NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F074735

Metagenome / Metatranscriptome Family F074735

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074735
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 52 residues
Representative Sequence MNEKKLNKKELIEAIESYEKMIRNKSLMKTFTKHMRGAFVVRLGRLNAELKRRK
Number of Associated Samples 97
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 65.25 %
% of genes near scaffold ends (potentially truncated) 37.82 %
% of genes from short scaffolds (< 2000 bps) 73.95 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (68.067 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Strait → Unclassified → Seawater
(21.008 % of family members)
Environment Ontology (ENVO) Unclassified
(72.269 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.437 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 85.19%    β-sheet: 0.00%    Coil/Unstructured: 14.81%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF01592NifU_N 4.20
PF13489Methyltransf_23 3.36
PF01521Fe-S_biosyn 1.68
PF01223Endonuclease_NS 0.84
PF10544T5orf172 0.84
PF02559CarD_CdnL_TRCF 0.84
PF05226CHASE2 0.84
PF02195ParBc 0.84
PF10614CsgF 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0822Fe-S cluster assembly scaffold protein IscU, NifU familyPosttranslational modification, protein turnover, chaperones [O] 4.20
COG0316Fe-S cluster assembly iron-binding protein IscAPosttranslational modification, protein turnover, chaperones [O] 1.68
COG4841Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF familyFunction unknown [S] 1.68
COG1864DNA/RNA endonuclease G, NUC1Nucleotide transport and metabolism [F] 0.84
COG4252Extracytoplasmic sensor domain CHASE2 (specificity unknown)Signal transduction mechanisms [T] 0.84


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.63 %
UnclassifiedrootN/A24.37 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10016238All Organisms → Viruses → Predicted Viral4511Open in IMG/M
3300000101|DelMOSum2010_c10020335All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica3890Open in IMG/M
3300000101|DelMOSum2010_c10136461All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.930Open in IMG/M
3300000116|DelMOSpr2010_c10014031Not Available4060Open in IMG/M
3300000117|DelMOWin2010_c10034611All Organisms → Viruses → Predicted Viral2411Open in IMG/M
3300001355|JGI20158J14315_10068513All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1368Open in IMG/M
3300001355|JGI20158J14315_10185468All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.604Open in IMG/M
3300002524|JGI24927J35514_1001427Not Available2867Open in IMG/M
3300003580|JGI26260J51721_1011083All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica2325Open in IMG/M
3300003617|JGI26082J51739_10088372All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.813Open in IMG/M
3300003620|JGI26273J51734_10029036All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica1987Open in IMG/M
3300003620|JGI26273J51734_10031129All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1893Open in IMG/M
3300003620|JGI26273J51734_10035615All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica1716Open in IMG/M
3300003620|JGI26273J51734_10039743Not Available1581Open in IMG/M
3300004448|Ga0065861_1025547Not Available4705Open in IMG/M
3300004829|Ga0068515_113632All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1019Open in IMG/M
3300005433|Ga0066830_10041161All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.937Open in IMG/M
3300005433|Ga0066830_10130866All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.542Open in IMG/M
3300005510|Ga0066825_10076132All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica1209Open in IMG/M
3300005837|Ga0078893_10009291Not Available59629Open in IMG/M
3300005941|Ga0070743_10004453Not Available5093Open in IMG/M
3300006752|Ga0098048_1072105All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1063Open in IMG/M
3300006752|Ga0098048_1260756Not Available505Open in IMG/M
3300006793|Ga0098055_1244238All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.676Open in IMG/M
3300006919|Ga0070746_10220607All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.895Open in IMG/M
3300007544|Ga0102861_1038947All Organisms → Viruses → Predicted Viral1221Open in IMG/M
3300007550|Ga0102880_1053336Not Available1080Open in IMG/M
3300007553|Ga0102819_1082974All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.543Open in IMG/M
3300007863|Ga0105744_1129956All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.625Open in IMG/M
3300009001|Ga0102963_1011555All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae3766Open in IMG/M
3300009003|Ga0102813_1218918All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.588Open in IMG/M
3300009024|Ga0102811_1355850All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.551Open in IMG/M
3300009050|Ga0102909_1037289All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica1234Open in IMG/M
3300009054|Ga0102826_1019201All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica1729Open in IMG/M
3300009071|Ga0115566_10076590All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica2194Open in IMG/M
3300009071|Ga0115566_10597106All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.618Open in IMG/M
3300009080|Ga0102815_10016531Not Available4132Open in IMG/M
3300009433|Ga0115545_1078658All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1219Open in IMG/M
3300009449|Ga0115558_1369452All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.563Open in IMG/M
3300009481|Ga0114932_10055616All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica2529Open in IMG/M
3300009507|Ga0115572_10098754All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica1756Open in IMG/M
3300009507|Ga0115572_10435000All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.732Open in IMG/M
3300009606|Ga0115102_10563448All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.512Open in IMG/M
3300010149|Ga0098049_1132216All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.775Open in IMG/M
3300010296|Ga0129348_1164442All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.764Open in IMG/M
3300017713|Ga0181391_1064826All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.847Open in IMG/M
3300017714|Ga0181412_1071998All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.842Open in IMG/M
3300017714|Ga0181412_1083476All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.766Open in IMG/M
3300017719|Ga0181390_1015553Not Available2572Open in IMG/M
3300017727|Ga0181401_1014281All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica2447Open in IMG/M
3300017727|Ga0181401_1059234Not Available1030Open in IMG/M
3300017729|Ga0181396_1019567All Organisms → Viruses → Predicted Viral1347Open in IMG/M
3300017730|Ga0181417_1163606Not Available536Open in IMG/M
3300017731|Ga0181416_1101920All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.685Open in IMG/M
3300017737|Ga0187218_1086278All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.759Open in IMG/M
3300017741|Ga0181421_1077348All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.872Open in IMG/M
3300017741|Ga0181421_1133234Not Available643Open in IMG/M
3300017742|Ga0181399_1110200All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.677Open in IMG/M
3300017746|Ga0181389_1160109All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.595Open in IMG/M
3300017748|Ga0181393_1184707All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.510Open in IMG/M
3300017750|Ga0181405_1046168All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1156Open in IMG/M
3300017750|Ga0181405_1066899Not Available931Open in IMG/M
3300017750|Ga0181405_1067946Not Available922Open in IMG/M
3300017750|Ga0181405_1103334All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica717Open in IMG/M
3300017751|Ga0187219_1214668Not Available527Open in IMG/M
3300017755|Ga0181411_1056213Not Available1205Open in IMG/M
3300017757|Ga0181420_1244972All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.510Open in IMG/M
3300017764|Ga0181385_1184174All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.631Open in IMG/M
3300017765|Ga0181413_1117518All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica807Open in IMG/M
3300017776|Ga0181394_1220443All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.573Open in IMG/M
3300018421|Ga0181592_11095578All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.509Open in IMG/M
3300020185|Ga0206131_10068248All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.2228Open in IMG/M
3300020352|Ga0211505_1055277All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.969Open in IMG/M
3300020374|Ga0211477_10305737Not Available535Open in IMG/M
3300020381|Ga0211476_10041233All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica1923Open in IMG/M
3300020428|Ga0211521_10018813All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica4025Open in IMG/M
3300020438|Ga0211576_10320984All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.802Open in IMG/M
3300020451|Ga0211473_10016493Not Available3589Open in IMG/M
3300020469|Ga0211577_10438692All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.801Open in IMG/M
3300021085|Ga0206677_10008221Not Available7627Open in IMG/M
3300021085|Ga0206677_10159437All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1000Open in IMG/M
3300021185|Ga0206682_10083741All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1623Open in IMG/M
3300021335|Ga0213867_1300998Not Available506Open in IMG/M
3300021365|Ga0206123_10181872All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.945Open in IMG/M
3300021368|Ga0213860_10022825All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica2604Open in IMG/M
3300021957|Ga0222717_10031047All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica3535Open in IMG/M
3300021957|Ga0222717_10040092All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica3070Open in IMG/M
3300021957|Ga0222717_10059569Not Available2455Open in IMG/M
3300021957|Ga0222717_10076251All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica2128Open in IMG/M
3300024191|Ga0228636_1022257All Organisms → Viruses → Predicted Viral1554Open in IMG/M
(restricted) 3300024255|Ga0233438_10003122Not Available15558Open in IMG/M
(restricted) 3300024264|Ga0233444_10065698All Organisms → Viruses2060Open in IMG/M
3300024328|Ga0228635_1127598All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.550Open in IMG/M
3300024348|Ga0244776_10904898All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.522Open in IMG/M
3300024359|Ga0228628_1075671All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.673Open in IMG/M
3300025070|Ga0208667_1075987All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.500Open in IMG/M
3300025103|Ga0208013_1004298Not Available5253Open in IMG/M
3300025108|Ga0208793_1146102All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.628Open in IMG/M
3300025151|Ga0209645_1057097All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica1352Open in IMG/M
3300025151|Ga0209645_1066973Not Available1220Open in IMG/M
3300025483|Ga0209557_1008598Not Available4058Open in IMG/M
3300025653|Ga0208428_1027125Not Available1851Open in IMG/M
3300025680|Ga0209306_1082447All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.977Open in IMG/M
3300025685|Ga0209095_1201269All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.550Open in IMG/M
3300025690|Ga0209505_1111796All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.764Open in IMG/M
3300025712|Ga0209305_1098477Not Available938Open in IMG/M
3300025881|Ga0209309_10370204All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.625Open in IMG/M
3300025892|Ga0209630_10308745All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.716Open in IMG/M
3300027205|Ga0208926_1040694All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.694Open in IMG/M
3300027234|Ga0208170_1032246All Organisms → Viruses → Predicted Viral1119Open in IMG/M
3300027571|Ga0208897_1116422All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.674Open in IMG/M
3300028287|Ga0257126_1079355All Organisms → Viruses → Predicted Viral1239Open in IMG/M
3300028414|Ga0228627_1115353All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.608Open in IMG/M
3300031519|Ga0307488_10397588All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica853Open in IMG/M
3300031851|Ga0315320_10080351All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Xanthomarina → Xanthomarina gelatinilytica2508Open in IMG/M
3300031851|Ga0315320_10554575All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.763Open in IMG/M
3300032277|Ga0316202_10163577All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.1034Open in IMG/M
3300032373|Ga0316204_10086764All Organisms → Viruses → Predicted Viral2718Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater21.01%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine10.08%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine10.08%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine9.24%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine6.72%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.72%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater5.04%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater4.20%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine4.20%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.36%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.52%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.68%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat1.68%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.68%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.68%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.68%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.84%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.84%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.84%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.84%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.84%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.84%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.84%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water0.84%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.84%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.84%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300002524Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_35EnvironmentalOpen in IMG/M
3300003580Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNAEnvironmentalOpen in IMG/M
3300003617Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNAEnvironmentalOpen in IMG/M
3300003620Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNAEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004829Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVsEnvironmentalOpen in IMG/M
3300005433Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45BEnvironmentalOpen in IMG/M
3300005510Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007544Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3EnvironmentalOpen in IMG/M
3300007550Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3EnvironmentalOpen in IMG/M
3300007553Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689EnvironmentalOpen in IMG/M
3300007637Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02EnvironmentalOpen in IMG/M
3300007863Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2umEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009003Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725EnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009050Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02EnvironmentalOpen in IMG/M
3300009054Estuarine microbial communities from the Columbia River estuary - metaG S.737EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009606Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017737Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020352Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)EnvironmentalOpen in IMG/M
3300020374Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)EnvironmentalOpen in IMG/M
3300020381Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300024191Seawater microbial communities from Monterey Bay, California, United States - 45DEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024328Seawater microbial communities from Monterey Bay, California, United States - 44DEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024359Seawater microbial communities from Monterey Bay, California, United States - 34DEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025483Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025680Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)EnvironmentalOpen in IMG/M
3300025685Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes)EnvironmentalOpen in IMG/M
3300025690Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)EnvironmentalOpen in IMG/M
3300025712Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300027205Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3 (SPAdes)EnvironmentalOpen in IMG/M
3300027234Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027571Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)EnvironmentalOpen in IMG/M
3300028287Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120mEnvironmentalOpen in IMG/M
3300028414Seawater microbial communities from Monterey Bay, California, United States - 33DEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300032373Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1001623863300000101MarineMNEKKLTKKELIEAIKSYERIRNNRALMNTFTKHMRGAFVVRLGRLNAELKRRK*
DelMOSum2010_1002033533300000101MarineMNEKKLNKKELIEAIESYEKMIRNKSLMKTFTKHMRGAFVVRLGRLNAELKRRK*
DelMOSum2010_1013646143300000101MarineMNEKKLNKKELIEAIESYEKMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRK*
DelMOSpr2010_10014031113300000116MarineMNEKKLTKKELIEAIKSYERIRNNRALMKTFTKHMQGAFVVRLGRLNAELKRRK*
DelMOWin2010_1003461113300000117MarineYNIIMNEKKLTKKELIEAIKSYERIRNNRALMNTFTKHMRGAFVVRLGRLNAELKRRK*
JGI20158J14315_1006851363300001355Pelagic MarineMNEKKLTKQELIKAIEGYEKVLANKSMIKTLSKFMLGAYIVRLGRLNAELKRRK*
JGI20158J14315_1018546813300001355Pelagic MarineAIEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK*
JGI24927J35514_100142773300002524MarineMNEKKLNKKELLEAIESYEKMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK*
JGI26260J51721_101108333300003580MarineMNEKKLTKQELIEAIKSYERMRNNKAFMKTFTKHMQGAFVVRLGRLNAELKRRK*
JGI26082J51739_1008837213300003617MarineMNEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRG*
JGI26273J51734_1002903633300003620MarineMNEKKLNRKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK*
JGI26273J51734_1003112953300003620MarineMNEKKLTKQELIEAIKSYERIRNNRALMNTFTKHMRGAFVVRLGRLNAELKRRG*
JGI26273J51734_1003561533300003620MarineMNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK*
JGI26273J51734_1003974353300003620MarineGVYNIIMNEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0065861_102554793300004448MarineMNEKKLTRKELIEAIKSYEKMIRNDSLMKTFTRHMRGAFVVRLGRLNAELKRRK*
Ga0068515_11363213300004829Marine WaterMNEKKLTKKELIEAIKSYERIRNNKALMKTFTKHMQGAFVVRLGRLNAELKRRK*
Ga0066830_1004116123300005433MarineMNEKKLTKKELIEAIEGYNRILNNPAMIKTLSRFMLGAYVVRLGKLNAELKRRK*
Ga0066830_1013086613300005433MarineELIKAIEGYQKVLDNPAMVKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0066825_1007613213300005510MarineMNEKKLTKKELIKAIEGYQKVLDNPAMVKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0078893_10009291433300005837Marine Surface WaterMNEKKLTKKELIKAIEGYQKVLDNPSMVKTLTRHMLGAYVVRLGRLNAELKRRK*
Ga0070743_1000445333300005941EstuarineMNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRG*
Ga0098048_107210533300006752MarineMNEKKLTKKELIEAIEGYEKILNNKAMIKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0098048_126075633300006752MarineMNEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGKLNAELKRRK*
Ga0098055_124423833300006793MarineMNEKKLNKKELIEAIKSYERIINNKATMKTFTKHMQGAFVVRLGRLNAELKRRG*
Ga0070746_1022060713300006919AqueousMNEKKLTKKELIEAIKSYERLRNNRALMKTFTKHMQGAFVVRLGRLNAELKRRK*
Ga0102861_103894723300007544EstuarineMNEKKLTKKELIEAIKGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0102880_105333613300007550EstuarineKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRG*
Ga0102819_108297413300007553EstuarineNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK*
Ga0102906_121530723300007637EstuarineEKMIRNDSLMKTFTKHMRGAFVVRLGRLNTELKRRG*
Ga0105744_112995633300007863Estuary WaterMNEKKLNKKELLEAIKSYEKMIRNDSLMKTFTKHMRGAFVVRLGRLNAELKRRG*
Ga0102963_101155563300009001Pond WaterMNEKKLTKQELIEAIKSYERIRNNKALMNTFTKHMRGAFVVRLGRLNAELKRRG*
Ga0102813_121891813300009003EstuarineRCYNIYMNEKKLNKKELLEAIESYERMIRNDSLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0102811_135585013300009024EstuarineKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRSNAELKRRG*
Ga0102909_103728933300009050EstuarineMNEKKLNRKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRG*
Ga0102826_101920133300009054EstuarineMYEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRG*
Ga0115566_1007659053300009071Pelagic MarineMNEKKLTKKELIKAIEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0115566_1059710613300009071Pelagic MarineKLTKKELIKAIEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0102815_1001653183300009080EstuarineMNEKKLNKKELLEAIESYERMIRNDSLMKTFTKHMRGAFVVRLGRLNAELKRRK*
Ga0115545_107865813300009433Pelagic MarineKKLTKKELIKAIEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0115558_136945223300009449Pelagic MarineMNEKKLTKQELIKAIEGYKKVLANKSMIKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0114932_1005561663300009481Deep SubsurfaceMNEKKLSKAELEKAIATYTKLLDNNAFIKTLTKHMHGAFVVRLGRLNAELKRRK*
Ga0115572_1009875413300009507Pelagic MarineMNEKKLTKKELIKAIEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAE
Ga0115572_1043500013300009507Pelagic MarineELIKAIEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0115102_1056344813300009606MarineELLEAIKSYEKMIRNDSLMKTFTKHMRGAFVVRLGRLNAELKRRG*
Ga0098049_113221613300010149MarineIEGYEKVIANKSMVKTLSKFMLGAYIVRLGRLNAELKRRK*
Ga0129348_116444233300010296Freshwater To Marine Saline GradientMNEKKLTKQELIKAIEGYQKVLDNPAMVKTLSKFMLGAYVVRLGKLNAELKRRK*
Ga0181391_106482613300017713SeawaterMNEKKLTKKELIEAIKGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKRRKK
Ga0181412_107199823300017714SeawaterMNEKKLNKKELLEAIKSYEKMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0181412_108347613300017714SeawaterMNEKKLTKKELIEAIEGFEKILNNKAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0181390_101555383300017719SeawaterMNEKKLTKKELIEAIKGYENVLNSPAMIKTLSKFMLGAYIVRLGRLNAELKRRKK
Ga0181401_101428163300017727SeawaterMKEKKLTKKELIEAIEGFEKILNNKAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0181401_105923413300017727SeawaterMNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0181396_101956713300017729SeawaterKNMNEKKLTKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0181417_116360613300017730SeawaterMNEKKLTKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAE
Ga0181416_110192013300017731SeawaterMNEKKLTKKELIEAIKGYENVLNSPAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0187218_108627833300017737SeawaterMNEKKLTKKELIEAIEGFEKILNNKAMIKTLSKFMLGAYIVRLG
Ga0181421_107734813300017741SeawaterEVYNIIMNEKKLTKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0181421_113323423300017741SeawaterMNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGKLNAELKRRK
Ga0181399_111020013300017742SeawaterIIMNEKKLTKKELIEAIEGFEKILNNKAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0181389_116010913300017746SeawaterKELIEAIKGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0181393_118470723300017748SeawaterMLNKKELLEAIESYERMIRNKSLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0181405_104616843300017750SeawaterMNEKKLTKKELIEAIKGYENVLNSPAMIKTLSKFMLGAYIVRLGRLNAELKRRG
Ga0181405_106689913300017750SeawaterKLNKKELLEAIKSYEKMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0181405_106794633300017750SeawaterMNEKKLNKKELLEAIKSYEKMIRNDSLMKTFTKHMRGAFVVRLGRLNAELKR
Ga0181405_110333423300017750SeawaterMNEKKLNKKELLEAIKSYEKMIRNESLMKTFTKHMRGAFVVRLGR
Ga0187219_121466813300017751SeawaterMNEKKLNKKELLEAIKSYEKMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0181411_105621343300017755SeawaterCYNIYMNEKKLNKKELLEAIKSYEKMIRNDSLMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0181420_124497233300017757SeawaterKKELLEAIESYEKMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0181385_118417413300017764SeawaterIMNEKKLTKKELIEAIEGFEKILNNKAMIKTLSKFMLGAYIVRLGRLNAELKRRKK
Ga0181413_111751833300017765SeawaterGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKRRKYVIDK
Ga0181394_122044313300017776SeawaterKLTKKELIEAIEGFEKILNNKAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0181592_1109557813300018421Salt MarshMNEKKLTKKELIKAIEGYQRVLDNPAMVKTLSKFMLGAYVVRLGKLNAELKRRK
Ga0206131_1006824853300020185SeawaterMNEKKLTKQELIKAIEGYEKVLANKSMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0211505_105527733300020352MarineMNEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0211477_1030573723300020374MarineMNEKKLNKAELEKAIATYTKLLDNNAFIKTLTKHMHGAFVVRLGRLNAELKRRK
Ga0211476_1004123323300020381MarineMNEKKLSKAELEKAIATYTRLLDNNAFIKTLTKHMHGAFVVRLGRLNAELKRRK
Ga0211521_1001881313300020428MarineMNEKKLSKAELEKAIATYTKLLDNNAFIKTLTKHMHGAFVVRLGRLNAELKRRK
Ga0211576_1032098413300020438MarineMNEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0211473_1001649353300020451MarineMNEKKLSKAELEKAIATYTKLLDNNAFTKTLTKHMHGAFVVRLGRLNAELKRRK
Ga0211577_1043869213300020469MarineMNEKKLTKKELIEAIKGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0206677_10008221123300021085SeawaterMNEKKLNKKELLEAIKSYEKMIRNDSLMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0206677_1015943743300021085SeawaterMNEKKLNKKELLEAIESYEKMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0206682_1008374113300021185SeawaterMNEKKLTKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0213867_130099823300021335SeawaterMNEKKLTKKELIEAIKSYERIRNNRALMNTFTKHMRGAFVVRLGRLNAELKRRK
Ga0206123_1018187213300021365SeawaterNLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0213860_1002282533300021368SeawaterMNEKKLTKQELIKAIEGYQKVLDNPAMVKTLSKFMLGAYVVRLGKLNAELKRRK
Ga0222717_1003104733300021957Estuarine WaterMNEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGKLNAELKRRK
Ga0222717_1004009213300021957Estuarine WaterMNEKKLTKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRR
Ga0222717_1005956923300021957Estuarine WaterMNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0222717_1007625133300021957Estuarine WaterMNEKKLTKQELIEAIKSYERIRNNKALMNTFTKHMRGAFVVRLGRLNAELKRRG
Ga0228636_102225713300024191SeawaterMNEKKLTKKELIEAIKGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKRR
(restricted) Ga0233438_10003122333300024255SeawaterMNEKKLTKQELIEAIKSYERIRNNRALMNTFTKHMRGAFVVRLGRLNAELKRRG
(restricted) Ga0233444_1006569813300024264SeawaterMNEKKLNRKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0228635_112759813300024328SeawaterMNEKKLTKKELIEAIKGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKR
Ga0244776_1090489813300024348EstuarineRCYNIYMNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0228628_107567133300024359SeawaterIEAIKGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0208667_107598713300025070MarineMNEKKLTKKELIEAIEGYEKILNNKAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0208013_100429883300025103MarineMNEKKLTKKELIKAIEGYEKGIANKSMVKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0208793_114610223300025108MarineMNEKKLNKKELIEAIKSYERIINNKATMKTFTKHMQGAFVVRLGRLNAELKRRG
Ga0209645_105709733300025151MarineMNEKKLTKKELIEAIEGYNRILNNPAMIKTLSRFMLGAYVVRLGKLNAELKRRK
Ga0209645_106697313300025151MarineMNEKKLTKKELIKAIEGYQKVLDNPAMVKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0209557_100859833300025483MarineMNEKKLTKQELIEAIKSYERMRNNKAFMKTFTKHMQGAFVVRLGRLNAELKRRK
Ga0208428_102712553300025653AqueousMNEKKLTKKELIEAIKSYERIRNNRALMKTFTKHMQGAFVVRLGRLNAELKRRK
Ga0209306_108244713300025680Pelagic MarineIEGYEKVLANKSMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0209095_120126923300025685Pelagic MarineMNEKKLTKQELIKAIEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0209505_111179633300025690Pelagic MarineMNEKKLTKKELIKAIEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0209305_109847713300025712Pelagic MarineEGYENLINNKALVKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0209309_1037020413300025881Pelagic MarineMNEKKLTKKELIEAIKSYEKIRNNRALMRTFTKHMQGAFVVRLGRLNAELKRRK
Ga0209630_1030874523300025892Pelagic MarineGYEKVLANKSMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0208926_104069433300027205EstuarineGVYNIIMNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0208170_103224643300027234EstuarineMNEKKLNKKELLEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0208897_111642213300027571EstuarineCYNIYMNEKKLNKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0257126_107935513300028287MarineMNEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKR
Ga0228627_111535333300028414SeawaterLIEAIKGYENVLSSPAMIKTLSKFMLGAYIVRLGRLNAELKRRK
Ga0307488_1039758833300031519Sackhole BrineMNEKKLNKKELIEAIESYERMIKSNGLMKTFTKHMRGAFVVRLGRLNAELKRRK
Ga0315320_1008035133300031851SeawaterMNEKKLTKKELLEAIESYERMIRNESLMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0315320_1055457533300031851SeawaterVYNIIMNEKKLNKKELIEAIESYERMIRNKSMMKTFTKHMRGAFVVRLGRLNAELKRRG
Ga0316202_1016357743300032277Microbial MatLTKKELIEAIKSYERIRNNRALMNTFTKHMRGAFVVRLGRLNAELKRRK
Ga0316204_1008676463300032373Microbial MatMNEKKLTKKELIEAIKSYERIRNNRALMNTFTKHMRGAFVVRLGRLN


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