Metagenome / Metatranscriptome Family F074848

Basic Information
Family ID	F074848
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	50 residues
Representative Sequence	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Number of Associated Samples	108
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.56 %
% of genes near scaffold ends (potentially truncated)	34.45 %
% of genes from short scaffolds (< 2000 bps)	81.51 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (97.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.126 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 80.39% β-sheet: 0.00% Coil/Unstructured: 19.61%
Feature Viewer

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Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00815	Histidinol_dh	57.14
PF00144	Beta-lactamase	23.53
PF02511	Thy1	10.92
PF00977	His_biosynth	3.36
PF17164	DUF5122	0.84
PF00701	DHDPS	0.84
PF03793	PASTA	0.84
PF00005	ABC_tran	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	57.14
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	23.53
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	23.53
COG2367	Beta-lactamase class A	Defense mechanisms [V]	23.53
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	10.92
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.18 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.18 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.61 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	29.41 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	29.41 %
Unclassified	root	N/A	2.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig108737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101898637	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300004156\|Ga0062589_101227962	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300004463\|Ga0063356_100886307	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300005158\|Ga0066816_1005897	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005166\|Ga0066674_10003431	All Organisms → cellular organisms → Bacteria	5967	Open in IMG/M
3300005171\|Ga0066677_10055635	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300005172\|Ga0066683_10320830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	963	Open in IMG/M
3300005177\|Ga0066690_10101928	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300005179\|Ga0066684_10216860	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300005181\|Ga0066678_10102797	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300005332\|Ga0066388_100548275	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300005332\|Ga0066388_100756287	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300005332\|Ga0066388_104083108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300005332\|Ga0066388_107240169	Not Available	557	Open in IMG/M
3300005341\|Ga0070691_10918748	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005345\|Ga0070692_10620076	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005356\|Ga0070674_100063788	All Organisms → cellular organisms → Bacteria	2580	Open in IMG/M
3300005445\|Ga0070708_100382275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1327	Open in IMG/M
3300005450\|Ga0066682_10949274	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005518\|Ga0070699_101357924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300005518\|Ga0070699_102036383	Not Available	525	Open in IMG/M
3300005536\|Ga0070697_100277445	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300005558\|Ga0066698_10039792	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300005568\|Ga0066703_10829410	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005574\|Ga0066694_10542141	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005586\|Ga0066691_10290845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	963	Open in IMG/M
3300005614\|Ga0068856_101594054	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005615\|Ga0070702_100939751	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005713\|Ga0066905_100506175	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300005719\|Ga0068861_100092830	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300005764\|Ga0066903_100028940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6199	Open in IMG/M
3300005764\|Ga0066903_100117733	All Organisms → cellular organisms → Bacteria	3677	Open in IMG/M
3300006031\|Ga0066651_10555186	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300006046\|Ga0066652_100002982	All Organisms → cellular organisms → Bacteria	9462	Open in IMG/M
3300006046\|Ga0066652_100484344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1146	Open in IMG/M
3300006575\|Ga0074053_11990308	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300006579\|Ga0074054_10509322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300006580\|Ga0074049_12477400	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006603\|Ga0074064_11077763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1189	Open in IMG/M
3300006794\|Ga0066658_10096348	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300006797\|Ga0066659_10306494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1214	Open in IMG/M
3300006852\|Ga0075433_10007282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8770	Open in IMG/M
3300006854\|Ga0075425_101325555	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300006904\|Ga0075424_100034415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5255	Open in IMG/M
3300006953\|Ga0074063_12428611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300009012\|Ga0066710_101029580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1271	Open in IMG/M
3300009012\|Ga0066710_101492014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300009092\|Ga0105250_10626522	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300009137\|Ga0066709_100398330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1909	Open in IMG/M
3300009137\|Ga0066709_102677499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300009137\|Ga0066709_103077930	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300009147\|Ga0114129_12216024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300009148\|Ga0105243_10009144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7566	Open in IMG/M
3300010154\|Ga0127503_10812133	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300010325\|Ga0134064_10092099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300010375\|Ga0105239_11554525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300012198\|Ga0137364_10790925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300012199\|Ga0137383_10282517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1216	Open in IMG/M
3300012206\|Ga0137380_10234005	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300012206\|Ga0137380_10675732	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300012208\|Ga0137376_10157820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1954	Open in IMG/M
3300012209\|Ga0137379_10338152	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300012211\|Ga0137377_10013368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7007	Open in IMG/M
3300012359\|Ga0137385_10356467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1251	Open in IMG/M
3300012373\|Ga0134042_1014729	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300012400\|Ga0134048_1072310	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300012957\|Ga0164303_10060072	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300012960\|Ga0164301_10369366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300012985\|Ga0164308_10561418	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300012988\|Ga0164306_10188994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1437	Open in IMG/M
3300012989\|Ga0164305_10059771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2276	Open in IMG/M
3300013764\|Ga0120111_1092886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300014150\|Ga0134081_10359473	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300014166\|Ga0134079_10189555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300015357\|Ga0134072_10230306	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300015358\|Ga0134089_10203449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300015371\|Ga0132258_12714953	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300015374\|Ga0132255_101525533	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300017654\|Ga0134069_1124274	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300017659\|Ga0134083_10160893	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300017944\|Ga0187786_10083432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300018000\|Ga0184604_10115428	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300018027\|Ga0184605_10006668	All Organisms → cellular organisms → Bacteria	4249	Open in IMG/M
3300018060\|Ga0187765_11172622	Not Available	537	Open in IMG/M
3300018066\|Ga0184617_1169662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300018431\|Ga0066655_10010467	All Organisms → cellular organisms → Bacteria	3996	Open in IMG/M
3300018468\|Ga0066662_10071400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2327	Open in IMG/M
3300018482\|Ga0066669_10476962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1076	Open in IMG/M
3300018482\|Ga0066669_11292614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300019255\|Ga0184643_1040888	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300019356\|Ga0173481_10136562	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300019875\|Ga0193701_1056855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300019885\|Ga0193747_1009863	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300021080\|Ga0210382_10347862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300021418\|Ga0193695_1002160	All Organisms → cellular organisms → Bacteria	3470	Open in IMG/M
3300022195\|Ga0222625_1644692	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300025910\|Ga0207684_10334397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1305	Open in IMG/M
3300025923\|Ga0207681_10765019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300025934\|Ga0207686_10254206	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300025935\|Ga0207709_10061745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2343	Open in IMG/M
3300025937\|Ga0207669_10839035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300026095\|Ga0207676_11967794	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300026315\|Ga0209686_1217606	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300026327\|Ga0209266_1047838	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300028768\|Ga0307280_10262442	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300028784\|Ga0307282_10314487	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300028819\|Ga0307296_10264456	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300028878\|Ga0307278_10190207	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300028884\|Ga0307308_10283101	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300028885\|Ga0307304_10014614	All Organisms → cellular organisms → Bacteria	2552	Open in IMG/M
3300030829\|Ga0308203_1043266	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031114\|Ga0308187_10296059	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300031152\|Ga0307501_10017639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1310	Open in IMG/M
3300031820\|Ga0307473_10343434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300031873\|Ga0315297_10029435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4017	Open in IMG/M
3300032205\|Ga0307472_100202377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1511	Open in IMG/M
3300032770\|Ga0335085_10315470	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300033432\|Ga0326729_1022514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1029	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.87%
Host-Associated	Host-Associated	15.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.15%
Plants	Host-Associated → Plants	15.13%
Aquatic	Environmental → Aquatic	6.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.04%
Freshwater	Environmental → Aquatic → Freshwater	4.20%
Sediment	Environmental → Aquatic → Sediment	2.52%
Peat	Environmental → Terrestrial → Peat	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.50%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Lake	Environmental → Aquatic → Freshwater → Lake	0.84%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.68%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.84%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_03129770	2124908032	Soil	MTRDATFLLALVSLAAAALAVGVSGWVLFSRDHRMAKQTHDAAAAHPEVPEGT
INPhiseqgaiiFebDRAFT_1018986372	3300000364	Soil	MDRDATFLFALILFAAAALAVGASGWVLWIRDHRLAKATDVAPDAPHHEVTEEE*
Ga0062589_1012279622	3300004156	Soil	MDRDATFLLALVLFAVAGLAVGASGWVLWARDHRLAKAASAAAHREVAEER*
Ga0063356_1008863072	3300004463	Arabidopsis Thaliana Rhizosphere	MDRDATFLLALVLFAVAALAVGASGWVLWARDHRLAKAASAAAHREVAEER*
Ga0066816_10058972	3300005158	Soil	MDRDATFLLALVLFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER*
Ga0066674_100034314	3300005166	Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAQPEVVEER*
Ga0066677_100556352	3300005171	Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVVEER*
Ga0066683_103208302	3300005172	Soil	MDRDATFLLALILFTAAALAVGASGWVLWARDHRLAKAASAAAHHEVAEER*
Ga0066690_101019282	3300005177	Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAAIAAAHPEVVEER*
Ga0066684_102168601	3300005179	Soil	GVALVRYPGAFMDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVVEER*
Ga0066678_101027972	3300005181	Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAPLAEVVEER*
Ga0066388_1005482752	3300005332	Tropical Forest Soil	MGRDATFLFALILFAAAALAVGASGWVLWVRDHRLARSANTAAPARHEVPEEE*
Ga0066388_1007562871	3300005332	Tropical Forest Soil	MDRDATFFLALVLFAAAAIVVGASGWVLWVRDHRLAKTASAAAAASHHEVSEEH*
Ga0066388_1040831082	3300005332	Tropical Forest Soil	MDRDATFLFALILFAAAAIAVGTSGWMLWLRDHRLAKAGAVVSHHEVTEEE*
Ga0066388_1072401691	3300005332	Tropical Forest Soil	MDRNATVTLALVMFAAAALAVGASGWVLWIRDHRLAKAATAAPVATHLEVAEEE*
Ga0070691_109187481	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	LMDRDATFLLALVLFAVAALAVGASGWVLWARDHRLAKAANAAAHREVAEER*
Ga0070692_106200761	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	DRDATFLLALVLFAVAALAVGASGWVLWARDHRLAKAASAAAHREVAEER*
Ga0070674_1000637882	3300005356	Miscanthus Rhizosphere	MDRDATFLLALILFAAAGLAVGASGWVLWARDHRLAKAASAAAHPEVAEER*
Ga0070708_1003822752	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDRDATVTLALIMFAAAALAVGASGWVLWIRDHRLAKAVGAGPVAAHHEVTEEE*
Ga0066682_109492742	3300005450	Soil	FAAAALAVGASGWVLWIRDHRLAKAASAAPIAARHEVAEEE*
Ga0070699_1013579241	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEV
Ga0070699_1020363831	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LMDRDATFLLALILFAVAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER*
Ga0070697_1002774452	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDRDATFLLALILFAVAALAVGASGWVLWARDRRLAKAASAAPRREVAEER*
Ga0066698_100397923	3300005558	Soil	MDRNATFTLALIMFAAAALAVGASGWVLWIRDHRLAKAASAAPIAARHEVAEEE*
Ga0066703_108294101	3300005568	Soil	DRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVVEER*
Ga0066694_105421411	3300005574	Soil	LFAAAALAVGASGWVLWARDHRLAKAASAAAQPEVVEER*
Ga0066691_102908452	3300005586	Soil	MDRDATFLLALILFAGAALAVGASGWVLWARDHRLAKAASAAAHPEVSEDR*
Ga0068856_1015940541	3300005614	Corn Rhizosphere	CVRSVPWRLMDRDATFLLALVLFAAAALAVGTSGWVLWARDHRLAKAASAPAHPEVAEER
Ga0070702_1009397511	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDRDATFLLALVLFAAAALAVGTSGWVLWARDHRLAKAASAPAHPEVAEER*
Ga0066905_1005061752	3300005713	Tropical Forest Soil	ALAVGASGWVLWVRDHRLAKAANTAAPAAHEVPEEE*
Ga0068861_1000928301	3300005719	Switchgrass Rhizosphere	LLALVLFAAAALAVGTSGWVLWARDHRLAKAASAPAHPEVAEER*
Ga0066903_1000289409	3300005764	Tropical Forest Soil	MDRNATVTLALVMFAAAALAVGASGWVLWIRDHRLAKAATAAPVTAHHEVTEEE*
Ga0066903_1001177332	3300005764	Tropical Forest Soil	MDRDATFLFALILFAAAALAVGASGWLLWTRDHRLAKAASAAAAPREHEVAEEE*
Ga0066651_105551861	3300006031	Soil	VGSVPWRLMDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAGSAAAHPEVAEER*
Ga0066652_1000029822	3300006046	Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAGSAAAHPEVAEER*
Ga0066652_1004843442	3300006046	Soil	MDRNATVTLALVMFATAALAVGASGWVLWIRDHRLAKAASAAPVAAHHEVAEEE*
Ga0074053_119903082	3300006575	Soil	MTRDATFLLALILFASAALAVGVSGWVLWTRDHRLAKASSAAGPAAHPEVVEER*
Ga0074054_105093222	3300006579	Soil	MDRDATFLLALVLFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVAE
Ga0074049_124774001	3300006580	Soil	AALTVGVSGWVLWTRDHRLAKASSAAGPAAHPEVVEER*
Ga0074064_110777632	3300006603	Soil	MTRDATFLLTLILFAAAALAVGASGWVLWTRDHRLAKAASAATGAAHTEVVEER*
Ga0066658_100963482	3300006794	Soil	VRYPDAFMDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVVEER*
Ga0066659_103064942	3300006797	Soil	MDRDATFLLALILFAAAALAVGACGWVLWARDHRLVKAASAAAHPEVVEER*
Ga0075433_100072827	3300006852	Populus Rhizosphere	MDRDATFLLALILFAAAALAVGASGWVLWIRDHRLAKAAAVAPDAAHHEVTEEE*
Ga0075425_1013255551	3300006854	Populus Rhizosphere	LALVLFAVAALAVGASGWVLWARDHRLAKAANAAAHREVAEER*
Ga0075424_1000344152	3300006904	Populus Rhizosphere	MDRDATFLFALMLFAAAALAVGASGWVLWIRDHRLAKATDVAPDAPHHEVTEEE*
Ga0074063_124286112	3300006953	Soil	MTRDATFLLTLILFAAAALAVGASGWVLWTRDHRLAKAASAATGAA
Ga0066710_1010295802	3300009012	Grasslands Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHREVAEER
Ga0066710_1014920142	3300009012	Grasslands Soil	MDRDATFLLALILFTAAALAVGASGWVLWARDHRLAKAASAAAHHEVAEER
Ga0105250_106265222	3300009092	Switchgrass Rhizosphere	ALAVGASGWVLWARDHRLAKAASAAAHREVAEER*
Ga0066709_1003983302	3300009137	Grasslands Soil	MDRDATFLLALIVFAAAALAVGASGWVLWARDHRLAKAASAAAHREVAEER*
Ga0066709_1026774992	3300009137	Grasslands Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAPHPEVVEER*
Ga0066709_1030779302	3300009137	Grasslands Soil	RDSTFLFVLILFAAAALAVGASGWVLWIRDHRLAKAANVATVAAHHEVTEEE*
Ga0114129_122160242	3300009147	Populus Rhizosphere	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHREVAEER*
Ga0105243_100091442	3300009148	Miscanthus Rhizosphere	MDRDATFLLALVLFAAAALAVGTSGWVLWARDHRLAKAASAAAHPEVAEER*
Ga0127503_108121332	3300010154	Soil	RDATFLLALILFASAALAVGVSGWVLWTRDHRLAKASSAAGSAAHPEVVEER*
Ga0134064_100920992	3300010325	Grasslands Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAMAASAAAQPEVVEER*
Ga0105239_115545252	3300010375	Corn Rhizosphere	MDRDATFLLALVLFAVAGLAVGASGWVLWARDHRLAKAASAAAHPEVAEER*
Ga0137364_107909252	3300012198	Vadose Zone Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAARHPEVVEER*
Ga0137383_102825173	3300012199	Vadose Zone Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHHEVAEER*
Ga0137380_102340052	3300012206	Vadose Zone Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVVEDR*
Ga0137380_106757322	3300012206	Vadose Zone Soil	MDRDATFLLALFLFAAAALAVGASGWVLWARDHRLAKAASAARHPEVVEER*
Ga0137376_101578202	3300012208	Vadose Zone Soil	MDRDATFLLALVLFAAAGLAVGASGWVLWARDHRLAKAASAAAHHEVAEER*
Ga0137379_103381522	3300012209	Vadose Zone Soil	ILFAAAALAVGASGWVLWARDHRLAKAASAAPHPEVVEER*
Ga0137377_100133683	3300012211	Vadose Zone Soil	MDRDATFLLALILFAGAALAVGASGWVLWVRDHRLAKAASAAAHPEVVEER*
Ga0137385_103564672	3300012359	Vadose Zone Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVIEER*
Ga0134042_10147292	3300012373	Grasslands Soil	FLLALILFAAAALAVGASGWVLWARDHRLAKAASDAAQPEVVEER*
Ga0134048_10723102	3300012400	Grasslands Soil	RDATVTLALIMFAAAALAVGASGWVLWIRDHRLAKAASAAAVAPHPGITEEE*
Ga0164303_100600722	3300012957	Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER*
Ga0164301_103693662	3300012960	Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDRRLAKAASAAAHREVAEER*
Ga0164308_105614182	3300012985	Soil	MDRDATFLLALVLFAVAALAVGASGWVLWARDHRLAKAASAAAHHEVVEER*
Ga0164306_101889942	3300012988	Soil	MDRDATFLLALVLFAVAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER*
Ga0164305_100597712	3300012989	Soil	MDRDATFLLALILFAVAALAVGASGWVLWARDHRLAKAASAAAHREVAEER*
Ga0120111_10928862	3300013764	Permafrost	MDRDATFLLALILFAAAALAVGASGWVLWARDPRLARAASAAAHPEVVEER*
Ga0134081_103594732	3300014150	Grasslands Soil	GAFMDRDATFLLALILFTAAALAVGASGWVLWARDHRLAKAASAAAHHEVAEER*
Ga0134079_101895552	3300014166	Grasslands Soil	MDRDATFLLALILFTAAALAVGASGWVLWARDHRLAKAASAAAHPEVVEER*
Ga0134072_102303061	3300015357	Grasslands Soil	DATFLLALILFAAAALAVGASGWVLWARDHRLAKAGSAAAHPEVAEER*
Ga0134089_102034492	3300015358	Grasslands Soil	MDRDATFLLALILFAAAALAVGASGWVLWTRDHRLAKAASAAIVGAHHGVTEEA*
Ga0132258_127149532	3300015371	Arabidopsis Rhizosphere	MDRDATFLLALVLFAVAALAVGASGWVLWARDHRLAKAANAAAHREVAEER*
Ga0132255_1015255332	3300015374	Arabidopsis Rhizosphere	MDRAATFLLALVLFAVAALAVGASGWVLWARDHRLAKAANAAAHREVAEER*
Ga0134069_11242741	3300017654	Grasslands Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAMAASAAAQPEVVEER
Ga0134083_101608931	3300017659	Grasslands Soil	ALAVGASGWVLWIRDHRLAKAATAAPIAARHEVAEEE
Ga0187786_100834322	3300017944	Tropical Peatland	MTRDATFLLALILFAAAALAVGVSGWVLWTRDHRLAKATGAPEPAGHPEVVEEH
Ga0184604_101154282	3300018000	Groundwater Sediment	LVLFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0184605_100066683	3300018027	Groundwater Sediment	MDRDATFLLALVLFAIAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0187765_111726221	3300018060	Tropical Peatland	MTRDATFLLALILFAGAALAVGVSGWVLWTRDHRLAKASGAPEPAGHPEVVEEH
Ga0184617_11696622	3300018066	Groundwater Sediment	MDRDATFLLALVLFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0066655_100104675	3300018431	Grasslands Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAQPEVVEER
Ga0066662_100714002	3300018468	Grasslands Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAPLAEVVEER
Ga0066669_104769621	3300018482	Grasslands Soil	MDRNATVTLALVMFATAALAVGASGWVLWIRDHRLAKAASAAPVAAHHEVAEEE
Ga0066669_112926142	3300018482	Grasslands Soil	MDRNATFTLALIMFAAAALAVGASGWVLWIRDHRLAKAASAAPIAARHEVAEEE
Ga0184643_10408882	3300019255	Groundwater Sediment	FAAAALAVGASGWVLWARDHRLAKAASAAAHHEVAEER
Ga0173481_101365622	3300019356	Soil	MDRDATFLLALVLFAVAGLAVGASGWVLWARDHRLAKAASAAAHREVVEER
Ga0193701_10568552	3300019875	Soil	MDRDATFLLALVLFAIAALAVGASGWVLWARDHRLAKAASAAAHREVAEER
Ga0193747_10098632	3300019885	Soil	MDRDATFLLALVLFAVAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0210382_103478622	3300021080	Groundwater Sediment	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAH
Ga0193695_10021602	3300021418	Soil	MDRDATFLLALVLFAAAALAVGASGWVLWARDHRLAKAASAAAHHEVAEER
Ga0222625_16446922	3300022195	Groundwater Sediment	AAAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0207684_103343972	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDRDATVTLALIMFAAAALAVGASGWVLWIRDHRLAKAVGAGPVAAHHEVTEEE
Ga0207681_107650191	3300025923	Switchgrass Rhizosphere	MDRDATFLLALVLFAVAALAVGASGWVLWARDHRLAKAASAAAHREVAEER
Ga0207686_102542062	3300025934	Miscanthus Rhizosphere	MDRDATFLLALVLFAAAALAVGTSGWVLWARDHRLAKAASAPAHPEVAEER
Ga0207709_100617453	3300025935	Miscanthus Rhizosphere	MDRDATFLLALVLFAAAALAVGTSGWVLWARDHRLAKAASAAAHPEVAEER
Ga0207669_108390352	3300025937	Miscanthus Rhizosphere	MDRDATFLLALILFAAAGLAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0207676_119677942	3300026095	Switchgrass Rhizosphere	FLLALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVVEER
Ga0209686_12176061	3300026315	Soil	ALILFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVVEER
Ga0209266_10478384	3300026327	Soil	MDRDATFLLALILFAAAALAVGASGWVLWARDHRLAKAASAAPHPEVVEER
Ga0307280_102624422	3300028768	Soil	AAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0307282_103144871	3300028784	Soil	AAAALAVGASGWVLWARDHRLAKAASAAAHREVAEER
Ga0307296_102644562	3300028819	Soil	TFLLALTLFAAAALAVGASGWVLWARDHRLAKTARAAAHPEVAEDR
Ga0307278_101902071	3300028878	Soil	LILFAAAALAVGASGWVLWIRDHRLVKAASAAPVPAHHEVTEEE
Ga0307308_102831012	3300028884	Soil	MDRDATFLLALTLFAAAALAVGASGWVLWARDHRLAKTARAAAHPEVAEDR
Ga0307304_100146141	3300028885	Soil	PWRLMDRDATFLLALVLFAAAALAVGASGWVLWARDHRLAKAASAAAHREVAEER
Ga0308203_10432661	3300030829	Soil	ATFLLALVLFAIAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0308187_102960591	3300031114	Soil	FLLALVLFAAAALAVGASGWVLWARDHRLAKAASAAAHPEVAEER
Ga0307501_100176392	3300031152	Soil	MDRDATFLLALVLFAAAGLAVGASGWVLWARDHRLAKAASAAAHHEVAEER
Ga0307473_103434342	3300031820	Hardwood Forest Soil	MTRDATFLLALILFASAALAVGVSGWVLWTRDHRLAKASNAAGPAAHPEVVEER
Ga0315297_100294354	3300031873	Sediment	MTRDATFLFALVSLAAAALAVGVSGWVLFSRDHRMATLTHDAAVAHPEVPEGS
Ga0307472_1002023772	3300032205	Hardwood Forest Soil	MTRDATFLLALILFACAALAVGASGWIHWARDHRLAKAAGPAPAAHPEVVEER
Ga0335085_103154702	3300032770	Soil	MTRDATFLLALILFAFAALAVGVSGWVLWTRDHRLAKAASAAGPAAHPEVVEER
Ga0326729_10225142	3300033432	Peat Soil	MTRDATFLLALILFAAAALAVGTSGWVLWTRDHRLAKAASAAARAAHTEVVEER

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F074848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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