NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F074714

Metagenome / Metatranscriptome Family F074714

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074714
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 44 residues
Representative Sequence MSSVTLRMLPPAGLLARLKRAGGDAGSLRLIERHARVYRHAWLVF
Number of Associated Samples 106
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.03 %
% of genes near scaffold ends (potentially truncated) 99.16 %
% of genes from short scaffolds (< 2000 bps) 89.92 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.160 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(31.933 % of family members)
Environment Ontology (ENVO) Unclassified
(30.252 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.622 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.21%    β-sheet: 0.00%    Coil/Unstructured: 54.79%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF01061ABC2_membrane 87.39
PF00005ABC_tran 5.88
PF13304AAA_21 2.52
PF04138GtrA 1.68
PF14016DUF4232 0.84
PF08281Sigma70_r4_2 0.84



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.16 %
UnclassifiedrootN/A0.84 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10228770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii613Open in IMG/M
3300001356|JGI12269J14319_10147882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1014Open in IMG/M
3300001356|JGI12269J14319_10187600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia829Open in IMG/M
3300003219|JGI26341J46601_10011729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2870Open in IMG/M
3300004091|Ga0062387_101261319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii582Open in IMG/M
3300004091|Ga0062387_101530576All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii536Open in IMG/M
3300005332|Ga0066388_101625143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus1139Open in IMG/M
3300005467|Ga0070706_100296315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1509Open in IMG/M
3300005468|Ga0070707_100098846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2827Open in IMG/M
3300005529|Ga0070741_11188991All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii644Open in IMG/M
3300005530|Ga0070679_100830994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii867Open in IMG/M
3300005533|Ga0070734_10130484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1465Open in IMG/M
3300005561|Ga0066699_10408512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii972Open in IMG/M
3300005564|Ga0070664_100146640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2081Open in IMG/M
3300005610|Ga0070763_10145213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1234Open in IMG/M
3300005712|Ga0070764_10751241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii604Open in IMG/M
3300005842|Ga0068858_101066773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia793Open in IMG/M
3300005921|Ga0070766_10054689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2254Open in IMG/M
3300006755|Ga0079222_11350491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii655Open in IMG/M
3300006904|Ga0075424_100475796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1334Open in IMG/M
3300010043|Ga0126380_10644529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii842Open in IMG/M
3300010876|Ga0126361_10358207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii553Open in IMG/M
3300010876|Ga0126361_11168917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii536Open in IMG/M
3300011107|Ga0151490_1838730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii639Open in IMG/M
3300012210|Ga0137378_10507645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1113Open in IMG/M
3300012351|Ga0137386_10239567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1304Open in IMG/M
3300012357|Ga0137384_10326021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1274Open in IMG/M
3300012359|Ga0137385_10964937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii704Open in IMG/M
3300012514|Ga0157330_1078892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii524Open in IMG/M
3300012951|Ga0164300_10019229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2333Open in IMG/M
3300012987|Ga0164307_11220873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii624Open in IMG/M
3300013307|Ga0157372_12146485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii642Open in IMG/M
3300014157|Ga0134078_10517247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii558Open in IMG/M
3300015356|Ga0134073_10071406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii974Open in IMG/M
3300015373|Ga0132257_101362015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii902Open in IMG/M
3300016319|Ga0182033_10210319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1554Open in IMG/M
3300016371|Ga0182034_11416418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii608Open in IMG/M
3300017959|Ga0187779_11271472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii520Open in IMG/M
3300017970|Ga0187783_10856832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii655Open in IMG/M
3300018060|Ga0187765_10383083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii864Open in IMG/M
3300018060|Ga0187765_10965247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii582Open in IMG/M
3300018062|Ga0187784_10687475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii819Open in IMG/M
3300018085|Ga0187772_10861896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii656Open in IMG/M
3300021180|Ga0210396_10217278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus1705Open in IMG/M
3300021403|Ga0210397_10982874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii655Open in IMG/M
3300021405|Ga0210387_10501775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1078Open in IMG/M
3300021405|Ga0210387_11180391All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii665Open in IMG/M
3300021407|Ga0210383_11152405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii653Open in IMG/M
3300021420|Ga0210394_11378114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii600Open in IMG/M
3300021477|Ga0210398_10074113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2766Open in IMG/M
3300021478|Ga0210402_10385262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1301Open in IMG/M
3300021479|Ga0210410_10458125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1140Open in IMG/M
3300021860|Ga0213851_1034693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii881Open in IMG/M
3300022528|Ga0242669_1059718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii670Open in IMG/M
3300026489|Ga0257160_1054581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii693Open in IMG/M
3300026557|Ga0179587_10602266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii723Open in IMG/M
3300027080|Ga0208237_1071949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii505Open in IMG/M
3300027096|Ga0208099_1040748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii666Open in IMG/M
3300027371|Ga0209418_1036294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii863Open in IMG/M
3300027504|Ga0209114_1008556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1530Open in IMG/M
3300027648|Ga0209420_1152396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii633Open in IMG/M
3300027696|Ga0208696_1248197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii553Open in IMG/M
3300027703|Ga0207862_1024821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1795Open in IMG/M
3300027853|Ga0209274_10367248All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii742Open in IMG/M
3300027853|Ga0209274_10497495All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii631Open in IMG/M
3300027895|Ga0209624_10430388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii880Open in IMG/M
3300027895|Ga0209624_10906383All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii575Open in IMG/M
3300027905|Ga0209415_11133568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii505Open in IMG/M
3300028906|Ga0308309_11816075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii515Open in IMG/M
3300029943|Ga0311340_10298038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1538Open in IMG/M
3300030906|Ga0302314_10061196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5439Open in IMG/M
3300031543|Ga0318516_10724718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii564Open in IMG/M
3300031544|Ga0318534_10682018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii581Open in IMG/M
3300031680|Ga0318574_10527442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii692Open in IMG/M
3300031681|Ga0318572_10027512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2923Open in IMG/M
3300031682|Ga0318560_10245402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii961Open in IMG/M
3300031708|Ga0310686_104075489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii799Open in IMG/M
3300031708|Ga0310686_106950162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1033Open in IMG/M
3300031708|Ga0310686_108452906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1014Open in IMG/M
3300031708|Ga0310686_110697914All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii542Open in IMG/M
3300031715|Ga0307476_10141199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae1725Open in IMG/M
3300031719|Ga0306917_11031872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii642Open in IMG/M
3300031744|Ga0306918_11064478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii627Open in IMG/M
3300031751|Ga0318494_10688260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii598Open in IMG/M
3300031765|Ga0318554_10132834All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300031765|Ga0318554_10375375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii808Open in IMG/M
3300031777|Ga0318543_10411933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii606Open in IMG/M
3300031796|Ga0318576_10036303Not Available2074Open in IMG/M
3300031797|Ga0318550_10477541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii602Open in IMG/M
3300031799|Ga0318565_10312538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii763Open in IMG/M
3300031799|Ga0318565_10539981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii562Open in IMG/M
3300031819|Ga0318568_10238234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1126Open in IMG/M
3300031823|Ga0307478_10978801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii707Open in IMG/M
3300031832|Ga0318499_10248905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii690Open in IMG/M
3300031835|Ga0318517_10166215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii989Open in IMG/M
3300031846|Ga0318512_10212004All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii949Open in IMG/M
3300031879|Ga0306919_10514729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii923Open in IMG/M
3300031910|Ga0306923_12252422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii545Open in IMG/M
3300031912|Ga0306921_11402445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii768Open in IMG/M
3300031912|Ga0306921_12345586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii558Open in IMG/M
3300031947|Ga0310909_10070141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2751Open in IMG/M
3300031962|Ga0307479_12118141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii510Open in IMG/M
3300032008|Ga0318562_10322109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii898Open in IMG/M
3300032010|Ga0318569_10238496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii844Open in IMG/M
3300032043|Ga0318556_10290314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii855Open in IMG/M
3300032063|Ga0318504_10080542All Organisms → cellular organisms → Bacteria1429Open in IMG/M
3300032066|Ga0318514_10362030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii769Open in IMG/M
3300032067|Ga0318524_10791783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii501Open in IMG/M
3300032076|Ga0306924_10595370All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300032089|Ga0318525_10119806All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300032091|Ga0318577_10417001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii641Open in IMG/M
3300032180|Ga0307471_101448451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii846Open in IMG/M
3300032770|Ga0335085_10856941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii994Open in IMG/M
3300032805|Ga0335078_10122550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3717Open in IMG/M
3300032829|Ga0335070_11988426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii523Open in IMG/M
3300032893|Ga0335069_10367853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1695Open in IMG/M
3300032896|Ga0335075_10029262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia7980Open in IMG/M
3300033134|Ga0335073_12086921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii514Open in IMG/M
3300033290|Ga0318519_10121014All Organisms → cellular organisms → Bacteria1433Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil31.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.88%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.04%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.04%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.04%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.20%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.20%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.36%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.68%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.68%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.68%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.84%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012514Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027080Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)EnvironmentalOpen in IMG/M
3300027096Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)EnvironmentalOpen in IMG/M
3300027371Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027504Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1022877013300000567Peatlands SoilMSSVSLRMLPPTGRLARMRRAGSDVGSLRLIERHAR
JGI12269J14319_1014788213300001356Peatlands SoilMSESVSLRMLPPAGLLTRLRRAGTDTGSLRLIERHARAYRR
JGI12269J14319_1018760023300001356Peatlands SoilMSSMPLRMLPPTGRLARLRQAGRDAGSLHLIERHARAYGHAWLVFASGVF
JGI26341J46601_1001172953300003219Bog Forest SoilMSSVSLRMLPPTGRLARLRRAGSDMGSLRLIERHARAYRHAWLVF
Ga0062387_10126131913300004091Bog Forest SoilMSSVSLRMLPPTGRLARLERADGDVGSLRLIERHVRVYRH
Ga0062387_10153057623300004091Bog Forest SoilMSDMTLRVLPPAGRLARLRRADADRGSLRLIERHARVYRHA
Ga0066388_10162514313300005332Tropical Forest SoilMSSVTLRMLPPAGLLTRLRQAGSDVGSLRLIERHARVYRHAWLVF
Ga0070706_10029631513300005467Corn, Switchgrass And Miscanthus RhizosphereMASVTLRMLPPAGRLARLRRAGGDVGSLRLIERHARVYRHAWL
Ga0070707_10009884653300005468Corn, Switchgrass And Miscanthus RhizosphereMSSATLRMLPPAGTLARLRRAGGDVGSLRLIERHARVYRHAWL
Ga0070741_1118899123300005529Surface SoilMSSVTSRVLPPAGRMLPPAGRLARLRRAGTDAGSLRLIERHARAYRHAWL
Ga0070679_10083099423300005530Corn RhizosphereMSSVSLRMLPPAGLLGRLKRAGTEAGSLRLIERHARAYRHAWLVFAS
Ga0070734_1013048433300005533Surface SoilMSETVTFRMLPPAGPLARLKRAGTDTGSLRLIERHA
Ga0066699_1040851213300005561SoilMSSATLRMLPPAGLLARLKRTGGDAGSLRLIERHAKVYRHAW
Ga0070664_10014664013300005564Corn RhizosphereMSSVTLRMLPPAGLLGRLKRAGTEAGSLRLIERHARAYRHAWLVFAS
Ga0070763_1014521333300005610SoilMSEAVTLRMLPPAGRLGRLRRAGTDTGSLRLIERHARAYRRAWL
Ga0070764_1075124123300005712SoilMSESVALRMLPPAGLLARLKRTGTDTGSLRLIERHAQAYRR
Ga0068858_10106677313300005842Switchgrass RhizosphereMSSATLRMLPPAGLLARLKRTGGDAGSLRLIERHAKVYRHAWLVFASGVFEPL
Ga0070766_1005468943300005921SoilMSDMTLRVLPPAGRLARLRQGGADGASVRLIERHARVYRHAWMVFLSG
Ga0079222_1135049113300006755Agricultural SoilMSSVTLRMLPPAGLLARLKRAGGDAGSLRLIERHARVYRHAWLVFAS
Ga0075424_10047579633300006904Populus RhizosphereMSSVALRMLPPAGLLGRLKRAGTEAGSLRLIERHARAYRHAWLVFA
Ga0126380_1064452923300010043Tropical Forest SoilMLPPAGLLARLRRAGGDAGSLRLIERHARVYRHAWLVFASG
Ga0126361_1035820713300010876Boreal Forest SoilMLPPAGRLARLRRASQVSHDGGSLRLIERHARVYGHTWLV
Ga0126361_1116891723300010876Boreal Forest SoilMLPPTGRLAHLRRAGSDVGSLRLIERHARVYRHAWLVFASGVFEP
Ga0151490_183873013300011107SoilMLPPAGLLARLKRAGGDAGSLRLIERHARVYRHAWLVFA
Ga0137378_1050764533300012210Vadose Zone SoilMSSVTLRMLPPTGRLARLRRTGGDAGSLRLIERHVRVYRHAWLVF
Ga0137386_1023956733300012351Vadose Zone SoilMLPPAGLLARLKRAGGDVGSLRLIERHARVYRHAWLVFAS
Ga0137384_1032602113300012357Vadose Zone SoilMLPPAGLLARLKRAGGDAGSLRLIERHARVYRHAWLVFASG
Ga0137385_1096493713300012359Vadose Zone SoilMSSLTLRMLPPTGRLKRLRRAGPKNSDVGSLRLIERHVRVYR
Ga0157330_107889213300012514SoilMSSVTLRMLPPAGLLARLKRAGGDTGSLRLIERHARVYRHAWLV
Ga0164300_1001922913300012951SoilMLPPAGLLAGLKRAGGDAGSLRLIERDARVYGQVWVVFAAGGFEPL
Ga0164307_1122087313300012987SoilMSSVTLRMLPPAGLLARLKRAGGDAGSLRLIERHARVYRHAW
Ga0157372_1214648513300013307Corn RhizosphereMSSVTLRMLPPAGLLARLKRAGGDAGSLRLIERHARVYRHAWLVFASGVFEP
Ga0134078_1051724723300014157Grasslands SoilMSSVTLRMLPPAGLLARLKRAGGDAGSLRLIERHARVYRHAWLVF
Ga0134073_1007140613300015356Grasslands SoilMLPPAGLLARLKRAGGDAGSLRLIERHIRVYRHAWLVFASGV
Ga0132257_10136201523300015373Arabidopsis RhizosphereMLPPAGLLARLKRAGTDAGSLRLIERHARVYQHAWLVF
Ga0182033_1021031913300016319SoilMSSVSYRMLPSAGRLTRLRHIGTDVGSLRLIERHARAYG
Ga0182034_1141641813300016371SoilMSSATLRMLPPTGRLAQLKRAGGDAGSLRLIERHARVYRHAWLV
Ga0187779_1127147213300017959Tropical PeatlandMSSVPLRMMPPTGLLGRLKRAGGDAGSIRLIERHARV
Ga0187783_1085683213300017970Tropical PeatlandMSSLTLRMLPPAGRLARLRQAGREAGGLHLIERHARA
Ga0187765_1038308313300018060Tropical PeatlandMSSATLRMLPPAGRLKRIQRAGGDVSSLRLVERHARVYRHAWLVF
Ga0187765_1096524713300018060Tropical PeatlandMSSVSLRVLPPTGRLARLRQSGTDVGSLRLIERHARVYRHA
Ga0187784_1068747513300018062Tropical PeatlandMSSVSLRMLPPTGQLARLRRAGTEVGSLRLIERHAL
Ga0187772_1086189623300018085Tropical PeatlandMSETVSLRMLPPTGLLARLRRAGTDTGSLRLIERHARAYRR
Ga0210396_1021727813300021180SoilMSSATLRMLPPTGRLARLRRAGGDAGSLRLIERHARVYRHAWLVFASGI
Ga0210397_1098287423300021403SoilMSESVALRMLPPTGRLARLKRAGTETGSLRLIERHAL
Ga0210387_1050177533300021405SoilMSSVTLRVLPPTGLLARLRRAGTETGSLRLIERHARAYRRAWLVFISGVF
Ga0210387_1118039123300021405SoilMSSVSLRMLPPTGRLARLERADGDVGSLRLIERHIRVYRHAWLIF
Ga0210383_1115240523300021407SoilMSSVTLRMLPPAGLLARLKRAGTDTGSLRLIERHARAYRRAWLVFIS
Ga0210394_1137811423300021420SoilMSSVSLRMLPPTGRLARLERADGDIGSLRLIERHV
Ga0210398_1007411313300021477SoilMSESVALRMLPPAGLLARLKRTGTDTGSLRLIERHAQA
Ga0210402_1038526213300021478SoilMSSVTLRMLPPTGRLARLRRAGGDAGSLRLIERHARVYRHTWLVFAS
Ga0210410_1045812513300021479SoilMSESVALRMLPPAGLLARLKRTGTDTGSLRLIERHAQAY
Ga0213851_103469313300021860WatershedsMSSVSLRVLPPTGRLARLRRTSSDVGSLRLIERHA
Ga0242669_105971813300022528SoilMSESVALRMLPPAGLLARLKRTGTDTGSLRLIERHAQAYRRAWLVFISGIF
Ga0257160_105458113300026489SoilMSSVTLRMLPPTGRLTRLRRAGGDAGSLRLIERHARVYRHAWLVFAS
Ga0179587_1060226623300026557Vadose Zone SoilMSSVTLRMLPPTGRLTRLRRAGGDAGSLRLIERHARVYRHAWLVF
Ga0208237_107194913300027080Forest SoilMSDMTLRVLPPAGRLARLRQGGADGASVRLIERHARVYRH
Ga0208099_104074813300027096Forest SoilMSEGLTLRVLPPAGLQARLRRAGTDTGSLRLIERHARAYRNAWLVFISGVF
Ga0209418_103629423300027371Forest SoilMSSVTLRMLPPAGLLARLKRAGGDAGSLRLIERHARVYRHAWLVFASG
Ga0209114_100855613300027504Forest SoilMSEQSMAEGLTLRMLPPAGRLRRLARGEAGSLRLIERHARA
Ga0209420_115239623300027648Forest SoilMSDMTLRMLPPAGRLARLRRAGADGASVRLIERHARVYRHAWLVFFSGIF
Ga0208696_124819723300027696Peatlands SoilMSSVSLRMLPPTGRLARMRRAGSDVGSLRLIERHARAYRH
Ga0207862_102482113300027703Tropical Forest SoilMSSVSLRVLPPTGRLARLRHVGTDVGSLRLIERHARAYGRAWLVF
Ga0209274_1036724823300027853SoilMSSVTLRMLPPAGLLARLKRAGTDTGSLRLIERHARAY
Ga0209274_1049749513300027853SoilMSEAVALRMLPPAGLLARLKRAGTDTGSLRLVERHARA
Ga0209624_1043038823300027895Forest SoilMSETVALRMLPPAGLLARLKRTGTDTGSLRLIERHARAYRRIWLLFISGVFE
Ga0209624_1090638323300027895Forest SoilMSDMTLRMLPPAGRLARLRRAGGDGASVRLIERHARVYRH
Ga0209415_1113356813300027905Peatlands SoilMSSMPLRMLPPTGRLARLRQAGRDAGSLHLIERHARAYGHAWLVFAS
Ga0308309_1181607523300028906SoilMSSATLRMLPPAGLLARLRRAGTDTGSLRLIERHARAYGRAWLVFVSGI
Ga0311340_1029803833300029943PalsaMSSVPLRMLPPTGRLARLRRAGNDANGLRLIERHAR
Ga0302314_1006119613300030906PalsaMSSVPLRMLPPTGRLARLRGAGNDANGLRLIERHARVYRHGWLVFASGV
Ga0318516_1072471823300031543SoilMSSATLRMLPPAGQLARLKRAGGDAGSLRLIERHARVYRHAWLVF
Ga0318534_1068201823300031544SoilMSSATLRMLPPASLLRRAGTDAGSLRLIERHARVYRHAWLVFASGVFE
Ga0318574_1052744213300031680SoilMSSATLRMLPPAGRLARLRRAGSDAGSLRLVERHARVY
Ga0318572_1002751253300031681SoilMSSATIRMLPPAGLLARLKRAGGDAGSVRLIERHARVYRHAWLVFAS
Ga0318560_1024540213300031682SoilMSESVALRMLPPTGLLARLRRAGTDTGSLRLIERHARAYR
Ga0310686_10407548913300031708SoilMSDTVALRMLPPAGLLARLKRAGTETGSLRLIERHARAYR
Ga0310686_10695016213300031708SoilMSSMPLRMLPPTGRLARLRQAGRDAGSLHLIERHARAYGHAWLVFASGV
Ga0310686_10845290613300031708SoilMSDMTLRMLPPAGRLARLRRAGADGASLRLIERHARVYRHAWLVFFSGI
Ga0310686_11069791413300031708SoilMSETVALRMLPPGGLLARLKRAGTDTGSLRLIERHARAYR
Ga0307476_1014119913300031715Hardwood Forest SoilMSEVATLRMLPPAGRLARLRRAGSEPGGLRLIERHARVYRHAWVVFVSGIFEPLF
Ga0306917_1103187213300031719SoilMSSVSYRMLPPAGRLTRLRRVGTDVGSLRLIERHARAYGRAWLVFVSGIFE
Ga0306918_1106447823300031744SoilMSSLSLRMLPPAGQLKRLRRVGTDVSSLRLIERHARAYGRAWL
Ga0318494_1068826013300031751SoilMSSATLRMLPPAGLLARLKRTGGDAGSLRLIERHSRVYR
Ga0318554_1013283413300031765SoilMSSATLRMLPPTGRLAQLKRAGGDAGSLRLIERHARVYRHAWLVFASVV
Ga0318554_1037537523300031765SoilMSSGTLRMLPPTGRLTRLRRAGNDVGSLRLIERHARVYRQAWLVFA
Ga0318543_1041193313300031777SoilMLPPAGLLARLKRTGGDAGSLRLIERHARVYRHAW
Ga0318576_1003630313300031796SoilMSSATLRMLPPAGLLARLKRAGGDAGSVRLIERHARVYRHAW
Ga0318550_1047754123300031797SoilMSSATLRMLPPAGLLARLKRTGGDAGSLRLIERHARVYRHAWLVFASGV
Ga0318565_1031253813300031799SoilMSESVALRMLPPTGLLTRLRRAGTDTGSMRLIERHARAYRRAWLVFVSGIFEP
Ga0318565_1053998123300031799SoilMSSVSLRMLPPAGLLARLKRAGGDAGSLRLIERHARVY
Ga0318568_1023823413300031819SoilMSSVTLRMLPPTGRLARLRGGGDAGGSLRLIERHARVYRHAWLV
Ga0307478_1097880123300031823Hardwood Forest SoilMSETVALRMLPPAGLLARLKRAGTDTGSLRLIERHARAYRRAWLVFI
Ga0318499_1024890513300031832SoilMSSATLRMLPPTGRLAQLKRAGGDAGSLRLIERHARVYRHAWLVFASGVFE
Ga0318517_1016621523300031835SoilMSSLSLRMLPPAGQLKRLRRVGTDVSSLRLIERHARAYGRAWLLFLSGIFEPLFY
Ga0318512_1021200423300031846SoilMSSLSLRMLPPAGQLKRLRRVGTDVSSLRLIERHARAYGRAWLLF
Ga0306919_1051472923300031879SoilMSESVALRVLPPTGLLARLRRAGTDTGSMRLIERHARAYRRAWLVFIS
Ga0306923_1225242213300031910SoilMSSATLRMLPPAGRLARLRRAGSDAGSLRLVERHARV
Ga0306921_1140244523300031912SoilMSSATLRMLPPAGLLARLKRTGGDAGSLRLIERHARVYRHAWLV
Ga0306921_1234558623300031912SoilMSESLTLRVLPPAGLLARLRRAGTETGSLRLIERHARAYQRAWLVFVS
Ga0310909_1007014153300031947SoilMSSVSLRMLPPAGQLKRLRRVGTDVSSLRLIERHARAYGRAWLLF
Ga0307479_1211814123300031962Hardwood Forest SoilMSETVALRMLPPAGLLARLRRAGTDTGSLRLIERHARAYRRAWLVFISG
Ga0318562_1032210913300032008SoilMSSATLRMLPPAGLLARLKRTGGDAGSLRLIERHAR
Ga0318569_1023849613300032010SoilMSSVSYRVLPPSGRLAVLRRAGTDVGSLRLIERHARAYGRAWLVFV
Ga0318556_1029031423300032043SoilMSSATLRMLPPASLLRRAGTDAGSLRLIERHARVYRHA
Ga0318504_1008054213300032063SoilMSSATIRMLPPAGLLARLKRAGGDAGSVRLIERHARVYRHAWLVFASG
Ga0318514_1036203023300032066SoilMSSVSLRMLPPAGLLARLKRAGGDAGSLRLIERHARVYR
Ga0318524_1079178323300032067SoilMSSATLRMLPPAGLLARLKRTGGDAGSLRLIERHARVYRHAWLVFAS
Ga0306924_1059537033300032076SoilMSSATLRMLPPTGRLAQLKRAGGDAGSLRLIERHARVYRHAW
Ga0318525_1011980613300032089SoilMSSATLRMLPPAGLLARLKRAGGDAGSVRLIERHARVYRHAWLVFAS
Ga0318577_1041700123300032091SoilMSSVSYRVLPPSGRLAVLRRAGTDVGSLRLIERHARAYGRAWLVFVSG
Ga0307471_10144845123300032180Hardwood Forest SoilMSSATLRMLPPTGRLARLRREGSDAGSLRLIERHARVYRHAWLVFASG
Ga0335085_1085694113300032770SoilMSSATLRMLPPAGLLSRLKRTGGDAGSLRLIERHARVYRHAWLVFASG
Ga0335078_1012255063300032805SoilMSSATLRMLPPAGLLARLKRAGSDTGSLRLIERHARVYRHAWLVFASG
Ga0335070_1198842623300032829SoilMSSATLRMLPPTGRLVRLRRAGGDAGSLRLIERHARVYRHAWLVF
Ga0335069_1036785333300032893SoilMSSVSLRMLPPTGLLARLKRASGDAGSLRLIERHARVYRHAWLVFASG
Ga0335075_1002926213300032896SoilMSSAPLRMLPPAGLLARLRRAGTDTGSLRLIERHARVYRRAWLVFVSGI
Ga0335073_1208692113300033134SoilMSSATLRMLPPAGLLARLKRTGGDASSLRLIERHARVYRHA
Ga0318519_1012101433300033290SoilMSSATLRMLPPAGLLARLKRAGGDAGSVRLIERHARVYRHA


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