NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F074850

Metagenome / Metatranscriptome Family F074850

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074850
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 61 residues
Representative Sequence TVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRWRRPDARVPAAAGAQ
Number of Associated Samples 58
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.68 %
% of genes near scaffold ends (potentially truncated) 99.16 %
% of genes from short scaffolds (< 2000 bps) 87.39 %
Associated GOLD sequencing projects 51
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (61.345 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(45.378 % of family members)
Environment Ontology (ENVO) Unclassified
(44.538 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(66.387 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 38.46%    β-sheet: 0.00%    Coil/Unstructured: 61.54%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF13374TPR_10 5.04
PF13340DUF4096 4.20
PF13424TPR_12 3.36
PF00589Phage_integrase 2.52
PF00145DNA_methylase 1.68
PF01740STAS 1.68
PF13683rve_3 1.68
PF07311Dodecin 0.84
PF13676TIR_2 0.84
PF02687FtsX 0.84
PF03070TENA_THI-4 0.84
PF04909Amidohydro_2 0.84
PF07876Dabb 0.84
PF00239Resolvase 0.84
PF10503Esterase_PHB 0.84
PF14362DUF4407 0.84
PF00440TetR_N 0.84
PF08281Sigma70_r4_2 0.84
PF03795YCII 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 1.68
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.84
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.84
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.84
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 0.84


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.34 %
All OrganismsrootAll Organisms38.66 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10133661Not Available974Open in IMG/M
3300003219|JGI26341J46601_10172868Not Available595Open in IMG/M
3300003368|JGI26340J50214_10087881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales808Open in IMG/M
3300005164|Ga0066815_10072989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia606Open in IMG/M
3300005332|Ga0066388_104560322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia705Open in IMG/M
3300006575|Ga0074053_11641023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia584Open in IMG/M
3300006606|Ga0074062_12582078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia563Open in IMG/M
3300009520|Ga0116214_1448972Not Available505Open in IMG/M
3300009521|Ga0116222_1015321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii3538Open in IMG/M
3300009521|Ga0116222_1497979Not Available533Open in IMG/M
3300009521|Ga0116222_1524767Not Available519Open in IMG/M
3300009522|Ga0116218_1222004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria851Open in IMG/M
3300009522|Ga0116218_1474559Not Available558Open in IMG/M
3300009523|Ga0116221_1033805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii2505Open in IMG/M
3300009523|Ga0116221_1339194Not Available652Open in IMG/M
3300009525|Ga0116220_10015467All Organisms → cellular organisms → Bacteria3046Open in IMG/M
3300009525|Ga0116220_10033120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii2122Open in IMG/M
3300009525|Ga0116220_10059401All Organisms → cellular organisms → Bacteria → Terrabacteria group1598Open in IMG/M
3300009525|Ga0116220_10566576Not Available520Open in IMG/M
3300009672|Ga0116215_1385355Not Available607Open in IMG/M
3300009683|Ga0116224_10302492Not Available761Open in IMG/M
3300009683|Ga0116224_10386283Not Available666Open in IMG/M
3300009683|Ga0116224_10477567Not Available594Open in IMG/M
3300009698|Ga0116216_10517270Not Available721Open in IMG/M
3300009700|Ga0116217_10295225Not Available1042Open in IMG/M
3300009700|Ga0116217_10694634Not Available630Open in IMG/M
3300009700|Ga0116217_10994635Not Available513Open in IMG/M
3300009839|Ga0116223_10380363Not Available833Open in IMG/M
3300009839|Ga0116223_10432525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria771Open in IMG/M
3300010341|Ga0074045_10211230Not Available1296Open in IMG/M
3300010341|Ga0074045_10447421Not Available834Open in IMG/M
3300010343|Ga0074044_10031063All Organisms → cellular organisms → Bacteria3762Open in IMG/M
3300010343|Ga0074044_10629697Not Available700Open in IMG/M
3300010379|Ga0136449_100202809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia3769Open in IMG/M
3300010379|Ga0136449_100416958Not Available2373Open in IMG/M
3300010379|Ga0136449_100434590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2311Open in IMG/M
3300010379|Ga0136449_100556156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1971Open in IMG/M
3300010379|Ga0136449_100986315Not Available1358Open in IMG/M
3300010379|Ga0136449_101550464Not Available1010Open in IMG/M
3300010379|Ga0136449_101579864Not Available998Open in IMG/M
3300010379|Ga0136449_101650865Not Available970Open in IMG/M
3300010379|Ga0136449_101650876Not Available970Open in IMG/M
3300010379|Ga0136449_101687959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria956Open in IMG/M
3300010379|Ga0136449_102007663Not Available854Open in IMG/M
3300010379|Ga0136449_102739704Not Available698Open in IMG/M
3300010379|Ga0136449_104654256Not Available502Open in IMG/M
3300011073|Ga0138584_1002917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1494Open in IMG/M
3300017821|Ga0187812_1038983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1616Open in IMG/M
3300017821|Ga0187812_1104769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia923Open in IMG/M
3300017821|Ga0187812_1144321Not Available768Open in IMG/M
3300017822|Ga0187802_10218096Not Available735Open in IMG/M
3300017823|Ga0187818_10115774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1161Open in IMG/M
3300017823|Ga0187818_10361286Not Available642Open in IMG/M
3300017924|Ga0187820_1292877All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300017926|Ga0187807_1111027Not Available865Open in IMG/M
3300017926|Ga0187807_1302135Not Available532Open in IMG/M
3300017932|Ga0187814_10039034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium1755Open in IMG/M
3300017932|Ga0187814_10149389Not Available871Open in IMG/M
3300017932|Ga0187814_10255446Not Available665Open in IMG/M
3300017932|Ga0187814_10347589Not Available572Open in IMG/M
3300017932|Ga0187814_10395201Not Available538Open in IMG/M
3300017937|Ga0187809_10241539Not Available651Open in IMG/M
3300017942|Ga0187808_10036711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2040Open in IMG/M
3300017942|Ga0187808_10200524Not Available887Open in IMG/M
3300017942|Ga0187808_10207820Not Available871Open in IMG/M
3300017942|Ga0187808_10234151Not Available820Open in IMG/M
3300017942|Ga0187808_10286289Not Available741Open in IMG/M
3300017942|Ga0187808_10391061Not Available635Open in IMG/M
3300017943|Ga0187819_10397582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia792Open in IMG/M
3300017955|Ga0187817_10037529All Organisms → cellular organisms → Bacteria → Terrabacteria group2957Open in IMG/M
3300017955|Ga0187817_10286187Not Available1051Open in IMG/M
3300017955|Ga0187817_10382702Not Available898Open in IMG/M
3300017961|Ga0187778_10195348Not Available1288Open in IMG/M
3300017961|Ga0187778_10307874Not Available1026Open in IMG/M
3300017966|Ga0187776_10315642Not Available1021Open in IMG/M
3300017973|Ga0187780_11187735Not Available559Open in IMG/M
3300017973|Ga0187780_11412836Not Available513Open in IMG/M
3300017975|Ga0187782_11014972Not Available646Open in IMG/M
3300017975|Ga0187782_11357835Not Available558Open in IMG/M
3300018001|Ga0187815_10076426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1408Open in IMG/M
3300018001|Ga0187815_10195542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia856Open in IMG/M
3300018001|Ga0187815_10275678Not Available712Open in IMG/M
3300018007|Ga0187805_10063389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1661Open in IMG/M
3300018043|Ga0187887_10652973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia621Open in IMG/M
3300018047|Ga0187859_10665116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia590Open in IMG/M
3300018058|Ga0187766_10287004All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300018058|Ga0187766_10541548Not Available788Open in IMG/M
3300018062|Ga0187784_10344071Not Available1209Open in IMG/M
3300018062|Ga0187784_11539868Not Available526Open in IMG/M
3300018085|Ga0187772_11320901Not Available534Open in IMG/M
3300018086|Ga0187769_11243826Not Available563Open in IMG/M
3300018086|Ga0187769_11344784Not Available540Open in IMG/M
3300027568|Ga0208042_1008553All Organisms → cellular organisms → Bacteria2756Open in IMG/M
3300027662|Ga0208565_1106334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria842Open in IMG/M
3300027854|Ga0209517_10283346Not Available976Open in IMG/M
3300027854|Ga0209517_10385498Not Available792Open in IMG/M
3300027905|Ga0209415_10981697Not Available564Open in IMG/M
3300027905|Ga0209415_11066363Not Available530Open in IMG/M
3300030056|Ga0302181_10056104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2053Open in IMG/M
3300030494|Ga0310037_10157930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1025Open in IMG/M
3300030494|Ga0310037_10262687Not Available745Open in IMG/M
3300030494|Ga0310037_10342222Not Available629Open in IMG/M
3300030494|Ga0310037_10392262Not Available576Open in IMG/M
3300030618|Ga0311354_10529176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1159Open in IMG/M
3300030706|Ga0310039_10054080Not Available1771Open in IMG/M
3300030707|Ga0310038_10223205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria886Open in IMG/M
3300030707|Ga0310038_10356769Not Available645Open in IMG/M
3300030906|Ga0302314_10683064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1053Open in IMG/M
3300032160|Ga0311301_10039601All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia11469Open in IMG/M
3300032160|Ga0311301_10077207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6905Open in IMG/M
3300032160|Ga0311301_10502218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1797Open in IMG/M
3300032160|Ga0311301_12910352Not Available518Open in IMG/M
3300032770|Ga0335085_10131415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3176Open in IMG/M
3300032770|Ga0335085_10460614All Organisms → cellular organisms → Bacteria1460Open in IMG/M
3300032770|Ga0335085_10855568All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300032770|Ga0335085_12476995Not Available515Open in IMG/M
3300032782|Ga0335082_10850224Not Available775Open in IMG/M
3300032783|Ga0335079_11092487All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300032805|Ga0335078_11872270Not Available649Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil45.38%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment24.37%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland11.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.88%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.52%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.52%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.68%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300003368Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2EnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011073Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1013366113300000567Peatlands SoilPAAGRRRQRLDQRGTGANRQRALFTSTASTPAFITALARATLSGYEPGRWRRPDARIPAAAGAQ*
JGI26341J46601_1017286813300003219Bog Forest SoilGADRQRALFTSAASTPAFITALARATLSGYEPGRWHRPDARVPAAAGAQ*
JGI26340J50214_1008788113300003368Bog Forest SoilGDTETITGLLRRLDQRGTGADRQRALFTSAASTPAFITALARATLSSHEPGRWRPDARVPAAAGAR*
Ga0066815_1007298923300005164SoilDHGDTETVTGLLGRLDDRGTGADRQRALFASGVSTPAFITALARETLSGYEPGHWRRPGARVPAAAGAR*
Ga0066388_10456032213300005332Tropical Forest SoilYPALSDHGDAETVTGLLRRLDDRGTGADRQRALFTSGLSTPAFVTALARATLSGHEPGRQRAGARVPAAAGARQGI*
Ga0074053_1164102323300006575SoilPALSDHGDTETVTGLLGRLDDRGTGADRQRALFASGVSTPAFITALARETLSGYEPGHWRRPGARVPAAAGAR*
Ga0074062_1258207813300006606SoilLGRLDDRGTGADRQRALFASGVSTPAFITALARETLSGYEPGHWRRPGARVPAAAGAR*
Ga0116214_144897213300009520Peatlands SoilRLDQRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRPDAPVPAAAGAQ*
Ga0116222_101532113300009521Peatlands SoilDAETVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGHEPGRWRQPDAQVPAAAGAQ*
Ga0116222_149797913300009521Peatlands SoilEICTATAPRSARRRLLRRLDDRGTGADRQRALFTSGISTPAFITALARATLSGYEPGRWRRPGAWVPAAAGAQ*
Ga0116222_152476713300009521Peatlands SoilLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRWHRPGAQVPAAAGAQQGV*
Ga0116218_122200413300009522Peatlands SoilDQRGTGADRQRALFTSAASTPAFITALARATLSGYELGRRRRPDARVPAAAGAQ*
Ga0116218_147455913300009522Peatlands SoilRGTGADRQRALFTSAASTPAFITALARATLSGHQPGRQHRPDARIPAAAGAQ*
Ga0116221_103380513300009523Peatlands SoilGTGANRQRALFTSTASTPAFITALARATLSGHEPGRWRQPDAQVPAAAGAQ*
Ga0116221_133919413300009523Peatlands SoilRLDDRGTGADRQRALFTSAASTPAFIKALARATLSGDERGRWRRADARVPAAAGAQ*
Ga0116220_1001546763300009525Peatlands SoilDDRGTGADRQRALFTSAASTPAFITALARATLSGYQPGRWRRPGGRVPAAAAAQ*
Ga0116220_1003312013300009525Peatlands SoilDHGDAETVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGHEPGRWRQPDAQVPAAAGAQ*
Ga0116220_1005940113300009525Peatlands SoilADRQRALFTSAASTPAFITALARATLSGYEPGRWHRPGAQVPAAAGAQQGV*
Ga0116220_1056657613300009525Peatlands SoilDHGDAETVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSCHEPGRQRPDARVPAAAGAQ*
Ga0116215_138535513300009672Peatlands SoilRLLHRLDQRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRPDAPVPAAAGAQ
Ga0116224_1030249213300009683Peatlands SoilPALSDHGDTETITRLLHRLDQRGTGADRQRALFTSAASEPAFIIALARATLSGYEPGRWRRPDARIPAAAGAQ*
Ga0116224_1038628313300009683Peatlands SoilDHGDTETITRLLRRLDQRGTGAGRQRALFTSAASAPAFIKALARETLSGYEPGRWRRPDARVPAAAGAQ*
Ga0116224_1047756713300009683Peatlands SoilDHGDTETITRLLHRLDQRGTGADRQRALFTSAASTPAFIKALARATLSGYEPGRWRRPDARVPAAAGAQ*
Ga0116216_1051727013300009698Peatlands SoilQTITRLLRRLDDRGTGADRQRALFTHAASTPAFITALARATLSGHEPCRWHRPDARVPAAAGAQ*
Ga0116217_1029522533300009700Peatlands SoilTRLLRRLDQRGTGADRQRALFTSAASTPAFITALARATLSSHEPGRWSRPDAWVPAAAGTQYTQ*
Ga0116217_1069463413300009700Peatlands SoilRGTGADRQRALFTSAASTPAFITALARATLSGYQPGRWHRPDARGPAAAGAQ*
Ga0116217_1099463523300009700Peatlands SoilRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRRRPDARIPAAAGAQ*
Ga0116223_1038036323300009839Peatlands SoilETVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGHEPGRWRQPDAQVPAAAGAQ*
Ga0116223_1043252533300009839Peatlands SoilGTGADRQRALFTSAASTPAFIQALARATLSGYEPGRQQPGARVPAAAGAQ*
Ga0074045_1021123013300010341Bog Forest SoilITRLLHRLDQRGTGADRQRALFTSAASTPAFITALAHATLPGHEPGRWHRPDARVPAAAGAQ*
Ga0074045_1044742123300010341Bog Forest SoilLLRRLDQRGTGADRQRALFTSAASPPAFIQALARATLSGYEPGRWRRPDARIPAAAAAAAGAQ*
Ga0074044_1003106313300010343Bog Forest SoilRLDDRGTGADRQRALFTSAASTPAFITALARETLSGHEPGRRRRPGTRVPAAAGAQ*
Ga0074044_1062969713300010343Bog Forest SoilRGTGADRQRALFTSAASTPAFITALAHATLPGHEPGRWHRPDARVPAAAGAQ*
Ga0136449_10020280913300010379Peatlands SoilTETITRLLRRLDQRGTGADCQRALFASVASTPAFITALARATLSGYEPGRWRRPDARVPAAAGAQ*
Ga0136449_10041695813300010379Peatlands SoilGADRQRALFTSGISTPAFITALARATLSGYEPGRWRRPGAWVPAAAGAQ*
Ga0136449_10043459013300010379Peatlands SoilGTGADRQRALFTSATSTPAFITALARATLSGYQPGRWHRPDARIPAAAGAQ*
Ga0136449_10055615613300010379Peatlands SoilTGADRQRALFTSAASTPAFITALARATLSSHEPGRWSRPDAWVPAAAGTQYTQ*
Ga0136449_10098631513300010379Peatlands SoilVDPSTDARYGDGTEICTATAPRSARRRLLRRLDDRGTGADRQRALFTSGISTPAFITALARATLSGYEPGRWRRP
Ga0136449_10155046413300010379Peatlands SoilRLLHRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRWHRPGAQVPAAAGAQQGV*
Ga0136449_10157986413300010379Peatlands SoilTETITRLLHRLDQRGTGAGRQRALFTSAASTPAFITALARATLSGYEPGRWRRPDARVPAAAGAQ*
Ga0136449_10165086513300010379Peatlands SoilETITRLLHRLDQRGTGAGRQRALFTSAASTPAFIQALARATLSGYEPGRLRRPDARVPAAAGAQ*
Ga0136449_10165087623300010379Peatlands SoilLDQRGTGADRQRALFTSAASTPAFITALARATLSGHQPGRQHRPDARIPAAAGAQ*
Ga0136449_10168795913300010379Peatlands SoilETITRLLHRLDQRGTGADRQRALFTSAASTPAFITALARATLSGYELGRRRRPDARVPAAAGAQ*
Ga0136449_10200766333300010379Peatlands SoilLDQRGTGADRQRALFTSAASTPAFITALARATLSGHQPGRRRRPDARIPAAAGAQ*
Ga0136449_10273970413300010379Peatlands SoilTGADRQRALFTSAASTPAFITALARATLSSHEPGRWSRPDARIPAAAGAQ*
Ga0136449_10465425613300010379Peatlands SoilHGDTETITRLLHRLDQRGTGADRQRALHASAASTPAFITALARATLSGHQPDRQRPGARIPAAAAAQ*
Ga0138584_100291713300011073Peatlands SoilTGADRQRALFTSAASEPAFIIALARATLSGHEPGRWRQPDAQVPAAAGAQ*
Ga0187812_103898313300017821Freshwater SedimentLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGHEPGRWHRPDARVPAAAGAR
Ga0187812_110476913300017821Freshwater SedimentTETATRLLRRLDDRGTGADRQPALFTSAASTPAFITALARATLSGYEPGRRRRPDVRVPAAARAQ
Ga0187812_114432113300017821Freshwater SedimentLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRPDARVPAAARAQ
Ga0187802_1021809623300017822Freshwater SedimentITGLLRRLDDRGTGADRQRALFTSGLSTPVFITALARATLSGHQPDRQRPDARVPAAAGAQQSRIRSRHHANRQAG
Ga0187818_1011577423300017823Freshwater SedimentGAGRQHALFTRGVSTPAFITALARATLSGYEPGRWRRPDARVPAAAGAQQGI
Ga0187818_1036128613300017823Freshwater SedimentSDHGDTETVTRLLRRLDQRGTGADRQRALFTSAASTPAFITALARATLSGYETGRWRRPDARVPAAAGAQ
Ga0187820_129287713300017924Freshwater SedimentTVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRWRRPDARVPAAAGAQ
Ga0187807_111102713300017926Freshwater SedimentITGLLRRLDDRGTGADRQRALFTSAASPPAFITALARATLSGYEPGRWRRPGARVPAAAGAR
Ga0187807_130213513300017926Freshwater SedimentDTETVTRLLRRLDDRGTGADRQRALFTSAASTPAFIQALARATLSGYETRRWPRPGARIPAAAGAQ
Ga0187814_1003903413300017932Freshwater SedimentGAGRQQALFTRGVSTPAFITALARATLSGYEPGRWRRPDARVPAAAGAQQGI
Ga0187814_1014938923300017932Freshwater SedimentLLYRLGDRGTGADRQRALFTSAASTPAFITALARATLSGYETGRWRRPDARVPAAAGAQ
Ga0187814_1025544623300017932Freshwater SedimentDRGTGADRQRALFTSAASPPAFITALARATLSGYEPGRWRRPGARVPAAAGAR
Ga0187814_1034758913300017932Freshwater SedimentGADRQRALFTRGVSTPAFITALARATLSGYEPGRWHRPGARVPAAAGAQ
Ga0187814_1039520113300017932Freshwater SedimentLLRRLDDRGTGADRQRALFTSGVSAPAFITALASATVSGYEPGRWRRPEARVRAAAGAAGDLRRSSTGSSALT
Ga0187809_1024153913300017937Freshwater SedimentLLHRLDDRGTGADRQRALFTRAASTPVFITALARATLSGHEPGRQRPDARVPAAAGAQ
Ga0187808_1003671113300017942Freshwater SedimentETITGLLHRLDDRGTGADRQRALFTRAASTPAFITALARATLSGHEPGRWHRPDARVPAAAGAQ
Ga0187808_1020052423300017942Freshwater SedimentLYRLGDRGTGADRQRALFTSAASTPAFITALARATLSGYETGRWRRPDARVPAAAGAQ
Ga0187808_1020782013300017942Freshwater SedimentDAETVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRWRRPDARVPAAAGAQQGI
Ga0187808_1023415123300017942Freshwater SedimentRLGDRGTGADRQRALFTSAASTPAFITALARATLSGYETGRWHRPDARVPAAAAAH
Ga0187808_1028628913300017942Freshwater SedimentLLRQLDDRGTGADRQRALFTSAASAPAFITALARATLSGYEPGRWRRPGARVPAAAGAR
Ga0187808_1039106113300017942Freshwater SedimentRLDDRGTGADRQRALFTRGVSTPAFITALARATLSGYEPGRWHRPGARVPAAAGAQ
Ga0187819_1039758213300017943Freshwater SedimentRDHGDTQTVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRPDARVPAAARAQ
Ga0187817_1003752943300017955Freshwater SedimentVYPALGDHGDTQIITGLLRRLDDRGTGADRQRALFTSGLSTPVFITALARATLSGHQPDRQRPDARVPAAAGAQQSRIRSRHHANRQAG
Ga0187817_1028618713300017955Freshwater SedimentDTETVTRLLRRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRWRRPDARVPAAAGAQQGI
Ga0187817_1038270213300017955Freshwater SedimentDTETITGLLHRLDDRGTGADRQRALFTRAASTPVFITALARATLSGHEPGRQRPDARVPAAAGAQ
Ga0187778_1019534813300017961Tropical PeatlandSDHGDTETITGLLHRLDDRGTGADRQRALFTSGVSTPAFITALARATLGGYEQGRQRPGARVPAAAGAQ
Ga0187778_1030787413300017961Tropical PeatlandDRQRALFTGAASPPAFITALADATLSGYEPGRWHRPDAPVPAAAGAAPVASRRELK
Ga0187776_1031564213300017966Tropical PeatlandLLRRLDDRGTGADRQRALFTSTASTPAFITALARATLSGYEPGRRRLPDARPAGPGPHLGPVSGEHWR
Ga0187780_1118773513300017973Tropical PeatlandRLDDQGTGAGRQRALFTSAAAAPAFITALARATRSGHEPDRWRRPHARVPAAAGAQ
Ga0187780_1141283613300017973Tropical PeatlandLLRRLDDRGTGADRQRALFTSGLSTPAFITALGRATLSGYEPGRWRRPGARLPAAAGAQ
Ga0187782_1101497213300017975Tropical PeatlandRGTGADRQRALFTSGVSTPAFITALARATLGGYEQGRQRPGARVPAAAGAQ
Ga0187782_1135783513300017975Tropical PeatlandTRLLDRLEDRGTGADRQRALFSGAASAPAFITALAAATLSGYEPGRWRRPGA
Ga0187815_1007642613300018001Freshwater SedimentTITSLLRRLDQRGTGADRQRALFTSAASTPAFITALARATLSGHEPGRWHRPDARVPAAAGAQ
Ga0187815_1019554213300018001Freshwater SedimentRGTGADRQRALFTSAASTPAFIQALARATLSGYETRRWRWPAARVPAAAGAQ
Ga0187815_1027567813300018001Freshwater SedimentRLLHRLDQRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRPDARVPAAARAQ
Ga0187805_1006338913300018007Freshwater SedimentDTETVTRLLRRLDDRGTGADRQRALFTSAASTPAFIQALARATLSGYETRRWRWPAARVPAAAGAQ
Ga0187887_1065297323300018043PeatlandDDRGTGADRQRALFTSAASTPAFIKALARATLSGHEPRRWRPDARVPAAAGAR
Ga0187859_1066511623300018047PeatlandLDDRGTGADRQRALFTSAASTPAFIKALARATLSGHEPRRWRPDARVPAAAGAR
Ga0187766_1028700413300018058Tropical PeatlandQTVAGLLDRLDDRGTGADRQRAVFTSAASAPAFITALARATRSGYEPGRWRRPGA
Ga0187766_1054154823300018058Tropical PeatlandTGADRQRALFTGAASTPAFITALARASLSGYEPGRWRRPDARVPAAAGTALVASRQKLK
Ga0187784_1034407123300018062Tropical PeatlandDRSSGADRQRALFTRSASPAAFITALARATLTGHEPGRQRPGARVPAEAGAQ
Ga0187784_1153986823300018062Tropical PeatlandLDDQGTGAGRQRALFARAASPDAFITALARATLSGYQPGRWRPGARVPAAAGAQ
Ga0187772_1132090113300018085Tropical PeatlandTGAGRQRALFARAASPAAFVTALARATLSGYQPGRWRPGARVPAAAGAQ
Ga0187769_1124382613300018086Tropical PeatlandRGTGADRQRALFTRGLATPVFITALARATLSGHEPVRWRRPDARAPAAAAAAAGAQ
Ga0187769_1134478413300018086Tropical PeatlandHGDTETITGLLRRLGQRGTGAGRQRALFTSGLSTPAFITALARATLSGYEPRPGRPPGARVPAAAGAQQGT
Ga0208042_100855313300027568Peatlands SoilDDRGTGADRQRALFTSAASTPAFITALARATLSGYQPGRWRRPGGRVPAAAAAQ
Ga0208565_110633433300027662Peatlands SoilTETITRLLHRLDQRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRPDAPVPAAAGAQ
Ga0209517_1028334613300027854Peatlands SoilPRPAAGRRRQRLDQRGTGANRQRALFTSTASTPAFITALARATLSGYEPGRWRRPDARIPAAAGAQ
Ga0209517_1038549813300027854Peatlands SoilRGTGADRQRALFTSAASTPAFITALARATLSGDEPGRWRRPDARIPAAAGTQ
Ga0209415_1098169713300027905Peatlands SoilGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRPDAPVPAAAGAQ
Ga0209415_1106636313300027905Peatlands SoilGADRQRALFTSAASTPAFITALARATLSGYEPGRWHRPGAQVPAAAGAQQGV
Ga0302181_1005610413300030056PalsaGDTETITRLLRRLDDRGTGADRQRALFTSAASTPAFIKALARATLSGHEPRRWRPDARVPAAAGAR
Ga0310037_1015793033300030494Peatlands SoilDPATTETITRLLHRLDQRGTGADRQRALFTSAASPPAFITALARATLSGHEPGRRRRPDARIPAAAGAQ
Ga0310037_1026268723300030494Peatlands SoilSDHGDTETITRLLRRLDQRGTGAGRQRALFTSAASAPAFIKALARETLSGYEPGRWRRPDARVPAAAGAQ
Ga0310037_1034222233300030494Peatlands SoilGDTETITGLLRRLDDRGTGAGRQRALFTSAASPPAFITALARATLSGHEPGRWRRPGAWVPAAAGAR
Ga0310037_1039226213300030494Peatlands SoilQTITRLLRRLDDRGTGADRQRALFTHAASTPAFITALARATLSGHEPCRWHRPDARVPAAAGAQ
Ga0311354_1052917613300030618PalsaRLLRRLDDRGTGADRQRALFTSAASTPAFIKALARATLSGHEPRRWRPDARVPAAAGAR
Ga0310039_1005408043300030706Peatlands SoilTRLLHRLDDRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRWHRPGAQVPAAAGAQQGV
Ga0310038_1022320533300030707Peatlands SoilDTETITRLLHRLDQRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRPDAPVPAAAGAQ
Ga0310038_1035676933300030707Peatlands SoilDPGATETITTLLRRVDQRGTGADRQRALFTSAASTPAFITALARATLSGYEPGRRRRRRPDARIPAAAGAQ
Ga0302314_1068306413300030906PalsaDRGTGADRQRALFTSAASTPAFIKALARATLSGHEPRRWRPDARVPAAAGAR
Ga0311301_1003960133300032160Peatlands SoilVDPSTDARYGDGTEICTATAPRSARRRLLRRLDDRGTGADRQRALFTSGISTPAFITALARATLSGYEPGRWRRPGAWVPAAAGAQ
Ga0311301_1007720713300032160Peatlands SoilTTLLRRLDDRGTGADRQRALFTSGVSTPAFIQALARATLSGHEPGRQRPDARVPAATGEQ
Ga0311301_1050221813300032160Peatlands SoilHGDTETITRLLHRLDQRGTGADRQRALFTSAASPPAFITALARATLSGHEPGRRRRPDARIPAAAGAQ
Ga0311301_1291035213300032160Peatlands SoilALRDHGDTETITGLLRRLDDRGTGAGRQRALFTSAASPPAFITALARATLSGHEPGRWRRPGAWVPAAAGAR
Ga0335085_1013141513300032770SoilVYPALTDHGDTETITRLLRRLDDRGTGADRQRALFTSRLSTPAFITALARATLSGYEPGRQRAGSRVPAAAGAQQGI
Ga0335085_1046061423300032770SoilRLLRRLEDRGTGAGRQRALFTSGLATPAFITALARATLSGHEPVRWRRPDARAAAGAQ
Ga0335085_1085556823300032770SoilMTTLLRRLDWGTGADRQRAVFTSAASTPAFITSLALASLSGCEPGRQRAGARIAG
Ga0335085_1247699513300032770SoilEHVSPALAGHGDTETITRLLRRLEDRGTGAGRQRALFTSGLATPVFITALARATLSGHEPVRWRRPDARAAAAAAAGAQ
Ga0335082_1085022423300032782SoilHGDTETITRLLRRLDDQGTGAGRQRALFTRGLSTPAFITALARATLSGYEPGPWRRPGDRIPAAAGPQ
Ga0335079_1109248723300032783SoilTGLLRRLDDRGTGAGRQRALLTSGLSTPAVITALARATLSGHEPGRQRAGARVPATAAAR
Ga0335078_1187227023300032805SoilTGADRQRALFTRGLSAPAVITALGRATLSGYEPGRQRAGARVPAPAAKAVVPCQ


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