFRVAALAHLVKRERLPELYLELPRWVSSARRATGVPIPGYRWVEATGTRRSSAD
Ga0307291_11474371	3300028707	Soil	PELELDVVRSSQLKAPLTDLAFRIGAMAHVIKRERLPELYLNLPKWVSSARRATGVPIPGYRWVEATGRKRAA
Ga0307322_101306221	3300028710	Soil	EFDVVRSSQLKFPLSDFVFRAAALAHVVPRSKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKRTS
Ga0307293_100454191	3300028711	Soil	HPELELDVVRSSQLKFPLTDPLFRIAAAAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKISSDLPR
Ga0307293_100659471	3300028711	Soil	DVLTQPELELDVVRSSQLKAPLTDLAFRIAALARVIKRERLPELYLNLPTWVSSARRATGIPIPGYRWVEATGRKRE
Ga0307293_101927922	3300028711	Soil	EQQFRDVLTQSELELDVVRSSQLKAPLTDLAFRIAAMAHVVKRERLPELYLNLPNWVSSARRATGVPIPGYRWVEATGRRR
Ga0307313_102532681	3300028715	Soil	DVLRSNQLKFGLTDFVLRLAALARIVKRERLPEIYLQLPAWVAAARRAIGVPIPGYKWVEATGRKRLP
Ga0307311_100880351	3300028716	Soil	FRSVLEHPELELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKPA
Ga0307307_101859171	3300028718	Soil	THMREYESEEHFRSVLAHPELEFDVVRSSQLKFPLSDFVFRAAALAHVVPRSKLPELYLNLPPWVAKARRTVGVPIPGYRWVEATGRKL
Ga0307307_102073131	3300028718	Soil	QSELELDVVRSSQLKAPLTDLAFRIAAMAHVVKRERLPELYLNLPNWVSSARRATGVPIPGYRWVEAAGRRR
Ga0307317_103280591	3300028720	Soil	SVLAHPELEFDVVRSSQLKFPLSDFVFRVAALARVVPRAKLPELYLNLPPWVAKARRTVGVPIPGYRWVEATGRKL
Ga0307318_103114501	3300028744	Soil	DPTHMREYESEEHFRSVLEHPELELDVVRSSQLKFPLTDPLFRIAAAAHLIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKISSDLPR
Ga0307316_103944422	3300028755	Soil	HPELELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKPA
Ga0307288_100145223	3300028778	Soil	FRSVLEHPELELDVVRSSQLKFPLTDPLFRIAATAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKPA
Ga0307284_103715911	3300028799	Soil	LELDVVRSSQLKAPLTDLAFRIAAMAHVVKRERLPELYLNLPNWVSSARRATGVPIPGYRWVEAAGRRR
Ga0307305_100709651	3300028807	Soil	PELELDVVRSSQLKAPLTDLAFRIAAMAHVVKRERLPELYLNLPNWVSSARRATGVPIPGYRWVEAAGRRR
Ga0307296_100440102	3300028819	Soil	SEQQFRDVLTQPELELDVVRSSQLKAPLTDLAFRIAALARVIKRERLPELYLNLPTWVSSARRATGIPIPGYRWVEATGRKRE
Ga0307296_103462443	3300028819	Soil	SEQQFRDVLTQPELELDVVRSSQLKAPLTDLAFRIAAMAHVVKRERLPELYLNLPNWVSSARRATGVPIPGYRWVEATGRRS
Ga0307310_102806851	3300028824	Soil	EEQFRSVLEQPQLELDVVRSSQLKAPLTDLAFRIAAVAHLLRRERLPELYLNLPSWVSSARRATGVPIPGYRWVEATGTKRE
Ga0307310_103807721	3300028824	Soil	WQLDPTHMREYESEQQFRSVLKQPQLELDVVRSSQLKAPLTDLAFRIAAVARLIKRERLPELYLNLPMWVASARRATGVPIPGYRWVEATGRKRVA
Ga0307312_104912991	3300028828	Soil	FRSVLEQPQLELDVVRSSQLKAPLTDLAFRIAAVAHLLRRERLPELYLNLPSWVSSARRATGVPIPGYRWVEATGTKRE
Ga0307312_104998321	3300028828	Soil	MREYESEQQFRDVLTQPELELDVVRSSQLKAPLTDLAFRIAAMAHVVKRERLPELYLNLPNWVSSARRATGVPIPGYRWVEAAGRRR
Ga0307278_105285502	3300028878	Soil	MREYESEQQFRDVLTQPELELDVVRSSQLKAPLTDLAFRVAAMAHVIKRERLPELYLNLPKWVSSARRATGVPIPGYRWVEATGRKRAA
Ga0307308_101784971	3300028884	Soil	THRREYESEEHFRSVLEHPALELEVVRSSQLKFPLTDPLFRIAALAHVIKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRVS
Ga0307304_100863071	3300028885	Soil	REYESEQHFRSVLEHPELELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRAE
Ga0307304_104861132	3300028885	Soil	SEQHFRSVLEHPELELDVVRSSQLKFPLTDPLFRIAAAAHLLKREQLPEIYLRLPRRLRGARRALGVPIPGYRWVEATGRKRVS
Ga0307497_103920012	3300031226	Soil	VRSSQLKFPLSDFVFRAAALAHVVPRAKLPELYLNLPPWVAKARRAVGVPIPGYRWVEATGRKR
Ga0307468_1025168211	3300031740	Hardwood Forest Soil	REYASEEHFRSVLAHPDLRFDVVRSSQLKFPLTDPLFRIAAAAHVLKREQLPEIYLRLPRALREVRRTLAVPIPGYRWVEATGRKT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074852

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences