NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074796

Metagenome / Metatranscriptome Family F074796

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074796
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 96 residues
Representative Sequence MSIENLPEEPEDIVDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFLDEQV
Number of Associated Samples 81
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 15.97 %
% of genes near scaffold ends (potentially truncated) 21.85 %
% of genes from short scaffolds (< 2000 bps) 57.98 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (36.134 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater
(15.126 % of family members)
Environment Ontology (ENVO) Unclassified
(24.370 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(38.655 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.40%    β-sheet: 24.00%    Coil/Unstructured: 53.60%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00565SNase 5.04
PF04820Trp_halogenase 4.20
PF00210Ferritin 3.36
PF00959Phage_lysozyme 2.52
PF07432Hc1 2.52
PF07460NUMOD3 1.68
PF03330DPBB_1 1.68
PF08443RimK 0.84
PF01370Epimerase 0.84
PF16790Phage_clamp_A 0.84
PF01531Glyco_transf_11 0.84
PF12849PBP_like_2 0.84
PF00154RecA 0.84
PF00268Ribonuc_red_sm 0.84
PF14105DUF4278 0.84
PF13391HNH_2 0.84
PF13529Peptidase_C39_2 0.84
PF03446NAD_binding_2 0.84
PF05050Methyltransf_21 0.84
PF00395SLH 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0208Ribonucleotide reductase beta subunit, ferritin-like domainNucleotide transport and metabolism [F] 0.84
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.87 %
UnclassifiedrootN/A36.13 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001605|Draft_10146946All Organisms → Viruses → Predicted Viral1533Open in IMG/M
3300001855|JGI2160J19893_10032492All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011122Open in IMG/M
3300002408|B570J29032_108891209Not Available533Open in IMG/M
3300002408|B570J29032_109709692All Organisms → Viruses → Predicted Viral1104Open in IMG/M
3300003430|JGI25921J50272_10001111All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes8964Open in IMG/M
3300004112|Ga0065166_10025487All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011790Open in IMG/M
3300005527|Ga0068876_10056611All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM012382Open in IMG/M
3300005662|Ga0078894_10046861All Organisms → Viruses → Predicted Viral3647Open in IMG/M
3300005662|Ga0078894_10125079All Organisms → Viruses → Predicted Viral2292Open in IMG/M
3300005662|Ga0078894_10190623Not Available1854Open in IMG/M
3300005805|Ga0079957_1007384Not Available8641Open in IMG/M
3300005805|Ga0079957_1037283All Organisms → Viruses → Predicted Viral3131Open in IMG/M
3300005805|Ga0079957_1091935All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1680Open in IMG/M
3300005805|Ga0079957_1237978All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes853Open in IMG/M
3300005805|Ga0079957_1255341Not Available811Open in IMG/M
3300006030|Ga0075470_10024730All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM21860Open in IMG/M
3300006641|Ga0075471_10007678All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6767Open in IMG/M
3300006802|Ga0070749_10083826All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011901Open in IMG/M
3300006802|Ga0070749_10297245All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01906Open in IMG/M
3300006802|Ga0070749_10599159Not Available594Open in IMG/M
3300007169|Ga0102976_1015620All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011903Open in IMG/M
3300007214|Ga0103959_1187784All Organisms → Viruses → Predicted Viral2425Open in IMG/M
3300007538|Ga0099851_1001809All Organisms → Viruses9016Open in IMG/M
3300007541|Ga0099848_1066119Not Available1430Open in IMG/M
3300007541|Ga0099848_1168924All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes800Open in IMG/M
3300007542|Ga0099846_1339222Not Available510Open in IMG/M
3300007554|Ga0102820_1052886All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes983Open in IMG/M
3300007562|Ga0102915_1204993Not Available640Open in IMG/M
3300007634|Ga0102901_1147279Not Available668Open in IMG/M
3300008107|Ga0114340_1000024All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae162703Open in IMG/M
3300008107|Ga0114340_1003830All Organisms → Viruses10235Open in IMG/M
3300008107|Ga0114340_1048514All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM012717Open in IMG/M
3300008107|Ga0114340_1122361All Organisms → Viruses → Predicted Viral1005Open in IMG/M
3300008108|Ga0114341_10030345All Organisms → Viruses → Predicted Viral3700Open in IMG/M
3300008108|Ga0114341_10099529All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM013328Open in IMG/M
3300008113|Ga0114346_1006983All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6754Open in IMG/M
3300008113|Ga0114346_1014399All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4392Open in IMG/M
3300008117|Ga0114351_1006932Not Available9924Open in IMG/M
3300008117|Ga0114351_1103003All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4958Open in IMG/M
3300008120|Ga0114355_1011254All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM015034Open in IMG/M
3300008120|Ga0114355_1052681All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM21839Open in IMG/M
3300008120|Ga0114355_1187523Not Available685Open in IMG/M
3300009024|Ga0102811_1107231All Organisms → Viruses → Predicted Viral1045Open in IMG/M
3300009085|Ga0105103_10020620All Organisms → Viruses → Predicted Viral3233Open in IMG/M
3300009085|Ga0105103_10485319Not Available692Open in IMG/M
3300009149|Ga0114918_10424317Not Available721Open in IMG/M
3300009168|Ga0105104_10324399Not Available849Open in IMG/M
3300009170|Ga0105096_10647691Not Available557Open in IMG/M
3300009450|Ga0127391_1004787Not Available3002Open in IMG/M
3300009469|Ga0127401_1015681All Organisms → Viruses → Predicted Viral2221Open in IMG/M
3300009563|Ga0130030_1007576All Organisms → Viruses → Predicted Viral1694Open in IMG/M
3300010354|Ga0129333_10333599All Organisms → Viruses → Predicted Viral1352Open in IMG/M
3300010354|Ga0129333_10398279All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011219Open in IMG/M
3300010354|Ga0129333_11706862Not Available512Open in IMG/M
3300010389|Ga0136549_10010651All Organisms → Viruses6166Open in IMG/M
3300011268|Ga0151620_1013740All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM012865Open in IMG/M
3300011268|Ga0151620_1168019Not Available670Open in IMG/M
3300012665|Ga0157210_1068019Not Available537Open in IMG/M
3300013004|Ga0164293_10039553All Organisms → Viruses → Predicted Viral3867Open in IMG/M
3300017766|Ga0181343_1025180All Organisms → Viruses → Predicted Viral1820Open in IMG/M
3300017766|Ga0181343_1041706All Organisms → Viruses → Predicted Viral1366Open in IMG/M
3300017766|Ga0181343_1052420Not Available1198Open in IMG/M
3300017963|Ga0180437_10001278Not Available43373Open in IMG/M
3300018421|Ga0181592_10539932Not Available800Open in IMG/M
3300018682|Ga0188851_1011448Not Available1157Open in IMG/M
3300020141|Ga0211732_1001367All Organisms → Viruses → Predicted Viral1274Open in IMG/M
3300020161|Ga0211726_10358815All Organisms → Viruses → Predicted Viral2260Open in IMG/M
3300020499|Ga0208084_1003914All Organisms → Viruses → Predicted Viral2172Open in IMG/M
3300020558|Ga0208362_1057353Not Available606Open in IMG/M
3300021961|Ga0222714_10083540All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2073Open in IMG/M
3300021962|Ga0222713_10122886All Organisms → Viruses → Predicted Viral1828Open in IMG/M
3300021963|Ga0222712_10006109All Organisms → Viruses11960Open in IMG/M
3300022176|Ga0212031_1009473Not Available1351Open in IMG/M
3300022218|Ga0224502_10353676Not Available568Open in IMG/M
3300022407|Ga0181351_1004286Not Available5301Open in IMG/M
3300022407|Ga0181351_1053313All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011682Open in IMG/M
3300024346|Ga0244775_10000126All Organisms → Viruses96747Open in IMG/M
3300024346|Ga0244775_10375136Not Available1172Open in IMG/M
3300024351|Ga0255141_1014727All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1213Open in IMG/M
3300024352|Ga0255142_1046705Not Available669Open in IMG/M
3300025585|Ga0208546_1053056Not Available960Open in IMG/M
3300025732|Ga0208784_1000426All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes20803Open in IMG/M
3300025889|Ga0208644_1232314Not Available776Open in IMG/M
3300027769|Ga0209770_10371732Not Available533Open in IMG/M
3300027917|Ga0209536_100583286All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM21393Open in IMG/M
3300027917|Ga0209536_103001120Not Available543Open in IMG/M
3300027972|Ga0209079_10003232Not Available5798Open in IMG/M
(restricted) 3300028569|Ga0247843_1129169All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011078Open in IMG/M
(restricted) 3300029286|Ga0247841_10100260All Organisms → Viruses → Predicted Viral2393Open in IMG/M
3300031539|Ga0307380_10322159Not Available1424Open in IMG/M
3300031566|Ga0307378_11413868Not Available535Open in IMG/M
3300031673|Ga0307377_10216391All Organisms → Viruses → Predicted Viral1483Open in IMG/M
3300031673|Ga0307377_10271328Not Available1294Open in IMG/M
3300031758|Ga0315907_10053922All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3527Open in IMG/M
3300031758|Ga0315907_10596268Not Available858Open in IMG/M
3300031758|Ga0315907_11089376All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01569Open in IMG/M
3300031784|Ga0315899_10036837All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5149Open in IMG/M
3300031787|Ga0315900_10086764All Organisms → Viruses3102Open in IMG/M
3300031787|Ga0315900_10176401All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1932Open in IMG/M
3300031857|Ga0315909_10001956All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales27036Open in IMG/M
3300031857|Ga0315909_10112655All Organisms → Viruses → Predicted Viral2318Open in IMG/M
3300031857|Ga0315909_10133095All Organisms → Viruses → Predicted Viral2079Open in IMG/M
3300031951|Ga0315904_10205559All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1929Open in IMG/M
3300031951|Ga0315904_11227698All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01573Open in IMG/M
3300031963|Ga0315901_10001663All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales31895Open in IMG/M
3300031963|Ga0315901_10087005All Organisms → Viruses → Predicted Viral2925Open in IMG/M
3300031963|Ga0315901_10192642All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Nodensvirus → Synechococcus virus SPM21773Open in IMG/M
3300031963|Ga0315901_10394159Not Available1112Open in IMG/M
3300031999|Ga0315274_10804280Not Available996Open in IMG/M
3300032050|Ga0315906_10020845Not Available7279Open in IMG/M
3300032050|Ga0315906_10166937All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2108Open in IMG/M
3300032053|Ga0315284_10176444All Organisms → Viruses → Predicted Viral2786Open in IMG/M
3300032116|Ga0315903_10001898All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales31536Open in IMG/M
3300032163|Ga0315281_10219508All Organisms → Viruses → Predicted Viral2111Open in IMG/M
3300033233|Ga0334722_10800960Not Available667Open in IMG/M
3300033488|Ga0316621_11089026All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes599Open in IMG/M
3300033521|Ga0316616_103299981Not Available608Open in IMG/M
3300033557|Ga0316617_100055815All Organisms → Viruses → Predicted Viral2489Open in IMG/M
3300033994|Ga0334996_0009644All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6439Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater15.13%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake10.92%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton10.92%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.92%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment4.20%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake4.20%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.36%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment3.36%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine3.36%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil3.36%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater2.52%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment2.52%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.52%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.52%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.52%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.68%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.68%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater1.68%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.68%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.68%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond1.68%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.84%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.84%
Meromictic PondEnvironmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond0.84%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.84%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.84%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.84%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment0.84%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.84%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.84%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001605Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling BasinEngineeredOpen in IMG/M
3300001855Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12EnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300003430Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SDEnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300007169Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007214Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projectsEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007562Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02EnvironmentalOpen in IMG/M
3300007634Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009450Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009469Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 6m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009563Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 5, Depth 6m; RNA IDBA-UDEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300012665Freshwater microbial communities from Talbot River, Ontario, Canada - S11EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018682Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1EnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020499Freshwater microbial communities from Lake Mendota, WI - 14SEP2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020558Freshwater microbial communities from Lake Mendota, WI - 13OCT2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022218Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13EnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024351Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0hEnvironmentalOpen in IMG/M
3300024352Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_0hEnvironmentalOpen in IMG/M
3300025585Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027769Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Draft_1014694623300001605Hydrocarbon Resource EnvironmentsMSIENLPEEPEEIIDIAAKAGYLKVENELGEIKLNSHNSVEIQPKGTPFGAKVKVNNDGSLTPTLTFDTKKLREPKKNIDTKQLVDDAIDDFWEGT*
JGI2160J19893_1003249233300001855Marine SedimentPFFMSTENLPQEPKDTNDAIDIIAISGYLKVDTDIGEIKLNSHNTIEIQPKGTPFGAQVTVEDDGSITPTLTFDTKKMREPKKNINPEEILDDALEEFFNGHE*
B570J29032_10889120913300002408FreshwaterFMPENLPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRETKKNIDTKQLLDDAINDFWEGQE*
B570J29032_10970969213300002408FreshwaterFMPENLPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNAVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRESKKNIDTKQLLDDAIDDFWEGQE*
JGI25921J50272_10001111133300003430Freshwater LakeMSIQNLPDDEKDFVNIAARAGHLKVDTEIGEIKLNSYNEIEVQPEGTIFGARVKVEENGSITPTLTFDTKKLRDPKKHIDPESIIDSALEDFLENNDV*
Ga0065166_1002548733300004112Freshwater LakeMPIENAPQEPEEIIDIAAKAGYLKAKTDLGEIKLNSHNSVEIQPKGTPFGAKIKVNNDGSVTPTLTFDTKKLREPKKNIDTSKMLDDAINDFWEEQE*
Ga0068876_1005661133300005527Freshwater LakeMSIENLPEEPEDIVDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFLDEQV*
Ga0078894_1004686123300005662Freshwater LakeMPENFPQEPEKIVDIASKAGYFKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRESKKNIDTKQLLDDAIDDFWKGQE*
Ga0078894_1012507963300005662Freshwater LakeMPENFPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNAVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRESKKNIDTKQLLDDAIDDFWEGQE*
Ga0078894_1019062373300005662Freshwater LakePQEPEEIIDIAAKAGYLKAKTDLGEIKLNSHNSVEIQPKGTPFGAKIKVNNDGSVTPTLTFDTKKLREPKKNIDTSKMLDDAINDFWEEQE*
Ga0079957_1007384113300005805LakeMSIENLPEDPEDIIDIAAKAGYLKVETDIGEIKLNSHNQIEIQPKGTIFGAKIKVDQNGNTTPTLTFDTKKLRDPKKQINPKEILDTALDDFFNSQ*
Ga0079957_1037283133300005805LakeMPIENLPEEPEDIVDIAAKVGYLKVKTDIGDIKLNSHNQIEVQPKGTPFGAKIKVEQDGNITPTLTFDTKKMREPRKQINAKQMLDDALEDFLDEQV*
Ga0079957_109193543300005805LakeMSIQNLPDDEKDFVNIAARAGHLKVDTEIGEIKLNSYNEIEVQPEGTIFGAKIKVEEDGSITPTLTFDTKKLRDPKKHIDPESIIDSALEDFFGE*
Ga0079957_123797823300005805LakeMSIENLPQKSEDGIDIIANAGYLGVDTEFGEIKLNSHDSVEIQPKGTPFGAKVKVEDGGSITPTLTFDTKKMREPKKNINPEEILDDALEEFFNEYE*
Ga0079957_125534113300005805LakeMSSNNLPEDPEDIINIAAKSGYLKAKTDIGEIKLNSYNQVEIQPKGTPFGAKVKVEESGNITPTLTFDTKKLRDPKRNIDAKQMLDDAINDFWKQS*
Ga0075470_1002473043300006030AqueousMSIENLPDDEKDIINLASKAGYLKVSTDIGEIKLNSYNQVEIQPKGTPFGAKIKVEENGNITPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQDQV*
Ga0075471_1000767893300006641AqueousMPENLPGQPEDIINIASKAGYLKVSTDIGEIKLNSYNQVEIQPKGTVFGAKLKVEENGEVSPMITFDTKKLRDPKKDIDPKQMLDDALENFWNEQK*
Ga0070749_1008382653300006802AqueousMSIENFPEEPEDIVDIAAKAGYLKVKTDIGDIKLNSHNQIEVQPKGTPFGAKIKVEQDGNITPTLTFDTKKLREPKKKIDAKQILDDALEDFLDGQV*
Ga0070749_1029724523300006802AqueousMSIENLPEEPEDIVDIAAKAGYLKVKTDIGDIKLNSHNQIEVQPKGTPFGAKIKVEQDGNITPTLTFDTKKMREPRKQIDAKQILDDALEDFLDGQV*
Ga0070749_1059915913300006802AqueousMTIENLPQEPEDIVDIASKAGYLKFENEIGSIKLNSHNSVEMQPKGTPLGAKLKVNNDGSLTPTLTFDTKKLREPKKNLDTKKMLDDAIDDFWEQT*
Ga0102976_101562023300007169Freshwater LakeMPIQNLPDDEKDLVNIAARAGYLKVDTEIGEIKLNSYNEVEVQPEGTPFGAKVKVEQDGSITPTLTFDTKKLRDPKKHIDPKSIVDSALEDFLENNDV*
Ga0103959_118778433300007214Freshwater LakeMSFDNSPNKKDIVDIAAKAGYLKVENDTVEIKLNSYNEIEVQPKGTIFGAKIKVEEDGSITPTLTFDTKKLRDPNTYIDSKKIVDDALSNFWENNNV*
Ga0099851_1001809143300007538AqueousMSISNLPDDNEEIVDLVARAGYLKITTDVGEVKLNSHNEVEIQPKGTLFGAKIKVEENGSITPTLTFDTKKLRDKKKELDTQKLLDDALEDFWNEQS*
Ga0099848_106611943300007541AqueousMSIENLPQDQNDILDIAAKAGYLKVKTEVGDIKLNSHNSVEIQPEGTPFGAKIKVNNDGSITPTLTFDTKKLKEPRKNIDTKSILDEAINDFWEQT*
Ga0099848_116892423300007541AqueousMSIDNLPEDEKDIINIASKAGYLKVENDNIEVKLNSYNQIEIQPKETPFGVKMKVENNGSVTPTFTFDTKKIKEKKKDINVEQLIDDALEDFWDE*
Ga0099846_133922223300007542AqueousMSIENLPQDQNDILDIAAKAGYLKVKTEVGDIKLNSHNSVEIQPEGTPFGAKIKVNNDGSITPTLTFDTKKLKEPRKNIDTKSILDDAINDFWEQT*
Ga0102820_105288623300007554EstuarineMSIENLPQEPKDIIDIAARVGYLKVQTDIGEIKLNSHNSFEVQPKGTPFGAKVKMEESGNITPILTFDTKKMREPRKQIDAKQMLDDALEDFLNE*
Ga0102915_120499323300007562EstuarineMPENFPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEESGNVTPTLTFDTKKLREPKKKIDAKQMLDDALEDFFNGQV*
Ga0102901_114727913300007634EstuarineKAEYLKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEESGNITPTLTLDTKKLRESKKKIDAKQMLDDALEDFFNGQV*
Ga0114340_10000241743300008107Freshwater, PlanktonMLPPFMSIDNLPQEPEDIVNIAARAGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSITPTLTFDTKKMREPRKNINPEQILDDALEDFFNEQQ*
Ga0114340_100383013300008107Freshwater, PlanktonMSIENLPEEPEEIVDIAAKAGYLKVETDIGVIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFL
Ga0114340_104851463300008107Freshwater, PlanktonMSIENLPEEPEDIVDIAAKAGYLKVQTDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPRKQIDAKQLLDDALEDFLDEQV*
Ga0114340_112236113300008107Freshwater, PlanktonMSIENLPEEPEDIVDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFL
Ga0114341_1003034543300008108Freshwater, PlanktonMSIDNLPQEPEDIVNIAARAGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSITPTLTFDTKKMREPRKNINPEQILDDALEDFFNEQQ*
Ga0114341_1009952983300008108Freshwater, PlanktonMSIENLPEEPEDIVDIAAKAGYLKVETDIGDIKLNSHNQIEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFLDEQV*
Ga0114346_1006983233300008113Freshwater, PlanktonMSIENLPDDEKDIINLASRAGYLKVDTDIGEIKLNSYNQVELQPKGTPFGAKVKVEENGTVTPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQNQV*
Ga0114346_101439963300008113Freshwater, PlanktonMSIDNLPQEPEDIVNIAARTGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSVTPTLTFDTKKMREPRKKIDPEQILDDALEDFFNEQQ*
Ga0114351_100693233300008117Freshwater, PlanktonMSIENLPEEPEEIIDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMKEPKKKIDAKQMVDDALEDFLDEQV*
Ga0114351_1103003153300008117Freshwater, PlanktonMSIENLPDDEKDIINLASRAGYLKVDTDIGEIKLNSYNQVELQPKGTPFGAKIKVEENGDITPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQNQV*
Ga0114355_101125453300008120Freshwater, PlanktonMSIENLPEEPEEIVDIAAKAGYLKVETDIGVIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFLDEQV*
Ga0114355_105268113300008120Freshwater, PlanktonENLPDDEKDIINLASRAGYLKVDTDIGEIKLNSYNQVELQPKGTPFGAKVKVEENGTVTPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQNQV*
Ga0114355_118752313300008120Freshwater, PlanktonSIENLPEEPEEIVDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMKEPKKKIDAKQMVDDALEDFLDEQV*
Ga0102811_110723123300009024EstuarineMSIENLPQEPKDIIDIAARVGYLKVQTDIGEIQLNSHNSFEVQPKGTPFGAKVKMEESGNITPILTFDTKKMREPRKQIDAKQMLDDALEDFLNE*
Ga0105103_1002062093300009085Freshwater SedimentMPLENLPQEPEDIVDIIAKAGYLKIQTDIGDIKLNSHNSVEVQPNGTPFGVKVKVEESGNITPTLTFDTKKLREPRKKIDAKQMLDDALKDFLNE*
Ga0105103_1048531923300009085Freshwater SedimentMSIENLPEEPEDIIDIAARAGYLKVQTDIGDIKLNSHNSFEVQPKGTPFGAKIKVEESGNITPTLTFDTKKMREPRKQIDAKQMLDDALEDFLDEQV*
Ga0114918_1042431723300009149Deep SubsurfaceMPLENAPQEPEDNVDIIAKAGYLKVESDIGEIKLNSHNQIEVQPEGTLFGAKIKVEQDGNITPTFTFDTKKMRDPRKQIDAKQMLDDALEDFFNEQV*
Ga0105104_1032439923300009168Freshwater SedimentMSIENLPEEPEDIIDIAARAGYLKVQTDIGDIKLNSHNSFEVQPKGTPFGAKIKVEESGNITPTLTFDTKKMREPRKQIDAKQMLDDALEDFLNEQV*
Ga0105096_1064769113300009170Freshwater SedimentMSIENLPEEPEDIIDIAARVGYLKVQTDIGDIKLNSHNSFEVQPKGTPFGAKIKVEESGNITPTLTFDTKKMREPRKQIDAKQMLDDALEDF
Ga0127391_100478733300009450Meromictic PondLVKITVDTNDALDIVAKSGYLKVETDIGDIKLNSHNSVEIQPKGTIFGTKLKIEDSGDITPILTFDTKKLRDPRKNIDAKQMLDDALEDFFNE*
Ga0127401_101568133300009469Meromictic PondMSIENLPEEPEDIVDIAAKAGYLKVQTDIGEIKLNSHNSFEVQPKGTPFGAKVKMEESGNITPTLTFDTKKMREPRKQIDAKQMLDDALEDFFNEQV*
Ga0130030_100757623300009563Meromictic PondLVKITVDTNDALDIVAKSGYLKVETDIGDIKLNSHNSVEIQPKGTIFGTKLKIEDSGDVTPTLTFDTKKLRDPRKNIDAKQMLDDALEDFFNE*
Ga0129333_1033359923300010354Freshwater To Marine Saline GradientMSIDNLPQEPEDIVNIAARTGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSITPTLTFDTKKMREPRKKIDPEQILDDALEDFFNEQQ*
Ga0129333_1039827923300010354Freshwater To Marine Saline GradientMSIQNLPDDEKDFVNIAARAGQLKVDTEIGEIKLNSYNEIEVQPEGTIFGAKVKVEENGSITPTLTFDTKKLRDPKKHIDPKSIIDSALEDFLENNDV*
Ga0129333_1170686213300010354Freshwater To Marine Saline GradientPEEIVDIVSKSGYLKVDTELGEIKLNSSNSVEIQPDGTIFGTKIKVEEDGSITPTLTFDTKKLNEPKKNIDTKQLLDDAINDFWEGQV*
Ga0136549_1001065163300010389Marine Methane Seep SedimentMSTENLPQEPKDTNDAIDIIAISGYLKVDTDIGEIKLNSHNSIEIQPKGTPFGAQVTVEDDGSITPTLTFDTKKMREPKKNINSEEILDDALEEFLNGLE*
Ga0151620_101374033300011268FreshwaterVGSAAELPLFMSIQNLPDDEKDIVNLAARAGYLKVETDIGEVKLNSYNQIEVQPKGTPFGAKIKVEEDGSITPTLTFDTKKLRDPKKQIDPKSIVDDALENFWGDGNV*
Ga0151620_116801913300011268FreshwaterMSIENLPDNEKDIIDLASRAGYLKVSTDIGEIKLNSYNQVEIQPKGTPFGAKIKVEENGNVTPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQDQV*
Ga0157210_106801923300012665FreshwaterMPENLPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLREPKKNIDTKQLLDDAIDDFWEGQE*
Ga0164293_1003955323300013004FreshwaterMPENLPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNAVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRESKKNIDTKQLLDDAIDDFWEGQE*
Ga0181343_102518023300017766Freshwater LakeMPENFPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNAVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRESKKNIDTKQLLDDAIDDFWEGQE
Ga0181343_104170623300017766Freshwater LakeMPENFPQEPEKIVDIASKAGYFKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRESKKNIDTKQLLDDAIDDFWKGQE
Ga0181343_105242013300017766Freshwater LakeIIDIAAKAGYLKAKTDLGEIKLNSHNSVEIQPKGTPFGAKIKVNNDGSVTPTLTFDTKKLREPKKNIDTSKMLDDAINDFWEEQE
Ga0180437_10001278483300017963Hypersaline Lake SedimentMSKNLPQEPEKIIDIASKVEYLKVDTNLGEIKLNSHNSVEFQPDGTIFGTKIKVEENGNITPTLTFDTKKLEEPKNNIDNIHINKLVDDAIDDFWERA
Ga0181592_1053993223300018421Salt MarshMSIDNLPQEPEDIVNIAARAGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSITPTLTFDTKKMREPRKKIDPEQILDDALEDFFNEQQ
Ga0188851_101144833300018682Freshwater LakeMSNLSEEPEDIVDLVSKTECLKINTELGEIKLEAHNRVNIQPDETPFGIEVEVEENGNITPTLTFDTKKLREPRKNIDAKQMLDDALEDFLNEQV
Ga0211732_100136733300020141FreshwaterMNNLPEEPEHTIDLISKTECLKINTELGEIKLEAHNRVNIQPDETPFGIEIEVEESGDVTPTLTFDTKKLREPKKNIDVKQMLDDALEDFLDGQV
Ga0211726_1035881553300020161FreshwaterMAIDNLPQEPEDIVDIVARAGYLKVKTDIGEIKLNSHNQVEIQPKGTIFGAKVKVEDNGTITPTLTFDTKKLREPKKNIDTEQMLDAAIEDFWNDQQ
Ga0208084_100391423300020499FreshwaterMPENLPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRETKKNIDTKQLLDDAINDFWEGQE
Ga0208362_105735323300020558FreshwaterMPENLPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNAVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRESKKNIDTKQLLDDAIDDFWEGQE
Ga0222714_1008354033300021961Estuarine WaterMSIENLPEEPEDIVDIAAKAGYLKVKTDIGDIKLNSHNQIEVQPKGTPFGAKIKVEQDGNITPTLTFDTKKMREPRKQIDAKQILDDALEDFLDGQV
Ga0222713_1012288623300021962Estuarine WaterVLQTSPFFMSIENLPEEPEEIVDIAAKAGYLKVKTDIGDIKLNSHNSVEIQPKGTPFGAKVKVENDGSVTPTLTFDTKKLREPKKNIDTNKMLDDAIDDFWEGQV
Ga0222712_1000610983300021963Estuarine WaterMSIENLPEEPEEIVDIAAKAGYLKVKTDIGDIKLNSHNSVEIQPKGTPFGAKVKVENDGSVTPTLTFDTKKLREPKKNIDTNKMLDDAIDDFWEGQV
Ga0212031_100947333300022176AqueousMSISNLPDDNEEIVDLVARAGYLKITTDVGEVKLNSHNEVEIQPKGTLFGAKIKVEENGSITPTLTFDTKKLRDKKKELDTQKLLDDALEDFWNEQS
Ga0224502_1035367613300022218SedimentMPIENLPEEPEDIVDIAAKAGYLKVKTDIGDIKLNSHNQIEVQPKGTPFGAKIKVEQDGNITPTLTFDTKKMREPRKQIDAKQILDDALEDFLDGQV
Ga0181351_100428663300022407Freshwater LakeMPENLPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEENGNITPTLTLDTKKLRESKKNIDTKQLLDDAIDDFWEGQE
Ga0181351_105331323300022407Freshwater LakeMSIENLPEEPEDIVDIASKAGYLKVETDIGEIKLNSHNQIEIQPEGTLFGAKIKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFLNE
Ga0244775_100001261163300024346EstuarineMSIENLPQEPKDIIDIAARVGYLKVQTDIGEIKLNSHNSFEVQPKGTPFGAKVKMEESGNITPILTFDTKKMREPRKQIDAKQMLDDALEDFLNE
Ga0244775_1037513633300024346EstuarineMPENLPQEPEKIVDIAAKAEYLKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEESGNITPTLTLDTKKLRESKKKIDAKQMLDDALEDFFNGQV
Ga0255141_101472723300024351FreshwaterMSPENLPQEPEDIINIASKTGYLKVETDIGEVKLNSYNQIEIQPKGTILGAKLNVEENGEVSPMITFDTKKLKSPKKDIDPKQILDDALEDFFNEQN
Ga0255142_104670533300024352FreshwaterIINIASKTGYLKVETDIGEVKLNSYNQIEIQPKGTILGAKLNVEENGEVSPMITFDTKKLKSPKKDIDPKQILDDALEDFFNEQN
Ga0208546_105305623300025585AqueousMSIENLPDDEKDIINLASKAGYLKVSTDIGEIKLNSYNQVEIQPKGTPFGAKIKVEENGNITPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQDQV
Ga0208784_1000426153300025732AqueousMPENLPGQPEDIINIASKAGYLKVSTDIGEIKLNSYNQVEIQPKGTVFGAKLKVEENGEVSPMITFDTKKLRDPKKDIDPKQMLDDALENFWNEQK
Ga0208644_123231413300025889AqueousMSIENFPEEPEDIVDIAAKAGYLKVKTDIGDIKLNSHNQIEVQPKGTPFGAKIKVEQDGNITPTLTFDTKKLREPKKKIDAKQILDDALEDFLDGQV
Ga0209770_1037173213300027769Freshwater LakeMSIQNLPDDEKDFVNIAARAGHLKVDTEIGEIKLNSYNEIEVQPEGTIFGARVKVEENGSITPTLTFDTKKLRDPKKHIDPESIIDSALEDFLENNDV
Ga0209536_10058328653300027917Marine SedimentMSIENLPQDQNDILDIAAKAGYLKVKTEVGDIKLNSHNSVEIQPEGTPFGAKIKVNNNGSITPTLTFDTKKLKEPRKNIDTKSILDEAINDFWEQT
Ga0209536_10300112013300027917Marine SedimentMPENLPQEPEDIVDIAAKAGYLKVETELGEIKLNSHNSIEIQPNGVPFGAQVTVEDDGSITPTLTFDTKKMREPKNNINPEEIIDDALEEFFNGHE
Ga0209079_1000323293300027972Freshwater SedimentMSLENLPQEPEDIVDIIAKAGYLKIQTDIGDIKLNSHNSVEVQPNGTPFGVKVKVEESGNITPTLTFDTKKLREPRKKIDAKQMLDDALKDFLNE
(restricted) Ga0247843_112916923300028569FreshwaterMSIENLPEEPENIIDIVAKAEYLKVQTDIVDIKLNSHNSFEVQPKEMPFGAKVKVEQDGNITPTLTFDIKKLREPKKNIDPKQLLDDALEDFFK
(restricted) Ga0247841_1010026053300029286FreshwaterMSIENLPEEPENIIDIVAKAEYLKVQTDIGDIKLNSHNSFEVQPKEMPFGAKVKVEQDGNITPTLTFDIKKLREPKKNIDPKQLLDDALEDFFK
Ga0307380_1032215933300031539SoilMSNLSEEPEDIVDLVSKTECLKINTELGEIKLEAHNRVNIQPDETPFGIEVEVEEGGDITPILTFDTKKLREPRKNIDAKQMLDDALEDYLNEQV
Ga0307378_1141386823300031566SoilMNNLSEEPEDIIDLASKTEYLKINTELGEIKLEAHNRVNIQPDETPFGIKIKVEENGNITPTLTFDTKKLREPRKNIDAKQMLDDALEDFLNEQV
Ga0307377_1021639123300031673SoilMNNLSEEPEDIIDLVSKTEYLKINTELGEIKLEAYNQINIQPDKTPFGIKIEVEESGDVKPILTFDTKKLRQPKKNIDAKQILDDALEDFLNG
Ga0307377_1027132823300031673SoilMSNLSEEPEDIVDLVSKTECLKINTELGEIKLEAHNRVNIQPDETPFGIKIKVEENGNITPTLTFDTKKLREPRKNIDAKQMLDDALEDFLNEQV
Ga0315907_1005392253300031758FreshwaterMSIENLPDDEKDIINLASRAGYLKVDTDIGEIKLNSYNQVELQPKGTPFGAKIKVEENGDITPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQNQV
Ga0315907_1059626813300031758FreshwaterMSIENLPEEPEEIVDIAAKAGYLKVETDIGVIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDA
Ga0315907_1108937623300031758FreshwaterMSIENLPEEPEEIIDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMKEPKKKIDAKQMVDDALEDFLDEQV
Ga0315899_10036837233300031784FreshwaterVLLLPLFMSIENLPDDEKDIINLASRAGYLKVDTDIGEIKLNSYNQVELQPKGTPFGAKVKVEENGTVTPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQNQV
Ga0315900_1008676463300031787FreshwaterVLLLPLFMSIENLPDDEKDIINLASRAGYLKVDTDIGEIKLNSYNQVELQPKGTPFGAKIKVEENGDITPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQNQV
Ga0315900_1017640133300031787FreshwaterMSIDNLPQEPEDIVNIAARTGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSVTPTLTFDTKKMREPRKKIDPEQILDDALEDFFNEQQ
Ga0315909_10001956403300031857FreshwaterMSIENLPEEPEEIVDIAAKAGYLKVETDIGVIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFLDEQV
Ga0315909_1011265553300031857FreshwaterMSIENLPEEPEDIVDIAAKAGYLKVQTDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPRKQIDAKQLLDDALEDFLDEQV
Ga0315909_1013309563300031857FreshwaterMLPPFMSIDNLPQEPEDIVNIAARAGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSITPTLTFDTKKMREPRKNINPEQILDDALEDFFNEQQ
Ga0315904_1020555913300031951FreshwaterMSIENLPEEPEEIVDIAAKAGYLKVETDIGVIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFLDEQ
Ga0315904_1122769823300031951FreshwaterMSIENLPEEPEEIIDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMKEPKKKIDAKQMVDDALED
Ga0315901_1000166313300031963FreshwaterMSIENLPEEPEDIVDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALE
Ga0315901_10087005153300031963FreshwaterLLLPLFMSIENLPDDEKDIINLASRAGYLKVDTDIGEIKLNSYNQVELQPKGTPFGAKVKVEENGTVTPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQNQV
Ga0315901_1019264213300031963FreshwaterLLLPLFMSIENLPDDEKDIINLASRAGYLKVDTDIGEIKLNSYNQVELQPKGTPFGAKIKVEENGDITPTLTFDTKKLREPKKNIDTKQLLDDALEDFWNEQNQV
Ga0315901_1039415913300031963FreshwaterMSIENLPEEPEEIVDIAAKAGYLKVETDIGVIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDAL
Ga0315274_1080428013300031999SedimentMSIENLPEEPEEIIDIAAKAGYLKVKTDIGDIKLNSHNSVEIQPKGTPFGAKVKVENDGSVTPTITFDTKKLREPKKNI
Ga0315906_1002084533300032050FreshwaterLGSAADLPFFMSIENLPEEPEDIVDIAAKAGYLKVQTDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPRKQIDAKQLLDDALEDFLDEQV
Ga0315906_1016693733300032050FreshwaterMSIENLPEEPEEIVDIAAKAGYLKVETDIGVIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDALEDFLDG
Ga0315284_1017644423300032053SedimentMSIENLPEEPEDIVDIAARAGYLKVQTNIGDIKLNSHNSFEVQPKGTPFGAKIKVEESGNITPTLTFDTKKMREPRKQIDAKQMLDDALEDFLNEQV
Ga0315903_1000189813300032116FreshwaterMSIENLPEEPEDIVDIAAKAGYLKVETDIGDIKLNSHNQIEVQPKGTPFGAKVKVEENGNITPTLTFDTKKMREPKKKIDAKQMVDDA
Ga0315281_1021950823300032163SedimentMSIENLPEEPEDIVDIAARAGYLKVKTELGEIKLNSHNSVEIQPKGTPFGAKIKVNNDGSLTPTLTFDTKKLREPKKNIDTKQLLDDALEDFLNEQV
Ga0334722_1080096013300033233SedimentGVLYSSFFMPGNLPQEPEKIVDIASKAEYLKVDTNLGEVKLNSHNSVELQPDGTIFGTKIKVEESGNITPTLTLDTKKLRESKKQIDAKQMLDDALEDFFNEQV
Ga0316621_1108902623300033488SoilVYAPPFMSIDNLPQEPEDIVNIAARAGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSITPTLTFDTKKMREPRKNINPEQILDDALEDF
Ga0316616_10329998123300033521SoilMSIDNLPQEPEDIVNIAARAGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSITPTLTFDTKKMREPRKNINPEQILDDALEDFFNEQQ
Ga0316617_10005581593300033557SoilVYAPPFMSIDNLPQEPEDIVNIAARAGYLKVETDIGEVKLNSYNQVEIQPKGTPFGTKLKVEADGSITPTLTFDTKKMREPRKNINPEQILDDALEDFFNEQQ
Ga0334996_0009644_4112_44083300033994FreshwaterMSIQNLPDDEKDFVNIAARAGHLKVDTEIGEIKLNSYDEIEVQPEGTIFGAKVKVEENGSITPTLTFDTKKLRDPKKHIDPKSIIDSALEDFLENNDV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.